Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0023670.1

Orthogroup ID

OG0004551

Physical Location & Seq

Genomic Coordinates Reverse (-)

4155 .. 7831

Gene Structure 3677 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0023670.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2205 bp

atggccgagtcgactcagctccagcttcaacttgagcaagtcgcgacgattcttggccccgacccgctcgcctctttcaaaaccctaatctcctacctcctctgcccctcctattttgaaagcctaatctcctcctccctcttctcctccaattccgagcagcgatcccgggccgagctcgtctataacctctgcaaaaagtacgatcccgactcgctctccctcacactcgctcacctcctccaattctcgccggcgccggactcccgatttatctccgccgtcctcctccgcaatcaaatccgcctctggccaagcctctcggagaacacacaatccacgatcaaatccgctctattgttctccattcaacgacaggacaacacgaaatcgatttcaggcagcctctgcgacgccgtttccgcgctcgccgccgggatcttgccggaaaacggctggccagagctcttgccctttctgttcgcatccgtttccgcggattcgctgccgccgatacttcaggaatcggcagcgttcttgatattcgcgcagctctcgccgcacttattgccgtatataaacgaattgcgcacagtcttcttgtcctgcttgagctcctcgtccaggtcaaacgacgttaaagtagctgcgtttaatgcggtggtcaatttcattcggtgtttgcccagctctgaagatccggatatgtttcacgacgtcttgatagaaatgatgagaaccgtgatgggggaattgaacaaaaagaacgaggccacggcgcaggaggcgatcaagttgttcattgaattggccgggacccatccgacgttgctcagccgcagggggcagatcgtccgggctatgctgcagattgctgaagccatacaagtgttggaacaaggcacgaggcacttggccatagagtttgtgatcactttggccgaggcaggagagcaggcgccatggataatgaggaattcagtgcagtttgttggtctgttgttttccattttgatgaggatggtttcggatgttgaggatgatcccttgtggcataaggctgggactgatgatgagtatgcaggtgtaagtgctgattaccgtgttgggaatgagtgtttgcataggcttgccattgcgttgggcggcaatgacattgttcctgttgcgttgaaggagttacctgcctgttttgcttccaatgagtggaagaagcacaatgctgcactggttgcccttgctcaaatttctgagggttgttcaaaggtaatgataaaagatttggagcaagtggtggcaatggttttgaactcctttgaacattcacatattcgggtaaggtggtcagcgattaatgcagttggccagttgtctacttatttggccccagacctgcaagttcaatatcatcaacaggtgttttctgcactgaatgccactatatatggtttgcagaatcgtcgtcttctggcacatgctgcttcagcactgcaaaaattcattgagaaatgtgctagggatatcttgacaccttatttggatgaagtgttttcccaattggttgtacttttgcagagtgagatacaaatggtgcaagtagaagcattgacagctttggcatcagttgttgtttcatttccggagcaattccaaaaatactatgaagttgtcatgattcccctgagagctatgttgttggatgccgctaataacccagttttgtccaagtccgtggcgtgtattagcttggttggtatggctgttggaaaggagaaattcagggatgatgctaagaaagtcatggaagtgctgctgtcttttcaaggatctcaaatggagccagatgatccaactgcgagttgcatgctacagatatgcgctgacctgtgcaagtgtctaggacaagatttccttccttacatgggtgctgttatgcctcctttgcttcagtttgttcaaattaagcctgttgaaaccgttacctccgcaaatgacaaaagcgatatggttgaatctgatgatgaaaggtttcaatttctgcaagttctgtatctgaaagccttctgtaatatatgcttccatgtgcctgcacaacctgtttatttatttaaaccttccatcctctttgcaagcaaccacacacaactacacaagttaacgagtccaagttcacatgaacctttagctgcatgccataaaaactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000060 GO:0001101 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0031090 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032386 GO:0032388 GO:0032879 GO:0032880 GO:0033036 GO:0033157 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0042221 GO:0042277 GO:0042306 GO:0042307 GO:0042886 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046822 GO:0046824 GO:0046907 GO:0048518 GO:0050789 GO:0050896 GO:0051049 GO:0051050 GO:0051169 GO:0051170 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0060341 GO:0065007 GO:0070013 GO:0070201 GO:0070727 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071702 GO:0071705 GO:0072594 GO:0090087 GO:0090316 GO:1900180 GO:1900182 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1903827 GO:1903829 GO:1904589 GO:1904591 GO:1904951

