Pre-mRNA-splicing factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G16860 AT2G16860 |
| fragaria_vesca | FvH4_2g15441 FvH4_2g15441 |
| malus_domestica | MD05G1122700.v1.1 |
| prunus_persica | Prupe.8G166600_v2.0.a1 Prupe.8G166600_v2.0.a1 Prupe.8G166600_v2.0.a1 Prupe.8G166600_v2.0.a1 |
| pyrus_communis | pycom05g11700 |
| rosa_chinensis | RchiOBHm_Chr1g0323251 RchiOBHm_Chr2g0134101 RchiOBHm_Chr6g0278411 RchiOBHm_Chr6g0295751 |
| rosa_laevigata | RLG00000013230 RLG00000019262 RLG00000030344 |
| rosa_multiflora | Rmu_sc0002132.1_g000004 Rmu_sc0002263.1_g000069 Rmu_sc0003092.1_g000001 Rmu_sc0003837.1_g000015 |
| rosa_roxburghii | Rroxscaffold_4G00326720 Rroxscaffold_7G00190370 |
| rosa_rugosa | Rorug01G0037000 Rorug01G0037100 |
| rosa_samantha | Rh1AG054300 Rh1BG047000 Rh1CG055200 Rh1DG059100 Rh2AG367700 Rh2BG373900 Rh6AG042600 Rh6AG226100 Rh6BG230200 Rh6CG233400 Rh6DG224700 |
| rosa_wichuraiana | Rw1G004730 Rw6G003670 Rw6G019720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 318, 683 |
| Acc36I | ACCTGC | 2 cut(s) | 260, 1240 |
| AccB1I | GGYRCC | 2 cut(s) | 284, 290 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 331 |
| AciI | CCGC | 5 cut(s) | 123, 462, 518, 622, 1504 |
| AclWI | GGATC | 1 cut(s) | 852 |
| AcoI | YGGCCR | 1 cut(s) | 1197 |
| AcsI | RAATTY | 4 cut(s) | 527, 724, 772, 1448 |
| AcuI | CTGAAG | 1 cut(s) | 755 |
| AcyI | GRCGYC | 4 cut(s) | 7, 291, 315, 680 |
| AdeI | CACNNNGTG | 1 cut(s) | 1241 |
| AfaI | GTAC | 8 cut(s) | 41, 52, 365, 740, 879, 1274, 1550, 1585 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 331, 458, 837, 1085 |
| AgsI | TTSAA | 9 cut(s) | 406, 532, 709, 730, 814, 988, 1112, 1165, 1519 |
| AjnI | CCWGG | 2 cut(s) | 113, 330 |
| AluBI | AGCT | 9 cut(s) | 439, 547, 553, 616, 642, 818, 1349, 1356, 1420 |
| AluI | AGCT | 9 cut(s) | 439, 547, 553, 616, 642, 818, 1349, 1356, 1420 |
| Alw21I | GWGCWC | 3 cut(s) | 555, 578, 1422 |
| Alw26I | GTCTC | 2 cut(s) | 322, 1390 |
| AlwI | GGATC | 1 cut(s) | 852 |
| Ama87I | CYCGRG | 2 cut(s) | 577, 1574 |
| AoxI | GGCC | 1 cut(s) | 1197 |
| ApeKI | GCWGC | 3 cut(s) | 520, 911, 1356 |
| ApoI | RAATTY | 4 cut(s) | 527, 724, 772, 1448 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 255, 287 |
| AspLEI | GCGC | 1 cut(s) | 293 |
| AspS9I | GGNCC | 2 cut(s) | 307, 718 |
| AsuHPI | GGTGA | 3 cut(s) | 359, 574, 1018 |
