Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006889.1

Orthogroup ID

OG0004551

Physical Location & Seq

Genomic Coordinates Forward (+)

22141 .. 26800

Gene Structure 4660 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006889.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2478 bp

atggcggagtcgactgagcatcagcaactggcggccattctcggtcctgagcccgccgccactttccaaaccgtaatctcccacttaatctcctccccctcctctttgcaaaccctaatctccgacctcatctcctccgagaagcggtccgaggccgagctcgtcttcaacatctgcaagcaggccgatcacgagtcgctttctctcaaactcgctcagcttctcgaggtctctcccgacgagaagacccgaaccatgtcctccattctcctccggaagcaactactcacccccgacctgtggcgaatactctctcctaacaccatatccaccctcaaacatactctattatcttgtattcaacgcgaggacaccccaacatcgatttcgaaggccatctcctacgccgtgtcggagctcgcctccgcagtgttgttcgccgaaggctggccggagctcttgccctttctgttccaatccacctcttacgatgcgccgccgaagcttcaggaatgttccttcttgattttcgctcagctctcgtacttctttaccccgtttaagaaggaattacacaccgtcttcttgtactgcttgagctcctccacaaggtcagatgaagttaagatagctgcgtttagtgctgtggtcaatttcattcggtgtttgccctactctgaagatgaggataggtttcatgacgtcttgatagaaatgatgagaacagtgatgggggaattgaacaaagggaaggagatcatggcacaggaagcgatcaagttgttcattgaattggccgggacccatccgtcattgcacagccgcaacgggcagatcatccgggctatgctgcagattgctgaagccatagatgtcttggaacaagggacgaggcacttggccattgagtttctgattactctggccgaggccggagagcgtgcaccatggataatgaggaggtgtcgggagtttgttggtctactttttcccattttaatgaggatggtttcaaatgtcaaggatgatccctcatggcatacagctgagactgatgatgacattgccttgggtgtgagtggtgattactgtgtagggcaggagtgtttgcataggcttgccattgccttgggtggcaataacattgttccaattgcgttagaacactttactgcccattttgctgcacccgagtggcccaagcatcatgcagcattgattgcccttgctcaaatcgctgagggttgctctgaggtaatgataaaagatttggagcaagtggtggcaatggttttgaactcccttgaacatccacatattcgggtaaggtggtcagctattaatgcagttggccagttgtctacttatttggccccagacctgcaagttcaatatcatcaacaggtgttttctgctctgaatgccactatatatggtttgcagaaccgtcatctactggcacatgctgcttcagcactgcaaaaattcattgagaaatgtgccagggatatcttgacaccttatttggatgaagtggtttctcaattggttgtacttttgcagagtgagatacaaatggtgcatgtagaagcattgactgctttggcattagttgttgtttcatttccggaccaattccaaaaatactatgaagatgtcatgattcccctgagagttatgttgttggatgccactaataacccggtttggtccaagcccgtggagtgtattagcctcgctggtatggctgttggaaaggagaaattcagggatgatgctaagaaagtcatggaagtgctgatgtcttttcaaggatctcaaatggagctagatgacccaactgcaagttgcatgctacagatatgcgctgacctgtgcaagtgtctaggacaagatttccttccttacatgggtgctgttatgcctcctttgcttcagtttgttcaaattaagcctgttgaaactgttacctccgcaaatgacaatagtgatatggatgaatctgatgatgaaagtatggaaacaattactcttggagataaaaggattagaatcaagactagtgtattggaggaaaaagttacagcttgcaatttgctgtgttgctatgctgatgaactgaaggaaggattctttccatggatcgatcaggttgttccaacgttagttccacttatatcttatatccatgtaaaagtgcggaagtctgctgtttcagcaatgccgaagctactgctttctgcaaagttagctatagagaaaagacaagcccaaggatgtaatgaaacctatataaagaaattgtctgaccacatccttccagctctggtggaagcatcacatcaggaaactgatagagaaatcactgcaataatattggatgcgttaaatgaatgcatacagatatctggaccacttcgagatgaagccatgtcacatgcacctagtcgaggtgataaagcagggatcactccctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000060 GO:0001101 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0031090 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032386 GO:0032388 GO:0032879 GO:0032880 GO:0033036 GO:0033157 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0042221 GO:0042277 GO:0042306 GO:0042307 GO:0042886 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046822 GO:0046824 GO:0046907 GO:0048518 GO:0050789 GO:0050896 GO:0051049 GO:0051050 GO:0051169 GO:0051170 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0060341 GO:0065007 GO:0070013 GO:0070201 GO:0070727 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071702 GO:0071705 GO:0072594 GO:0090087 GO:0090316 GO:1900180 GO:1900182 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1903827 GO:1903829 GO:1904589 GO:1904591 GO:1904951