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HEAT HEAT_2 HEAT_EZ

Protein Analysis

734

Amino Acids

81.27

Weight (kDa)

5.41

Isoelectric Point (pI)

49.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004551)

Species	Orthologous Gene IDs
malus_domestica	MD11G1005500.v1.1
rosa_chinensis	RchiOBHm_Chr5g0054081 RchiOBHm_Chr5g0054171 RchiOBHm_Chr5g0054201 RchiOBHm_Chr5g0054251
rosa_laevigata	RLG00000034915 RLG00000034916 RLG00000034918 RLG00000034920 RLG00000034921
rosa_multiflora	Rmu_sc0000094.1_g000006 Rmu_sc0000509.1_g000025 Rmu_sc0006889.1_g000007 Rmu_sc0010082.1_g000001 Rmu_sc0023670.1_g000001
rosa_roxburghii	Rroxscaffold_1G00026650 Rroxscaffold_1G00026670
rosa_rugosa	Rorug05G0285300
rosa_samantha	Rh5AG354200 Rh5AG354300 Rh5AG354700 Rh5AG355200 Rh5BG366000 Rh5BG366100 Rh5BG367300 Rh5CG390800 Rh5DG055000 Rh5DG380900 Rh5DG381500
rosa_wichuraiana	Rw5G033390 Rw5G033410 Rw5G033590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1073
AatII	GACGTC	1 cut(s)	720
Acc16I	TGCGCA	1 cut(s)	590
Acc36I	ACCTGC	3 cut(s)	1073, 1192, 1401
AccB1I	GGYRCC	2 cut(s)	256, 958
AccB7I	CCANNNNNTGG	1 cut(s)	1206
AccBSI	CCGCTC	2 cut(s)	67, 353
AccI	GTMKAC	2 cut(s)	11, 1373
AccII	CGCG	4 cut(s)	44, 425, 497, 548
AccIII	TCCGGA	2 cut(s)	700, 1639
AclWI	GGATC	7 cut(s)	159, 200, 446, 692, 1037, 1834, 1841
AcoI	YGGCCR	7 cut(s)	3, 311, 458, 810, 915, 939, 1363
AcsI	RAATTY	4 cut(s)	976, 1245, 1496, 1775
AcuI	CTGAAG	5 cut(s)	503, 714, 897, 1467, 1931
AcyI	GRCGYC	4 cut(s)	257, 414, 717, 959
AfaI	GTAC	2 cut(s)	203, 1566
AfiI	CCNNNNNNNGG	5 cut(s)	452, 624, 747, 1206, 1922
AjnI	CCWGG	1 cut(s)	623
AloI	GAACNNNNNNTCC	2 cut(s)	320, 352
Alw21I	GWGCWC	3 cut(s)	180, 468, 617
AlwI	GGATC	7 cut(s)	159, 200, 446, 692, 1037, 1834, 1841
AlwNI	CAGNNNCTG	1 cut(s)	408
Ama87I	CYCGRG	1 cut(s)	168
Aor13HI	TCCGGA	2 cut(s)	700, 1639
ApoI	RAATTY	4 cut(s)	976, 1245, 1496, 1775
ArsI	GACNNNNNNTTYG	2 cut(s)	1519, 1551
AseI	ATTAAT	1 cut(s)	1353
Asp700I	GAANNNNTTC	2 cut(s)	2028, 2060
AspLEI	GCGC	7 cut(s)	259, 427, 550, 591, 781, 961, 1880
