Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0004551

Physical Location & Seq

Genomic Coordinates Reverse (-)

56743831 .. 56748489

Gene Structure 4659 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G033410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGGCGGAGTCGACTGAGCATCAGCAACTGGCGGCCATTCTCGGTCCTGAGCCCGCCGCCACTTTCCAAACCGTAATCTCCCACTTAATCTCCTCCCCCTCCTCTTTGCAAACCCTAATCTCCGACCTCATCTCCTCCGAGAAGCGGTCCGAGGCCGAGCACACCTTCAACATCTGCAAGCAGGCCGATCACGAGTCGCTTTCTCTCAATCTCGCTCAGCTTCTCCAGGTCTCTCCCGACGAGAAGACCCGAGCCATGTGCTCCATTCTCCTCCGGAAGCAACTACTCACCGACGACCTGTGGCGAAGACTCTCTCCTAACACCATATCCACCCTCAAACATACTCTATTATCTTGTATTCAACGCGAGGACACCCCAACATCGATTTCGAAGGCCATCTGCTACGCCGTGGCCGAGCTCGCCTCAGCAGAGTTAGAGTTGTTGGGCGGCGAAGGCTGGCCGGAGCTCTTGCCCTTTCAGTTCCAATCCACCTCCTACGATGCGCCGCCGAAGCTTCAGGAATGCTCCTTCTTGATTTTCGATCAGCTCGCGGACTTCTTTACCCCGTTTATAGACGAATTACACACCGTCTTCTTATACTGCTTGAGCTCCTCCACAAGGTCAGATGAAGTTAAGATAGCCGCGTTTAGTGCGGTGGTCAGTTTCATTCGGTGTTTGTCCAGCTCTGAAGATCCGAATATGTTTCACGACGTCTTGATAGAAATGATGAGAACAGTGATGGGGAAATTGAACAAAGGGAAGGAGATCATGGCACAGGAGGCGATCAAGTTGTTCATTGAATTGGCCGGGACCCATCCGACATTGCTCAGCCGCAACGGGCAGATCATCCGGGCTATGCTGCAGATTGCTGAAGCCATAGATGTCTTGGAACAAGGGACGAGGCACTTGGCTATTGAGTTTCTGATTACTCTGGCCGAGGCCGGAGAGCGTGCACCATGGATAATGAGGAGGTGTCGGGAGTTTGTTGGTCTACTTTTTCCCATTTTAATGAGGATGGTTTCAAATGTCAAGGATGATCCCTCATGCCATACTGCTGAGACTGATGATGACATTGCCTTGGGTGTGAGTGGTGATTACTGTGTAGGGCAGGAGTGTTTGCATAGGCTTGCCATTGCCTTGGGTGGCAATAACATTGTTCCAATTGCGTTAGAACACTTTACTTCCCATTTTGCTGCACCCGAGTGGCCCAAGCATCATGCAGCATTGATTGCCCTTGCTCAAATCGCTGAGGGTTGCTCTGAGGTAATGATAAAAGATTTGGAGCAAGTGGTGGCAATGGTTTTGAACTCCCTTGAACATCCACATATTCGGGTAAGGTGGTCAGCTATTAATGCAGTTGGCCACTTGTCTACTTATTTGGCCCCAGACCTGCAAGTTCAATATCATCAACAGGTGTTTTCTGCACTGAATGCCACTATATATGGTTTGCAGAACCGTCATCTACTGGCACATGCTGCTTCAGCACTGCAAAAATTCATTGAGAAATGTGCTAGGAATATCTTGACACCTTATTTGGATGAAGTGGTTTCCCAATTGGTTGTACTTTTGCAGAGTGAGATACAAATGGTGCATGTAGAAGCATTGACTGCTTTGGCATCAGTTGTTGTTTCATTTCCGGACCAATTCCAAAAATACTATGAAGATGTCATGATTCCCCTGAGAGTTATGTTGTTGGATGCCACTAATAACCCGGTTTGGTCCAAGTCCGTGGAGTGTATTAGCCTGGTTGGTATGGCTGTTGGAAAGGAGAAATTCAGGGATGATGCTAAGAAAGTCATGGAAGTGCTGATGTCTTTTCAAGGATCTCAAATGGAGCTAGATGACCCAATTGCAAGTTGCATGCTACAGATATGCGCTGACCTCTGCAAGTGTCTAGGACAAGATTTCCTTCCATACATGGGTGCTGTTATGCCTCCTTTGCTTCAGTTTGTTCAAATTAAGCCTGTTGAAACTGTTACCTCCGCAAATGACAATAGTGATATGGATGAATCTGATGATGAAAGATATCTGGACCACTTCGAGATGAAGCCATGTCACAGGCACTTAGTCGAGGTGATAAAGCAGGGATCACTCCCTAATTTACGTAGGAAAAGCGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000060 GO:0001101 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0031090 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032386 GO:0032388 GO:0032879 GO:0032880 GO:0033036 GO:0033157 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0042221 GO:0042277 GO:0042306 GO:0042307 GO:0042886 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046822 GO:0046824 GO:0046907 GO:0048518 GO:0050789 GO:0050896 GO:0051049 GO:0051050 GO:0051169 GO:0051170 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0060341 GO:0065007 GO:0070013 GO:0070201 GO:0070727 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071702 GO:0071705 GO:0072594 GO:0090087 GO:0090316 GO:1900180 GO:1900182 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1903827 GO:1903829 GO:1904589 GO:1904591 GO:1904951