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HEAT HEAT_2 HEAT_EZ

Protein Analysis

825

Amino Acids

91.83

Weight (kDa)

5.18

Isoelectric Point (pI)

47.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004551)

Species	Orthologous Gene IDs
malus_domestica	MD11G1005500.v1.1
rosa_chinensis	RchiOBHm_Chr5g0054081 RchiOBHm_Chr5g0054171 RchiOBHm_Chr5g0054201 RchiOBHm_Chr5g0054251
rosa_laevigata	RLG00000034915 RLG00000034916 RLG00000034918 RLG00000034920 RLG00000034921
rosa_multiflora	Rmu_sc0000094.1_g000006 Rmu_sc0000509.1_g000025 Rmu_sc0006889.1_g000007 Rmu_sc0010082.1_g000001 Rmu_sc0023670.1_g000001
rosa_roxburghii	Rroxscaffold_1G00026650 Rroxscaffold_1G00026670
rosa_rugosa	Rorug05G0285300
rosa_samantha	Rh5AG354200 Rh5AG354300 Rh5AG354700 Rh5AG355200 Rh5BG366000 Rh5BG366100 Rh5BG367300 Rh5CG390800 Rh5DG055000 Rh5DG380900 Rh5DG381500
rosa_wichuraiana	Rw5G033390 Rw5G033410 Rw5G033590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	808
AatII	GACGTC	1 cut(s)	705
Acc36I	ACCTGC	1 cut(s)	1389
AccI	GTMKAC	3 cut(s)	11, 982, 1361
AccII	CGCG	1 cut(s)	366
AccIII	TCCGGA	2 cut(s)	273, 1627
AclI	AACGTT	1 cut(s)	2162
AclWI	GGATC	4 cut(s)	1022, 1822, 2150, 2474
AcoI	YGGCCR	6 cut(s)	33, 449, 795, 900, 924, 1351
AcsI	RAATTY	2 cut(s)	1484, 1763
AcuI	CTGAAG	6 cut(s)	491, 699, 882, 1455, 1919, 2141
AcyI	GRCGYC	1 cut(s)	702
AfaI	GTAC	3 cut(s)	545, 590, 1554
AfiI	CCNNNNNNNGG	6 cut(s)	144, 300, 447, 609, 1910, 2450
AhlI	ACTAGT	1 cut(s)	2060
AjnI	CCWGG	1 cut(s)	1502
AjuI	GAANNNNNNNTTGG	2 cut(s)	370, 402
AleI	CACNNNNGTG	1 cut(s)	1192
Alw21I	GWGCWC	5 cut(s)	162, 420, 459, 602, 946
Alw26I	GTCTC	2 cut(s)	235, 1043
Alw44I	GTGCAC	1 cut(s)	942
AlwI	GGATC	4 cut(s)	1022, 1822, 2150, 2474
AlwNI	CAGNNNCTG	1 cut(s)	28
Ama87I	CYCGRG	2 cut(s)	224, 1190
Aor13HI	TCCGGA	2 cut(s)	273, 1627
ApaLI	GTGCAC	1 cut(s)	942
ApeKI	GCWGC	5 cut(s)	632, 850, 1184, 1211, 1466
ApoI	RAATTY	2 cut(s)	1484, 1763
ArsI	GACNNNNNNTTYG	2 cut(s)	1507, 1539
AseI	ATTAAT	1 cut(s)	1341
AspLEI	GCGC	2 cut(s)	496, 1868
AspS9I	GGNCC	8 cut(s)	44, 147, 801, 1197, 1372, 1630, 1710, 2411
AsuC2I	CCSGG	3 cut(s)	799, 842, 1703