AspS9I	GGNCC	4 cut(s)	56, 171, 816, 1384
AsuC2I	CCSGG	5 cut(s)	169, 170, 436, 814, 857
AsuHPI	GGTGA	1 cut(s)	227
AvaI	CYCGRG	1 cut(s)	168
AvaII	GGWCC	1 cut(s)	816
BalI	TGGCCA	4 cut(s)	313, 460, 917, 1365
BanI	GGYRCC	2 cut(s)	256, 958
BanII	GRGCYC	3 cut(s)	180, 468, 617
BauI	CACGAG	1 cut(s)	904
BbsI	GAAGAC	2 cut(s)	589, 1457
Bbv12I	GWGCWC	3 cut(s)	180, 468, 617
BccI	CCATC	4 cut(s)	739, 828, 1015, 2126
BceAI	ACGGC	5 cut(s)	266, 401, 469, 556, 792
BcgI	CGANNNNNNTGC	4 cut(s)	1442, 1476, 1846, 1880
BciT130I	CCWGG	1 cut(s)	625
BclI	TGATCA	1 cut(s)	930
BcnI	CCSGG	5 cut(s)	169, 170, 436, 814, 857
BfaI	CTAG	3 cut(s)	1515, 1898, 2203
BfmI	CTRYAG	2 cut(s)	866, 1868
BfoI	RGCGCY	2 cut(s)	260, 962
BfuAI	ACCTGC	3 cut(s)	1073, 1192, 1401
BlpI	GCTNAGC	1 cut(s)	833
Bme1390I	CCNGG	6 cut(s)	169, 170, 436, 625, 814, 857
Bme18I	GGWCC	1 cut(s)	816
BmeT110I	CYCGRG	1 cut(s)	168
BmgT120I	GGNCC	4 cut(s)	56, 171, 816, 1384
BmiI	GGNNCC	7 cut(s)	58, 258, 817, 818, 960, 1386, 1839
BmrFI	CCNGG	6 cut(s)	169, 170, 436, 625, 814, 857
BmrI	ACTGGG	1 cut(s)	1709
BmsI	GCATC	4 cut(s)	494, 1628, 1690, 1777
BmuI	ACTGGG	1 cut(s)	1709
BpiI	GAAGAC	2 cut(s)	589, 1457
BpmI	CTGGAG	1 cut(s)	5
Bpu1102I	GCTNAGC	1 cut(s)	833
BpuEI	CTTGAG	2 cut(s)	53, 631
BpuMI	CCSGG	5 cut(s)	169, 170, 436, 814, 857
Bsa29I	ATCGAT	1 cut(s)	392
BsaHI	GRCGYC	4 cut(s)	257, 414, 717, 959
BsaJI	CCNNGG	6 cut(s)	168, 495, 774, 942, 962, 1731
BsaWI	WCCGGW	2 cut(s)	700, 1639
BsaXI	ACNNNNNCTCC	2 cut(s)	203, 233
Bsc4I	CCNNNNNNNGG	5 cut(s)	452, 624, 747, 1206, 1922
Bse118I	RCCGGY	1 cut(s)	253
Bse1I	ACTGG	3 cut(s)	1233, 1366, 1715
Bse3DI	GCAATG	3 cut(s)	1134, 1156, 1305
BseAI	TCCGGA	2 cut(s)	700, 1639
BseBI	CCWGG	1 cut(s)	625
BseCI	ATCGAT	1 cut(s)	392
BseDI	CCNNGG	6 cut(s)	168, 495, 774, 942, 962, 1731
BseGI	GGATG	9 cut(s)	485, 820, 1026, 1036, 1045, 1546, 1705, 1789, 2118
BseLI	CCNNNNNNNGG	5 cut(s)	452, 624, 747, 1206, 1922
BseMI	GCAATG	3 cut(s)	1134, 1156, 1305
BseMII	CTCAG	4 cut(s)	29, 847, 1242, 1673
BseNI	ACTGG	3 cut(s)	1233, 1366, 1715
