Rmu_sc0000094.1_g000006

Importin-5-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000094.1
Physical Location & Seq
Reverse (-)
17062 .. 20499
3438 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000094.1_g000006.1.cds

Sequence Viewer

Length: 1347 bp
ctgcaagttcaatatcatcaacaggtgttttctgcactgaatgccactatatatggtttgcagaatcgtcgtcttctggcacatgctgcttcagcactgcaaaaattcattgagaaatgtgctagggatatcttgacaccttatttggatgaagtgttttcccaattggttgtacttttgcagagtgagatacaaatggtgcaagtagaagcattgacagctttggcatcagttgttgtttcatttccggagcaattccaaaaatactatgaagttgtcatgattcccctgagagctatgttgttggatgccgctaataacccagtttggtccaagtccgtggcgtgtattagcttggttggtatggctgttggaaaggagaaattcagggatgatgctaagaaagtcatggaagtgctgctgtcttttcaaggatctcaaatggagccagatgatccaactgcgagttgcatgctacagatatgcgctgacctgtgcaagtgtctaggacaagatttccttccttacatgggtgctgttatgcctcctttgcttcagtttgttcaaattaagcctgttgaaactgttacctccgcaaatgacaatagtgatatggatgaatctgatgatgaaagtatggaaacaattactcttggagataaaaggattagaatcaagactagtgcattggaggaaaaagttacatcttgcaatttgctgtgttgctatgctgatgaactgaaggaaggattctttccatggatcgatcaggttgccccaacgttagttccacttatatcttatagccatgaaaaagtgaggaagtctgctgtttcagcaatgctgaagctactgcttactgcaaagttagctgtagacagagggcaagctcaaggttgtaatgaaacgtatttaaagcaattgtctgactacatcgttcgggctctggtggaagcattacctaaggaagatgattctgaaatctgcacaaagatattggatgctataaatgaatgcatacaggtctggatgcacacacacacacacgcacacagaggcgcgcacaaacacacacacacacagacatgcaaaggcatgcagtctggatcagaagtggatgtctgcaaagatgcaaaagtgtggatgcggctcagggcagtgtggacggtgctggtcttgcgggtgctgaaccaggcctccatctttagtttcttgcatgtcgagctcgaagtcgagattcaggtgcatgaagttttgggtgaacttcctgtgcggaccttcaacctcgatcactttttcctccatgatggtgccgccatccgggatgttagtggtctccgaggatag

Protein Analysis

448

Amino Acids

50.2

Weight (kDa)

5.49

Isoelectric Point (pI)

