Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0004551

Physical Location & Seq

Genomic Coordinates Reverse (-)

57206447 .. 57211712

Gene Structure 5266 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G033590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2421 bp

ATGGCGGAGTCGACTGAGCATCAGCAACTGGCGGCCATTCTCGGTCCTGAGCCCGCCGCCACTTTCCAAACCGTAATCTCCCACTTAATCTCGTCCCCCTCCTCTTTGCAAACCCTAATCTCCGACCTCATCTCCTCCGAGAAGCGGGCCGAGGCCGAGCACACCTTCAACATCTGCAAGCAGGCCGATCACGAGTCGCTTTCTCTCACACTCGCTCAGCTTCTCCAGGTCTCTCCCGACGAGAAGACCCGAGCCATGTGCTCCATTCTCCTCCGGAAGCAACTACTCACCGACGACCTGTGGCGAAGACTCTCTCCTAACACCATATCCACCCTCAAACATACTCTATTATCTTGTATTCAACGCGAGGACACCCCAACATCGATTTCGAAGGCCATCTGCTACGCCGTGTCGGAGCTCGCCTCCGCAGAGTTAGAGTTGTTGGGCGGCGAAGGCTGGCCGGAGCTCTTGCCCTTTCAGTTCCAATCCACCTCCTATGATGCGCCGCCGAAGCTTCAGGAATGCTCCTTCTTGATTTTCGATCAGCTCGCGGACTTCTTTGCCCCGTTTATAGACGAATTACACACCGTCTTCTTAAACTGCTTGAGCTCCTCCACAAGGTCAAATGAAGTTAAGATGGCCGCGTTTAGTGCGGTGGTCAGTTTCATTCGGTGTTTGTCCAGCTCTAAAGATCCGAATATGTTTCACGACGTCTTGATAGAAATGATGAGAACAGTGATGGGGGAATTGAACAAAGGGAAGGAGATCATGGCACAGGAAGCGATCAAGTTGTTCATTGAATTGGCCGGGACCCATCCGACGTTGCTCAGCCGCAACGGGCAGATCATCCGGGCTATGCTGCAGATTGCTGAAGCCATAGATGTCTTGGAACAAGGGACGAGGCACTTGGCCATTGAGTTTCTGATTACTCTGGCCGAGGCCGGAGAGCGTGCACCATGGATAATGAGGAGGTGTCGGGAGTTTGTTGGTCTACTTTTTCCCATTTTAATGAGGATGGTTTCAAATGTCAAGGATGATCCCTCATGGCATACAGCTGAGACTGATGATGACATTGCCTTGGGTGTGAGTGGTGATTACTGTGTAGGGCAGGAGTGTTTGCATAGGCTTGCCATTGCCTTGGGTGGCAATAACATTGTTCCAATTGCGTTAGAACACTTTACTTCCCATTTTGCTGCACCCGAGTGGCCCAAGCATCATGCAGCATTGATTGCCCTTGCTCAAATCGCTGAGGGTTGCTCTGAGGTAATGATAAAAGATTTGGAGCAAGTGGTGGCAATGGTTTTGAACTCCCTTGAACATCCACATATTCGGGTAAGGTGGTCAGCTATTAATGCAGTTGGCCACTTGTCTACTTATTTGGCCCCAGACCTGCAAGTTCAATATCATCAACAGGTGTTTTCTGCACTGAATGCCACTATATATGGTTTGCAGAACCGTCATCTACTGGCACATGCTGCTTCAGCACTGCAAAAATTCATTGAGAAATGTGCTAGGAATATCTTGACACCTTATTTGGATGAAGTGGTTTCCCAATTGGTTGTACTTTTGCAGGACCAATTCCAAAAATACTATGAAGATGTCATGATTCCCCTGAGAGTTATGTTGTTGGATGCCACTAATAACCCGGTTTGGTCCAAGTCCGTGGAGTGTATTAGCCTGGTTGGTATGGCTGTTGGAAAGGAGAAATTCAGGGATGATGCTAAGAAAGTCATGGAAGTGCTGATGTCTTTTCAAGGATCTCAAATGGAGCTAGATGACCCAATTGCAAGTTGCATGCTACAGATATGCGCTGACCTCTGCAAGTGTCTAGGACAAGATTTCCTTCCATACATGGGTGCTGTTATGCCTCCTTTGCTTCAGTTTGTTCAAATTAAGCCTGTTGAAACTGTTACCTCCGCAAATGACAATAGTGATATGGATGAATCTGATGATGAAAGTATGGAAACAATTACTCTTGGAGATAAAAGGATTAGAATCAAGACTAGTGTATTGGAGGAAAAAGTTACAGCTTGCAATTTGCTGTGTTGCTATGCTGATGAACTGAAGGAAGGATTCTTTCCATGGATCGATCGGGTTGCTCCAACGTTAATTCCACTTATATCTTATATCCATGAAAAAGTGCGGAAGTCTGCTGTTTCAGCAATGCCGAAGCTACTGCTTTCTGCAAAGTTAGCTATAGAGAAAAGACAAGCCCAAGGATGTAATGAAACCTATATAAAGAAATTGTCTGACCACATCCTTCCAGCTCTGGTGGAAGCATCACATCAGGAAACTGATAGAGAAATCACTGCAATAATATTGGATGCTTTAAATGAATGCATACAGATATCTGGACCACTTCGAGATGAAGCCATGTCACAGGCACTTAGTCGAGGTGATAAAGCAGGGATCACTCCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000060 GO:0001101 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0031090 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032386 GO:0032388 GO:0032879 GO:0032880 GO:0033036 GO:0033157 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0042221 GO:0042277 GO:0042306 GO:0042307 GO:0042886 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046822 GO:0046824 GO:0046907 GO:0048518 GO:0050789 GO:0050896 GO:0051049 GO:0051050 GO:0051169 GO:0051170 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0060341 GO:0065007 GO:0070013 GO:0070201 GO:0070727 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071702 GO:0071705 GO:0072594 GO:0090087 GO:0090316 GO:1900180 GO:1900182 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1903827 GO:1903829 GO:1904589 GO:1904591 GO:1904951

