Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0004551

Physical Location & Seq

Genomic Coordinates Forward (+)

33600172 .. 33605233

Gene Structure 5062 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00026650.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2730 bp

ATGGTGGAGTCGACTGAGCATCAGCAACTGGCGGCCATTCTCGGTCCTGAGCCCGCCGCCACTTTCCAAACCTTAATCTCCCACTTAATCTCCTCCCCCTCCTCTTTGCAAACCCTAATCTCCGACCTCATCTCCTCCGAGAAGCGGTCCGAGGCCGAGCACGTCTTCAACATCTGCAAGAAGGCCGATCCCGAGTCGCTTTCTCTCAAACTCGTTCAGCTTCTCCAGGTCTCTCCCGACGAGAAGACCCGAGCCATGTGCTCCATTCTCCTCCGGAAGCAACTACTCACCCGCGACCTGTGGCGAAGATTCTCTCGTAACACCAAATCCACCCTCAAACATACTCTATTATCTTGTATTCAACGCGAGGACACCCCAACATCGATTTCGAAGGCCATCTGCTACACCGTGTCGGAGCTCGCCTCCGCAGTGTTGTTCGTCGACGGCTGGCTGGAGCTCTTGCCCTTTCTGTTCCAATCCACCTCTTACGATGCGCCGCCGAAGCTTCAGGAATGTTCGTTCTTGATTTTCGATCAGCTCTCGTACTTCTTTACCCCGTTTAAGAAGGAATTGCGCACAGTCTTCTTGTACTGCTTGAGCTCCTCCACAAGGTCAGATGAAGTTAAGATAGCTGCGTTTAGTGCTGTGGTCAATTTCATTCGGTGTTTGCCCTACTCTGAAGATGAGGATAGGTTTCACGACGTCTTGATAGAAATGATGAGAACAGTGATGGGGGAATTGAACAAAGGGAAGGAGATCATGGCACAGGAGGCGATCAAGTTGTTCATTGAATTGGCCGGGACCCATCCGACGTTGCTCAGCCGCAACGGGCAGATCATCCGGGCTATGCTGCAGATTGCTGAAGCCATAGATGTCTTGGAACAAGGGACGAGGCACTTGGCCATTGAGTTTCTGATTACTCTGGCCGAGGCCGGAGAGCGTGCACCATGGATAATGAGGAATTCAGTGCAGTTTGTTGGTCTGTTGTTTTCCATTTTGATGAGGATGGTTTCGGATGTTGAGGATGATCCCTTGTGGCATAACGCTGAGACTGATGATGAGTATGCGGGTGTAAGTGCTGATTACCGTGTTGGGAATGAGTGTTTGCATAGGCTTGCCATTGCGTTGGGTGGCAATGACATTGTTCCTGTTGCGTTGAAGGAGTTACCTGCCTGTTTTGCTTCCAATGAGTGGAAGAAGCACAATGCTGCACTGGTTGCCCTTGCTCAAATTTCTGAGGGTTGCTCTGAGGTAATGATAAAAGATTTGGAGCAAGTGGTGGCAATGGTTTTGAACTCCTTTAAACATTCACATATTCGGGTAAGGTGGTCAGCTATTAATGCAGTTGGCCAGTTGTCTACTTATTTGGGCCCAGACCTGCAAGTTCAATATCATCAACAGGTGTTTCGTGCATTGAATGCCACTATATATGGTTTGCAGAACCGTCGTCTGCTGGCACATGCTGCTTCAGCACTGCAAAAATTTGTTGAGAAATGTGCTAGGGATATCTTGACACCTTATTTGGATGAAGTGGTTTCCCAATTGGTTGTACTTTTGCAGAGTGAGATACAGATGGTGCAAGTAGAAGCATTGACTGCTTTGGCATCAGTTGTTGTTTCATTTCCGGAGCAATTCCAAAAATACTATGAAGATGTCATGATTCCCCTGAGAGTTATGTTGTTGGATGCCACTTATAACCCGGTTTGGTCCAAGTCCGTGGAGTGTATTAGCCTGGTTGGTATGGCTGTTGGAAAGGAGAAATTCAGGGATGATGCTAAGAAAGTCATGGAAGTGCTGATGTCTCTGCAAGGATCTCAAATGGAGCCAGATGACCTAACTGCAAGTTGCATGCTACAGATATGCGCTGACCTCTGCAAGTGTCTAGGACAAGATTTCCTTCCGTACATGAGTGCTGTTATGCCTCCTTTGCTTCAGTTTGTTCAAATTAAGCCTGTTGAAACTGTTACCTCCGCAAATGACAATTGTGATATGGATGAATCTGATGATGAAAGTACGGAAACAATTACTCGTGGAGATAAAAGGATTAGAATCAAGACTAGTGCAGTGGAGGAAAAAGTTACAGCTTGCAATTTGCTGTGTTGCTATGCTGATGAATTGAAAGAAGGATTCCTTCCATGGATCAATCAGGTTGCCCCAACGTTAGTTCCACTTTTATATTATATCCATGAAAAAGTGAGGAAGTCTGCTGTTTCAGCAATGCTGAAGCTACTGCTTACTGCAAAGTTAGCTGTAGACAGAGGGCAAGCTGAAGGTTGTAATGAAAGGAATTTAGAGATATTGTTTGACTACATTGTTCGAGCTCTGATGGAAGCAGTACATAAGGAAGATGATTCTGAAATCTCCACAAATATATGGGATGCTATAAAAGAATGCATACAGATGCGGCTAAGGGCAGTGTGGATGGTGGTGCTGGTCTTGCGGGTGCCGAACCAGGCCTCCATCTTTAGCTTCTTGCCCATAGACTTCTGTGTTGAGCTCGAAGTCGAGATTGAGGTGCTGGAGGTTTTGGGTGAAGTTCCCATGCAGACCTTCAACCTCGATCACTTTTTCCTCCATAATGGTGACGCCATCTGGGATGTTAGTGGTCTCCGAGGACAGAATCTGCGCACCATCCGCACCGCCCTGAGCCGCGTCCGCATTTTTAATTTTTTTCATCAGGTTTGGACATCTGCTTCTGATCCTGCCTCTTTATGTATGTATTTTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000060 GO:0001101 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0031090 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032386 GO:0032388 GO:0032879 GO:0032880 GO:0033036 GO:0033157 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0042221 GO:0042277 GO:0042306 GO:0042307 GO:0042886 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046822 GO:0046824 GO:0046907 GO:0048518 GO:0050789 GO:0050896 GO:0051049 GO:0051050 GO:0051169 GO:0051170 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0060341 GO:0065007 GO:0070013 GO:0070201 GO:0070727 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071702 GO:0071705 GO:0072594 GO:0090087 GO:0090316 GO:1900180 GO:1900182 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1903827 GO:1903829 GO:1904589 GO:1904591 GO:1904951