35.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1310
AccI GTMKAC 1 cut(s) 876
AccII CGCG 1 cut(s) 1061
AccIII TCCGGA 1 cut(s) 247
AciI CCGC 6 cut(s) 312, 594, 1147, 1180, 1273, 1314
AclI AACGTT 1 cut(s) 782
AclWI GGATC 4 cut(s) 442, 449, 770, 1114
AcsI RAATTY 2 cut(s) 104, 383
AcuI CTGAAG 4 cut(s) 75, 539, 761, 866
AfaI GTAC 1 cut(s) 174
AfiI CCNNNNNNNGG 2 cut(s) 530, 1320
AgsI TTSAA 5 cut(s) 11, 431, 566, 581, 1282
AhlI ACTAGT 1 cut(s) 680
AjnI CCWGG 1 cut(s) 1191
AloI GAACNNNNNNTCC 2 cut(s) 1181, 1213
AluBI AGCT 7 cut(s) 221, 296, 354, 850, 872, 890, 1225
AluI AGCT 7 cut(s) 221, 296, 354, 850, 872, 890, 1225
Alw21I GWGCWC 1 cut(s) 1227
Alw26I GTCTC 1 cut(s) 1340
AlwI GGATC 4 cut(s) 442, 449, 770, 1114
Aor13HI TCCGGA 1 cut(s) 247
AoxI GGCC 1 cut(s) 1194
ApeKI GCWGC 2 cut(s) 86, 418
ApoI RAATTY 2 cut(s) 104, 383
ArsI GACNNNNNNTTYG 2 cut(s) 127, 159
AspLEI GCGC 3 cut(s) 488, 1061, 1063
AspS9I GGNCC 2 cut(s) 330, 1275
AsuC2I CCSGG 1 cut(s) 1322
AsuHPI GGTGA 1 cut(s) 1271
AvaII GGWCC 2 cut(s) 330, 1275
AxyI CCTNAGG 1 cut(s) 963
BanI GGYRCC 1 cut(s) 1310
BanII GRGCYC 2 cut(s) 946, 1227
BbsI GAAGAC 1 cut(s) 65
Bbv12I GWGCWC 1 cut(s) 1227
BbvI GCAGC 2 cut(s) 73, 405
BccI CCATC 3 cut(s) 1208, 1301, 1325
BcgI CGANNNNNNTGC 6 cut(s) 50, 84, 454, 488, 755, 789
BciT130I CCWGG 1 cut(s) 1193
BcnI CCSGG 1 cut(s) 1322
BcoDI GTCTC 1 cut(s) 1340
BcuI ACTAGT 1 cut(s) 680
BfaI CTAG 3 cut(s) 123, 506, 681
BfmI CTRYAG 2 cut(s) 476, 873
BisI GCNGC 5 cut(s) 87, 312, 419, 1148, 1314
BlsI GCNGC 5 cut(s) 88, 313, 420, 1149, 1315
Bme1390I CCNGG 2 cut(s) 1193, 1322
Bme18I GGWCC 2 cut(s) 330, 1275
BmgT120I GGNCC 2 cut(s) 330, 1275
BmiI GGNNCC 2 cut(s) 447, 1312
BmrFI CCNGG 2 cut(s) 1193, 1322
BmrI ACTGGG 1 cut(s) 317
BmsI GCATC 7 cut(s) 236, 298, 385, 991, 1020, 1120, 1134
BmuI ACTGGG 1 cut(s) 317
BpiI GAAGAC 1 cut(s) 65
Bpu10I CCTNAGC 1 cut(s) 1151
BpuEI CTTGAG 1 cut(s) 876
BpuMI CCSGG 1 cut(s) 1322
Bsa29I ATCGAT 1 cut(s) 765
BsaBI GATNNNNATC 1 cut(s) 671
BsaI GGTCTC 1 cut(s) 1340
BsaJI CCNNGG 3 cut(s) 339, 758, 1339
BsaWI WCCGGW 1 cut(s) 247
BsaXI ACNNNNNCTCC 2 cut(s) 1181, 1211
Bsc4I CCNNNNNNNGG 2 cut(s) 530, 1320
Bse1I ACTGG 1 cut(s) 323
Bse21I CCTNAGG 1 cut(s) 963
Bse3DI GCAATG 1 cut(s) 846
Bse8I GATNNNNATC 1 cut(s) 671
BseAI TCCGGA 1 cut(s) 247
BseBI CCWGG 1 cut(s) 1193
BseCI ATCGAT 1 cut(s) 765
BseDI CCNNGG 3 cut(s) 339, 758, 1339
BseJI GATNNNNATC 1 cut(s) 671
BseLI CCNNNNNNNGG 2 cut(s) 530, 1320
BseMI GCAATG 1 cut(s) 846