| AsuII | TTCGAA | 1 cut(s) | 1094 |
| AvaI | CYCGRG | 2 cut(s) | 577, 1574 |
| AvaII | GGWCC | 2 cut(s) | 307, 718 |
| BanI | GGYRCC | 2 cut(s) | 284, 290 |
| BanII | GRGCYC | 2 cut(s) | 555, 1422 |
| BbsI | GAAGAC | 1 cut(s) | 413 |
| Bbv12I | GWGCWC | 3 cut(s) | 555, 578, 1422 |
| BbvCI | CCTCAGC | 2 cut(s) | 413, 918 |
| BbvI | GCAGC | 3 cut(s) | 507, 898, 1343 |
| BceAI | ACGGC | 1 cut(s) | 783 |
| BciT130I | CCWGG | 2 cut(s) | 115, 332 |
| BcoDI | GTCTC | 2 cut(s) | 322, 1390 |
| BfaI | CTAG | 3 cut(s) | 132, 476, 1181 |
| BfmI | CTRYAG | 1 cut(s) | 1017 |
| BfoI | RGCGCY | 1 cut(s) | 294 |
| BfuAI | ACCTGC | 2 cut(s) | 260, 1240 |
| BisI | GCNGC | 6 cut(s) | 123, 463, 518, 521, 912, 1357 |
| BlsI | GCNGC | 6 cut(s) | 124, 464, 519, 522, 913, 1358 |
| Bme1390I | CCNGG | 2 cut(s) | 115, 332 |
| Bme18I | GGWCC | 2 cut(s) | 307, 718 |
| BmeT110I | CYCGRG | 2 cut(s) | 577, 1574 |
| BmgT120I | GGNCC | 2 cut(s) | 307, 718 |
| BmiI | GGNNCC | 8 cut(s) | 102, 286, 292, 298, 585, 719, 1065, 1469 |
| BmrFI | CCNGG | 2 cut(s) | 115, 332 |
| BmsI | GCATC | 4 cut(s) | 247, 744, 925, 1135 |
| BpiI | GAAGAC | 1 cut(s) | 413 |
| BpmI | CTGGAG | 1 cut(s) | 1053 |
| Bpu10I | CCTNAGC | 2 cut(s) | 413, 918 |
| Bpu14I | TTCGAA | 1 cut(s) | 1094 |
| BpuEI | CTTGAG | 4 cut(s) | 64, 569, 596, 1406 |
| Bsa29I | ATCGAT | 1 cut(s) | 635 |
| BsaBI | GATNNNNATC | 2 cut(s) | 858, 1026 |
| BsaHI | GRCGYC | 4 cut(s) | 7, 291, 315, 680 |
| BsaI | GGTCTC | 1 cut(s) | 1390 |
| BsaJI | CCNNGG | 2 cut(s) | 558, 1200 |
| BsaWI | WCCGGW | 1 cut(s) | 356 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 600, 630 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 331, 458, 837, 1085 |
| Bse118I | RCCGGY | 1 cut(s) | 287 |
| Bse3DI | GCAATG | 2 cut(s) | 1513, 1589 |
| Bse8I | GATNNNNATC | 2 cut(s) | 858, 1026 |
| BseBI | CCWGG | 2 cut(s) | 115, 332 |
| BseCI | ATCGAT | 1 cut(s) | 635 |
| BseDI | CCNNGG | 2 cut(s) | 558, 1200 |
| BseGI | GGATG | 6 cut(s) | 152, 543, 697, 846, 1150, 1255 |
| BseJI | GATNNNNATC | 2 cut(s) | 858, 1026 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 331, 458, 837, 1085 |
| BseMI | GCAATG | 2 cut(s) | 1513, 1589 |
| BseMII | CTCAG | 2 cut(s) | 404, 932 |
| BseRI | GAGGAG | 5 cut(s) | 608, 906, 1406, 1474, 1477 |
| BseXI | GCAGC | 3 cut(s) | 507, 898, 1343 |
| BseYI | CCCAGC | 2 cut(s) | 642, 1245 |