AsuHPI	GGTGA	3 cut(s)	280, 1094, 2465
AsuII	TTCGAA	1 cut(s)	389
AvaI	CYCGRG	2 cut(s)	224, 1190
AvaII	GGWCC	6 cut(s)	44, 147, 801, 1630, 1710, 2411
BaeGI	GKGCMC	1 cut(s)	946
BalI	TGGCCA	2 cut(s)	902, 1353
BanII	GRGCYC	5 cut(s)	54, 162, 420, 459, 602
BauI	CACGAG	1 cut(s)	191
BbsI	GAAGAC	3 cut(s)	157, 251, 574
Bbv12I	GWGCWC	5 cut(s)	162, 420, 459, 602, 946
BbvCI	CCTCAGC	1 cut(s)	1239
BbvI	GCAGC	5 cut(s)	619, 837, 1171, 1223, 1453
BccI	CCATC	4 cut(s)	404, 724, 813, 1000
BceAI	ACGGC	1 cut(s)	392
BcgI	CGANNNNNNTGC	2 cut(s)	2215, 2249
BciT130I	CCWGG	1 cut(s)	1504
BcnI	CCSGG	3 cut(s)	799, 842, 1703
BcoDI	GTCTC	2 cut(s)	235, 1043
BcuI	ACTAGT	1 cut(s)	2060
BfaI	CTAG	4 cut(s)	1829, 1886, 2061, 2445
BfmI	CTRYAG	3 cut(s)	851, 1856, 2253
BfuAI	ACCTGC	1 cut(s)	1389
BisI	GCNGC	9 cut(s)	33, 57, 497, 633, 823, 851, 1185, 1212, 1467
BlpI	GCTNAGC	2 cut(s)	216, 534
BlsI	GCNGC	9 cut(s)	34, 58, 498, 634, 824, 852, 1186, 1213, 1468
Bme1390I	CCNGG	4 cut(s)	799, 842, 1504, 1703
Bme18I	GGWCC	6 cut(s)	44, 147, 801, 1630, 1710, 2411
BmeT110I	CYCGRG	2 cut(s)	224, 1190
BmgT120I	GGNCC	8 cut(s)	44, 147, 801, 1197, 1372, 1630, 1710, 2411
BmiI	GGNNCC	3 cut(s)	802, 803, 1374
BmrFI	CCNGG	4 cut(s)	799, 842, 1504, 1703
BmsI	GCATC	7 cut(s)	28, 481, 1213, 1678, 1765, 2345, 2371
BpiI	GAAGAC	3 cut(s)	157, 251, 574
BplI	GAGNNNNNCTC	4 cut(s)	407, 439, 1232, 1264
Bpu10I	CCTNAGC	2 cut(s)	48, 1239
Bpu1102I	GCTNAGC	2 cut(s)	216, 534
Bpu14I	TTCGAA	1 cut(s)	389
BpuEI	CTTGAG	1 cut(s)	616
BpuMI	CCSGG	3 cut(s)	799, 842, 1703
Bsa29I	ATCGAT	2 cut(s)	383, 2145
BsaBI	GATNNNNATC	1 cut(s)	2051
BsaHI	GRCGYC	1 cut(s)	702
BsaI	GGTCTC	1 cut(s)	235
BsaJI	CCNNGG	9 cut(s)	150, 927, 947, 1068, 1128, 1503, 1719, 2138, 2272
BsaWI	WCCGGW	2 cut(s)	273, 1627
BsaXI	ACNNNNNCTCC	4 cut(s)	74, 104, 116, 146
Bsc4I	CCNNNNNNNGG	6 cut(s)	144, 300, 447, 609, 1910, 2450
Bse1I	ACTGG	3 cut(s)	33, 1354, 1461
Bse3DI	GCAATG	5 cut(s)	812, 1062, 1122, 1293, 2226
Bse8I	GATNNNNATC	1 cut(s)	2051
BseAI	TCCGGA	2 cut(s)	273, 1627
BseBI	CCWGG	1 cut(s)	1504
BseCI	ATCGAT	2 cut(s)	383, 2145
BseDI	CCNNGG	9 cut(s)	150, 927, 947, 1068, 1128, 1503, 1719, 2138, 2272