BseMII CTCAG 2 cut(s) 281, 1165
BseNI ACTGG 1 cut(s) 323
BsePI GCGCGC 1 cut(s) 1059
BseXI GCAGC 2 cut(s) 73, 405
BsgI GTGCAG 2 cut(s) 18, 970
Bsh1236I CGCG 1 cut(s) 1061
BshFI GGCC 1 cut(s) 1196
BshNI GGYRCC 1 cut(s) 1310
BshVI ATCGAT 1 cut(s) 765
BsiHKAI GWGCWC 1 cut(s) 1227
BsiSI CCGG 2 cut(s) 248, 1321
BslI CCNNNNNNNGG 2 cut(s) 530, 1320
BsmAI GTCTC 1 cut(s) 1340
BsmI GAATGC 2 cut(s) 46, 1019
BsnI GGCC 1 cut(s) 1196
Bso31I GGTCTC 1 cut(s) 1340
Bsp1286I GDGCHC 2 cut(s) 946, 1227
Bsp13I TCCGGA 1 cut(s) 247
Bsp143I GATC 6 cut(s) 434, 454, 762, 766, 1106, 1288
Bsp19I CCATGG 1 cut(s) 758
BspACI CCGC 6 cut(s) 312, 594, 1147, 1180, 1273, 1314
BspANI GGCC 1 cut(s) 1196
BspCNI CTCAG 2 cut(s) 282, 1164
BspDI ATCGAT 1 cut(s) 765
BspEI TCCGGA 1 cut(s) 247
BspFNI CGCG 1 cut(s) 1061
BspHI TCATGA 1 cut(s) 279
BspLI GGNNCC 2 cut(s) 447, 1312
BspPI GGATC 4 cut(s) 442, 449, 770, 1114
BspT107I GGYRCC 1 cut(s) 1310
BspTNI GGTCTC 1 cut(s) 1340
BsrDI GCAATG 1 cut(s) 846
BsrI ACTGG 1 cut(s) 323
BssECI CCNNGG 3 cut(s) 339, 758, 1339
BssHII GCGCGC 1 cut(s) 1059
BssMI GATC 6 cut(s) 434, 454, 762, 766, 1106, 1288
BssT1I CCWWGG 1 cut(s) 758
Bst2UI CCWGG 1 cut(s) 1193
Bst4CI ACNGT 2 cut(s) 586, 1168
BstAPI GCANNNNNTGC 2 cut(s) 41, 86
BstC8I GCNNGC 4 cut(s) 473, 888, 1061, 1097
BstDEI CTNAG 4 cut(s) 290, 399, 963, 1151
BstDSI CCRYGG 2 cut(s) 339, 758
BstFNI CGCG 1 cut(s) 1061
BstHHI GCGC 3 cut(s) 488, 1061, 1063
BstKTI GATC 6 cut(s) 437, 457, 765, 769, 1109, 1291
BstMAI GTCTC 1 cut(s) 1340
BstMBI GATC 6 cut(s) 434, 454, 762, 766, 1106, 1288
BstMWI GCNNNNNNNGC 9 cut(s) 41, 86, 92, 218, 550, 836, 869, 1177, 1222
BstNI CCWGG 1 cut(s) 1193
BstNSI RCATGY 5 cut(s) 86, 475, 1089, 1099, 1220
BstSCI CCNGG 2 cut(s) 1191, 1320
BstSFI CTRYAG 2 cut(s) 476, 873
BstUI CGCG 1 cut(s) 1061
BstV1I GCAGC 2 cut(s) 73, 405
BstV2I GAAGAC 1 cut(s) 65
BstX2I RGATCY 1 cut(s) 434
BstXI CCANNNNNNTGG 1 cut(s) 340
BstYI RGATCY 1 cut(s) 434
Bsu15I ATCGAT 1 cut(s) 765
Bsu36I CCTNAGG 1 cut(s) 963
BsuRI GGCC 1 cut(s) 1196
BsuTUI ATCGAT 1 cut(s) 765
BtgI CCRYGG 2 cut(s) 339, 758
BtsI GCAGTG 2 cut(s) 95, 1164
BtsIMutI CAGTG 3 cut(s) 35, 95, 1164
Cac8I GCNNGC 4 cut(s) 473, 888, 1061, 1097
CciI TCATGA 1 cut(s) 279
CfoI GCGC 3 cut(s) 488, 1061, 1063
Cfr13I GGNCC 2 cut(s) 330, 1275
ClaI ATCGAT 1 cut(s) 765
Csp6I GTAC 1 cut(s) 173
CviQI GTAC 1 cut(s) 173
DdeI CTNAG 4 cut(s) 290, 399, 963, 1151
DpnI GATC 6 cut(s) 436, 456, 764, 768, 1108, 1290
DpnII GATC 6 cut(s) 434, 454, 762, 766, 1106, 1288