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HEAT HEAT_2 HEAT_EZ

Protein Analysis

706

Amino Acids

78.79

Weight (kDa)

5.16

Isoelectric Point (pI)

49.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_IPO5	PF25780	128 - 278	5.4e-18	IPO5-like, TPR repeats
Importin_rep_4	PF18808	296 - 387	9.4e-13	Importin repeat
TOR1L1_N	PF24714	373 - 544	3.1e-07	TORTIFOLIA1 N-terminal
HEAT_EZ	PF13513	402 - 456	1.5e-06	HEAT-like repeat
TPR_IMB1	PF25574	489 - 655	8.1e-09	Importin subunit beta-1-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004551)

Species	Orthologous Gene IDs
malus_domestica	MD11G1005500.v1.1
rosa_chinensis	RchiOBHm_Chr5g0054081 RchiOBHm_Chr5g0054171 RchiOBHm_Chr5g0054201 RchiOBHm_Chr5g0054251
rosa_laevigata	RLG00000034915 RLG00000034916 RLG00000034918 RLG00000034920 RLG00000034921
rosa_multiflora	Rmu_sc0000094.1_g000006 Rmu_sc0000509.1_g000025 Rmu_sc0006889.1_g000007 Rmu_sc0010082.1_g000001 Rmu_sc0023670.1_g000001
rosa_roxburghii	Rroxscaffold_1G00026650 Rroxscaffold_1G00026670
rosa_rugosa	Rorug05G0285300
rosa_samantha	Rh5AG354200 Rh5AG354300 Rh5AG354700 Rh5AG355200 Rh5BG366000 Rh5BG366100 Rh5BG367300 Rh5CG390800 Rh5DG055000 Rh5DG380900 Rh5DG381500
rosa_wichuraiana	Rw5G033390 Rw5G033410 Rw5G033590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	714
Acc36I	ACCTGC	1 cut(s)	1398
AccI	GTMKAC	3 cut(s)	11, 991, 1370
AccII	CGCG	3 cut(s)	366, 551, 644
AccIII	TCCGGA	2 cut(s)	273, 1636
AclWI	GGATC	4 cut(s)	686, 1031, 1831, 2095
AcoI	YGGCCR	6 cut(s)	33, 411, 458, 804, 933, 1360
AcsI	RAATTY	2 cut(s)	1493, 1772
AcuI	CTGAAG	5 cut(s)	500, 708, 891, 1464, 1928
AcyI	GRCGYC	1 cut(s)	711
AfaI	GTAC	1 cut(s)	1563
AfiI	CCNNNNNNNGG	3 cut(s)	144, 618, 1919
AjnI	CCWGG	2 cut(s)	225, 1743
AjuI	GAANNNNNNNTTGG	2 cut(s)	370, 402
AleI	CACNNNNGTG	1 cut(s)	1201
AluBI	AGCT	9 cut(s)	220, 418, 466, 514, 547, 609, 684, 1346, 1837
AluI	AGCT	9 cut(s)	220, 418, 466, 514, 547, 609, 684, 1346, 1837
Alw21I	GWGCWC	6 cut(s)	162, 263, 420, 468, 611, 955
