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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G59210 AT5G59210 |
| fragaria_vesca | FvH4_2g37740 FvH4_3g37100 FvH4_3g37100 |
| malus_domestica | MD03G1084900.v1.1 MD11G1092400.v1.1 |
| prunus_persica | Prupe.6G068200_v2.0.a1 |
| pyrus_communis | pycom11g07770 |
| rosa_chinensis | RchiOBHm_Chr5g0066731 RchiOBHm_Chr5g0066821 |
| rosa_laevigata | RLG00000035876 |
| rosa_multiflora | Rmu_sc0000605.1_g000050 |
| rosa_roxburghii | Rroxscaffold_1G00014280 Rroxscaffold_1G00014310 Rroxscaffold_1G00014340 Rroxscaffold_1G00014360 Rroxscaffold_1G00014490 Rroxscaffold_1G00014520 |
| rosa_rugosa | Rorug05G0379000 Rorug05G0379000 |
| rosa_samantha | Rh5AG438200 Rh5AG438400 Rh5BG454000 Rh5BG454600 Rh5BG455400 Rh5CG476300 Rh5CG476900 Rh5CG477500 Rh5DG469100 Rh5DG470200 |
| rosa_wichuraiana | Rw5G040960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 823 |
| AccII | CGCG | 1 cut(s) | 591 |
| AciI | CCGC | 2 cut(s) | 28, 1279 |
| AclI | AACGTT | 2 cut(s) | 35, 271 |
| AclWI | GGATC | 3 cut(s) | 103, 375, 1107 |
| AcoI | YGGCCR | 1 cut(s) | 732 |
| AcsI | RAATTY | 2 cut(s) | 45, 217 |
| AcuI | CTGAAG | 1 cut(s) | 1101 |
| AdeI | CACNNNGTG | 1 cut(s) | 506 |
| AfaI | GTAC | 1 cut(s) | 300 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 37, 859, 1018 |
| AflII | CTTAAG | 1 cut(s) | 962 |
| AgeI | ACCGGT | 1 cut(s) | 1216 |
| AgsI | TTSAA | 3 cut(s) | 236, 277, 806 |
| AjnI | CCWGG | 1 cut(s) | 1011 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 659, 691 |
| Alw21I | GWGCWC | 2 cut(s) | 511, 981 |
| Alw26I | GTCTC | 2 cut(s) | 168, 1247 |
| Alw44I | GTGCAC | 1 cut(s) | 507 |
| AlwI | GGATC | 3 cut(s) | 103, 375, 1107 |
| Ama87I | CYCGRG | 2 cut(s) | 642, 770 |
| AoxI | GGCC | 5 cut(s) | 25, 92, 732, 1014, 1264 |
| ApaI | GGGCCC | 1 cut(s) | 96 |
| ApaLI | GTGCAC | 1 cut(s) | 507 |
| ApeKI | GCWGC | 6 cut(s) | 62, 262, 347, 382, 446, 692 |
| ApoI | RAATTY | 2 cut(s) | 45, 217 |
| AsiGI | ACCGGT | 1 cut(s) | 1216 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 45 |
| AspLEI | GCGC | 2 cut(s) | 152, 591 |
| AspS9I | GGNCC | 3 cut(s) | 92, 93, 1265 |
| AsuC2I | CCSGG | 2 cut(s) | 10, 250 |
| AsuHPI | GGTGA | 1 cut(s) | 961 |
| AvaI | CYCGRG | 2 cut(s) | 642, 770 |
| BaeGI | GKGCMC | 2 cut(s) | 96, 511 |
| BalI | TGGCCA | 1 cut(s) | 734 |
| BanII | GRGCYC | 2 cut(s) | 96, 981 |
| BbsI | GAAGAC | 1 cut(s) | 762 |
| Bbv12I | GWGCWC | 2 cut(s) | 511, 981 |
| BbvCI | CCTCAGC | 2 cut(s) | 435, 1143 |