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HEAT HEAT_2 HEAT_EZ

Protein Analysis

909

Amino Acids

102.56

Weight (kDa)

5.16

Isoelectric Point (pI)

45.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_IPO5	PF25780	128 - 275	1.4e-14	IPO5-like, TPR repeats
Importin_rep_4	PF18808	293 - 383	1.7e-14	Importin repeat
TOR1L1_N	PF24714	369 - 540	7e-06	TORTIFOLIA1 N-terminal
TPR_IMB1	PF25574	488 - 651	2.3e-08	Importin subunit beta-1-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004551)

Species	Orthologous Gene IDs
malus_domestica	MD11G1005500.v1.1
rosa_chinensis	RchiOBHm_Chr5g0054081 RchiOBHm_Chr5g0054171 RchiOBHm_Chr5g0054201 RchiOBHm_Chr5g0054251
rosa_laevigata	RLG00000034915 RLG00000034916 RLG00000034918 RLG00000034920 RLG00000034921
rosa_multiflora	Rmu_sc0000094.1_g000006 Rmu_sc0000509.1_g000025 Rmu_sc0006889.1_g000007 Rmu_sc0010082.1_g000001 Rmu_sc0023670.1_g000001
rosa_roxburghii	Rroxscaffold_1G00026650 Rroxscaffold_1G00026670
rosa_rugosa	Rorug05G0285300
rosa_samantha	Rh5AG354200 Rh5AG354300 Rh5AG354700 Rh5AG355200 Rh5BG366000 Rh5BG366100 Rh5BG367300 Rh5CG390800 Rh5DG055000 Rh5DG380900 Rh5DG381500
rosa_wichuraiana	Rw5G033390 Rw5G033410 Rw5G033590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1695
AatII	GACGTC	1 cut(s)	705
Acc16I	TGCGCA	2 cut(s)	575, 2627
Acc36I	ACCTGC	2 cut(s)	1177, 1386
AccB1I	GGYRCC	1 cut(s)	2443
AccB7I	CCANNNNNTGG	1 cut(s)	1191
AccI	GTMKAC	4 cut(s)	11, 441, 1358, 2253
AccII	CGCG	3 cut(s)	294, 366, 2652
AccIII	TCCGGA	2 cut(s)	273, 1624
AclI	AACGTT	1 cut(s)	2159
AclWI	GGATC	5 cut(s)	182, 1022, 1819, 2147, 2693
AcoI	YGGCCR	5 cut(s)	33, 795, 900, 924, 1348
AcsI	RAATTY	5 cut(s)	961, 1230, 1481, 1760, 2287
AcuI	CTGAAG	7 cut(s)	491, 699, 882, 1452, 1916, 2243, 2289
AcyI	GRCGYC	2 cut(s)	702, 2586
AfaI	GTAC	6 cut(s)	545, 590, 1551, 1904, 2014, 2337
AfiI	CCNNNNNNNGG	3 cut(s)	144, 609, 1191
AhlI	ACTAGT	1 cut(s)	2057
AjiI	CACGTC	1 cut(s)	163
AjnI	CCWGG	3 cut(s)	225, 1731, 2451
AjuI	GAANNNNNNNTTGG	2 cut(s)	370, 402
AloI	GAACNNNNNNTCC	4 cut(s)	503, 535, 2441, 2473
Alw21I	GWGCWC	8 cut(s)	162, 263, 420, 459, 602, 946, 2323, 2499
Alw26I	GTCTC	4 cut(s)	235, 1043, 1806, 2612
Alw44I	GTGCAC	1 cut(s)	942
AlwI	GGATC	5 cut(s)	182, 1022, 1819, 2147, 2693
AlwNI	CAGNNNCTG	2 cut(s)	28, 2623
Ama87I	CYCGRG	2 cut(s)	191, 249
Aor13HI	TCCGGA	2 cut(s)	273, 1624
ApaI	GGGCCC	1 cut(s)	1373
ApaLI	GTGCAC	1 cut(s)	942