| BsgI | GTGCAG | 2 cut(s) | 506, 1218 |
| Bsh1285I | CGRYCG | 1 cut(s) | 345 |
| BshFI | GGCC | 1 cut(s) | 1199 |
| BshNI | GGYRCC | 2 cut(s) | 284, 290 |
| BshVI | ATCGAT | 1 cut(s) | 635 |
| BsiEI | CGRYCG | 1 cut(s) | 345 |
| BsiHKAI | GWGCWC | 3 cut(s) | 555, 578, 1422 |
| BsiHKCI | CYCGRG | 2 cut(s) | 577, 1574 |
| BsiSI | CCGG | 6 cut(s) | 288, 294, 357, 390, 500, 606 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 331, 458, 837, 1085 |
| BsmAI | GTCTC | 2 cut(s) | 322, 1390 |
| BsmBI | CGTCTC | 1 cut(s) | 322 |
| BsmI | GAATGC | 3 cut(s) | 124, 485, 800 |
| BsnI | GGCC | 1 cut(s) | 1199 |
| Bso31I | GGTCTC | 1 cut(s) | 1390 |
| BsoBI | CYCGRG | 2 cut(s) | 577, 1574 |
| Bsp119I | TTCGAA | 1 cut(s) | 1094 |
| Bsp1286I | GDGCHC | 3 cut(s) | 555, 578, 1422 |
| Bsp1407I | TGTACA | 2 cut(s) | 877, 1272 |
| Bsp143I | GATC | 7 cut(s) | 342, 432, 456, 600, 844, 1302, 1494 |
| Bsp19I | CCATGG | 1 cut(s) | 558 |
| BspACI | CCGC | 5 cut(s) | 123, 462, 518, 622, 1504 |
| BspANI | GGCC | 1 cut(s) | 1199 |
| BspCNI | CTCAG | 2 cut(s) | 405, 931 |
| BspDI | ATCGAT | 1 cut(s) | 635 |
| BspLI | GGNNCC | 8 cut(s) | 102, 286, 292, 298, 585, 719, 1065, 1469 |
| BspMI | ACCTGC | 2 cut(s) | 260, 1240 |
| BspPI | GGATC | 1 cut(s) | 852 |
| BspT104I | TTCGAA | 1 cut(s) | 1094 |
| BspT107I | GGYRCC | 2 cut(s) | 284, 290 |
| BspTNI | GGTCTC | 1 cut(s) | 1390 |
| BsrDI | GCAATG | 2 cut(s) | 1513, 1589 |
| BsrFI | RCCGGY | 1 cut(s) | 287 |
| BsrGI | TGTACA | 2 cut(s) | 877, 1272 |
| BssAI | RCCGGY | 1 cut(s) | 287 |
| BssECI | CCNNGG | 2 cut(s) | 558, 1200 |
| BssMI | GATC | 7 cut(s) | 342, 432, 456, 600, 844, 1302, 1494 |
| BssNI | GRCGYC | 4 cut(s) | 7, 291, 315, 680 |
| BssT1I | CCWWGG | 1 cut(s) | 558 |
| Bst2UI | CCWGG | 2 cut(s) | 115, 332 |
| Bst4CI | ACNGT | 3 cut(s) | 284, 512, 1080 |
| Bst6I | CTCTTC | 2 cut(s) | 1107, 1428 |
| BstACI | GRCGYC | 4 cut(s) | 7, 291, 315, 680 |
| BstAUI | TGTACA | 2 cut(s) | 877, 1272 |
| BstBI | TTCGAA | 1 cut(s) | 1094 |
| BstC8I | GCNNGC | 2 cut(s) | 137, 289 |
| BstDEI | CTNAG | 3 cut(s) | 413, 904, 918 |
| BstDSI | CCRYGG | 1 cut(s) | 558 |
| BstF5I | GGATG | 6 cut(s) | 152, 543, 697, 846, 1150, 1255 |
| BstH2I | RGCGCY | 1 cut(s) | 294 |
| BstHHI | GCGC | 1 cut(s) | 293 |
| BstKTI | GATC | 7 cut(s) | 345, 435, 459, 603, 847, 1305, 1497 |
| BstMAI | GTCTC | 2 cut(s) | 322, 1390 |