Alw26I	GTCTC	2 cut(s)	235, 1052
Alw44I	GTGCAC	1 cut(s)	951
AlwI	GGATC	4 cut(s)	686, 1031, 1831, 2095
AlwNI	CAGNNNCTG	1 cut(s)	28
Ama87I	CYCGRG	2 cut(s)	249, 1199
Aor13HI	TCCGGA	2 cut(s)	273, 1636
ApaLI	GTGCAC	1 cut(s)	951
ApeKI	GCWGC	4 cut(s)	859, 1193, 1220, 1475
ApoI	RAATTY	2 cut(s)	1493, 1772
ArsI	GACNNNNNNTTYG	2 cut(s)	1516, 1548
AseI	ATTAAT	1 cut(s)	1350
AspLEI	GCGC	2 cut(s)	505, 1877
AspS9I	GGNCC	8 cut(s)	44, 147, 810, 1206, 1381, 1639, 1719, 2032
AsuC2I	CCSGG	3 cut(s)	808, 851, 1712
AsuHPI	GGTGA	3 cut(s)	280, 1103, 2086
AsuII	TTCGAA	1 cut(s)	389
AvaI	CYCGRG	2 cut(s)	249, 1199
AvaII	GGWCC	6 cut(s)	44, 147, 810, 1639, 1719, 2032
BaeGI	GKGCMC	1 cut(s)	955
BalI	TGGCCA	1 cut(s)	1362
BanII	GRGCYC	4 cut(s)	54, 420, 468, 611
BauI	CACGAG	1 cut(s)	191
BbsI	GAAGAC	3 cut(s)	251, 313, 583
Bbv12I	GWGCWC	6 cut(s)	162, 263, 420, 468, 611, 955
BbvCI	CCTCAGC	2 cut(s)	424, 1248
BbvI	GCAGC	4 cut(s)	846, 1180, 1232, 1462
BccI	CCATC	4 cut(s)	404, 733, 822, 1009
BceAI	ACGGC	1 cut(s)	392
BcgI	CGANNNNNNTGC	2 cut(s)	240, 274
BciT130I	CCWGG	2 cut(s)	227, 1745
BcnI	CCSGG	3 cut(s)	808, 851, 1712
BcoDI	GTCTC	2 cut(s)	235, 1052
BfaI	CTAG	3 cut(s)	1512, 1838, 1895
BfmI	CTRYAG	2 cut(s)	860, 1865
BfuAI	ACCTGC	1 cut(s)	1398
BlpI	GCTNAGC	2 cut(s)	216, 827
Bme1390I	CCNGG	5 cut(s)	227, 808, 851, 1712, 1745
Bme18I	GGWCC	6 cut(s)	44, 147, 810, 1639, 1719, 2032
BmeT110I	CYCGRG	2 cut(s)	249, 1199
BmgT120I	GGNCC	8 cut(s)	44, 147, 810, 1206, 1381, 1639, 1719, 2032
BmiI	GGNNCC	3 cut(s)	811, 812, 1383
BmrFI	CCNGG	5 cut(s)	227, 808, 851, 1712, 1745
BmsI	GCATC	6 cut(s)	28, 490, 1222, 1625, 1687, 1774
BpiI	GAAGAC	3 cut(s)	251, 313, 583
BplI	GAGNNNNNCTC	4 cut(s)	407, 439, 1241, 1273
BpmI	CTGGAG	1 cut(s)	209
Bpu10I	CCTNAGC	3 cut(s)	48, 424, 1248
Bpu1102I	GCTNAGC	2 cut(s)	216, 827
Bpu14I	TTCGAA	1 cut(s)	389
BpuEI	CTTGAG	1 cut(s)	625
BpuMI	CCSGG	3 cut(s)	808, 851, 1712
Bsa29I	ATCGAT	1 cut(s)	383
BsaAI	YACGTR	1 cut(s)	2105
BsaHI	GRCGYC	1 cut(s)	711
BsaI	GGTCTC	1 cut(s)	235