BseJI	GATNNNNATC	1 cut(s)	2051
BseLI	CCNNNNNNNGG	6 cut(s)	144, 300, 447, 609, 1910, 2450
BseMI	GCAATG	5 cut(s)	812, 1062, 1122, 1293, 2226
BseMII	CTCAG	8 cut(s)	6, 39, 230, 548, 1038, 1230, 1242, 1661
BseNI	ACTGG	3 cut(s)	33, 1354, 1461
BseRI	GAGGAG	6 cut(s)	82, 91, 124, 260, 592, 973
BseSI	GKGCMC	1 cut(s)	946
BseXI	GCAGC	5 cut(s)	619, 837, 1171, 1223, 1453
BsgI	GTGCAG	1 cut(s)	1170
Bsh1236I	CGCG	1 cut(s)	366
BshVI	ATCGAT	2 cut(s)	383, 2145
BsiHKAI	GWGCWC	5 cut(s)	162, 420, 459, 602, 946
BsiHKCI	CYCGRG	2 cut(s)	224, 1190
BsiSI	CCGG	7 cut(s)	274, 452, 798, 841, 933, 1628, 1703
BslFI	GGGAC	2 cut(s)	814, 901
BslI	CCNNNNNNNGG	6 cut(s)	144, 300, 447, 609, 1910, 2450
BsmAI	GTCTC	2 cut(s)	235, 1043
BsmFI	GGGAC	2 cut(s)	814, 901
BsmI	GAATGC	2 cut(s)	1426, 2399
Bso31I	GGTCTC	1 cut(s)	235
BsoBI	CYCGRG	2 cut(s)	224, 1190
Bsp119I	TTCGAA	1 cut(s)	389
Bsp1286I	GDGCHC	6 cut(s)	54, 162, 420, 459, 602, 946
Bsp13I	TCCGGA	2 cut(s)	273, 1627
Bsp143I	GATC	9 cut(s)	187, 756, 774, 834, 1027, 1814, 2142, 2146, 2466
Bsp1720I	GCTNAGC	2 cut(s)	216, 534
Bsp19I	CCATGG	2 cut(s)	947, 2138
BspCNI	CTCAG	8 cut(s)	7, 40, 229, 547, 1039, 1231, 1243, 1662
BspDI	ATCGAT	2 cut(s)	383, 2145
BspEI	TCCGGA	2 cut(s)	273, 1627
BspFNI	CGCG	1 cut(s)	366
BspHI	TCATGA	2 cut(s)	697, 1659
BspLI	GGNNCC	3 cut(s)	802, 803, 1374
BspMAI	CTGCAG	1 cut(s)	855
BspMI	ACCTGC	1 cut(s)	1389
BspPI	GGATC	4 cut(s)	1022, 1822, 2150, 2474
BspT104I	TTCGAA	1 cut(s)	389
BspTNI	GGTCTC	1 cut(s)	235
BsrDI	GCAATG	5 cut(s)	812, 1062, 1122, 1293, 2226
BsrI	ACTGG	3 cut(s)	33, 1354, 1461
BssECI	CCNNGG	9 cut(s)	150, 927, 947, 1068, 1128, 1503, 1719, 2138, 2272
BssMI	GATC	9 cut(s)	187, 756, 774, 834, 1027, 1814, 2142, 2146, 2466
BssNI	GRCGYC	1 cut(s)	702
BssSI	CACGAG	1 cut(s)	191
BssT1I	CCWWGG	5 cut(s)	947, 1068, 1128, 2138, 2272
Bst2BI	CACGAG	1 cut(s)	191
Bst2UI	CCWGG	1 cut(s)	1504
Bst4CI	ACNGT	6 cut(s)	73, 580, 727, 1091, 1448, 1966
BstACI	GRCGYC	1 cut(s)	702
BstAPI	GCANNNNNTGC	3 cut(s)	1220, 1466, 1598
BstBI	TTCGAA	1 cut(s)	389
BstC8I	GCNNGC	9 cut(s)	54, 179, 183, 420, 449, 942, 1119, 1853, 2089