ApeKI	GCWGC	4 cut(s)	632, 850, 1208, 1463
ApoI	RAATTY	5 cut(s)	961, 1230, 1481, 1760, 2287
ArsI	GACNNNNNNTTYG	2 cut(s)	1504, 1536
AseI	ATTAAT	1 cut(s)	1338
AspLEI	GCGC	4 cut(s)	496, 576, 1865, 2628
AspS9I	GGNCC	6 cut(s)	44, 147, 801, 1369, 1370, 1707
AsuC2I	CCSGG	3 cut(s)	799, 842, 1700
AsuHPI	GGTGA	3 cut(s)	280, 2543, 2594
AsuII	TTCGAA	1 cut(s)	389
AvaI	CYCGRG	2 cut(s)	191, 249
AvaII	GGWCC	4 cut(s)	44, 147, 801, 1707
BaeGI	GKGCMC	2 cut(s)	946, 1373
BalI	TGGCCA	2 cut(s)	902, 1350
BanI	GGYRCC	1 cut(s)	2443
BanII	GRGCYC	7 cut(s)	54, 420, 459, 602, 1373, 2323, 2499
BauI	CACGAG	1 cut(s)	2028
BbsI	GAAGAC	3 cut(s)	157, 251, 574
Bbv12I	GWGCWC	8 cut(s)	162, 263, 420, 459, 602, 946, 2323, 2499
BbvI	GCAGC	4 cut(s)	619, 837, 1195, 1450
BceAI	ACGGC	1 cut(s)	460
BcgI	CGANNNNNNTGC	4 cut(s)	240, 274, 1427, 1461
BciT130I	CCWGG	3 cut(s)	227, 1733, 2453
BcnI	CCSGG	3 cut(s)	799, 842, 1700
BcoDI	GTCTC	4 cut(s)	235, 1043, 1806, 2612
BcuI	ACTAGT	1 cut(s)	2057
BfaI	CTAG	3 cut(s)	1500, 1883, 2058
BfmI	CTRYAG	3 cut(s)	851, 1853, 2250
BfuAI	ACCTGC	2 cut(s)	1177, 1386
BlpI	GCTNAGC	1 cut(s)	818
Bme1390I	CCNGG	6 cut(s)	227, 799, 842, 1700, 1733, 2453
Bme18I	GGWCC	4 cut(s)	44, 147, 801, 1707
BmeT110I	CYCGRG	2 cut(s)	191, 249
BmgBI	CACGTC	1 cut(s)	163
BmgT120I	GGNCC	6 cut(s)	44, 147, 801, 1369, 1370, 1707
BmiI	GGNNCC	5 cut(s)	802, 803, 1371, 1824, 2445
BmrFI	CCNGG	6 cut(s)	227, 799, 842, 1700, 1733, 2453
BmsI	GCATC	7 cut(s)	28, 481, 1613, 1675, 1762, 2368, 2391
BpiI	GAAGAC	3 cut(s)	157, 251, 574
BplI	GAGNNNNNCTC	4 cut(s)	407, 439, 1229, 1261
BpmI	CTGGAG	3 cut(s)	209, 473, 2540
Bpu10I	CCTNAGC	3 cut(s)	48, 2408, 2645
Bpu1102I	GCTNAGC	1 cut(s)	818
Bpu14I	TTCGAA	1 cut(s)	389
BpuEI	CTTGAG	1 cut(s)	616
BpuMI	CCSGG	3 cut(s)	799, 842, 1700
Bsa29I	ATCGAT	1 cut(s)	383
BsaBI	GATNNNNATC	1 cut(s)	2048
BsaHI	GRCGYC	2 cut(s)	702, 2586
BsaI	GGTCTC	2 cut(s)	235, 2612
BsaJI	CCNNGG	6 cut(s)	150, 927, 947, 1716, 2135, 2611
BsaWI	WCCGGW	2 cut(s)	273, 1624
BsaXI	ACNNNNNCTCC	6 cut(s)	74, 104, 116, 146, 2441, 2471
Bsc4I	CCNNNNNNNGG	3 cut(s)	144, 609, 1191
Bse1I	ACTGG	3 cut(s)	33, 1218, 1351
Bse3DI	GCAATG	4 cut(s)	1119, 1141, 1290, 2223
Bse8I	GATNNNNATC	1 cut(s)	2048
BseAI	TCCGGA	2 cut(s)	273, 1624
BseBI	CCWGG	3 cut(s)	227, 1733, 2453
BseCI	ATCGAT	1 cut(s)	383
BseDI	CCNNGG	6 cut(s)	150, 927, 947, 1716, 2135, 2611
BseJI	GATNNNNATC	1 cut(s)	2048
BseLI	CCNNNNNNNGG	3 cut(s)	144, 609, 1191
BseMI	GCAATG	4 cut(s)	1119, 1141, 1290, 2223