| BbvI | GCAGC | 6 cut(s) | 49, 249, 359, 369, 458, 704 |
| BccI | CCATC | 3 cut(s) | 659, 832, 1256 |
| BciT130I | CCWGG | 1 cut(s) | 1013 |
| BclI | TGATCA | 1 cut(s) | 535 |
| BcnI | CCSGG | 2 cut(s) | 10, 250 |
| BcoDI | GTCTC | 2 cut(s) | 168, 1247 |
| BfaI | CTAG | 3 cut(s) | 23, 702, 900 |
| BfmI | CTRYAG | 3 cut(s) | 63, 263, 795 |
| BfrI | CTTAAG | 1 cut(s) | 962 |
| BisI | GCNGC | 7 cut(s) | 28, 63, 263, 348, 383, 447, 693 |
| BlsI | GCNGC | 7 cut(s) | 29, 64, 264, 349, 384, 448, 694 |
| Bme1390I | CCNGG | 3 cut(s) | 10, 250, 1013 |
| BmeT110I | CYCGRG | 2 cut(s) | 642, 770 |
| BmgT120I | GGNCC | 3 cut(s) | 92, 93, 1265 |
| BmiI | GGNNCC | 2 cut(s) | 93, 94 |
| BmrFI | CCNGG | 3 cut(s) | 10, 250, 1013 |
| BmrI | ACTGGG | 1 cut(s) | 946 |
| BmsI | GCATC | 7 cut(s) | 26, 334, 400, 433, 458, 656, 771 |
| BmuI | ACTGGG | 1 cut(s) | 946 |
| BpiI | GAAGAC | 1 cut(s) | 762 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 301, 333, 356, 388, 450, 482, 872, 904 |
| BpmI | CTGGAG | 1 cut(s) | 305 |
| Bpu10I | CCTNAGC | 2 cut(s) | 435, 1143 |
| BpuEI | CTTGAG | 3 cut(s) | 305, 377, 1167 |
| BpuMI | CCSGG | 2 cut(s) | 10, 250 |
| Bsa29I | ATCGAT | 1 cut(s) | 120 |
| BsaJI | CCNNGG | 2 cut(s) | 982, 1017 |
| BsaWI | WCCGGW | 1 cut(s) | 1216 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 37, 859, 1018 |
| Bse118I | RCCGGY | 1 cut(s) | 1216 |
| Bse1I | ACTGG | 3 cut(s) | 204, 941, 1063 |
| Bse3DI | GCAATG | 2 cut(s) | 339, 1048 |
| BseBI | CCWGG | 1 cut(s) | 1013 |
| BseCI | ATCGAT | 1 cut(s) | 120 |
| BseDI | CCNNGG | 2 cut(s) | 982, 1017 |
| BseGI | GGATG | 5 cut(s) | 331, 415, 449, 647, 651 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 37, 859, 1018 |
| BseMI | GCAATG | 2 cut(s) | 339, 1048 |
| BseMII | CTCAG | 9 cut(s) | 115, 156, 426, 446, 570, 654, 726, 1134, 1173 |
| BseNI | ACTGG | 3 cut(s) | 204, 941, 1063 |
| BseRI | GAGGAG | 1 cut(s) | 647 |
| BseSI | GKGCMC | 2 cut(s) | 96, 511 |
| BseXI | GCAGC | 6 cut(s) | 49, 249, 359, 369, 458, 704 |
| BseYI | CCCAGC | 1 cut(s) | 378 |
| Bsh1236I | CGCG | 1 cut(s) | 591 |
| BshFI | GGCC | 5 cut(s) | 27, 94, 734, 1016, 1266 |
| BshTI | ACCGGT | 1 cut(s) | 1216 |
| BshVI | ATCGAT | 1 cut(s) | 120 |
| BsiHKAI | GWGCWC | 2 cut(s) | 511, 981 |
| BsiHKCI | CYCGRG | 2 cut(s) | 642, 770 |
| BsiSI | CCGG | 3 cut(s) | 10, 249, 1217 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 37, 859, 1018 |
| BsmAI | GTCTC | 2 cut(s) | 168, 1247 |
| BsmI | GAATGC | 1 cut(s) | 196 |
| BsnI | GGCC | 5 cut(s) | 27, 94, 734, 1016, 1266 |
