Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003611.1

Orthogroup ID

OG0002763

Physical Location & Seq

Genomic Coordinates Forward (+)

32931 .. 35240

Gene Structure 2310 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2310 bp

atgtggcctgatcttctccgaaaggctaaatatggaggtttgaatgtgattcaaacttatgtgttttggaacattcacgagccagtgaaaggtcaatacaatttttcaggaaactatgatttggtgaggttcattaagcttgttcaagagcatggaatgtatgttacccttcgagttgggccattcattcaagccgaatggaaccatggaggacttccatattggctgaaagaggtccccaacctaatatttcgtactgataatgcaccatacaagtactatatgaagaagtatgttaccatgattgtaaacaagctgaaagaggcgaagctattttttcctcaaggtggcccaatcatattggcacagattgaaaatgagtatgatcatatacagcttgcatataaagacatgggattcagttatgtcagatgggcagcaaggatggccgtaaagcaaaacgctggagtaccatggatcatgtgcaagcagaccgatgctcctgatccggtgattaatacttgtaatggaaggcattgtggagatactttctctgggccaaataagccatacaagcctgctctatggaccgaaaactggacagctcagtacagagtatttggtgatccagcttcacagagacccgcagaagatattgcattttcagttgcccgctttttctcaaagaatggagctctaaccaactactacatgtaccatggtgggactaattttggaagaacaagtgcgatttttacaacaactcgctactatgacgaagcacctcttgacgaatatggtttgccaagggacccaaaatggagtcacctcaaggacttgcacaaggctttgagactatgcaggaagcctttgctttggggagttccacgtgtccaaaacttaggggaaaacctcgaggctcgtttctacgagttgaaaaacaactccaaaatctgtgctgctttcttggccaacaacaactcaaggagtgaagcaattgttaattggcgaggacaagactactaccttccaccgcattccattagcatcctccctgactgcaagaccgtagtctacaatactcaaaccatcgtatcgcaacataatgcaaggaacattgtcagatcaactttggccaacaaaatgagatggatggagtcttcagaacccattccaaccaccgtgcaagttccgatcaataataggacaccgatggagctctacagcttgctaaaagatcagtcagactatgcgtggtacacaaccagccttgaattgaatcccagggacatgtccatgaaggaaagtattcaaccggttttacgaattggaagtctcggtcacgcaatgctggtgtttgtcaatggtgagtatgttggttccggacatgggagccacgacgagaagagctttgtcttccaaaaagttgtgtccttaaaggccggggtcaaccaaatagctttgcttgccatgacagttggtcttccagatagcggagcgtacatggagcacagatatgcagggcctaaagacatagaagttctaggactgaacactggaacaatagatctctcacaaaatgggtgggggcatcaagttggcctgaatggagagaagattcaagtcttcactgaagagggatcgaaacgggttcaatggggtgaaataaatggaccaaaaaaggctctaacatggtacaagacatattttgatgctcctgaagggaatgaccctgtggctattaaaatgtctggtatgggaaaaggaatgatgtgggtgaatggtgagagcattggccggcactggatgtctttcctctctcctctaggacaacctactcaatccgagtaccacatcccaagatccttcatcaagcctacacaaaaccttcttattgttttggaagaggagccagccaagcctaatagcattgagattatgactgtcaacagagataccatttgcagcttcattactgagtatcatcctccaaatgtcaagtcatgggcaagagagaacagcctcttccgacctgttttagatgttgtcagaacatccgcggagttgaaatgtccaaactacaaaaaggttgtcgaagttgagtttgcaagcttcggcgatcctgttggttcatgtggaagctacaccttgggcaaatgcgactcccctgtatctaaagaggttgttgaacagcactgcttgaacaaaactagctgcatagttccgattgaccgcaagctttacttcaagaacaatgatggttgcccagatatcaagaaaacactcgccatccaagtgaagtgtgcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0015925 GO:0016787 GO:0016798 GO:0030312 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BetaGal_dom4_5 Gal_Lectin Glyco_hydro_35

Protein Analysis

769

Amino Acids

87.29

Weight (kDa)

8.81

Isoelectric Point (pI)