BseMII	CTCAG	8 cut(s)	6, 39, 832, 1038, 1227, 1239, 1658, 2636
BseNI	ACTGG	3 cut(s)	33, 1218, 1351
BseRI	GAGGAG	5 cut(s)	82, 91, 124, 260, 592
BseSI	GKGCMC	2 cut(s)	946, 1373
BseXI	GCAGC	4 cut(s)	619, 837, 1195, 1450
BsgI	GTGCAG	3 cut(s)	989, 1194, 2082
Bsh1236I	CGCG	3 cut(s)	294, 366, 2652
BshNI	GGYRCC	1 cut(s)	2443
BshVI	ATCGAT	1 cut(s)	383
BsiHKAI	GWGCWC	8 cut(s)	162, 263, 420, 459, 602, 946, 2323, 2499
BsiHKCI	CYCGRG	2 cut(s)	191, 249
BsiSI	CCGG	6 cut(s)	274, 798, 841, 933, 1625, 1700
BslFI	GGGAC	2 cut(s)	814, 901
BslI	CCNNNNNNNGG	3 cut(s)	144, 609, 1191
BsmAI	GTCTC	4 cut(s)	235, 1043, 1806, 2612
BsmFI	GGGAC	2 cut(s)	814, 901
BsmI	GAATGC	2 cut(s)	1423, 2396
Bso31I	GGTCTC	2 cut(s)	235, 2612
BsoBI	CYCGRG	2 cut(s)	191, 249
Bsp119I	TTCGAA	1 cut(s)	389
Bsp120I	GGGCCC	1 cut(s)	1369
Bsp13I	TCCGGA	2 cut(s)	273, 1624
Bsp1720I	GCTNAGC	1 cut(s)	818
Bsp19I	CCATGG	2 cut(s)	947, 2135
BspCNI	CTCAG	8 cut(s)	7, 40, 831, 1039, 1228, 1240, 1659, 2637
BspDI	ATCGAT	1 cut(s)	383
BspEI	TCCGGA	2 cut(s)	273, 1624
BspFNI	CGCG	3 cut(s)	294, 366, 2652
BspHI	TCATGA	1 cut(s)	1656
BspLI	GGNNCC	5 cut(s)	802, 803, 1371, 1824, 2445
BspMAI	CTGCAG	1 cut(s)	855
BspMI	ACCTGC	2 cut(s)	1177, 1386
BspPI	GGATC	5 cut(s)	182, 1022, 1819, 2147, 2693
BspT104I	TTCGAA	1 cut(s)	389
BspT107I	GGYRCC	1 cut(s)	2443
BspTNI	GGTCTC	2 cut(s)	235, 2612
BsrDI	GCAATG	4 cut(s)	1119, 1141, 1290, 2223
BsrI	ACTGG	3 cut(s)	33, 1218, 1351
BssECI	CCNNGG	6 cut(s)	150, 927, 947, 1716, 2135, 2611
BssNI	GRCGYC	2 cut(s)	702, 2586
BssSI	CACGAG	1 cut(s)	2028
BssT1I	CCWWGG	2 cut(s)	947, 2135
Bst2BI	CACGAG	1 cut(s)	2028
Bst2UI	CCWGG	3 cut(s)	227, 1733, 2453
Bst4CI	ACNGT	6 cut(s)	409, 580, 727, 1088, 1445, 1963
BstACI	GRCGYC	2 cut(s)	702, 2586
BstAPI	GCANNNNNTGC	4 cut(s)	1217, 1418, 1463, 1595
BstBI	TTCGAA	1 cut(s)	389
BstC8I	GCNNGC	9 cut(s)	54, 420, 449, 942, 1116, 1455, 1850, 2086, 2265
BstDSI	CCRYGG	3 cut(s)	947, 1716, 2135
BstENI	CCTNNNNNAGG	1 cut(s)	607
BstFNI	CGCG	3 cut(s)	294, 366, 2652
BstHHI	GCGC	4 cut(s)	496, 576, 1865, 2628
BstMAI	GTCTC	4 cut(s)	235, 1043, 1806, 2612
BstNI	CCWGG	3 cut(s)	227, 1733, 2453
BstNSI	RCATGY	2 cut(s)	1463, 1852
BstSCI	CCNGG	6 cut(s)	225, 797, 840, 1698, 1731, 2451
BstSFI	CTRYAG	3 cut(s)	851, 1853, 2250
BstSLI	GKGCMC	2 cut(s)	946, 1373
BstUI	CGCG	3 cut(s)	294, 366, 2652
BstV1I	GCAGC	4 cut(s)	619, 837, 1195, 1450
BstV2I	GAAGAC	3 cut(s)	157, 251, 574
BstX2I	RGATCY	1 cut(s)	1811