BseRI	GAGGAG	7 cut(s)	89, 121, 124, 136, 230, 278, 607
BseYI	CCCAGC	2 cut(s)	686, 1061
BsgI	GTGCAG	4 cut(s)	1004, 1209, 1410, 2073
Bsh1236I	CGCG	4 cut(s)	44, 425, 497, 548
BshNI	GGYRCC	2 cut(s)	256, 958
BshVI	ATCGAT	1 cut(s)	392
BsiHKAI	GWGCWC	3 cut(s)	180, 468, 617
BsiHKCI	CYCGRG	1 cut(s)	168
BsiSI	CCGG	9 cut(s)	169, 254, 260, 435, 446, 701, 813, 856, 1640
BslFI	GGGAC	2 cut(s)	829, 1078
BslI	CCNNNNNNNGG	5 cut(s)	452, 624, 747, 1206, 1922
BsmFI	GGGAC	2 cut(s)	829, 1078
BsmI	GAATGC	1 cut(s)	1438
BsoBI	CYCGRG	1 cut(s)	168
Bsp1286I	GDGCHC	3 cut(s)	180, 468, 617
Bsp13I	TCCGGA	2 cut(s)	700, 1639
Bsp1720I	GCTNAGC	1 cut(s)	833
Bsp19I	CCATGG	1 cut(s)	962
Bsp68I	TCGCGA	1 cut(s)	44
BspCNI	CTCAG	4 cut(s)	28, 846, 1243, 1674
BspDI	ATCGAT	1 cut(s)	392
BspEI	TCCGGA	2 cut(s)	700, 1639
BspFNI	CGCG	4 cut(s)	44, 425, 497, 548
BspHI	TCATGA	1 cut(s)	1671
BspLI	GGNNCC	7 cut(s)	58, 258, 817, 818, 960, 1386, 1839
BspMAI	CTGCAG	1 cut(s)	870
BspMI	ACCTGC	3 cut(s)	1073, 1192, 1401
BspPI	GGATC	7 cut(s)	159, 200, 446, 692, 1037, 1834, 1841
BspT107I	GGYRCC	2 cut(s)	256, 958
BsrBI	CCGCTC	2 cut(s)	67, 353
BsrDI	GCAATG	3 cut(s)	1134, 1156, 1305
BsrFI	RCCGGY	1 cut(s)	253
BsrI	ACTGG	3 cut(s)	1233, 1366, 1715
BssAI	RCCGGY	1 cut(s)	253
BssECI	CCNNGG	6 cut(s)	168, 495, 774, 942, 962, 1731
BssNI	GRCGYC	4 cut(s)	257, 414, 717, 959
BssSI	CACGAG	1 cut(s)	904
BssT1I	CCWWGG	1 cut(s)	962
Bst2BI	CACGAG	1 cut(s)	904
Bst2UI	CCWGG	1 cut(s)	625
Bst4CI	ACNGT	4 cut(s)	595, 742, 1103, 1978
Bst6I	CTCTTC	1 cut(s)	146
BstACI	GRCGYC	4 cut(s)	257, 414, 717, 959
BstAPI	GCANNNNNTGC	5 cut(s)	408, 568, 1232, 1433, 1478
BstDEI	CTNAG	5 cut(s)	15, 833, 1251, 1682, 1791
BstDSI	CCRYGG	4 cut(s)	495, 774, 962, 1731
BstENI	CCTNNNNNAGG	1 cut(s)	622
BstF5I	GGATG	9 cut(s)	485, 820, 1026, 1036, 1045, 1546, 1705, 1789, 2118
BstFNI	CGCG	4 cut(s)	44, 425, 497, 548
BstH2I	RGCGCY	2 cut(s)	260, 962
BstHHI	GCGC	7 cut(s)	259, 427, 550, 591, 781, 961, 1880
BstNI	CCWGG	1 cut(s)	625
BstNSI	RCATGY	3 cut(s)	1478, 1867, 2193
BstSCI	CCNGG	6 cut(s)	167, 168, 434, 623, 812, 855