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HEAT HEAT_2 HEAT_EZ

Protein Analysis

806

Amino Acids

89.64

Weight (kDa)

5.15

Isoelectric Point (pI)

47.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_IPO5	PF25780	128 - 278	2.5e-18	IPO5-like, TPR repeats
Importin_rep_4	PF18808	296 - 387	7.8e-15	Importin repeat
HEAT_EZ	PF13513	402 - 456	1.8e-06	HEAT-like repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004551)

Species	Orthologous Gene IDs
malus_domestica	MD11G1005500.v1.1
rosa_chinensis	RchiOBHm_Chr5g0054081 RchiOBHm_Chr5g0054171 RchiOBHm_Chr5g0054201 RchiOBHm_Chr5g0054251
rosa_laevigata	RLG00000034915 RLG00000034916 RLG00000034918 RLG00000034920 RLG00000034921
rosa_multiflora	Rmu_sc0000094.1_g000006 Rmu_sc0000509.1_g000025 Rmu_sc0006889.1_g000007 Rmu_sc0010082.1_g000001 Rmu_sc0023670.1_g000001
rosa_roxburghii	Rroxscaffold_1G00026650 Rroxscaffold_1G00026670
rosa_rugosa	Rorug05G0285300
rosa_samantha	Rh5AG354200 Rh5AG354300 Rh5AG354700 Rh5AG355200 Rh5BG366000 Rh5BG366100 Rh5BG367300 Rh5CG390800 Rh5DG055000 Rh5DG380900 Rh5DG381500
rosa_wichuraiana	Rw5G033390 Rw5G033410 Rw5G033590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	714
Acc36I	ACCTGC	1 cut(s)	1398
AccI	GTMKAC	3 cut(s)	11, 991, 1370
AccII	CGCG	3 cut(s)	366, 551, 644
AccIII	TCCGGA	1 cut(s)	273
AclI	AACGTT	1 cut(s)	2105
AclWI	GGATC	5 cut(s)	686, 1031, 1765, 2093, 2417
AcoI	YGGCCR	7 cut(s)	33, 458, 639, 804, 909, 933, 1360
AcsI	RAATTY	2 cut(s)	1493, 1706
AcuI	CTGAAG	5 cut(s)	500, 891, 1464, 1862, 2084
AcyI	GRCGYC	1 cut(s)	711
AfaI	GTAC	1 cut(s)	1563
AfiI	CCNNNNNNNGG	3 cut(s)	144, 618, 1853
AhlI	ACTAGT	1 cut(s)	2003
AjnI	CCWGG	2 cut(s)	225, 1677
AjuI	GAANNNNNNNTTGG	2 cut(s)	370, 402
AleI	CACNNNNGTG	1 cut(s)	1201
Alw21I	GWGCWC	6 cut(s)	162, 263, 420, 468, 611, 955
Alw26I	GTCTC	2 cut(s)	235, 1052
Alw44I	GTGCAC	1 cut(s)	951
AlwI	GGATC	5 cut(s)	686, 1031, 1765, 2093, 2417
AlwNI	CAGNNNCTG	1 cut(s)	28
Ama87I	CYCGRG	2 cut(s)	249, 1199
Aor13HI	TCCGGA	1 cut(s)	273
ApaLI	GTGCAC	1 cut(s)	951
ApeKI	GCWGC	4 cut(s)	859, 1193, 1220, 1475
ApoI	RAATTY	2 cut(s)	1493, 1706
ArsI	GACNNNNNNTTYG	2 cut(s)	1516, 1548
AseI	ATTAAT	1 cut(s)	1350
AspLEI	GCGC	2 cut(s)	505, 1811