| BsoBI | CYCGRG | 2 cut(s) | 642, 770 |
| Bsp120I | GGGCCC | 1 cut(s) | 92 |
| Bsp1286I | GDGCHC | 3 cut(s) | 96, 511, 981 |
| Bsp143I | GATC | 6 cut(s) | 97, 108, 280, 367, 535, 1099 |
| BspACI | CCGC | 2 cut(s) | 28, 1279 |
| BspANI | GGCC | 5 cut(s) | 27, 94, 734, 1016, 1266 |
| BspCNI | CTCAG | 9 cut(s) | 114, 157, 427, 447, 571, 655, 725, 1135, 1172 |
| BspDI | ATCGAT | 1 cut(s) | 120 |
| BspFNI | CGCG | 1 cut(s) | 591 |
| BspLI | GGNNCC | 2 cut(s) | 93, 94 |
| BspMAI | CTGCAG | 2 cut(s) | 67, 267 |
| BspPI | GGATC | 3 cut(s) | 103, 375, 1107 |
| BspQI | GCTCTTC | 1 cut(s) | 969 |
| BspTI | CTTAAG | 1 cut(s) | 962 |
| BsrDI | GCAATG | 2 cut(s) | 339, 1048 |
| BsrFI | RCCGGY | 1 cut(s) | 1216 |
| BsrI | ACTGG | 3 cut(s) | 204, 941, 1063 |
| BssAI | RCCGGY | 1 cut(s) | 1216 |
| BssECI | CCNNGG | 2 cut(s) | 982, 1017 |
| BssMI | GATC | 6 cut(s) | 97, 108, 280, 367, 535, 1099 |
| BssT1I | CCWWGG | 1 cut(s) | 1017 |
| Bst2UI | CCWGG | 1 cut(s) | 1013 |
| Bst4CI | ACNGT | 5 cut(s) | 298, 303, 426, 959, 1276 |
| Bst6I | CTCTTC | 1 cut(s) | 969 |
| BstAFI | CTTAAG | 1 cut(s) | 962 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 356 |
| BstC8I | GCNNGC | 5 cut(s) | 15, 60, 639, 736, 1204 |
| BstF5I | GGATG | 5 cut(s) | 331, 415, 449, 647, 651 |
| BstFNI | CGCG | 1 cut(s) | 591 |
| BstHHI | GCGC | 2 cut(s) | 152, 591 |
| BstKTI | GATC | 6 cut(s) | 100, 111, 283, 370, 538, 1102 |
| BstMAI | GTCTC | 2 cut(s) | 168, 1247 |
| BstMBI | GATC | 6 cut(s) | 97, 108, 280, 367, 535, 1099 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 356, 388, 1139 |
| BstNI | CCWGG | 1 cut(s) | 1013 |
| BstSCI | CCNGG | 3 cut(s) | 8, 248, 1011 |
| BstSFI | CTRYAG | 3 cut(s) | 63, 263, 795 |
| BstSLI | GKGCMC | 2 cut(s) | 96, 511 |
| BstUI | CGCG | 1 cut(s) | 591 |
| BstV1I | GCAGC | 6 cut(s) | 49, 249, 359, 369, 458, 704 |
| BstV2I | GAAGAC | 1 cut(s) | 762 |
| BstX2I | RGATCY | 2 cut(s) | 108, 367 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1043 |
| BstYI | RGATCY | 2 cut(s) | 108, 367 |
| Bsu15I | ATCGAT | 1 cut(s) | 120 |
| BsuRI | GGCC | 5 cut(s) | 27, 94, 734, 1016, 1266 |
| BsuTUI | ATCGAT | 1 cut(s) | 120 |
| BtsCI | GGATG | 5 cut(s) | 331, 415, 449, 647, 651 |
| BtsIMutI | CAGTG | 2 cut(s) | 934, 1281 |
| Cac8I | GCNNGC | 5 cut(s) | 15, 60, 639, 736, 1204 |
| CfoI | GCGC | 2 cut(s) | 152, 591 |
| Cfr10I | RCCGGY | 1 cut(s) | 1216 |
| Cfr13I | GGNCC | 3 cut(s) | 92, 93, 1265 |
| ClaI | ATCGAT | 1 cut(s) | 120 |
| Csp6I | GTAC | 1 cut(s) | 299 |