BsaJI	CCNNGG	7 cut(s)	150, 408, 936, 956, 1077, 1137, 1728
BsaWI	WCCGGW	2 cut(s)	273, 1636
BsaXI	ACNNNNNCTCC	4 cut(s)	74, 104, 116, 146
Bsc4I	CCNNNNNNNGG	3 cut(s)	144, 618, 1919
Bse1I	ACTGG	2 cut(s)	33, 1470
Bse3DI	GCAATG	4 cut(s)	821, 1071, 1131, 1302
BseAI	TCCGGA	2 cut(s)	273, 1636
BseBI	CCWGG	2 cut(s)	227, 1745
BseCI	ATCGAT	1 cut(s)	383
BseDI	CCNNGG	7 cut(s)	150, 408, 936, 956, 1077, 1137, 1728
BseGI	GGATG	9 cut(s)	814, 846, 1020, 1039, 1318, 1543, 1702, 1786, 2011
BseLI	CCNNNNNNNGG	3 cut(s)	144, 618, 1919
BseMI	GCAATG	4 cut(s)	821, 1071, 1131, 1302
BseMII	CTCAG	9 cut(s)	6, 39, 230, 438, 841, 1047, 1239, 1251, 1670
BseNI	ACTGG	2 cut(s)	33, 1470
BseRI	GAGGAG	6 cut(s)	82, 91, 124, 260, 601, 982
BseSI	GKGCMC	1 cut(s)	955
BseXI	GCAGC	4 cut(s)	846, 1180, 1232, 1462
BsgI	GTGCAG	2 cut(s)	1179, 1407
Bsh1236I	CGCG	3 cut(s)	366, 551, 644
BshVI	ATCGAT	1 cut(s)	383
BsiHKAI	GWGCWC	6 cut(s)	162, 263, 420, 468, 611, 955
BsiHKCI	CYCGRG	2 cut(s)	249, 1199
BsiSI	CCGG	7 cut(s)	274, 461, 807, 850, 942, 1637, 1712
BslFI	GGGAC	2 cut(s)	823, 910
BslI	CCNNNNNNNGG	3 cut(s)	144, 618, 1919
BsmAI	GTCTC	2 cut(s)	235, 1052
BsmFI	GGGAC	2 cut(s)	823, 910
BsmI	GAATGC	2 cut(s)	527, 1435
Bso31I	GGTCTC	1 cut(s)	235
BsoBI	CYCGRG	2 cut(s)	249, 1199
Bsp119I	TTCGAA	1 cut(s)	389
Bsp1286I	GDGCHC	7 cut(s)	54, 162, 263, 420, 468, 611, 955
Bsp13I	TCCGGA	2 cut(s)	273, 1636
Bsp143I	GATC	9 cut(s)	187, 541, 691, 765, 783, 843, 1036, 1823, 2087
Bsp1720I	GCTNAGC	2 cut(s)	216, 827
Bsp19I	CCATGG	1 cut(s)	956
BspCNI	CTCAG	9 cut(s)	7, 40, 229, 437, 840, 1048, 1240, 1252, 1671
BspDI	ATCGAT	1 cut(s)	383
BspEI	TCCGGA	2 cut(s)	273, 1636
BspFNI	CGCG	3 cut(s)	366, 551, 644
BspHI	TCATGA	1 cut(s)	1668
BspLI	GGNNCC	3 cut(s)	811, 812, 1383
BspMAI	CTGCAG	1 cut(s)	864
BspMI	ACCTGC	1 cut(s)	1398
BspPI	GGATC	4 cut(s)	686, 1031, 1831, 2095
BspT104I	TTCGAA	1 cut(s)	389
BspTNI	GGTCTC	1 cut(s)	235
BsrDI	GCAATG	4 cut(s)	821, 1071, 1131, 1302
BsrI	ACTGG	2 cut(s)	33, 1470
BssECI	CCNNGG	7 cut(s)	150, 408, 936, 956, 1077, 1137, 1728