AspS9I	GGNCC	8 cut(s)	44, 147, 810, 1206, 1381, 1573, 1653, 2354
AsuC2I	CCSGG	3 cut(s)	808, 851, 1646
AsuHPI	GGTGA	3 cut(s)	280, 1103, 2408
AsuII	TTCGAA	1 cut(s)	389
AvaI	CYCGRG	2 cut(s)	249, 1199
AvaII	GGWCC	5 cut(s)	44, 810, 1573, 1653, 2354
BaeGI	GKGCMC	1 cut(s)	955
BalI	TGGCCA	2 cut(s)	911, 1362
BanII	GRGCYC	4 cut(s)	54, 420, 468, 611
BauI	CACGAG	1 cut(s)	191
BbsI	GAAGAC	3 cut(s)	251, 313, 583
Bbv12I	GWGCWC	6 cut(s)	162, 263, 420, 468, 611, 955
BbvCI	CCTCAGC	1 cut(s)	1248
BbvI	GCAGC	4 cut(s)	846, 1180, 1232, 1462
BccI	CCATC	5 cut(s)	404, 631, 733, 822, 1009
BceAI	ACGGC	1 cut(s)	392
BcgI	CGANNNNNNTGC	6 cut(s)	240, 274, 2078, 2112, 2158, 2192
BciT130I	CCWGG	2 cut(s)	227, 1679
BcnI	CCSGG	3 cut(s)	808, 851, 1646
BcoDI	GTCTC	2 cut(s)	235, 1052
BcuI	ACTAGT	1 cut(s)	2003
BfaI	CTAG	4 cut(s)	1512, 1772, 1829, 2004
BfmI	CTRYAG	3 cut(s)	860, 1799, 2196
BfuAI	ACCTGC	1 cut(s)	1398
BlpI	GCTNAGC	2 cut(s)	216, 827
Bme1390I	CCNGG	5 cut(s)	227, 808, 851, 1646, 1679
Bme18I	GGWCC	5 cut(s)	44, 810, 1573, 1653, 2354
BmeT110I	CYCGRG	2 cut(s)	249, 1199
BmgT120I	GGNCC	8 cut(s)	44, 147, 810, 1206, 1381, 1573, 1653, 2354
BmiI	GGNNCC	3 cut(s)	811, 812, 1383
BmrFI	CCNGG	5 cut(s)	227, 808, 851, 1646, 1679
BmsI	GCATC	7 cut(s)	28, 490, 1222, 1621, 1708, 2288, 2314
BpiI	GAAGAC	3 cut(s)	251, 313, 583
BplI	GAGNNNNNCTC	4 cut(s)	407, 439, 1241, 1273
BpmI	CTGGAG	1 cut(s)	209
Bpu10I	CCTNAGC	2 cut(s)	48, 1248
Bpu1102I	GCTNAGC	2 cut(s)	216, 827
Bpu14I	TTCGAA	1 cut(s)	389
BpuEI	CTTGAG	1 cut(s)	625
BpuMI	CCSGG	3 cut(s)	808, 851, 1646
Bsa29I	ATCGAT	2 cut(s)	383, 2088
BsaBI	GATNNNNATC	1 cut(s)	1994
BsaHI	GRCGYC	1 cut(s)	711
BsaI	GGTCTC	1 cut(s)	235
BsaJI	CCNNGG	8 cut(s)	150, 936, 956, 1077, 1137, 1662, 2081, 2215
BsaWI	WCCGGW	1 cut(s)	273
BsaXI	ACNNNNNCTCC	2 cut(s)	116, 146
Bsc4I	CCNNNNNNNGG	3 cut(s)	144, 618, 1853
Bse1I	ACTGG	2 cut(s)	33, 1470
Bse3DI	GCAATG	4 cut(s)	1071, 1131, 1302, 2169
Bse8I	GATNNNNATC	1 cut(s)	1994
BseAI	TCCGGA	1 cut(s)	273
BseBI	CCWGG	2 cut(s)	227, 1679
BseCI	ATCGAT	2 cut(s)	383, 2088
BseDI	CCNNGG	8 cut(s)	150, 936, 956, 1077, 1137, 1662, 2081, 2215
BseJI	GATNNNNATC	1 cut(s)	1994
BseLI	CCNNNNNNNGG	3 cut(s)	144, 618, 1853
BseMI	GCAATG	4 cut(s)	1071, 1131, 1302, 2169
BseMII	CTCAG	8 cut(s)	6, 39, 230, 841, 1047, 1239, 1251, 1604