| CspAI | ACCGGT | 1 cut(s) | 1216 |
| CviAII | CATG | 4 cut(s) | 229, 739, 785, 790 |
| CviQI | GTAC | 1 cut(s) | 299 |
| DpnI | GATC | 6 cut(s) | 99, 110, 282, 369, 537, 1101 |
| DpnII | GATC | 6 cut(s) | 97, 108, 280, 367, 535, 1099 |
| DraIII | CACNNNGTG | 1 cut(s) | 506 |
| EaeI | YGGCCR | 1 cut(s) | 732 |
| Eam1104I | CTCTTC | 1 cut(s) | 969 |
| EarI | CTCTTC | 1 cut(s) | 969 |
| Ecl136II | GAGCTC | 1 cut(s) | 979 |
| Eco130I | CCWWGG | 1 cut(s) | 1017 |
| Eco24I | GRGCYC | 2 cut(s) | 96, 981 |
| Eco53kI | GAGCTC | 1 cut(s) | 979 |
| Eco57I | CTGAAG | 1 cut(s) | 1101 |
| Eco88I | CYCGRG | 2 cut(s) | 642, 770 |
| EcoICRI | GAGCTC | 1 cut(s) | 979 |
| EcoO109I | RGGNCCY | 1 cut(s) | 92 |
| EcoRII | CCWGG | 1 cut(s) | 1011 |
| EcoT14I | CCWWGG | 1 cut(s) | 1017 |
| EcoT22I | ATGCAT | 1 cut(s) | 786 |
| EcoT38I | GRGCYC | 2 cut(s) | 96, 981 |
| ErhI | CCWWGG | 1 cut(s) | 1017 |
| FaeI | CATG | 4 cut(s) | 232, 742, 788, 793 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 672, 704, 945, 977 |
| FatI | CATG | 4 cut(s) | 228, 738, 784, 789 |
| FbaI | TGATCA | 1 cut(s) | 535 |
| FblI | GTMKAC | 1 cut(s) | 823 |
| Fnu4HI | GCNGC | 7 cut(s) | 28, 63, 263, 348, 383, 447, 693 |
| FokI | GGATG | 5 cut(s) | 338, 422, 436, 634, 638 |
| FriOI | GRGCYC | 2 cut(s) | 96, 981 |
| Fsp4HI | GCNGC | 7 cut(s) | 28, 63, 263, 348, 383, 447, 693 |
| FspBI | CTAG | 3 cut(s) | 23, 702, 900 |
| GlaI | GCGC | 2 cut(s) | 151, 590 |
| GluI | GCNGC | 7 cut(s) | 28, 63, 263, 348, 383, 447, 693 |
| GsaI | CCCAGC | 1 cut(s) | 382 |
| GsuI | CTGGAG | 1 cut(s) | 305 |
| HaeIII | GGCC | 5 cut(s) | 27, 94, 734, 1016, 1266 |
| HapII | CCGG | 3 cut(s) | 10, 249, 1217 |
| HhaI | GCGC | 2 cut(s) | 152, 591 |
| Hin1II | CATG | 4 cut(s) | 232, 742, 788, 793 |
| Hin6I | GCGC | 2 cut(s) | 150, 589 |
| HinP1I | GCGC | 2 cut(s) | 150, 589 |
| HindIII | AAGCTT | 1 cut(s) | 830 |
| HinfI | GANTC | 8 cut(s) | 5, 159, 593, 848, 943, 987, 1031, 1167 |
| HpaII | CCGG | 3 cut(s) | 10, 249, 1217 |
| HphI | GGTGA | 1 cut(s) | 961 |
| Hpy166II | GTNNAC | 2 cut(s) | 509, 824 |
| Hpy188I | TCNGA | 9 cut(s) | 145, 166, 540, 580, 664, 715, 724, 862, 983 |
| Hpy188III | TCNNGA | 5 cut(s) | 284, 394, 702, 772, 911 |
| Hpy8I | GTNNAC | 2 cut(s) | 509, 824 |
| HpyCH4III | ACNGT | 5 cut(s) | 298, 303, 426, 959, 1276 |
| HpyCH4IV | ACGT | 3 cut(s) | 35, 271, 400 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 356, 388, 1139 |
| HpySE526I | ACGT | 3 cut(s) | 35, 271, 400 |
| Hsp92II | CATG | 4 cut(s) | 232, 742, 788, 793 |