BstDEI	CTNAG	9 cut(s)	15, 48, 216, 534, 1047, 1239, 1251, 1670, 1779
BstDSI	CCRYGG	3 cut(s)	947, 1719, 2138
BstENI	CCTNNNNNAGG	2 cut(s)	607, 2448
BstFNI	CGCG	1 cut(s)	366
BstHHI	GCGC	2 cut(s)	496, 1868
BstKTI	GATC	9 cut(s)	190, 759, 777, 837, 1030, 1817, 2145, 2149, 2469
BstMAI	GTCTC	2 cut(s)	235, 1043
BstMBI	GATC	9 cut(s)	187, 756, 774, 834, 1027, 1814, 2142, 2146, 2466
BstNI	CCWGG	1 cut(s)	1504
BstNSI	RCATGY	4 cut(s)	1466, 1586, 1855, 2441
BstSCI	CCNGG	4 cut(s)	797, 840, 1502, 1701
BstSFI	CTRYAG	3 cut(s)	851, 1856, 2253
BstSLI	GKGCMC	1 cut(s)	946
BstUI	CGCG	1 cut(s)	366
BstV1I	GCAGC	5 cut(s)	619, 837, 1171, 1223, 1453
BstV2I	GAAGAC	3 cut(s)	157, 251, 574
BstX2I	RGATCY	1 cut(s)	1814
BstXI	CCANNNNNNTGG	2 cut(s)	1129, 1720
BstYI	RGATCY	1 cut(s)	1814
Bsu15I	ATCGAT	2 cut(s)	383, 2145
BsuTUI	ATCGAT	2 cut(s)	383, 2145
BtgI	CCRYGG	3 cut(s)	947, 1719, 2138
BtsI	GCAGTG	3 cut(s)	435, 1475, 2364
BtsIMutI	CAGTG	4 cut(s)	435, 732, 1475, 2364
BveI	ACCTGC	1 cut(s)	1389
Cac8I	GCNNGC	9 cut(s)	54, 179, 183, 420, 449, 942, 1119, 1853, 2089
CaiI	CAGNNNCTG	1 cut(s)	28
CciI	TCATGA	2 cut(s)	697, 1659
CfoI	GCGC	2 cut(s)	496, 1868
Cfr13I	GGNCC	8 cut(s)	44, 147, 801, 1197, 1372, 1630, 1710, 2411
ClaI	ATCGAT	2 cut(s)	383, 2145
CpoI	CGGWCCG	1 cut(s)	147
Csp6I	GTAC	3 cut(s)	544, 589, 1553
CspI	CGGWCCG	1 cut(s)	147
CviQI	GTAC	3 cut(s)	544, 589, 1553
DdeI	CTNAG	9 cut(s)	15, 48, 216, 534, 1047, 1239, 1251, 1670, 1779
DpnI	GATC	9 cut(s)	189, 758, 776, 836, 1029, 1816, 2144, 2148, 2468
DpnII	GATC	9 cut(s)	187, 756, 774, 834, 1027, 1814, 2142, 2146, 2466
DrdI	GACNNNNNNGTC	1 cut(s)	808
DseDI	GACNNNNNNGTC	1 cut(s)	808
EaeI	YGGCCR	6 cut(s)	33, 449, 795, 900, 924, 1351
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	4 cut(s)	160, 418, 457, 600
Eco130I	CCWWGG	5 cut(s)	947, 1068, 1128, 2138, 2272
Eco24I	GRGCYC	5 cut(s)	54, 162, 420, 459, 602
Eco31I	GGTCTC	1 cut(s)	235
Eco32I	GATATC	2 cut(s)	1510, 2406
Eco47I	GGWCC	6 cut(s)	44, 147, 801, 1630, 1710, 2411
Eco53kI	GAGCTC	4 cut(s)	160, 418, 457, 600
Eco57I	CTGAAG	6 cut(s)	491, 699, 882, 1455, 1919, 2141
Eco88I	CYCGRG	2 cut(s)	224, 1190