BstXI	CCANNNNNNTGG	2 cut(s)	1126, 1717
BstYI	RGATCY	1 cut(s)	1811
Bsu15I	ATCGAT	1 cut(s)	383
BsuTUI	ATCGAT	1 cut(s)	383
BtgI	CCRYGG	3 cut(s)	947, 1716, 2135
BtrI	CACGTC	1 cut(s)	163
BtsI	GCAGTG	4 cut(s)	435, 1472, 2070, 2421
BtsIMutI	CAGTG	7 cut(s)	435, 732, 972, 1211, 1472, 2070, 2421
BveI	ACCTGC	2 cut(s)	1177, 1386
Cac8I	GCNNGC	9 cut(s)	54, 420, 449, 942, 1116, 1455, 1850, 2086, 2265
CaiI	CAGNNNCTG	2 cut(s)	28, 2623
CciI	TCATGA	1 cut(s)	1656
CfoI	GCGC	4 cut(s)	496, 576, 1865, 2628
Cfr13I	GGNCC	6 cut(s)	44, 147, 801, 1369, 1370, 1707
ClaI	ATCGAT	1 cut(s)	383
CpoI	CGGWCCG	1 cut(s)	147
CseI	GACGC	2 cut(s)	2594, 2641
Csp6I	GTAC	6 cut(s)	544, 589, 1550, 1903, 2013, 2336
CspI	CGGWCCG	1 cut(s)	147
CviQI	GTAC	6 cut(s)	544, 589, 1550, 1903, 2013, 2336
DraI	TTTAAA	1 cut(s)	1303
EaeI	YGGCCR	5 cut(s)	33, 795, 900, 924, 1348
Ecl136II	GAGCTC	5 cut(s)	418, 457, 600, 2321, 2497
Eco130I	CCWWGG	2 cut(s)	947, 2135
Eco147I	AGGCCT	1 cut(s)	2456
Eco24I	GRGCYC	7 cut(s)	54, 420, 459, 602, 1373, 2323, 2499
Eco31I	GGTCTC	2 cut(s)	235, 2612
Eco32I	GATATC	1 cut(s)	1507
Eco47I	GGWCC	4 cut(s)	44, 147, 801, 1707
Eco53kI	GAGCTC	5 cut(s)	418, 457, 600, 2321, 2497
Eco57I	CTGAAG	7 cut(s)	491, 699, 882, 1452, 1916, 2243, 2289
Eco88I	CYCGRG	2 cut(s)	191, 249
EcoICRI	GAGCTC	5 cut(s)	418, 457, 600, 2321, 2497
EcoNI	CCTNNNNNAGG	1 cut(s)	607
EcoO109I	RGGNCCY	1 cut(s)	801
EcoRI	GAATTC	1 cut(s)	961
EcoRII	CCWGG	3 cut(s)	225, 1731, 2451
EcoRV	GATATC	1 cut(s)	1507
EcoT14I	CCWWGG	2 cut(s)	947, 2135
EcoT22I	ATGCAT	1 cut(s)	2396
EcoT38I	GRGCYC	7 cut(s)	54, 420, 459, 602, 1373, 2323, 2499
ErhI	CCWWGG	2 cut(s)	947, 2135
FalI	AAGNNNNNCTT	4 cut(s)	1881, 1913, 2115, 2147
FaqI	GGGAC	2 cut(s)	814, 901
FauI	CCCGC	4 cut(s)	61, 299, 1060, 2433
FblI	GTMKAC	4 cut(s)	11, 441, 1358, 2253
FriOI	GRGCYC	7 cut(s)	54, 420, 459, 602, 1373, 2323, 2499
FspBI	CTAG	3 cut(s)	1500, 1883, 2058
FspI	TGCGCA	2 cut(s)	575, 2627
GlaI	GCGC	4 cut(s)	495, 575, 1864, 2627
GsuI	CTGGAG	3 cut(s)	209, 473, 2540
HapII	CCGG	6 cut(s)	274, 798, 841, 933, 1625, 1700
HgaI	GACGC	2 cut(s)	2594, 2641
HhaI	GCGC	4 cut(s)	496, 576, 1865, 2628
Hin1I	GRCGYC	2 cut(s)	702, 2586
Hin6I	GCGC	4 cut(s)	494, 574, 1863, 2626
HinP1I	GCGC	4 cut(s)	494, 574, 1863, 2626
HincII	GTYRAC	2 cut(s)	12, 442
HindII	GTYRAC	2 cut(s)	12, 442
HindIII	AAGCTT	1 cut(s)	503
HinfI	GANTC	9 cut(s)	8, 194, 309, 1660, 1997, 2049, 2127, 2351, 2620
HpaII	CCGG	6 cut(s)	274, 798, 841, 933, 1625, 1700