| HspAI | GCGC | 2 cut(s) | 150, 589 |
| Ksp22I | TGATCA | 1 cut(s) | 535 |
| Kzo9I | GATC | 6 cut(s) | 97, 108, 280, 367, 535, 1099 |
| LguI | GCTCTTC | 1 cut(s) | 969 |
| LmnI | GCTCC | 3 cut(s) | 286, 634, 984 |
| Lsp1109I | GCAGC | 6 cut(s) | 49, 249, 359, 369, 458, 704 |
| LweI | GCATC | 7 cut(s) | 26, 334, 400, 433, 458, 656, 771 |
| MaeI | CTAG | 3 cut(s) | 23, 702, 900 |
| MaeII | ACGT | 3 cut(s) | 35, 271, 400 |
| MaeIII | GTNAC | 2 cut(s) | 582, 1270 |
| MalI | GATC | 6 cut(s) | 99, 110, 282, 369, 537, 1101 |
| MboI | GATC | 6 cut(s) | 97, 108, 280, 367, 535, 1099 |
| MfeI | CAATTG | 1 cut(s) | 519 |
| MflI | RGATCY | 2 cut(s) | 108, 367 |
| MhlI | GDGCHC | 3 cut(s) | 96, 511, 981 |
| MlsI | TGGCCA | 1 cut(s) | 734 |
| MluCI | AATT | 8 cut(s) | 45, 217, 519, 555, 623, 674, 809, 892 |
| MluNI | TGGCCA | 1 cut(s) | 734 |
| MlyI | GAGTC | 4 cut(s) | 153, 602, 1025, 1161 |
| MmeI | TCCRAC | 2 cut(s) | 18, 1195 |
| Mox20I | TGGCCA | 1 cut(s) | 734 |
| Mph1103I | ATGCAT | 1 cut(s) | 786 |
| MroXI | GAANNNNTTC | 1 cut(s) | 45 |
| MscI | TGGCCA | 1 cut(s) | 734 |
| MseI | TTAA | 4 cut(s) | 963, 1001, 1095, 1248 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1041, 1250 |
| Msp20I | TGGCCA | 1 cut(s) | 734 |
| MspA1I | CMGCKG | 2 cut(s) | 382, 1142 |
| MspCI | CTTAAG | 1 cut(s) | 962 |
| MspI | CCGG | 3 cut(s) | 10, 249, 1217 |
| MspR9I | CCNGG | 3 cut(s) | 10, 250, 1013 |
| MunI | CAATTG | 1 cut(s) | 519 |
| Mva1269I | GAATGC | 1 cut(s) | 196 |
| MvaI | CCWGG | 1 cut(s) | 1013 |
| MvnI | CGCG | 1 cut(s) | 591 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 356, 388, 1139 |
| NciI | CCSGG | 2 cut(s) | 10, 250 |
| NdeII | GATC | 6 cut(s) | 97, 108, 280, 367, 535, 1099 |
| NlaIII | CATG | 4 cut(s) | 232, 742, 788, 793 |
| NlaIV | GGNNCC | 2 cut(s) | 93, 94 |
| NmuCI | GTSAC | 1 cut(s) | 1270 |
| NsiI | ATGCAT | 1 cut(s) | 786 |
| PaeR7I | CTCGAG | 2 cut(s) | 642, 770 |
| PciSI | GCTCTTC | 1 cut(s) | 969 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 55 |
| PctI | GAATGC | 1 cut(s) | 196 |
| PdmI | GAANNNNTTC | 1 cut(s) | 45 |
| PfeI | GAWTC | 4 cut(s) | 5, 848, 943, 987 |
| PinAI | ACCGGT | 1 cut(s) | 1216 |
| PkrI | GCNGC | 7 cut(s) | 29, 64, 264, 349, 384, 448, 694 |
| PleI | GAGTC | 4 cut(s) | 153, 601, 1025, 1161 |
| PpsI | GAGTC | 4 cut(s) | 153, 601, 1025, 1161 |
| Psp124BI | GAGCTC | 1 cut(s) | 981 |
| Psp1406I | AACGTT | 2 cut(s) | 35, 271 |
| Psp6I | CCWGG | 1 cut(s) | 1011 |
| PspFI | CCCAGC | 1 cut(s) | 378 |
| PspGI | CCWGG | 1 cut(s) | 1011 |