EcoICRI	GAGCTC	4 cut(s)	160, 418, 457, 600
EcoNI	CCTNNNNNAGG	2 cut(s)	607, 2448
EcoO109I	RGGNCCY	1 cut(s)	801
EcoRII	CCWGG	1 cut(s)	1502
EcoRV	GATATC	2 cut(s)	1510, 2406
EcoT14I	CCWWGG	5 cut(s)	947, 1068, 1128, 2138, 2272
EcoT22I	ATGCAT	1 cut(s)	2399
EcoT38I	GRGCYC	5 cut(s)	54, 162, 420, 459, 602
ErhI	CCWWGG	5 cut(s)	947, 1068, 1128, 2138, 2272
FalI	AAGNNNNNCTT	2 cut(s)	1884, 1916
FaqI	GGGAC	2 cut(s)	814, 901
FauI	CCCGC	1 cut(s)	61
FblI	GTMKAC	3 cut(s)	11, 982, 1361
Fnu4HI	GCNGC	9 cut(s)	33, 57, 497, 633, 823, 851, 1185, 1212, 1467
FriOI	GRGCYC	5 cut(s)	54, 162, 420, 459, 602
Fsp4HI	GCNGC	9 cut(s)	33, 57, 497, 633, 823, 851, 1185, 1212, 1467
FspBI	CTAG	4 cut(s)	1829, 1886, 2061, 2445
GlaI	GCGC	2 cut(s)	495, 1867
GluI	GCNGC	9 cut(s)	33, 57, 497, 633, 823, 851, 1185, 1212, 1467
HapII	CCGG	7 cut(s)	274, 452, 798, 841, 933, 1628, 1703
HhaI	GCGC	2 cut(s)	496, 1868
Hin1I	GRCGYC	1 cut(s)	702
Hin6I	GCGC	2 cut(s)	494, 1866
HinP1I	GCGC	2 cut(s)	494, 1866
HincII	GTYRAC	1 cut(s)	12
HindII	GTYRAC	1 cut(s)	12
HindIII	AAGCTT	1 cut(s)	503
HinfI	GANTC	6 cut(s)	8, 194, 1663, 2000, 2052, 2130
HpaII	CCGG	7 cut(s)	274, 452, 798, 841, 933, 1628, 1703
HphI	GGTGA	3 cut(s)	280, 1094, 2465
Hpy166II	GTNNAC	4 cut(s)	12, 944, 983, 1362
Hpy8I	GTNNAC	4 cut(s)	12, 944, 983, 1362
Hpy99I	CGWCG	1 cut(s)	242
HpyAV	CCTTC	9 cut(s)	385, 437, 529, 559, 745, 1910, 2116, 2120, 2327
HpyCH4III	ACNGT	6 cut(s)	73, 580, 727, 1091, 1448, 1966
HpyCH4IV	ACGT	2 cut(s)	702, 2162
HpyF3I	CTNAG	9 cut(s)	15, 48, 216, 534, 1047, 1239, 1251, 1670, 1779
HpySE526I	ACGT	2 cut(s)	702, 2162
Hsp92I	GRCGYC	1 cut(s)	702
HspAI	GCGC	2 cut(s)	494, 1866
KflI	GGGWCCC	1 cut(s)	801
Kpn2I	TCCGGA	2 cut(s)	273, 1627
Kzo9I	GATC	9 cut(s)	187, 756, 774, 834, 1027, 1814, 2142, 2146, 2466
LmnI	GCTCC	5 cut(s)	415, 454, 605, 1273, 1825
Lsp1109I	GCAGC	5 cut(s)	619, 837, 1171, 1223, 1453
LweI	GCATC	7 cut(s)	28, 481, 1213, 1678, 1765, 2345, 2371
MaeI	CTAG	4 cut(s)	1829, 1886, 2061, 2445
MaeII	ACGT	2 cut(s)	702, 2162
MaeIII	GTNAC	3 cut(s)	1966, 2080, 2433
MalI	GATC	9 cut(s)	189, 758, 776, 836, 1029, 1816, 2144, 2148, 2468