BssMI	GATC	9 cut(s)	187, 541, 691, 765, 783, 843, 1036, 1823, 2087
BssNI	GRCGYC	1 cut(s)	711
BssSI	CACGAG	1 cut(s)	191
BssT1I	CCWWGG	3 cut(s)	956, 1077, 1137
Bst2BI	CACGAG	1 cut(s)	191
Bst2UI	CCWGG	2 cut(s)	227, 1745
Bst4CI	ACNGT	6 cut(s)	73, 589, 736, 1100, 1457, 1975
BstACI	GRCGYC	1 cut(s)	711
BstAPI	GCANNNNNTGC	4 cut(s)	1229, 1430, 1475, 1607
BstBAI	YACGTR	1 cut(s)	2105
BstBI	TTCGAA	1 cut(s)	389
BstC8I	GCNNGC	9 cut(s)	54, 179, 183, 420, 458, 549, 951, 1128, 1862
BstDSI	CCRYGG	3 cut(s)	408, 956, 1728
BstENI	CCTNNNNNAGG	1 cut(s)	616
BstF5I	GGATG	9 cut(s)	814, 846, 1020, 1039, 1318, 1543, 1702, 1786, 2011
BstFNI	CGCG	3 cut(s)	366, 551, 644
BstHHI	GCGC	2 cut(s)	505, 1877
BstKTI	GATC	9 cut(s)	190, 544, 694, 768, 786, 846, 1039, 1826, 2090
BstMAI	GTCTC	2 cut(s)	235, 1052
BstMBI	GATC	9 cut(s)	187, 541, 691, 765, 783, 843, 1036, 1823, 2087
BstNI	CCWGG	2 cut(s)	227, 1745
BstNSI	RCATGY	3 cut(s)	1475, 1595, 1864
BstSCI	CCNGG	5 cut(s)	225, 806, 849, 1710, 1743
BstSFI	CTRYAG	2 cut(s)	860, 1865
BstSLI	GKGCMC	1 cut(s)	955
BstSNI	TACGTA	1 cut(s)	2105
BstUI	CGCG	3 cut(s)	366, 551, 644
BstV1I	GCAGC	4 cut(s)	846, 1180, 1232, 1462
BstV2I	GAAGAC	3 cut(s)	251, 313, 583
BstX2I	RGATCY	2 cut(s)	691, 1823
BstXI	CCANNNNNNTGG	2 cut(s)	1138, 1729
BstYI	RGATCY	2 cut(s)	691, 1823
Bsu15I	ATCGAT	1 cut(s)	383
BsuTUI	ATCGAT	1 cut(s)	383
BtgI	CCRYGG	3 cut(s)	408, 956, 1728
BtsCI	GGATG	9 cut(s)	814, 846, 1020, 1039, 1318, 1543, 1702, 1786, 2011
BtsI	GCAGTG	1 cut(s)	1484
BtsIMutI	CAGTG	3 cut(s)	741, 1424, 1484
BveI	ACCTGC	1 cut(s)	1398
Cac8I	GCNNGC	9 cut(s)	54, 179, 183, 420, 458, 549, 951, 1128, 1862
CaiI	CAGNNNCTG	1 cut(s)	28
CciI	TCATGA	1 cut(s)	1668
CfoI	GCGC	2 cut(s)	505, 1877
Cfr13I	GGNCC	8 cut(s)	44, 147, 810, 1206, 1381, 1639, 1719, 2032
ClaI	ATCGAT	1 cut(s)	383
CpoI	CGGWCCG	1 cut(s)	147
Csp6I	GTAC	1 cut(s)	1562
CspI	CGGWCCG	1 cut(s)	147
CviQI	GTAC	1 cut(s)	1562
DpnI	GATC	9 cut(s)	189, 543, 693, 767, 785, 845, 1038, 1825, 2089
DpnII	GATC	9 cut(s)	187, 541, 691, 765, 783, 843, 1036, 1823, 2087