BseNI	ACTGG	2 cut(s)	33, 1470
BseRI	GAGGAG	5 cut(s)	91, 124, 260, 601, 982
BseSI	GKGCMC	1 cut(s)	955
BseXI	GCAGC	4 cut(s)	846, 1180, 1232, 1462
BsgI	GTGCAG	2 cut(s)	1179, 1407
Bsh1236I	CGCG	3 cut(s)	366, 551, 644
Bsh1285I	CGRYCG	1 cut(s)	2092
BshVI	ATCGAT	2 cut(s)	383, 2088
BsiEI	CGRYCG	1 cut(s)	2092
BsiHKAI	GWGCWC	6 cut(s)	162, 263, 420, 468, 611, 955
BsiHKCI	CYCGRG	2 cut(s)	249, 1199
BsiSI	CCGG	6 cut(s)	274, 461, 807, 850, 942, 1646
BslFI	GGGAC	3 cut(s)	79, 823, 910
BslI	CCNNNNNNNGG	3 cut(s)	144, 618, 1853
BsmAI	GTCTC	2 cut(s)	235, 1052
BsmFI	GGGAC	3 cut(s)	79, 823, 910
BsmI	GAATGC	3 cut(s)	527, 1435, 2342
Bso31I	GGTCTC	1 cut(s)	235
BsoBI	CYCGRG	2 cut(s)	249, 1199
Bsp119I	TTCGAA	1 cut(s)	389
Bsp1286I	GDGCHC	7 cut(s)	54, 162, 263, 420, 468, 611, 955
Bsp13I	TCCGGA	1 cut(s)	273
Bsp1720I	GCTNAGC	2 cut(s)	216, 827
Bsp19I	CCATGG	2 cut(s)	956, 2081
BspCNI	CTCAG	8 cut(s)	7, 40, 229, 840, 1048, 1240, 1252, 1605
BspDI	ATCGAT	2 cut(s)	383, 2088
BspEI	TCCGGA	1 cut(s)	273
BspFNI	CGCG	3 cut(s)	366, 551, 644
BspHI	TCATGA	1 cut(s)	1602
BspLI	GGNNCC	3 cut(s)	811, 812, 1383
BspMAI	CTGCAG	1 cut(s)	864
BspMI	ACCTGC	1 cut(s)	1398
BspPI	GGATC	5 cut(s)	686, 1031, 1765, 2093, 2417
BspT104I	TTCGAA	1 cut(s)	389
BspTNI	GGTCTC	1 cut(s)	235
BsrDI	GCAATG	4 cut(s)	1071, 1131, 1302, 2169
BsrI	ACTGG	2 cut(s)	33, 1470
BssECI	CCNNGG	8 cut(s)	150, 936, 956, 1077, 1137, 1662, 2081, 2215
BssNI	GRCGYC	1 cut(s)	711
BssSI	CACGAG	1 cut(s)	191
BssT1I	CCWWGG	5 cut(s)	956, 1077, 1137, 2081, 2215
Bst2BI	CACGAG	1 cut(s)	191
Bst2UI	CCWGG	2 cut(s)	227, 1679
Bst4CI	ACNGT	6 cut(s)	73, 589, 736, 1100, 1457, 1909
BstACI	GRCGYC	1 cut(s)	711
BstAPI	GCANNNNNTGC	3 cut(s)	1229, 1430, 1475
BstBI	TTCGAA	1 cut(s)	389
BstDSI	CCRYGG	3 cut(s)	956, 1662, 2081
BstENI	CCTNNNNNAGG	1 cut(s)	616
BstFNI	CGCG	3 cut(s)	366, 551, 644
BstHHI	GCGC	2 cut(s)	505, 1811
BstMAI	GTCTC	2 cut(s)	235, 1052
BstMCI	CGRYCG	1 cut(s)	2092
BstNI	CCWGG	2 cut(s)	227, 1679
BstNSI	RCATGY	2 cut(s)	1475, 1798
BstSCI	CCNGG	5 cut(s)	225, 806, 849, 1644, 1677
BstSFI	CTRYAG	3 cut(s)	860, 1799, 2196
BstSLI	GKGCMC	1 cut(s)	955
BstUI	CGCG	3 cut(s)	366, 551, 644
BstV1I	GCAGC	4 cut(s)	846, 1180, 1232, 1462
BstV2I	GAAGAC	3 cut(s)	251, 313, 583