MboI	GATC	9 cut(s)	187, 756, 774, 834, 1027, 1814, 2142, 2146, 2466
MboII	GAAGA	5 cut(s)	157, 256, 574, 692, 1664
MfeI	CAATTG	2 cut(s)	1152, 1544
MflI	RGATCY	1 cut(s)	1814
MhlI	GDGCHC	6 cut(s)	54, 162, 420, 459, 602, 946
MlsI	TGGCCA	2 cut(s)	902, 1353
MluNI	TGGCCA	2 cut(s)	902, 1353
MlyI	GAGTC	2 cut(s)	17, 203
MmeI	TCCRAC	5 cut(s)	147, 393, 1665, 1732, 2183
Mox20I	TGGCCA	2 cut(s)	902, 1353
Mph1103I	ATGCAT	1 cut(s)	2399
MroI	TCCGGA	2 cut(s)	273, 1627
MscI	TGGCCA	2 cut(s)	902, 1353
MseI	TTAA	7 cut(s)	86, 561, 624, 998, 1341, 1950, 2387
MslI	CAYNNNNRTG	3 cut(s)	998, 1192, 1793
Msp20I	TGGCCA	2 cut(s)	902, 1353
MspA1I	CMGCKG	1 cut(s)	1046
MspI	CCGG	7 cut(s)	274, 452, 798, 841, 933, 1628, 1703
MspR9I	CCNGG	4 cut(s)	799, 842, 1504, 1703
MunI	CAATTG	2 cut(s)	1152, 1544
Mva1269I	GAATGC	2 cut(s)	1426, 2399
MvaI	CCWGG	1 cut(s)	1504
MvnI	CGCG	1 cut(s)	366
NciI	CCSGG	3 cut(s)	799, 842, 1703
NcoI	CCATGG	2 cut(s)	947, 2138
NdeII	GATC	9 cut(s)	187, 756, 774, 834, 1027, 1814, 2142, 2146, 2466
NlaIV	GGNNCC	3 cut(s)	802, 803, 1374
NmeAIII	GCCGAG	2 cut(s)	181, 952
NmuCI	GTSAC	1 cut(s)	2433
NsiI	ATGCAT	1 cut(s)	2399
NspI	RCATGY	4 cut(s)	1466, 1586, 1855, 2441
NspV	TTCGAA	1 cut(s)	389
OliI	CACNNNNGTG	1 cut(s)	1192
PaeI	GCATGC	1 cut(s)	1855
PaeR7I	CTCGAG	1 cut(s)	224
PagI	TCATGA	2 cut(s)	697, 1659
PctI	GAATGC	2 cut(s)	1426, 2399
PfeI	GAWTC	4 cut(s)	1663, 2000, 2052, 2130
PkrI	GCNGC	9 cut(s)	34, 58, 498, 634, 824, 852, 1186, 1213, 1468
PleI	GAGTC	2 cut(s)	16, 202
PpsI	GAGTC	2 cut(s)	16, 202
PpuMI	RGGWCCY	1 cut(s)	801
PshBI	ATTAAT	1 cut(s)	1341
Psp124BI	GAGCTC	4 cut(s)	162, 420, 459, 602
Psp1406I	AACGTT	1 cut(s)	2162
Psp5II	RGGWCCY	1 cut(s)	801
Psp6I	CCWGG	1 cut(s)	1502
PspGI	CCWGG	1 cut(s)	1502
PspN4I	GGNNCC	3 cut(s)	802, 803, 1374
PspPI	GGNCC	8 cut(s)	44, 147, 801, 1197, 1372, 1630, 1710, 2411
PspPPI	RGGWCCY	1 cut(s)	801
PstI	CTGCAG	1 cut(s)	855
PstNI	CAGNNNCTG	1 cut(s)	28
PsuI	RGATCY	1 cut(s)	1814
PvuII	CAGCTG	1 cut(s)	1046
RsaI	GTAC	3 cut(s)	545, 590, 1554
RsaNI	GTAC	3 cut(s)	544, 589, 1553
RseI	CAYNNNNRTG	3 cut(s)	998, 1192, 1793
Rsr2I	CGGWCCG	1 cut(s)	147
RsrII	CGGWCCG	1 cut(s)	147