DraI TTTAAA 1 cut(s) 915
Ecl136II GAGCTC 1 cut(s) 1225
Eco130I CCWWGG 1 cut(s) 758
Eco147I AGGCCT 1 cut(s) 1196
Eco24I GRGCYC 2 cut(s) 946, 1227
Eco31I GGTCTC 1 cut(s) 1340
Eco32I GATATC 1 cut(s) 130
Eco47I GGWCC 2 cut(s) 330, 1275
Eco53kI GAGCTC 1 cut(s) 1225
Eco57I CTGAAG 4 cut(s) 75, 539, 761, 866
Eco81I CCTNAGG 1 cut(s) 963
EcoICRI GAGCTC 1 cut(s) 1225
EcoRII CCWGG 1 cut(s) 1191
EcoRV GATATC 1 cut(s) 130
EcoT14I CCWWGG 1 cut(s) 758
EcoT22I ATGCAT 1 cut(s) 1019
EcoT38I GRGCYC 2 cut(s) 946, 1227
ErhI CCWWGG 1 cut(s) 758
FalI AAGNNNNNCTT 2 cut(s) 504, 536
FauI CCCGC 1 cut(s) 1173
FblI GTMKAC 1 cut(s) 876
Fnu4HI GCNGC 5 cut(s) 87, 312, 419, 1148, 1314
FriOI GRGCYC 2 cut(s) 946, 1227
Fsp4HI GCNGC 5 cut(s) 87, 312, 419, 1148, 1314
FspBI CTAG 3 cut(s) 123, 506, 681
GlaI GCGC 3 cut(s) 487, 1060, 1062
GluI GCNGC 5 cut(s) 87, 312, 419, 1148, 1314
HaeIII GGCC 1 cut(s) 1196
HapII CCGG 2 cut(s) 248, 1321
HhaI GCGC 3 cut(s) 488, 1061, 1063
Hin6I GCGC 3 cut(s) 486, 1059, 1061
HinP1I GCGC 3 cut(s) 486, 1059, 1061
HinfI GANTC 7 cut(s) 64, 283, 620, 672, 750, 974, 1237
HpaII CCGG 2 cut(s) 248, 1321
HphI GGTGA 1 cut(s) 1271
Hpy166II GTNNAC 3 cut(s) 877, 1164, 1262
Hpy188I TCNGA 5 cut(s) 625, 928, 979, 1111, 1340
Hpy188III TCNNGA 7 cut(s) 133, 248, 280, 676, 1027, 1104, 1234
Hpy8I GTNNAC 3 cut(s) 877, 1164, 1262
Hpy99I CGWCG 1 cut(s) 72
HpyAV CCTTC 4 cut(s) 530, 736, 740, 1288
HpyCH4III ACNGT 2 cut(s) 586, 1168
HpyCH4IV ACGT 2 cut(s) 782, 908
HpyF10VI GCNNNNNNNGC 9 cut(s) 41, 86, 92, 218, 550, 836, 869, 1177, 1222
HpyF3I CTNAG 4 cut(s) 290, 399, 963, 1151
HpySE526I ACGT 2 cut(s) 782, 908
HspAI GCGC 3 cut(s) 486, 1059, 1061
Kpn2I TCCGGA 1 cut(s) 247
Kzo9I GATC 6 cut(s) 434, 454, 762, 766, 1106, 1288
LmnI GCTCC 2 cut(s) 250, 445
Lsp1109I GCAGC 2 cut(s) 73, 405
LweI GCATC 7 cut(s) 236, 298, 385, 991, 1020, 1120, 1134
MaeI CTAG 3 cut(s) 123, 506, 681
MaeII ACGT 2 cut(s) 782, 908
MaeIII GTNAC 2 cut(s) 586, 700
MalI GATC 6 cut(s) 436, 456, 764, 768, 1108, 1290
MboI GATC 6 cut(s) 434, 454, 762, 766, 1106, 1288
MboII GAAGA 2 cut(s) 65, 980
MfeI CAATTG 2 cut(s) 164, 920
MflI RGATCY 1 cut(s) 434
MhlI GDGCHC 2 cut(s) 946, 1227
MluCI AATT 8 cut(s) 104, 164, 254, 383, 567, 645, 712, 920
MmeI TCCRAC 3 cut(s) 285, 352, 482
Mph1103I ATGCAT 1 cut(s) 1019
MroI TCCGGA 1 cut(s) 247
MseI TTAA 2 cut(s) 570, 914
MslI CAYNNNNRTG 3 cut(s) 413, 1084, 1308
MspI CCGG 2 cut(s) 248, 1321
MspR9I CCNGG 2 cut(s) 1193, 1322
MunI CAATTG 2 cut(s) 164, 920