BstX2I	RGATCY	2 cut(s)	691, 1757
BstXI	CCANNNNNNTGG	2 cut(s)	1138, 1663
BstYI	RGATCY	2 cut(s)	691, 1757
Bsu15I	ATCGAT	2 cut(s)	383, 2088
BsuTUI	ATCGAT	2 cut(s)	383, 2088
BtgI	CCRYGG	3 cut(s)	956, 1662, 2081
BtsI	GCAGTG	2 cut(s)	1484, 2307
BtsIMutI	CAGTG	4 cut(s)	741, 1424, 1484, 2307
BveI	ACCTGC	1 cut(s)	1398
CaiI	CAGNNNCTG	1 cut(s)	28
CciI	TCATGA	1 cut(s)	1602
CfoI	GCGC	2 cut(s)	505, 1811
Cfr13I	GGNCC	8 cut(s)	44, 147, 810, 1206, 1381, 1573, 1653, 2354
ClaI	ATCGAT	2 cut(s)	383, 2088
Csp6I	GTAC	1 cut(s)	1562
CviQI	GTAC	1 cut(s)	1562
DraI	TTTAAA	1 cut(s)	2331
EaeI	YGGCCR	7 cut(s)	33, 458, 639, 804, 909, 933, 1360
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	3 cut(s)	418, 466, 609
Eco130I	CCWWGG	5 cut(s)	956, 1077, 1137, 2081, 2215
Eco24I	GRGCYC	4 cut(s)	54, 420, 468, 611
Eco31I	GGTCTC	1 cut(s)	235
Eco32I	GATATC	1 cut(s)	2349
Eco47I	GGWCC	5 cut(s)	44, 810, 1573, 1653, 2354
Eco53kI	GAGCTC	3 cut(s)	418, 466, 609
Eco57I	CTGAAG	5 cut(s)	500, 891, 1464, 1862, 2084
Eco88I	CYCGRG	2 cut(s)	249, 1199
EcoICRI	GAGCTC	3 cut(s)	418, 466, 609
EcoNI	CCTNNNNNAGG	1 cut(s)	616
EcoO109I	RGGNCCY	1 cut(s)	810
EcoRII	CCWGG	2 cut(s)	225, 1677
EcoRV	GATATC	1 cut(s)	2349
EcoT14I	CCWWGG	5 cut(s)	956, 1077, 1137, 2081, 2215
EcoT22I	ATGCAT	1 cut(s)	2342
EcoT38I	GRGCYC	4 cut(s)	54, 420, 468, 611
ErhI	CCWWGG	5 cut(s)	956, 1077, 1137, 2081, 2215
FalI	AAGNNNNNCTT	2 cut(s)	1827, 1859
FaqI	GGGAC	3 cut(s)	79, 823, 910
FauI	CCCGC	2 cut(s)	61, 138
FblI	GTMKAC	3 cut(s)	11, 991, 1370
FriOI	GRGCYC	4 cut(s)	54, 420, 468, 611
FspBI	CTAG	4 cut(s)	1512, 1772, 1829, 2004
GlaI	GCGC	2 cut(s)	504, 1810
GsuI	CTGGAG	1 cut(s)	209
HapII	CCGG	6 cut(s)	274, 461, 807, 850, 942, 1646
HhaI	GCGC	2 cut(s)	505, 1811
Hin1I	GRCGYC	1 cut(s)	711
Hin6I	GCGC	2 cut(s)	503, 1809
HinP1I	GCGC	2 cut(s)	503, 1809
HincII	GTYRAC	1 cut(s)	12
HindII	GTYRAC	1 cut(s)	12
HindIII	AAGCTT	1 cut(s)	512
HinfI	GANTC	7 cut(s)	8, 194, 309, 1606, 1943, 1995, 2073
HpaII	CCGG	6 cut(s)	274, 461, 807, 850, 942, 1646
HphI	GGTGA	3 cut(s)	280, 1103, 2408
Hpy166II	GTNNAC	4 cut(s)	12, 953, 992, 1371
Hpy188I	TCNGA	9 cut(s)	124, 139, 415, 696, 819, 924, 1261, 1948, 2251
Hpy8I	GTNNAC	4 cut(s)	12, 953, 992, 1371
Hpy99I	CGWCG	4 cut(s)	242, 296, 713, 823