BstSFI	CTRYAG	2 cut(s)	866, 1868
BstUI	CGCG	4 cut(s)	44, 425, 497, 548
BstV2I	GAAGAC	2 cut(s)	589, 1457
BstX2I	RGATCY	3 cut(s)	438, 697, 1826
BstXI	CCANNNNNNTGG	2 cut(s)	1141, 1732
BstYI	RGATCY	3 cut(s)	438, 697, 1826
Bsu15I	ATCGAT	1 cut(s)	392
BsuTUI	ATCGAT	1 cut(s)	392
BtgI	CCRYGG	4 cut(s)	495, 774, 962, 1731
BtsCI	GGATG	9 cut(s)	485, 820, 1026, 1036, 1045, 1546, 1705, 1789, 2118
BtsI	GCAGTG	1 cut(s)	1487
BtsIMutI	CAGTG	4 cut(s)	987, 1226, 1427, 1487
BtuMI	TCGCGA	1 cut(s)	44
BveI	ACCTGC	3 cut(s)	1073, 1192, 1401
CaiI	CAGNNNCTG	1 cut(s)	408
CciI	TCATGA	1 cut(s)	1671
CfoI	GCGC	7 cut(s)	259, 427, 550, 591, 781, 961, 1880
Cfr10I	RCCGGY	1 cut(s)	253
Cfr13I	GGNCC	4 cut(s)	56, 171, 816, 1384
Cfr42I	CCGCGG	1 cut(s)	498
Cfr9I	CCCGGG	1 cut(s)	168
ClaI	ATCGAT	1 cut(s)	392
CseI	GACGC	1 cut(s)	422
Csp6I	GTAC	2 cut(s)	202, 1565
CviAII	CATG	9 cut(s)	963, 1475, 1672, 1801, 1864, 1921, 2081, 2174, 2190
CviQI	GTAC	2 cut(s)	202, 1565
DdeI	CTNAG	5 cut(s)	15, 833, 1251, 1682, 1791
DinI	GGCGCC	2 cut(s)	258, 960
DraI	TTTAAA	1 cut(s)	2110
EaeI	YGGCCR	7 cut(s)	3, 311, 458, 810, 915, 939, 1363
Eam1104I	CTCTTC	1 cut(s)	146
EarI	CTCTTC	1 cut(s)	146
EciI	GGCGGA	2 cut(s)	268, 293
Ecl136II	GAGCTC	3 cut(s)	178, 466, 615
Eco130I	CCWWGG	1 cut(s)	962
Eco24I	GRGCYC	3 cut(s)	180, 468, 617
Eco32I	GATATC	1 cut(s)	1522
Eco47I	GGWCC	1 cut(s)	816
Eco53kI	GAGCTC	3 cut(s)	178, 466, 615
Eco57I	CTGAAG	5 cut(s)	503, 714, 897, 1467, 1931
Eco88I	CYCGRG	1 cut(s)	168
EcoICRI	GAGCTC	3 cut(s)	178, 466, 615
EcoNI	CCTNNNNNAGG	1 cut(s)	622
EcoO109I	RGGNCCY	1 cut(s)	816
EcoRI	GAATTC	1 cut(s)	976
EcoRII	CCWGG	1 cut(s)	623
EcoRV	GATATC	1 cut(s)	1522
EcoT14I	CCWWGG	1 cut(s)	962
EcoT38I	GRGCYC	3 cut(s)	180, 468, 617
EgeI	GGCGCC	2 cut(s)	258, 960
EheI	GGCGCC	2 cut(s)	258, 960
ErhI	CCWWGG	1 cut(s)	962
FaeI	CATG	9 cut(s)	966, 1478, 1675, 1804, 1867, 1924, 2084, 2177, 2193
FalI	AAGNNNNNCTT	2 cut(s)	1896, 1928
FaqI	GGGAC	2 cut(s)	829, 1078
FatI	CATG	9 cut(s)	962, 1474, 1671, 1800, 1863, 1920, 2080, 2173, 2189
FauI	CCCGC	1 cut(s)	72
FbaI	TGATCA	1 cut(s)	930