HphI	GGTGA	3 cut(s)	280, 2543, 2594
Hpy166II	GTNNAC	5 cut(s)	12, 442, 944, 1359, 2254
Hpy8I	GTNNAC	5 cut(s)	12, 442, 944, 1359, 2254
Hpy99I	CGWCG	6 cut(s)	242, 443, 446, 704, 814, 1449
HpyCH4III	ACNGT	6 cut(s)	409, 580, 727, 1088, 1445, 1963
HpyCH4IV	ACGT	4 cut(s)	162, 702, 812, 2159
HpySE526I	ACGT	4 cut(s)	162, 702, 812, 2159
Hsp92I	GRCGYC	2 cut(s)	702, 2586
HspAI	GCGC	4 cut(s)	494, 574, 1863, 2626
KflI	GGGWCCC	1 cut(s)	801
Kpn2I	TCCGGA	2 cut(s)	273, 1624
LmnI	GCTCC	7 cut(s)	266, 415, 454, 605, 1270, 1627, 1822
Lsp1109I	GCAGC	4 cut(s)	619, 837, 1195, 1450
LweI	GCATC	7 cut(s)	28, 481, 1613, 1675, 1762, 2368, 2391
MaeI	CTAG	3 cut(s)	1500, 1883, 2058
MaeII	ACGT	4 cut(s)	162, 702, 812, 2159
MaeIII	GTNAC	5 cut(s)	317, 1164, 1963, 2077, 2582
MboII	GAAGA	8 cut(s)	157, 256, 318, 574, 692, 1207, 1661, 2357
MfeI	CAATTG	2 cut(s)	1541, 1981
MflI	RGATCY	1 cut(s)	1811
MlsI	TGGCCA	2 cut(s)	902, 1350
MluNI	TGGCCA	2 cut(s)	902, 1350
MlyI	GAGTC	2 cut(s)	17, 203
MmeI	TCCRAC	5 cut(s)	147, 393, 833, 1662, 1729
Mox20I	TGGCCA	2 cut(s)	902, 1350
Mph1103I	ATGCAT	1 cut(s)	2396
MroI	TCCGGA	2 cut(s)	273, 1624
MscI	TGGCCA	2 cut(s)	902, 1350
MseI	TTAA	8 cut(s)	74, 86, 561, 624, 1302, 1338, 1947, 2664
MslI	CAYNNNNRTG	4 cut(s)	998, 1790, 2399, 2580
Msp20I	TGGCCA	2 cut(s)	902, 1350
MspI	CCGG	6 cut(s)	274, 798, 841, 933, 1625, 1700
MspR9I	CCNGG	6 cut(s)	227, 799, 842, 1700, 1733, 2453
MunI	CAATTG	2 cut(s)	1541, 1981
Mva1269I	GAATGC	2 cut(s)	1423, 2396
MvaI	CCWGG	3 cut(s)	227, 1733, 2453
MvnI	CGCG	3 cut(s)	294, 366, 2652
NciI	CCSGG	3 cut(s)	799, 842, 1700
NcoI	CCATGG	2 cut(s)	947, 2135
NlaIV	GGNNCC	5 cut(s)	802, 803, 1371, 1824, 2445
NmeAIII	GCCGAG	2 cut(s)	181, 952
NmuCI	GTSAC	1 cut(s)	2582
NsbI	TGCGCA	2 cut(s)	575, 2627
NsiI	ATGCAT	1 cut(s)	2396
NspI	RCATGY	2 cut(s)	1463, 1852
NspV	TTCGAA	1 cut(s)	389
PaeI	GCATGC	1 cut(s)	1852
PagI	TCATGA	1 cut(s)	1656
PceI	AGGCCT	1 cut(s)	2456
PctI	GAATGC	2 cut(s)	1423, 2396
PfeI	GAWTC	7 cut(s)	309, 1660, 1997, 2049, 2127, 2351, 2620
PflMI	CCANNNNNTGG	1 cut(s)	1191
PleI	GAGTC	2 cut(s)	16, 202
PpsI	GAGTC	2 cut(s)	16, 202
PpuMI	RGGWCCY	1 cut(s)	801
PshBI	ATTAAT	1 cut(s)	1338
PsiI	TTATAA	1 cut(s)	1695
Psp124BI	GAGCTC	5 cut(s)	420, 459, 602, 2323, 2499
Psp1406I	AACGTT	1 cut(s)	2159
Psp5II	RGGWCCY	1 cut(s)	801
Psp6I	CCWGG	3 cut(s)	225, 1731, 2451
PspGI	CCWGG	3 cut(s)	225, 1731, 2451
PspN4I	GGNNCC	5 cut(s)	802, 803, 1371, 1824, 2445