EaeI	YGGCCR	6 cut(s)	33, 411, 458, 804, 933, 1360
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	3 cut(s)	418, 466, 609
Eco105I	TACGTA	1 cut(s)	2105
Eco130I	CCWWGG	3 cut(s)	956, 1077, 1137
Eco24I	GRGCYC	4 cut(s)	54, 420, 468, 611
Eco31I	GGTCTC	1 cut(s)	235
Eco32I	GATATC	1 cut(s)	2027
Eco47I	GGWCC	6 cut(s)	44, 147, 810, 1639, 1719, 2032
Eco53kI	GAGCTC	3 cut(s)	418, 466, 609
Eco57I	CTGAAG	5 cut(s)	500, 708, 891, 1464, 1928
Eco88I	CYCGRG	2 cut(s)	249, 1199
EcoICRI	GAGCTC	3 cut(s)	418, 466, 609
EcoNI	CCTNNNNNAGG	1 cut(s)	616
EcoO109I	RGGNCCY	1 cut(s)	810
EcoRII	CCWGG	2 cut(s)	225, 1743
EcoRV	GATATC	1 cut(s)	2027
EcoT14I	CCWWGG	3 cut(s)	956, 1077, 1137
EcoT38I	GRGCYC	4 cut(s)	54, 420, 468, 611
ErhI	CCWWGG	3 cut(s)	956, 1077, 1137
FalI	AAGNNNNNCTT	2 cut(s)	1893, 1925
FaqI	GGGAC	2 cut(s)	823, 910
FauI	CCCGC	1 cut(s)	61
FblI	GTMKAC	3 cut(s)	11, 991, 1370
FokI	GGATG	9 cut(s)	801, 833, 1027, 1046, 1305, 1550, 1709, 1793, 2018
FriOI	GRGCYC	4 cut(s)	54, 420, 468, 611
FspBI	CTAG	3 cut(s)	1512, 1838, 1895
GlaI	GCGC	2 cut(s)	504, 1876
GsuI	CTGGAG	1 cut(s)	209
HapII	CCGG	7 cut(s)	274, 461, 807, 850, 942, 1637, 1712
HhaI	GCGC	2 cut(s)	505, 1877
Hin1I	GRCGYC	1 cut(s)	711
Hin6I	GCGC	2 cut(s)	503, 1875
HinP1I	GCGC	2 cut(s)	503, 1875
HincII	GTYRAC	1 cut(s)	12
HindII	GTYRAC	1 cut(s)	12
HindIII	AAGCTT	1 cut(s)	512
HinfI	GANTC	5 cut(s)	8, 194, 309, 1672, 2009
HpaII	CCGG	7 cut(s)	274, 461, 807, 850, 942, 1637, 1712
HphI	GGTGA	3 cut(s)	280, 1103, 2086
Hpy166II	GTNNAC	4 cut(s)	12, 953, 992, 1371
Hpy8I	GTNNAC	4 cut(s)	12, 953, 992, 1371
Hpy99I	CGWCG	3 cut(s)	242, 296, 713
HpyAV	CCTTC	6 cut(s)	175, 385, 446, 538, 754, 1919
HpyCH4III	ACNGT	6 cut(s)	73, 589, 736, 1100, 1457, 1975
HpyCH4IV	ACGT	2 cut(s)	711, 2104
HpySE526I	ACGT	2 cut(s)	711, 2104
Hsp92I	GRCGYC	1 cut(s)	711
HspAI	GCGC	2 cut(s)	503, 1875
KflI	GGGWCCC	1 cut(s)	810
Kpn2I	TCCGGA	2 cut(s)	273, 1636
Kzo9I	GATC	9 cut(s)	187, 541, 691, 765, 783, 843, 1036, 1823, 2087
LmnI	GCTCC	6 cut(s)	266, 463, 530, 614, 1282, 1834