FblI	GTMKAC	2 cut(s)	11, 1373
FokI	GGATG	9 cut(s)	472, 807, 1033, 1043, 1052, 1553, 1712, 1796, 2105
FriOI	GRGCYC	3 cut(s)	180, 468, 617
FspBI	CTAG	3 cut(s)	1515, 1898, 2203
FspI	TGCGCA	1 cut(s)	590
GlaI	GCGC	7 cut(s)	258, 426, 549, 590, 780, 960, 1879
GsaI	CCCAGC	2 cut(s)	690, 1065
GsuI	CTGGAG	1 cut(s)	5
HaeII	RGCGCY	2 cut(s)	260, 962
HapII	CCGG	9 cut(s)	169, 254, 260, 435, 446, 701, 813, 856, 1640
HgaI	GACGC	1 cut(s)	422
HhaI	GCGC	7 cut(s)	259, 427, 550, 591, 781, 961, 1880
Hin1I	GRCGYC	4 cut(s)	257, 414, 717, 959
Hin1II	CATG	9 cut(s)	966, 1478, 1675, 1804, 1867, 1924, 2084, 2177, 2193
Hin6I	GCGC	7 cut(s)	257, 425, 548, 589, 779, 959, 1878
HinP1I	GCGC	7 cut(s)	257, 425, 548, 589, 779, 959, 1878
HincII	GTYRAC	2 cut(s)	12, 2157
HindII	GTYRAC	2 cut(s)	12, 2157
HpaI	GTTAAC	1 cut(s)	2157
HpaII	CCGG	9 cut(s)	169, 254, 260, 435, 446, 701, 813, 856, 1640
HphI	GGTGA	1 cut(s)	227
Hpy166II	GTNNAC	4 cut(s)	12, 1374, 2157, 2171
Hpy188I	TCNGA	8 cut(s)	157, 325, 694, 825, 1030, 1252, 2017, 2055
Hpy8I	GTNNAC	4 cut(s)	12, 1374, 2157, 2171
Hpy99I	CGWCG	6 cut(s)	49, 416, 638, 719, 829, 1464
HpyAV	CCTTC	4 cut(s)	1168, 1922, 2071, 2124
HpyCH4III	ACNGT	4 cut(s)	595, 742, 1103, 1978
HpyCH4IV	ACGT	3 cut(s)	636, 717, 827
HpyF3I	CTNAG	5 cut(s)	15, 833, 1251, 1682, 1791
HpySE526I	ACGT	3 cut(s)	636, 717, 827
Hsp92I	GRCGYC	4 cut(s)	257, 414, 717, 959
Hsp92II	CATG	9 cut(s)	966, 1478, 1675, 1804, 1867, 1924, 2084, 2177, 2193
HspAI	GCGC	7 cut(s)	257, 425, 548, 589, 779, 959, 1878
KasI	GGCGCC	2 cut(s)	256, 958
KflI	GGGWCCC	1 cut(s)	816
Kpn2I	TCCGGA	2 cut(s)	700, 1639
KroI	GCCGGC	1 cut(s)	253
KroNI	GCCGGC	1 cut(s)	255
Ksp22I	TGATCA	1 cut(s)	930
KspAI	GTTAAC	1 cut(s)	2157
KspI	CCGCGG	1 cut(s)	498
LmnI	GCTCC	5 cut(s)	24, 620, 1285, 1642, 1837
LweI	GCATC	4 cut(s)	494, 1628, 1690, 1777
MaeI	CTAG	3 cut(s)	1515, 1898, 2203
MaeII	ACGT	3 cut(s)	636, 717, 827
MaeIII	GTNAC	2 cut(s)	1179, 1978
MbiI	CCGCTC	2 cut(s)	67, 353
MboII	GAAGA	5 cut(s)	133, 589, 707, 1222, 1457
MfeI	CAATTG	1 cut(s)	1556
MflI	RGATCY	3 cut(s)	438, 697, 1826