PspOMI	GGGCCC	1 cut(s)	1369
PspPI	GGNCC	6 cut(s)	44, 147, 801, 1369, 1370, 1707
PspPPI	RGGWCCY	1 cut(s)	801
PstI	CTGCAG	1 cut(s)	855
PstNI	CAGNNNCTG	2 cut(s)	28, 2623
PsuI	RGATCY	1 cut(s)	1811
RsaI	GTAC	6 cut(s)	545, 590, 1551, 1904, 2014, 2337
RsaNI	GTAC	6 cut(s)	544, 589, 1550, 1903, 2013, 2336
RseI	CAYNNNNRTG	4 cut(s)	998, 1790, 2399, 2580
Rsr2I	CGGWCCG	1 cut(s)	147
RsrII	CGGWCCG	1 cut(s)	147
SacI	GAGCTC	5 cut(s)	420, 459, 602, 2323, 2499
SalI	GTCGAC	2 cut(s)	10, 440
SaqAI	TTAA	8 cut(s)	74, 86, 561, 624, 1302, 1338, 1947, 2664
Sau96I	GGNCC	6 cut(s)	44, 147, 801, 1369, 1370, 1707
SchI	GAGTC	2 cut(s)	17, 203
ScrFI	CCNGG	6 cut(s)	227, 799, 842, 1700, 1733, 2453
SfaNI	GCATC	7 cut(s)	28, 481, 1613, 1675, 1762, 2368, 2391
SfcI	CTRYAG	3 cut(s)	851, 1853, 2250
SfuI	TTCGAA	1 cut(s)	389
SgrDI	CGTCGACG	1 cut(s)	440
SinI	GGWCC	4 cut(s)	44, 147, 801, 1707
SmiMI	CAYNNNNRTG	4 cut(s)	998, 1790, 2399, 2580
SmlI	CTYRAG	1 cut(s)	595
SmoI	CTYRAG	1 cut(s)	595
SpeI	ACTAGT	1 cut(s)	2057
SphI	GCATGC	1 cut(s)	1852
SseBI	AGGCCT	1 cut(s)	2456
SspMI	CTAG	3 cut(s)	1500, 1883, 2058
SstI	GAGCTC	5 cut(s)	420, 459, 602, 2323, 2499
StuI	AGGCCT	1 cut(s)	2456
StyD4I	CCNGG	6 cut(s)	225, 797, 840, 1698, 1731, 2451
StyI	CCWWGG	2 cut(s)	947, 2135
TaaI	ACNGT	6 cut(s)	409, 580, 727, 1088, 1445, 1963
TaiI	ACGT	4 cut(s)	165, 705, 815, 2162
TaqI	TCGA	9 cut(s)	11, 383, 389, 441, 531, 2317, 2499, 2505, 2559
TaqII	GACCGA	1 cut(s)	32
TatI	WGTACW	3 cut(s)	588, 1549, 2335
TauI	GCSGC	6 cut(s)	35, 59, 499, 825, 2407, 2652
TfiI	GAWTC	7 cut(s)	309, 1660, 1997, 2049, 2127, 2351, 2620
Tru1I	TTAA	8 cut(s)	74, 86, 561, 624, 1302, 1338, 1947, 2664
Tru9I	TTAA	8 cut(s)	74, 86, 561, 624, 1302, 1338, 1947, 2664
TscAI	CASTG	7 cut(s)	435, 732, 972, 1218, 1479, 2070, 2421
TseFI	GTSAC	1 cut(s)	2582
TseI	GCWGC	4 cut(s)	632, 850, 1208, 1463
Tsp45I	GTSAC	1 cut(s)	2582
TspGWI	ACGGA	3 cut(s)	1705, 1890, 2030
TspRI	CASTG	7 cut(s)	435, 732, 972, 1218, 1479, 2070, 2421
Van91I	CCANNNNNTGG	1 cut(s)	1191
VneI	GTGCAC	1 cut(s)	942
VpaK11BI	GGWCC	4 cut(s)	44, 147, 801, 1707
VspI	ATTAAT	1 cut(s)	1338
XagI	CCTNNNNNAGG	1 cut(s)	607
XapI	RAATTY	5 cut(s)	961, 1230, 1481, 1760, 2287
XceI	RCATGY	2 cut(s)	1463, 1852
XcmI	CCANNNNNNNNNTGG	1 cut(s)	874
XmiI	GTMKAC	4 cut(s)	11, 441, 1358, 2253
XspI	CTAG	3 cut(s)	1500, 1883, 2058
ZraI	GACGTC	1 cut(s)	703
Zsp2I	ATGCAT	1 cut(s)	2396

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.