38.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	1 - 283	1e-103	Glycosyl hydrolases family 35
Glyco_hydro_42	PF02449	2 - 130	1.2e-06	Beta-galactosidase
GHD	PF17834	307 - 363	1.7e-20	Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd	PF21467	563 - 629	2.8e-24	Beta-galactosidase, galactose-binding domain
SUEL_Lectin	PF02140	689 - 768	5.3e-15	D-galactoside/L-rhamnose binding SUEL lectin domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16730 AT4G35010
fragaria_vesca	FvH4_2g01270 FvH4_4g13900
malus_domestica	MD04G1010100.v1.1 MD05G1121000.v1.1 MD10G1095200.v1.1 MD13G1284600.v1.1
prunus_persica	Prupe.1G009200_v2.0.a1 Prupe.1G009300_v2.0.a1 Prupe.8G164800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0475241 RchiOBHm_Chr4g0415021 RchiOBHm_Chr6g0251931
rosa_laevigata	RLG00000008102 RLG00000015418 RLG00000023857
rosa_multiflora	Rmu_sc0003611.1_g000013 Rmu_sc0008157.1_g000007 Rmu_ssc0000303.1_g000015
rosa_roxburghii	Rroxscaffold_5G00358760 Rroxscaffold_6G00406440
rosa_rugosa	Rorug03G0147300 Rorug04G0131700 Rorug05G0505100 Rorug05G0505200 Rorug05G0505200
rosa_samantha	Rh3AG197300 Rh4AG191000 Rh4BG189100 Rh4CG202000 Rh4DG189500 Rh6AG016400 Rh6BG014400 Rh6CG011300 Rh6DG012600
rosa_wichuraiana	Rw3G017940 Rw4G016250 Rw6G001570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	914
AccI	GTMKAC	1 cut(s)	1074
AccII	CGCG	1 cut(s)	2060
AccIII	TCCGGA	1 cut(s)	1382
AciI	CCGC	7 cut(s)	645, 673, 1034, 1494, 2058, 2060, 2233
AclWI	GGATC	6 cut(s)	485, 500, 620, 1648, 1857, 2114
AcoI	YGGCCR	4 cut(s)	447, 969, 1134, 1795
AcuI	CTGAAG	3 cut(s)	1146, 1653, 1740
AcvI	CACGTG	1 cut(s)	890
AfaI	GTAC	9 cut(s)	256, 278, 471, 611, 716, 1259, 1502, 1697, 1850
AfiI	CCNNNNNNNGG	5 cut(s)	89, 347, 597, 1389, 1493
AflIII	ACRYGT	3 cut(s)	711, 889, 1290
AgeI	ACCGGT	1 cut(s)	1315
AhdI	GACNNNNNGTC	1 cut(s)	1479
AjnI	CCWGG	1 cut(s)	1283
Alw21I	GWGCWC	3 cut(s)	697, 1221, 1512
Alw26I	GTCTC	3 cut(s)	634, 847, 1340
AlwI	GGATC	6 cut(s)	485, 500, 620, 1648, 1857, 2114
Ama87I	CYCGRG	1 cut(s)	914
Aor13HI	TCCGGA	1 cut(s)	1382
ApeKI	GCWGC	4 cut(s)	437, 959, 1965, 2214
ArsI	GACNNNNNNTTYG	6 cut(s)	1318, 1350, 1985, 2017, 2076, 2108
AseI	ATTAAT	1 cut(s)	516
AsiGI	ACCGGT	1 cut(s)	1315
Asp700I	GAANNNNTTC	2 cut(s)	1170, 1308
AspS9I	GGNCC	8 cut(s)	179, 235, 350, 557, 588, 811, 1523, 1673
AsuC2I	CCSGG	1 cut(s)	1444
AsuHPI	GGTGA	8 cut(s)	136, 523, 635, 818, 1379, 1673, 1789, 1796
AvaI	CYCGRG	1 cut(s)	914
AvaII	GGWCC	4 cut(s)	235, 588, 811, 1673
BaeI	ACNNNNGTAYC	2 cut(s)	1077, 1110
BalI	TGGCCA	2 cut(s)	971, 1136
BanII	GRGCYC	2 cut(s)	697, 1221
BauI	CACGAG	1 cut(s)	77
BbrPI	CACGTG	1 cut(s)	890
BbsI	GAAGAC	4 cut(s)	1152, 1408, 1475, 1618
Bbv12I	GWGCWC	3 cut(s)	697, 1221, 1512