MhlI	GDGCHC	3 cut(s)	180, 468, 617
MlsI	TGGCCA	4 cut(s)	313, 460, 917, 1365
MluNI	TGGCCA	4 cut(s)	313, 460, 917, 1365
Mly113I	GGCGCC	2 cut(s)	257, 959
MlyI	GAGTC	5 cut(s)	7, 17, 206, 257, 2170
MmeI	TCCRAC	5 cut(s)	848, 873, 1677, 1744, 1874
Mox20I	TGGCCA	4 cut(s)	313, 460, 917, 1365
MreI	CGCCGGCG	1 cut(s)	253
MroI	TCCGGA	2 cut(s)	700, 1639
MroNI	GCCGGC	1 cut(s)	253
MroXI	GAANNNNTTC	2 cut(s)	2028, 2060
MscI	TGGCCA	4 cut(s)	313, 460, 917, 1365
MseI	TTAA	6 cut(s)	639, 654, 1353, 1962, 2109, 2156
MslI	CAYNNNNRTG	3 cut(s)	887, 1013, 1805
Msp20I	TGGCCA	4 cut(s)	313, 460, 917, 1365
MspA1I	CMGCKG	1 cut(s)	497
MspI	CCGG	9 cut(s)	169, 254, 260, 435, 446, 701, 813, 856, 1640
MspR9I	CCNGG	6 cut(s)	169, 170, 436, 625, 814, 857
MunI	CAATTG	1 cut(s)	1556
Mva1269I	GAATGC	1 cut(s)	1438
MvaI	CCWGG	1 cut(s)	625
MvnI	CGCG	4 cut(s)	44, 425, 497, 548
NaeI	GCCGGC	1 cut(s)	255
NarI	GGCGCC	2 cut(s)	257, 959
NciI	CCSGG	5 cut(s)	169, 170, 436, 814, 857
NcoI	CCATGG	1 cut(s)	962
NgoMIV	GCCGGC	1 cut(s)	253
NlaIII	CATG	9 cut(s)	966, 1478, 1675, 1804, 1867, 1924, 2084, 2177, 2193
NlaIV	GGNNCC	7 cut(s)	58, 258, 817, 818, 960, 1386, 1839
NmeAIII	GCCGAG	3 cut(s)	31, 199, 967
NruI	TCGCGA	1 cut(s)	44
NsbI	TGCGCA	1 cut(s)	590
NspI	RCATGY	3 cut(s)	1478, 1867, 2193
PaeI	GCATGC	2 cut(s)	1867, 2193
PagI	TCATGA	1 cut(s)	1671
PaqCI	CACCTGC	1 cut(s)	1073
PcsI	WCGNNNNNNNCGW	1 cut(s)	509
PctI	GAATGC	1 cut(s)	1438
PdiI	GCCGGC	1 cut(s)	255
PdmI	GAANNNNTTC	2 cut(s)	2028, 2060
PfeI	GAWTC	6 cut(s)	49, 500, 524, 1456, 1675, 2012
PflMI	CCANNNNNTGG	1 cut(s)	1206
PleI	GAGTC	5 cut(s)	7, 16, 206, 257, 2169
PluTI	GGCGCC	2 cut(s)	260, 962
PpsI	GAGTC	5 cut(s)	7, 16, 206, 257, 2169
PpuMI	RGGWCCY	1 cut(s)	816
PshBI	ATTAAT	1 cut(s)	1353
Psp124BI	GAGCTC	3 cut(s)	180, 468, 617
Psp5II	RGGWCCY	1 cut(s)	816
Psp6I	CCWGG	1 cut(s)	623
PspFI	CCCAGC	2 cut(s)	686, 1061
PspGI	CCWGG	1 cut(s)	623
PspN4I	GGNNCC	7 cut(s)	58, 258, 817, 818, 960, 1386, 1839
PspPI	GGNCC	4 cut(s)	56, 171, 816, 1384
PspPPI	RGGWCCY	1 cut(s)	816
PstI	CTGCAG	1 cut(s)	870