| BstMBI | GATC | 7 cut(s) | 342, 432, 456, 600, 844, 1302, 1494 |
| BstMCI | CGRYCG | 1 cut(s) | 345 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 673, 754 |
| BstNI | CCWGG | 2 cut(s) | 115, 332 |
| BstNSI | RCATGY | 1 cut(s) | 1180 |
| BstSCI | CCNGG | 2 cut(s) | 113, 330 |
| BstSFI | CTRYAG | 1 cut(s) | 1017 |
| BstV1I | GCAGC | 3 cut(s) | 507, 898, 1343 |
| BstV2I | GAAGAC | 1 cut(s) | 413 |
| BstX2I | RGATCY | 1 cut(s) | 844 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 17, 1245 |
| BstYI | RGATCY | 1 cut(s) | 844 |
| Bsu15I | ATCGAT | 1 cut(s) | 635 |
| BsuRI | GGCC | 1 cut(s) | 1199 |
| BsuTUI | ATCGAT | 1 cut(s) | 635 |
| BtgI | CCRYGG | 1 cut(s) | 558 |
| BtgZI | GCGATG | 2 cut(s) | 270, 370 |
| BtsCI | GGATG | 6 cut(s) | 152, 543, 697, 846, 1150, 1255 |
| BveI | ACCTGC | 2 cut(s) | 260, 1240 |
| Cac8I | GCNNGC | 2 cut(s) | 137, 289 |
| CfoI | GCGC | 1 cut(s) | 293 |
| Cfr10I | RCCGGY | 1 cut(s) | 287 |
| Cfr13I | GGNCC | 2 cut(s) | 307, 718 |
| ClaI | ATCGAT | 1 cut(s) | 635 |
| CseI | GACGC | 3 cut(s) | 15, 128, 418 |
| Csp6I | GTAC | 8 cut(s) | 40, 51, 364, 739, 878, 1273, 1549, 1584 |
| CviAII | CATG | 6 cut(s) | 559, 791, 1177, 1239, 1315, 1472 |
| CviQI | GTAC | 8 cut(s) | 40, 51, 364, 739, 878, 1273, 1549, 1584 |
| DdeI | CTNAG | 3 cut(s) | 413, 904, 918 |
| DinI | GGCGCC | 1 cut(s) | 292 |
| DpnI | GATC | 7 cut(s) | 344, 434, 458, 602, 846, 1304, 1496 |
| DpnII | GATC | 7 cut(s) | 342, 432, 456, 600, 844, 1302, 1494 |
| DraIII | CACNNNGTG | 1 cut(s) | 1241 |
| EaeI | YGGCCR | 1 cut(s) | 1197 |
| Eam1104I | CTCTTC | 2 cut(s) | 1107, 1428 |
| EarI | CTCTTC | 2 cut(s) | 1107, 1428 |
| Ecl136II | GAGCTC | 2 cut(s) | 553, 1420 |
| Eco130I | CCWWGG | 1 cut(s) | 558 |
| Eco24I | GRGCYC | 2 cut(s) | 555, 1422 |
| Eco31I | GGTCTC | 1 cut(s) | 1390 |
| Eco32I | GATATC | 1 cut(s) | 492 |
| Eco47I | GGWCC | 2 cut(s) | 307, 718 |
| Eco53kI | GAGCTC | 2 cut(s) | 553, 1420 |
| Eco57I | CTGAAG | 1 cut(s) | 755 |
| Eco88I | CYCGRG | 2 cut(s) | 577, 1574 |
| EcoICRI | GAGCTC | 2 cut(s) | 553, 1420 |
| EcoRI | GAATTC | 1 cut(s) | 772 |
| EcoRII | CCWGG | 2 cut(s) | 113, 330 |
| EcoRV | GATATC | 1 cut(s) | 492 |
| EcoT14I | CCWWGG | 1 cut(s) | 558 |
| EcoT38I | GRGCYC | 2 cut(s) | 555, 1422 |
| EgeI | GGCGCC | 1 cut(s) | 292 |
| EheI | GGCGCC | 1 cut(s) | 292 |