BbvI	GCAGC	4 cut(s)	449, 946, 1977, 2201
BccI	CCATC	8 cut(s)	426, 439, 1097, 1143, 1147, 1207, 2252, 2297
BceAI	ACGGC	1 cut(s)	434
BciT130I	CCWGG	1 cut(s)	1285
BclI	TGATCA	1 cut(s)	385
BcnI	CCSGG	1 cut(s)	1444
BcoDI	GTCTC	3 cut(s)	634, 847, 1340
BfaI	CTAG	3 cut(s)	1544, 1826, 2211
BfmI	CTRYAG	1 cut(s)	1222
BglII	AGATCT	1 cut(s)	1567
BisI	GCNGC	4 cut(s)	438, 960, 1966, 2215
BlsI	GCNGC	4 cut(s)	439, 961, 1967, 2216
BmcAI	AGTACT	1 cut(s)	278
Bme1390I	CCNGG	2 cut(s)	1285, 1444
Bme18I	GGWCC	4 cut(s)	235, 588, 811, 1673
BmeRI	GACNNNNNGTC	1 cut(s)	1479
BmeT110I	CYCGRG	1 cut(s)	914
BmgT120I	GGNCC	8 cut(s)	179, 235, 350, 557, 588, 811, 1523, 1673
BmiI	GGNNCC	7 cut(s)	203, 237, 812, 813, 1381, 1394, 1911
BmrFI	CCNGG	2 cut(s)	1285, 1444
BmsI	GCATC	4 cut(s)	487, 1056, 1600, 1702
BoxI	GACNNNNGTC	1 cut(s)	1070
BpiI	GAAGAC	4 cut(s)	1152, 1408, 1475, 1618
BpmI	CTGGAG	1 cut(s)	486
BpuEI	CTTGAG	3 cut(s)	327, 815, 967
BpuMI	CCSGG	1 cut(s)	1444
BsaAI	YACGTR	1 cut(s)	890
BsaI	GGTCTC	1 cut(s)	634
BsaJI	CCNNGG	9 cut(s)	205, 473, 718, 806, 1283, 1284, 1443, 2058, 2148
BsaWI	WCCGGW	3 cut(s)	508, 1315, 1382
BsaXI	ACNNNNNCTCC	2 cut(s)	484, 514
Bsc4I	CCNNNNNNNGG	5 cut(s)	89, 347, 597, 1389, 1493
Bse118I	RCCGGY	2 cut(s)	1315, 1797
Bse1I	ACTGG	4 cut(s)	83, 602, 1561, 1808
Bse3DI	GCAATG	1 cut(s)	1353
BseAI	TCCGGA	1 cut(s)	1382
BseBI	CCWGG	1 cut(s)	1285
BseDI	CCNNGG	9 cut(s)	205, 473, 718, 806, 1283, 1284, 1443, 2058, 2148
BseGI	GGATG	8 cut(s)	450, 1047, 1158, 1812, 1854, 1984, 2054, 2289
BseLI	CCNNNNNNNGG	5 cut(s)	89, 347, 597, 1389, 1493
BseMI	GCAATG	1 cut(s)	1353
BseMII	CTCAG	2 cut(s)	620, 1968
BseNI	ACTGG	4 cut(s)	83, 602, 1561, 1808
BseRI	GAGGAG	2 cut(s)	1812, 1922
BseXI	GCAGC	4 cut(s)	449, 946, 1977, 2201
Bsh1236I	CGCG	1 cut(s)	2060
BshTI	ACCGGT	1 cut(s)	1315
BsiHKAI	GWGCWC	3 cut(s)	697, 1221, 1512
BsiHKCI	CYCGRG	1 cut(s)	914
BsiSI	CCGG	5 cut(s)	509, 1316, 1383, 1443, 1798
BslFI	GGGAC	4 cut(s)	221, 739, 824, 1301
BslI	CCNNNNNNNGG	5 cut(s)	89, 347, 597, 1389, 1493
BsmAI	GTCTC	3 cut(s)	634, 847, 1340
BsmFI	GGGAC	4 cut(s)	221, 739, 824, 1301
BsmI	GAATGC	1 cut(s)	1036
Bso31I	GGTCTC	1 cut(s)	634
BsoBI	CYCGRG	1 cut(s)	914
Bsp1286I	GDGCHC	3 cut(s)	697, 1221, 1512
Bsp13I	TCCGGA	1 cut(s)	1382
Bsp19I	CCATGG	3 cut(s)	205, 473, 718
BspACI	CCGC	7 cut(s)	645, 673, 1034, 1494, 2058, 2060, 2233
BspCNI	CTCAG	2 cut(s)	619, 1969
BspEI	TCCGGA	1 cut(s)	1382
BspFNI	CGCG	1 cut(s)	2060
BspLI	GGNNCC	7 cut(s)	203, 237, 812, 813, 1381, 1394, 1911
BspPI	GGATC	6 cut(s)	485, 500, 620, 1648, 1857, 2114
BspQI	GCTCTTC	1 cut(s)	1400
BspTNI	GGTCTC	1 cut(s)	634
BsrDI	GCAATG	1 cut(s)	1353
BsrFI	RCCGGY	2 cut(s)	1315, 1797
BsrI	ACTGG	4 cut(s)	83, 602, 1561, 1808