Lsp1109I	GCAGC	4 cut(s)	846, 1180, 1232, 1462
LweI	GCATC	6 cut(s)	28, 490, 1222, 1625, 1687, 1774
MaeI	CTAG	3 cut(s)	1512, 1838, 1895
MaeII	ACGT	2 cut(s)	711, 2104
MaeIII	GTNAC	2 cut(s)	1975, 2054
MalI	GATC	9 cut(s)	189, 543, 693, 767, 785, 845, 1038, 1825, 2089
MboI	GATC	9 cut(s)	187, 541, 691, 765, 783, 843, 1036, 1823, 2087
MboII	GAAGA	5 cut(s)	256, 318, 583, 701, 1673
MfeI	CAATTG	3 cut(s)	1161, 1553, 1848
MflI	RGATCY	2 cut(s)	691, 1823
MhlI	GDGCHC	7 cut(s)	54, 162, 263, 420, 468, 611, 955
MlsI	TGGCCA	1 cut(s)	1362
MluNI	TGGCCA	1 cut(s)	1362
MlyI	GAGTC	3 cut(s)	17, 203, 303
MmeI	TCCRAC	4 cut(s)	147, 842, 1674, 1741
Mox20I	TGGCCA	1 cut(s)	1362
MroI	TCCGGA	2 cut(s)	273, 1636
MscI	TGGCCA	1 cut(s)	1362
MseI	TTAA	5 cut(s)	86, 633, 1007, 1350, 1959
MslI	CAYNNNNRTG	3 cut(s)	1007, 1201, 1802
Msp20I	TGGCCA	1 cut(s)	1362
MspI	CCGG	7 cut(s)	274, 461, 807, 850, 942, 1637, 1712
MspR9I	CCNGG	5 cut(s)	227, 808, 851, 1712, 1745
MunI	CAATTG	3 cut(s)	1161, 1553, 1848
Mva1269I	GAATGC	2 cut(s)	527, 1435
MvaI	CCWGG	2 cut(s)	227, 1745
MvnI	CGCG	3 cut(s)	366, 551, 644
NciI	CCSGG	3 cut(s)	808, 851, 1712
NcoI	CCATGG	1 cut(s)	956
NdeII	GATC	9 cut(s)	187, 541, 691, 765, 783, 843, 1036, 1823, 2087
NlaIV	GGNNCC	3 cut(s)	811, 812, 1383
NmeAIII	GCCGAG	3 cut(s)	181, 439, 961
NmuCI	GTSAC	1 cut(s)	2054
NspI	RCATGY	3 cut(s)	1475, 1595, 1864
NspV	TTCGAA	1 cut(s)	389
OliI	CACNNNNGTG	1 cut(s)	1201
PaeI	GCATGC	1 cut(s)	1864
PagI	TCATGA	1 cut(s)	1668
PcsI	WCGNNNNNNNCGW	1 cut(s)	411
PctI	GAATGC	2 cut(s)	527, 1435
PfeI	GAWTC	2 cut(s)	1672, 2009
PleI	GAGTC	3 cut(s)	16, 202, 303
PpsI	GAGTC	3 cut(s)	16, 202, 303
Ppu21I	YACGTR	1 cut(s)	2105
PpuMI	RGGWCCY	1 cut(s)	810
PshBI	ATTAAT	1 cut(s)	1350
Psp124BI	GAGCTC	3 cut(s)	420, 468, 611
Psp5II	RGGWCCY	1 cut(s)	810
Psp6I	CCWGG	2 cut(s)	225, 1743
PspGI	CCWGG	2 cut(s)	225, 1743
PspN4I	GGNNCC	3 cut(s)	811, 812, 1383
PspPI	GGNCC	8 cut(s)	44, 147, 810, 1206, 1381, 1639, 1719, 2032
PspPPI	RGGWCCY	1 cut(s)	810
PstI	CTGCAG	1 cut(s)	864