| PspN4I | GGNNCC | 2 cut(s) | 93, 94 |
| PspOMI | GGGCCC | 1 cut(s) | 92 |
| PspPI | GGNCC | 3 cut(s) | 92, 93, 1265 |
| PspXI | VCTCGAGB | 1 cut(s) | 642 |
| PstI | CTGCAG | 2 cut(s) | 67, 267 |
| PsuI | RGATCY | 2 cut(s) | 108, 367 |
| PvuII | CAGCTG | 2 cut(s) | 382, 1142 |
| RsaI | GTAC | 1 cut(s) | 300 |
| RsaNI | GTAC | 1 cut(s) | 299 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1041, 1250 |
| SacI | GAGCTC | 1 cut(s) | 981 |
| SapI | GCTCTTC | 1 cut(s) | 969 |
| SaqAI | TTAA | 4 cut(s) | 963, 1001, 1095, 1248 |
| SatI | GCNGC | 7 cut(s) | 28, 63, 263, 348, 383, 447, 693 |
| Sau3AI | GATC | 6 cut(s) | 97, 108, 280, 367, 535, 1099 |
| Sau96I | GGNCC | 3 cut(s) | 92, 93, 1265 |
| SchI | GAGTC | 4 cut(s) | 153, 602, 1025, 1161 |
| ScrFI | CCNGG | 3 cut(s) | 10, 250, 1013 |
| SduI | GDGCHC | 3 cut(s) | 96, 511, 981 |
| SfaNI | GCATC | 7 cut(s) | 26, 334, 400, 433, 458, 656, 771 |
| SfcI | CTRYAG | 3 cut(s) | 63, 263, 795 |
| Sfr274I | CTCGAG | 2 cut(s) | 642, 770 |
| SlaI | CTCGAG | 2 cut(s) | 642, 770 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1041, 1250 |
| SmlI | CTYRAG | 6 cut(s) | 320, 392, 642, 770, 962, 1182 |
| SmoI | CTYRAG | 6 cut(s) | 320, 392, 642, 770, 962, 1182 |
| Sse9I | AATT | 8 cut(s) | 45, 217, 519, 555, 623, 674, 809, 892 |
| SsiI | CCGC | 2 cut(s) | 28, 1279 |
| SspMI | CTAG | 3 cut(s) | 23, 702, 900 |
| SstI | GAGCTC | 1 cut(s) | 981 |
| StyD4I | CCNGG | 3 cut(s) | 8, 248, 1011 |
| StyI | CCWWGG | 1 cut(s) | 1017 |
| TaaI | ACNGT | 5 cut(s) | 298, 303, 426, 959, 1276 |
| TaiI | ACGT | 3 cut(s) | 38, 274, 403 |
| TaqI | TCGA | 6 cut(s) | 120, 157, 430, 643, 771, 1029 |
| TasI | AATT | 8 cut(s) | 45, 217, 519, 555, 623, 674, 809, 892 |
| TauI | GCSGC | 1 cut(s) | 30 |
| TfiI | GAWTC | 4 cut(s) | 5, 848, 943, 987 |
| Tru1I | TTAA | 4 cut(s) | 963, 1001, 1095, 1248 |
| Tru9I | TTAA | 4 cut(s) | 963, 1001, 1095, 1248 |
| TscAI | CASTG | 2 cut(s) | 941, 1281 |
| TseFI | GTSAC | 1 cut(s) | 1270 |
| TseI | GCWGC | 6 cut(s) | 62, 262, 347, 382, 446, 692 |
| Tsp45I | GTSAC | 1 cut(s) | 1270 |
| TspDTI | ATGAA | 5 cut(s) | 506, 738, 896, 987, 1268 |
| TspRI | CASTG | 2 cut(s) | 941, 1281 |
| Vha464I | CTTAAG | 1 cut(s) | 962 |
| VneI | GTGCAC | 1 cut(s) | 507 |
| XapI | RAATTY | 2 cut(s) | 45, 217 |
| XbaI | TCTAGA | 1 cut(s) | 701 |
| XhoI | CTCGAG | 2 cut(s) | 642, 770 |
| XmiI | GTMKAC | 1 cut(s) | 823 |
| XmnI | GAANNNNTTC | 1 cut(s) | 45 |
| XspI | CTAG | 3 cut(s) | 23, 702, 900 |
| Zsp2I | ATGCAT | 1 cut(s) | 786 |