| ErhI | CCWWGG | 1 cut(s) | 558 |
| Esp3I | CGTCTC | 1 cut(s) | 322 |
| FaeI | CATG | 6 cut(s) | 562, 794, 1180, 1242, 1318, 1475 |
| FatI | CATG | 6 cut(s) | 558, 790, 1176, 1238, 1314, 1471 |
| Fnu4HI | GCNGC | 6 cut(s) | 123, 463, 518, 521, 912, 1357 |
| FokI | GGATG | 6 cut(s) | 139, 550, 704, 853, 1157, 1262 |
| FriOI | GRGCYC | 2 cut(s) | 555, 1422 |
| Fsp4HI | GCNGC | 6 cut(s) | 123, 463, 518, 521, 912, 1357 |
| FspBI | CTAG | 3 cut(s) | 132, 476, 1181 |
| GlaI | GCGC | 1 cut(s) | 292 |
| GluI | GCNGC | 6 cut(s) | 123, 463, 518, 521, 912, 1357 |
| GsaI | CCCAGC | 2 cut(s) | 646, 1249 |
| GsuI | CTGGAG | 1 cut(s) | 1053 |
| HaeII | RGCGCY | 1 cut(s) | 294 |
| HaeIII | GGCC | 1 cut(s) | 1199 |
| HapII | CCGG | 6 cut(s) | 288, 294, 357, 390, 500, 606 |
| HgaI | GACGC | 3 cut(s) | 15, 128, 418 |
| HhaI | GCGC | 1 cut(s) | 293 |
| Hin1I | GRCGYC | 4 cut(s) | 7, 291, 315, 680 |
| Hin1II | CATG | 6 cut(s) | 562, 794, 1180, 1242, 1318, 1475 |
| Hin6I | GCGC | 1 cut(s) | 291 |
| HinP1I | GCGC | 1 cut(s) | 291 |
| HincII | GTYRAC | 5 cut(s) | 277, 952, 966, 1312, 1402 |
| HindII | GTYRAC | 5 cut(s) | 277, 952, 966, 1312, 1402 |
| HinfI | GANTC | 8 cut(s) | 95, 302, 609, 730, 872, 1027, 1375, 1490 |
| HpaII | CCGG | 6 cut(s) | 288, 294, 357, 390, 500, 606 |
| HphI | GGTGA | 3 cut(s) | 359, 574, 1018 |
| Hpy166II | GTNNAC | 8 cut(s) | 143, 223, 277, 952, 966, 1312, 1402, 1551 |
| Hpy188I | TCNGA | 9 cut(s) | 100, 208, 342, 735, 753, 763, 1263, 1380, 1390 |
| Hpy188III | TCNNGA | 4 cut(s) | 721, 785, 1070, 1574 |
| Hpy8I | GTNNAC | 8 cut(s) | 143, 223, 277, 952, 966, 1312, 1402, 1551 |
| Hpy99I | CGWCG | 6 cut(s) | 9, 284, 317, 451, 499, 512 |
| HpyAV | CCTTC | 6 cut(s) | 173, 535, 982, 997, 1337, 1375 |
| HpyCH4III | ACNGT | 3 cut(s) | 284, 512, 1080 |
| HpyCH4IV | ACGT | 2 cut(s) | 315, 680 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 673, 754 |
| HpyF3I | CTNAG | 3 cut(s) | 413, 904, 918 |
| HpySE526I | ACGT | 2 cut(s) | 315, 680 |
| Hsp92I | GRCGYC | 4 cut(s) | 7, 291, 315, 680 |
| Hsp92II | CATG | 6 cut(s) | 562, 794, 1180, 1242, 1318, 1475 |
| HspAI | GCGC | 1 cut(s) | 291 |
| KasI | GGCGCC | 1 cut(s) | 290 |
| KroI | GCCGGC | 1 cut(s) | 287 |
| KroNI | GCCGGC | 1 cut(s) | 289 |
| Kzo9I | GATC | 7 cut(s) | 342, 432, 456, 600, 844, 1302, 1494 |
| LmnI | GCTCC | 8 cut(s) | 100, 296, 544, 621, 919, 1063, 1346, 1417 |