Mva1269I GAATGC 2 cut(s) 46, 1019
MvaI CCWGG 1 cut(s) 1193
MvnI CGCG 1 cut(s) 1061
MwoI GCNNNNNNNGC 9 cut(s) 41, 86, 92, 218, 550, 836, 869, 1177, 1222
NciI CCSGG 1 cut(s) 1322
NcoI CCATGG 1 cut(s) 758
NdeII GATC 6 cut(s) 434, 454, 762, 766, 1106, 1288
NlaIV GGNNCC 2 cut(s) 447, 1312
NsiI ATGCAT 1 cut(s) 1019
NspI RCATGY 5 cut(s) 86, 475, 1089, 1099, 1220
PaeI GCATGC 2 cut(s) 475, 1099
PagI TCATGA 1 cut(s) 279
PauI GCGCGC 1 cut(s) 1059
PceI AGGCCT 1 cut(s) 1196
PctI GAATGC 2 cut(s) 46, 1019
PfeI GAWTC 7 cut(s) 64, 283, 620, 672, 750, 974, 1237
PfoI TCCNGGA 1 cut(s) 1320
PkrI GCNGC 5 cut(s) 88, 313, 420, 1149, 1315
Psp124BI GAGCTC 1 cut(s) 1227
Psp1406I AACGTT 1 cut(s) 782
Psp6I CCWGG 1 cut(s) 1191
PspGI CCWGG 1 cut(s) 1191
PspN4I GGNNCC 2 cut(s) 447, 1312
PspPI GGNCC 2 cut(s) 330, 1275
PsuI RGATCY 1 cut(s) 434
PteI GCGCGC 1 cut(s) 1059
RsaI GTAC 1 cut(s) 174
RsaNI GTAC 1 cut(s) 173
RseI CAYNNNNRTG 3 cut(s) 413, 1084, 1308
SacI GAGCTC 1 cut(s) 1227
SaqAI TTAA 2 cut(s) 570, 914
SatI GCNGC 5 cut(s) 87, 312, 419, 1148, 1314
Sau3AI GATC 6 cut(s) 434, 454, 762, 766, 1106, 1288
Sau96I GGNCC 2 cut(s) 330, 1275
ScrFI CCNGG 2 cut(s) 1193, 1322
SduI GDGCHC 2 cut(s) 946, 1227
SfaNI GCATC 7 cut(s) 236, 298, 385, 991, 1020, 1120, 1134
SfcI CTRYAG 2 cut(s) 476, 873
SinI GGWCC 2 cut(s) 330, 1275
SmiMI CAYNNNNRTG 3 cut(s) 413, 1084, 1308
SmlI CTYRAG 1 cut(s) 891
SmoI CTYRAG 1 cut(s) 891
SpeI ACTAGT 1 cut(s) 680
SphI GCATGC 2 cut(s) 475, 1099
Sse9I AATT 8 cut(s) 104, 164, 254, 383, 567, 645, 712, 920
SseBI AGGCCT 1 cut(s) 1196
SsiI CCGC 6 cut(s) 312, 594, 1147, 1180, 1273, 1314
SspMI CTAG 3 cut(s) 123, 506, 681
SstI GAGCTC 1 cut(s) 1227
StuI AGGCCT 1 cut(s) 1196
StyD4I CCNGG 2 cut(s) 1191, 1320
StyI CCWWGG 1 cut(s) 758
TaaI ACNGT 2 cut(s) 586, 1168
TaiI ACGT 2 cut(s) 785, 911
TaqI TCGA 5 cut(s) 765, 1221, 1227, 1233, 1287
TasI AATT 8 cut(s) 104, 164, 254, 383, 567, 645, 712, 920
TatI WGTACW 1 cut(s) 172
TauI GCSGC 3 cut(s) 314, 1150, 1316
TfiI GAWTC 7 cut(s) 64, 283, 620, 672, 750, 974, 1237
Tru1I TTAA 2 cut(s) 570, 914
Tru9I TTAA 2 cut(s) 570, 914
TscAI CASTG 3 cut(s) 42, 102, 1164
TseI GCWGC 2 cut(s) 86, 418
TspGWI ACGGA 1 cut(s) 328
TspRI CASTG 3 cut(s) 42, 102, 1164
VpaK11BI GGWCC 2 cut(s) 330, 1275
XapI RAATTY 2 cut(s) 104, 383
XceI RCATGY 5 cut(s) 86, 475, 1089, 1099, 1220
XmiI GTMKAC 1 cut(s) 876
XspI CTAG 3 cut(s) 123, 506, 681
Zsp2I ATGCAT 1 cut(s) 1019
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.