PstNI	CAGNNNCTG	1 cut(s)	408
PsuI	RGATCY	3 cut(s)	438, 697, 1826
RruI	TCGCGA	1 cut(s)	44
RsaI	GTAC	2 cut(s)	203, 1566
RsaNI	GTAC	2 cut(s)	202, 1565
RseI	CAYNNNNRTG	3 cut(s)	887, 1013, 1805
SacI	GAGCTC	3 cut(s)	180, 468, 617
SacII	CCGCGG	1 cut(s)	498
SalI	GTCGAC	1 cut(s)	10
SaqAI	TTAA	6 cut(s)	639, 654, 1353, 1962, 2109, 2156
Sau96I	GGNCC	4 cut(s)	56, 171, 816, 1384
SchI	GAGTC	5 cut(s)	7, 17, 206, 257, 2170
ScrFI	CCNGG	6 cut(s)	169, 170, 436, 625, 814, 857
SduI	GDGCHC	3 cut(s)	180, 468, 617
SfaNI	GCATC	4 cut(s)	494, 1628, 1690, 1777
SfcI	CTRYAG	2 cut(s)	866, 1868
SfoI	GGCGCC	2 cut(s)	258, 960
Sfr303I	CCGCGG	1 cut(s)	498
SgrAI	CRCCGGYG	1 cut(s)	253
SgrBI	CCGCGG	1 cut(s)	498
SinI	GGWCC	1 cut(s)	816
SmaI	CCCGGG	1 cut(s)	170
SmiMI	CAYNNNNRTG	3 cut(s)	887, 1013, 1805
SmlI	CTYRAG	2 cut(s)	32, 610
SmoI	CTYRAG	2 cut(s)	32, 610
SphI	GCATGC	2 cut(s)	1867, 2193
SspDI	GGCGCC	2 cut(s)	256, 958
SspMI	CTAG	3 cut(s)	1515, 1898, 2203
SstI	GAGCTC	3 cut(s)	180, 468, 617
StyD4I	CCNGG	6 cut(s)	167, 168, 434, 623, 812, 855
StyI	CCWWGG	1 cut(s)	962
TaaI	ACNGT	4 cut(s)	595, 742, 1103, 1978
TaiI	ACGT	3 cut(s)	639, 720, 830
TaqI	TCGA	2 cut(s)	11, 392
TatI	WGTACW	1 cut(s)	1564
TauI	GCSGC	6 cut(s)	434, 511, 562, 840, 1149, 1706
TfiI	GAWTC	6 cut(s)	49, 500, 524, 1456, 1675, 2012
Tru1I	TTAA	6 cut(s)	639, 654, 1353, 1962, 2109, 2156
Tru9I	TTAA	6 cut(s)	639, 654, 1353, 1962, 2109, 2156
TscAI	CASTG	4 cut(s)	987, 1233, 1434, 1494
TspDTI	ATGAA	8 cut(s)	661, 790, 1489, 1557, 1623, 1677, 2037, 2190
TspGWI	ACGGA	2 cut(s)	478, 1720
TspMI	CCCGGG	1 cut(s)	168
TspRI	CASTG	4 cut(s)	987, 1233, 1434, 1494
Van91I	CCANNNNNTGG	1 cut(s)	1206
VpaK11BI	GGWCC	1 cut(s)	816
VspI	ATTAAT	1 cut(s)	1353
XagI	CCTNNNNNAGG	1 cut(s)	622
XapI	RAATTY	4 cut(s)	976, 1245, 1496, 1775
XceI	RCATGY	3 cut(s)	1478, 1867, 2193
XcmI	CCANNNNNNNNNTGG	1 cut(s)	889
XmaI	CCCGGG	1 cut(s)	168
XmiI	GTMKAC	2 cut(s)	11, 1373
XmnI	GAANNNNTTC	2 cut(s)	2028, 2060
XspI	CTAG	3 cut(s)	1515, 1898, 2203
ZraI	GACGTC	1 cut(s)	718

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.