HpyAV	CCTTC	9 cut(s)	175, 385, 446, 538, 754, 1853, 2059, 2063, 2270
HpyCH4III	ACNGT	6 cut(s)	73, 589, 736, 1100, 1457, 1909
HpyCH4IV	ACGT	3 cut(s)	711, 821, 2105
HpySE526I	ACGT	3 cut(s)	711, 821, 2105
Hsp92I	GRCGYC	1 cut(s)	711
HspAI	GCGC	2 cut(s)	503, 1809
KflI	GGGWCCC	1 cut(s)	810
Kpn2I	TCCGGA	1 cut(s)	273
LmnI	GCTCC	8 cut(s)	266, 415, 463, 530, 614, 1282, 1768, 2104
Lsp1109I	GCAGC	4 cut(s)	846, 1180, 1232, 1462
LweI	GCATC	7 cut(s)	28, 490, 1222, 1621, 1708, 2288, 2314
MaeI	CTAG	4 cut(s)	1512, 1772, 1829, 2004
MaeII	ACGT	3 cut(s)	711, 821, 2105
MaeIII	GTNAC	3 cut(s)	1909, 2023, 2376
MboII	GAAGA	4 cut(s)	256, 318, 583, 1607
MfeI	CAATTG	3 cut(s)	1161, 1553, 1782
MflI	RGATCY	2 cut(s)	691, 1757
MhlI	GDGCHC	7 cut(s)	54, 162, 263, 420, 468, 611, 955
MlsI	TGGCCA	2 cut(s)	911, 1362
MluNI	TGGCCA	2 cut(s)	911, 1362
MlyI	GAGTC	3 cut(s)	17, 203, 303
MmeI	TCCRAC	6 cut(s)	147, 393, 842, 1608, 1675, 2126
Mox20I	TGGCCA	2 cut(s)	911, 1362
Mph1103I	ATGCAT	1 cut(s)	2342
MroI	TCCGGA	1 cut(s)	273
MscI	TGGCCA	2 cut(s)	911, 1362
MseI	TTAA	8 cut(s)	86, 596, 633, 1007, 1350, 1893, 2108, 2330
MslI	CAYNNNNRTG	3 cut(s)	1007, 1201, 1736
Msp20I	TGGCCA	2 cut(s)	911, 1362
MspA1I	CMGCKG	1 cut(s)	1055
MspI	CCGG	6 cut(s)	274, 461, 807, 850, 942, 1646
MspR9I	CCNGG	5 cut(s)	227, 808, 851, 1646, 1679
MunI	CAATTG	3 cut(s)	1161, 1553, 1782
Mva1269I	GAATGC	3 cut(s)	527, 1435, 2342
MvaI	CCWGG	2 cut(s)	227, 1679
MvnI	CGCG	3 cut(s)	366, 551, 644
NciI	CCSGG	3 cut(s)	808, 851, 1646
NcoI	CCATGG	2 cut(s)	956, 2081
NlaIV	GGNNCC	3 cut(s)	811, 812, 1383
NmeAIII	GCCGAG	3 cut(s)	175, 181, 961
NmuCI	GTSAC	1 cut(s)	2376
NsiI	ATGCAT	1 cut(s)	2342
NspI	RCATGY	2 cut(s)	1475, 1798
NspV	TTCGAA	1 cut(s)	389
OliI	CACNNNNGTG	1 cut(s)	1201
PaeI	GCATGC	1 cut(s)	1798
PagI	TCATGA	1 cut(s)	1602
PctI	GAATGC	3 cut(s)	527, 1435, 2342
PfeI	GAWTC	4 cut(s)	1606, 1943, 1995, 2073
Ple19I	CGATCG	1 cut(s)	2092
PleI	GAGTC	3 cut(s)	16, 202, 303
PpsI	GAGTC	3 cut(s)	16, 202, 303
PpuMI	RGGWCCY	1 cut(s)	810
PshBI	ATTAAT	1 cut(s)	1350
Psp124BI	GAGCTC	3 cut(s)	420, 468, 611
Psp1406I	AACGTT	1 cut(s)	2105
Psp5II	RGGWCCY	1 cut(s)	810
Psp6I	CCWGG	2 cut(s)	225, 1677
PspGI	CCWGG	2 cut(s)	225, 1677
PspN4I	GGNNCC	3 cut(s)	811, 812, 1383