| Lsp1109I | GCAGC | 3 cut(s) | 507, 898, 1343 |
| LweI | GCATC | 4 cut(s) | 247, 744, 925, 1135 |
| MaeI | CTAG | 3 cut(s) | 132, 476, 1181 |
| MaeII | ACGT | 2 cut(s) | 315, 680 |
| MaeIII | GTNAC | 1 cut(s) | 562 |
| MalI | GATC | 7 cut(s) | 344, 434, 458, 602, 846, 1304, 1496 |
| MboI | GATC | 7 cut(s) | 342, 432, 456, 600, 844, 1302, 1494 |
| MflI | RGATCY | 1 cut(s) | 844 |
| MhlI | GDGCHC | 3 cut(s) | 555, 578, 1422 |
| MluCI | AATT | 8 cut(s) | 263, 367, 527, 724, 772, 983, 992, 1448 |
| Mly113I | GGCGCC | 1 cut(s) | 291 |
| MlyI | GAGTC | 3 cut(s) | 603, 1369, 1484 |
| MroNI | GCCGGC | 1 cut(s) | 287 |
| MseI | TTAA | 3 cut(s) | 1041, 1257, 1600 |
| MslI | CAYNNNNRTG | 1 cut(s) | 571 |
| MspA1I | CMGCKG | 1 cut(s) | 520 |
| MspI | CCGG | 6 cut(s) | 288, 294, 357, 390, 500, 606 |
| MspR9I | CCNGG | 2 cut(s) | 115, 332 |
| Mva1269I | GAATGC | 3 cut(s) | 124, 485, 800 |
| MvaI | CCWGG | 2 cut(s) | 115, 332 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 673, 754 |
| NaeI | GCCGGC | 1 cut(s) | 289 |
| NarI | GGCGCC | 1 cut(s) | 291 |
| NcoI | CCATGG | 1 cut(s) | 558 |
| NdeII | GATC | 7 cut(s) | 342, 432, 456, 600, 844, 1302, 1494 |
| NgoMIV | GCCGGC | 1 cut(s) | 287 |
| NlaIII | CATG | 6 cut(s) | 562, 794, 1180, 1242, 1318, 1475 |
| NlaIV | GGNNCC | 8 cut(s) | 102, 286, 292, 298, 585, 719, 1065, 1469 |
| NmeAIII | GCCGAG | 1 cut(s) | 1225 |
| NmuCI | GTSAC | 1 cut(s) | 562 |
| NspI | RCATGY | 1 cut(s) | 1180 |
| NspV | TTCGAA | 1 cut(s) | 1094 |
| PaeR7I | CTCGAG | 1 cut(s) | 1574 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 465 |
| PctI | GAATGC | 3 cut(s) | 124, 485, 800 |
| PdiI | GCCGGC | 1 cut(s) | 289 |
| PfeI | GAWTC | 5 cut(s) | 95, 302, 730, 872, 1027 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 331 |
| PkrI | GCNGC | 6 cut(s) | 124, 464, 519, 522, 913, 1358 |
| Ple19I | CGATCG | 1 cut(s) | 345 |
| PleI | GAGTC | 3 cut(s) | 603, 1369, 1484 |
| PluTI | GGCGCC | 1 cut(s) | 294 |
| PpsI | GAGTC | 3 cut(s) | 603, 1369, 1484 |
| Psp124BI | GAGCTC | 2 cut(s) | 555, 1422 |
| Psp6I | CCWGG | 2 cut(s) | 113, 330 |
| PspFI | CCCAGC | 2 cut(s) | 642, 1245 |
| PspGI | CCWGG | 2 cut(s) | 113, 330 |
| PspN4I | GGNNCC | 8 cut(s) | 102, 286, 292, 298, 585, 719, 1065, 1469 |
| PspPI | GGNCC | 2 cut(s) | 307, 718 |
| PsuI | RGATCY | 1 cut(s) | 844 |
| PvuI | CGATCG | 1 cut(s) | 345 |