SacI	GAGCTC	4 cut(s)	162, 420, 459, 602
SalI	GTCGAC	1 cut(s)	10
SaqAI	TTAA	7 cut(s)	86, 561, 624, 998, 1341, 1950, 2387
SatI	GCNGC	9 cut(s)	33, 57, 497, 633, 823, 851, 1185, 1212, 1467
Sau3AI	GATC	9 cut(s)	187, 756, 774, 834, 1027, 1814, 2142, 2146, 2466
Sau96I	GGNCC	8 cut(s)	44, 147, 801, 1197, 1372, 1630, 1710, 2411
SchI	GAGTC	2 cut(s)	17, 203
ScrFI	CCNGG	4 cut(s)	799, 842, 1504, 1703
SduI	GDGCHC	6 cut(s)	54, 162, 420, 459, 602, 946
SfaNI	GCATC	7 cut(s)	28, 481, 1213, 1678, 1765, 2345, 2371
SfcI	CTRYAG	3 cut(s)	851, 1856, 2253
Sfr274I	CTCGAG	1 cut(s)	224
SfuI	TTCGAA	1 cut(s)	389
SinI	GGWCC	6 cut(s)	44, 147, 801, 1630, 1710, 2411
SlaI	CTCGAG	1 cut(s)	224
SmiMI	CAYNNNNRTG	3 cut(s)	998, 1192, 1793
SmlI	CTYRAG	2 cut(s)	224, 595
SmoI	CTYRAG	2 cut(s)	224, 595
SpeI	ACTAGT	1 cut(s)	2060
SphI	GCATGC	1 cut(s)	1855
SspI	AATATT	1 cut(s)	2376
SspMI	CTAG	4 cut(s)	1829, 1886, 2061, 2445
SstI	GAGCTC	4 cut(s)	162, 420, 459, 602
StyD4I	CCNGG	4 cut(s)	797, 840, 1502, 1701
StyI	CCWWGG	5 cut(s)	947, 1068, 1128, 2138, 2272
TaaI	ACNGT	6 cut(s)	73, 580, 727, 1091, 1448, 1966
TaiI	ACGT	2 cut(s)	705, 2165
TaqI	TCGA	7 cut(s)	11, 225, 383, 389, 2145, 2419, 2449
TaqII	GACCGA	1 cut(s)	32
TatI	WGTACW	2 cut(s)	588, 1552
TauI	GCSGC	4 cut(s)	35, 59, 499, 825
TfiI	GAWTC	4 cut(s)	1663, 2000, 2052, 2130
Tru1I	TTAA	7 cut(s)	86, 561, 624, 998, 1341, 1950, 2387
Tru9I	TTAA	7 cut(s)	86, 561, 624, 998, 1341, 1950, 2387
TscAI	CASTG	4 cut(s)	435, 732, 1482, 2371
TseFI	GTSAC	1 cut(s)	2433
TseI	GCWGC	5 cut(s)	632, 850, 1184, 1211, 1466
Tsp45I	GTSAC	1 cut(s)	2433
TspGWI	ACGGA	1 cut(s)	798
TspRI	CASTG	4 cut(s)	435, 732, 1482, 2371
VneI	GTGCAC	1 cut(s)	942
VpaK11BI	GGWCC	6 cut(s)	44, 147, 801, 1630, 1710, 2411
VspI	ATTAAT	1 cut(s)	1341
XagI	CCTNNNNNAGG	2 cut(s)	607, 2448
XapI	RAATTY	2 cut(s)	1484, 1763
XceI	RCATGY	4 cut(s)	1466, 1586, 1855, 2441
XcmI	CCANNNNNNNNNTGG	1 cut(s)	874
XhoI	CTCGAG	1 cut(s)	224
XmiI	GTMKAC	3 cut(s)	11, 982, 1361
XspI	CTAG	4 cut(s)	1829, 1886, 2061, 2445
ZraI	GACGTC	1 cut(s)	703
Zsp2I	ATGCAT	1 cut(s)	2399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.