PspPI	GGNCC	8 cut(s)	44, 147, 810, 1206, 1381, 1573, 1653, 2354
PspPPI	RGGWCCY	1 cut(s)	810
PstI	CTGCAG	1 cut(s)	864
PstNI	CAGNNNCTG	1 cut(s)	28
PsuI	RGATCY	2 cut(s)	691, 1757
PvuI	CGATCG	1 cut(s)	2092
PvuII	CAGCTG	1 cut(s)	1055
RsaI	GTAC	1 cut(s)	1563
RsaNI	GTAC	1 cut(s)	1562
RseI	CAYNNNNRTG	3 cut(s)	1007, 1201, 1736
SacI	GAGCTC	3 cut(s)	420, 468, 611
SalI	GTCGAC	1 cut(s)	10
SaqAI	TTAA	8 cut(s)	86, 596, 633, 1007, 1350, 1893, 2108, 2330
Sau96I	GGNCC	8 cut(s)	44, 147, 810, 1206, 1381, 1573, 1653, 2354
SchI	GAGTC	3 cut(s)	17, 203, 303
ScrFI	CCNGG	5 cut(s)	227, 808, 851, 1646, 1679
SduI	GDGCHC	7 cut(s)	54, 162, 263, 420, 468, 611, 955
SfaNI	GCATC	7 cut(s)	28, 490, 1222, 1621, 1708, 2288, 2314
SfcI	CTRYAG	3 cut(s)	860, 1799, 2196
SfuI	TTCGAA	1 cut(s)	389
SinI	GGWCC	5 cut(s)	44, 810, 1573, 1653, 2354
SmiMI	CAYNNNNRTG	3 cut(s)	1007, 1201, 1736
SmlI	CTYRAG	1 cut(s)	604
SmoI	CTYRAG	1 cut(s)	604
SpeI	ACTAGT	1 cut(s)	2003
SphI	GCATGC	1 cut(s)	1798
SspI	AATATT	1 cut(s)	2319
SspMI	CTAG	4 cut(s)	1512, 1772, 1829, 2004
SstI	GAGCTC	3 cut(s)	420, 468, 611
StyD4I	CCNGG	5 cut(s)	225, 806, 849, 1644, 1677
StyI	CCWWGG	5 cut(s)	956, 1077, 1137, 2081, 2215
TaaI	ACNGT	6 cut(s)	73, 589, 736, 1100, 1457, 1909
TaiI	ACGT	3 cut(s)	714, 824, 2108
TaqI	TCGA	7 cut(s)	11, 383, 389, 540, 2088, 2362, 2392
TaqII	GACCGA	1 cut(s)	32
TatI	WGTACW	1 cut(s)	1561
TauI	GCSGC	6 cut(s)	35, 59, 450, 508, 644, 834
TfiI	GAWTC	4 cut(s)	1606, 1943, 1995, 2073
Tru1I	TTAA	8 cut(s)	86, 596, 633, 1007, 1350, 1893, 2108, 2330
Tru9I	TTAA	8 cut(s)	86, 596, 633, 1007, 1350, 1893, 2108, 2330
TscAI	CASTG	4 cut(s)	741, 1431, 1491, 2314
TseFI	GTSAC	1 cut(s)	2376
TseI	GCWGC	4 cut(s)	859, 1193, 1220, 1475
Tsp45I	GTSAC	1 cut(s)	2376
TspGWI	ACGGA	1 cut(s)	1651
TspRI	CASTG	4 cut(s)	741, 1431, 1491, 2314
VneI	GTGCAC	1 cut(s)	951
VpaK11BI	GGWCC	5 cut(s)	44, 810, 1573, 1653, 2354
VspI	ATTAAT	1 cut(s)	1350
XagI	CCTNNNNNAGG	1 cut(s)	616
XapI	RAATTY	2 cut(s)	1493, 1706
XceI	RCATGY	2 cut(s)	1475, 1798
XcmI	CCANNNNNNNNNTGG	1 cut(s)	883
XmiI	GTMKAC	3 cut(s)	11, 991, 1370
XspI	CTAG	4 cut(s)	1512, 1772, 1829, 2004
ZraI	GACGTC	1 cut(s)	712
Zsp2I	ATGCAT	1 cut(s)	2342

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.