| RsaI | GTAC | 8 cut(s) | 41, 52, 365, 740, 879, 1274, 1550, 1585 |
| RsaNI | GTAC | 8 cut(s) | 40, 51, 364, 739, 878, 1273, 1549, 1584 |
| RseI | CAYNNNNRTG | 1 cut(s) | 571 |
| SacI | GAGCTC | 2 cut(s) | 555, 1422 |
| SaqAI | TTAA | 3 cut(s) | 1041, 1257, 1600 |
| SatI | GCNGC | 6 cut(s) | 123, 463, 518, 521, 912, 1357 |
| Sau3AI | GATC | 7 cut(s) | 342, 432, 456, 600, 844, 1302, 1494 |
| Sau96I | GGNCC | 2 cut(s) | 307, 718 |
| SchI | GAGTC | 3 cut(s) | 603, 1369, 1484 |
| ScrFI | CCNGG | 2 cut(s) | 115, 332 |
| SduI | GDGCHC | 3 cut(s) | 555, 578, 1422 |
| SfaNI | GCATC | 4 cut(s) | 247, 744, 925, 1135 |
| SfcI | CTRYAG | 1 cut(s) | 1017 |
| SfoI | GGCGCC | 1 cut(s) | 292 |
| Sfr274I | CTCGAG | 1 cut(s) | 1574 |
| SfuI | TTCGAA | 1 cut(s) | 1094 |
| SinI | GGWCC | 2 cut(s) | 307, 718 |
| SlaI | CTCGAG | 1 cut(s) | 1574 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 571 |
| SmlI | CTYRAG | 5 cut(s) | 43, 548, 611, 1421, 1574 |
| SmoI | CTYRAG | 5 cut(s) | 43, 548, 611, 1421, 1574 |
| Sse9I | AATT | 8 cut(s) | 263, 367, 527, 724, 772, 983, 992, 1448 |
| SsiI | CCGC | 5 cut(s) | 123, 462, 518, 622, 1504 |
| SspDI | GGCGCC | 1 cut(s) | 290 |
| SspI | AATATT | 1 cut(s) | 806 |
| SspMI | CTAG | 3 cut(s) | 132, 476, 1181 |
| SstI | GAGCTC | 2 cut(s) | 555, 1422 |
| StyD4I | CCNGG | 2 cut(s) | 113, 330 |
| StyI | CCWWGG | 1 cut(s) | 558 |
| TaaI | ACNGT | 3 cut(s) | 284, 512, 1080 |
| TaiI | ACGT | 2 cut(s) | 318, 683 |
| TaqII | GACCGA | 1 cut(s) | 295 |
| TasI | AATT | 8 cut(s) | 263, 367, 527, 724, 772, 983, 992, 1448 |
| TatI | WGTACW | 4 cut(s) | 738, 877, 1272, 1548 |
| TauI | GCSGC | 3 cut(s) | 125, 465, 520 |
| TfiI | GAWTC | 5 cut(s) | 95, 302, 730, 872, 1027 |
| Tru1I | TTAA | 3 cut(s) | 1041, 1257, 1600 |
| Tru9I | TTAA | 3 cut(s) | 1041, 1257, 1600 |
| TseFI | GTSAC | 1 cut(s) | 562 |
| TseI | GCWGC | 3 cut(s) | 520, 911, 1356 |
| Tsp45I | GTSAC | 1 cut(s) | 562 |
| TspDTI | ATGAA | 3 cut(s) | 554, 807, 1349 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 331 |
| VpaK11BI | GGWCC | 2 cut(s) | 307, 718 |
| XapI | RAATTY | 4 cut(s) | 527, 724, 772, 1448 |
| XceI | RCATGY | 1 cut(s) | 1180 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 639, 838 |
| XhoI | CTCGAG | 1 cut(s) | 1574 |
| XspI | CTAG | 3 cut(s) | 132, 476, 1181 |
| ZraI | GACGTC | 2 cut(s) | 316, 681 |