PstNI	CAGNNNCTG	1 cut(s)	28
PsuI	RGATCY	2 cut(s)	691, 1823
RsaI	GTAC	1 cut(s)	1563
RsaNI	GTAC	1 cut(s)	1562
RseI	CAYNNNNRTG	3 cut(s)	1007, 1201, 1802
Rsr2I	CGGWCCG	1 cut(s)	147
RsrII	CGGWCCG	1 cut(s)	147
SacI	GAGCTC	3 cut(s)	420, 468, 611
SalI	GTCGAC	1 cut(s)	10
SaqAI	TTAA	5 cut(s)	86, 633, 1007, 1350, 1959
Sau3AI	GATC	9 cut(s)	187, 541, 691, 765, 783, 843, 1036, 1823, 2087
Sau96I	GGNCC	8 cut(s)	44, 147, 810, 1206, 1381, 1639, 1719, 2032
SchI	GAGTC	3 cut(s)	17, 203, 303
ScrFI	CCNGG	5 cut(s)	227, 808, 851, 1712, 1745
SduI	GDGCHC	7 cut(s)	54, 162, 263, 420, 468, 611, 955
SfaNI	GCATC	6 cut(s)	28, 490, 1222, 1625, 1687, 1774
SfcI	CTRYAG	2 cut(s)	860, 1865
SfuI	TTCGAA	1 cut(s)	389
SinI	GGWCC	6 cut(s)	44, 147, 810, 1639, 1719, 2032
SmiMI	CAYNNNNRTG	3 cut(s)	1007, 1201, 1802
SmlI	CTYRAG	1 cut(s)	604
SmoI	CTYRAG	1 cut(s)	604
SnaBI	TACGTA	1 cut(s)	2105
SphI	GCATGC	1 cut(s)	1864
SspMI	CTAG	3 cut(s)	1512, 1838, 1895
SstI	GAGCTC	3 cut(s)	420, 468, 611
StyD4I	CCNGG	5 cut(s)	225, 806, 849, 1710, 1743
StyI	CCWWGG	3 cut(s)	956, 1077, 1137
TaaI	ACNGT	6 cut(s)	73, 589, 736, 1100, 1457, 1975
TaiI	ACGT	2 cut(s)	714, 2107
TaqI	TCGA	6 cut(s)	11, 383, 389, 540, 2040, 2070
TaqII	GACCGA	1 cut(s)	32
TatI	WGTACW	1 cut(s)	1561
TauI	GCSGC	6 cut(s)	35, 59, 450, 508, 644, 834
TfiI	GAWTC	2 cut(s)	1672, 2009
Tru1I	TTAA	5 cut(s)	86, 633, 1007, 1350, 1959
Tru9I	TTAA	5 cut(s)	86, 633, 1007, 1350, 1959
TscAI	CASTG	3 cut(s)	741, 1431, 1491
TseFI	GTSAC	1 cut(s)	2054
TseI	GCWGC	4 cut(s)	859, 1193, 1220, 1475
Tsp45I	GTSAC	1 cut(s)	2054
TspGWI	ACGGA	1 cut(s)	1717
TspRI	CASTG	3 cut(s)	741, 1431, 1491
VneI	GTGCAC	1 cut(s)	951
VpaK11BI	GGWCC	6 cut(s)	44, 147, 810, 1639, 1719, 2032
VspI	ATTAAT	1 cut(s)	1350
XagI	CCTNNNNNAGG	1 cut(s)	616
XapI	RAATTY	2 cut(s)	1493, 1772
XceI	RCATGY	3 cut(s)	1475, 1595, 1864
XcmI	CCANNNNNNNNNTGG	1 cut(s)	883
XmiI	GTMKAC	3 cut(s)	11, 991, 1370
XspI	CTAG	3 cut(s)	1512, 1838, 1895
ZraI	GACGTC	1 cut(s)	712

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.