BssAI	RCCGGY	2 cut(s)	1315, 1797
BssECI	CCNNGG	9 cut(s)	205, 473, 718, 806, 1283, 1284, 1443, 2058, 2148
BssSI	CACGAG	1 cut(s)	77
BssT1I	CCWWGG	5 cut(s)	205, 473, 718, 806, 2148
Bst2BI	CACGAG	1 cut(s)	77
Bst2UI	CCWGG	1 cut(s)	1285
Bst4CI	ACNGT	4 cut(s)	1069, 1183, 1477, 1945
Bst6I	CTCTTC	4 cut(s)	1400, 1629, 1899, 2030
BstBAI	YACGTR	1 cut(s)	890
BstDEI	CTNAG	4 cut(s)	606, 901, 1977, 2307
BstDSI	CCRYGG	4 cut(s)	205, 473, 718, 2058
BstF5I	GGATG	8 cut(s)	450, 1047, 1158, 1812, 1854, 1984, 2054, 2289
BstFNI	CGCG	1 cut(s)	2060
BstMAI	GTCTC	3 cut(s)	634, 847, 1340
BstMWI	GCNNNNNNNGC	6 cut(s)	446, 565, 574, 968, 1466, 1918
BstNI	CCWGG	1 cut(s)	1285
BstNSI	RCATGY	2 cut(s)	715, 1294
BstPAI	GACNNNNGTC	1 cut(s)	1070
BstSCI	CCNGG	2 cut(s)	1283, 1442
BstSFI	CTRYAG	1 cut(s)	1222
BstUI	CGCG	1 cut(s)	2060
BstV1I	GCAGC	4 cut(s)	449, 946, 1977, 2201
BstV2I	GAAGAC	4 cut(s)	1152, 1408, 1475, 1618
BstX2I	RGATCY	2 cut(s)	1567, 1862
BstYI	RGATCY	2 cut(s)	1567, 1862
BtgI	CCRYGG	4 cut(s)	205, 473, 718, 2058
BtsCI	GGATG	8 cut(s)	450, 1047, 1158, 1812, 1854, 1984, 2054, 2289
BtsI	GCAGTG	1 cut(s)	2194
BtsIMutI	CAGTG	5 cut(s)	90, 1554, 1629, 1801, 2194
Cfr10I	RCCGGY	2 cut(s)	1315, 1797
Cfr13I	GGNCC	8 cut(s)	179, 235, 350, 557, 588, 811, 1523, 1673
Cfr42I	CCGCGG	1 cut(s)	2061
Csp6I	GTAC	9 cut(s)	255, 277, 470, 610, 715, 1258, 1501, 1696, 1849
CspAI	ACCGGT	1 cut(s)	1315
CspCI	CAANNNNNGTGG	2 cut(s)	1565, 1600
CviQI	GTAC	9 cut(s)	255, 277, 470, 610, 715, 1258, 1501, 1696, 1849
DdeI	CTNAG	4 cut(s)	606, 901, 1977, 2307
DriI	GACNNNNNGTC	1 cut(s)	1479
EaeI	YGGCCR	4 cut(s)	447, 969, 1134, 1795
Eam1104I	CTCTTC	4 cut(s)	1400, 1629, 1899, 2030
Eam1105I	GACNNNNNGTC	1 cut(s)	1479
EarI	CTCTTC	4 cut(s)	1400, 1629, 1899, 2030
Ecl136II	GAGCTC	2 cut(s)	695, 1219
Eco130I	CCWWGG	5 cut(s)	205, 473, 718, 806, 2148
Eco24I	GRGCYC	2 cut(s)	697, 1221
Eco31I	GGTCTC	1 cut(s)	634
Eco32I	GATATC	1 cut(s)	2272
Eco47I	GGWCC	4 cut(s)	235, 588, 811, 1673
Eco53kI	GAGCTC	2 cut(s)	695, 1219
Eco57I	CTGAAG	3 cut(s)	1146, 1653, 1740
Eco72I	CACGTG	1 cut(s)	890
Eco88I	CYCGRG	1 cut(s)	914
EcoICRI	GAGCTC	2 cut(s)	695, 1219
EcoO109I	RGGNCCY	3 cut(s)	235, 811, 1523
EcoRII	CCWGG	1 cut(s)	1283
EcoRV	GATATC	1 cut(s)	2272
EcoT14I	CCWWGG	5 cut(s)	205, 473, 718, 806, 2148
EcoT38I	GRGCYC	2 cut(s)	697, 1221
ErhI	CCWWGG	5 cut(s)	205, 473, 718, 806, 2148
FalI	AAGNNNNNCTT	4 cut(s)	771, 803, 2228, 2260
FaqI	GGGAC	4 cut(s)	221, 739, 824, 1301
FauI	CCCGC	2 cut(s)	652, 680
FbaI	TGATCA	1 cut(s)	385
FblI	GTMKAC	1 cut(s)	1074
Fnu4HI	GCNGC	4 cut(s)	438, 960, 1966, 2215
FokI	GGATG	8 cut(s)	457, 1034, 1165, 1819, 1841, 1971, 2041, 2276
FriOI	GRGCYC	2 cut(s)	697, 1221
Fsp4HI	GCNGC	4 cut(s)	438, 960, 1966, 2215
FspBI	CTAG	3 cut(s)	1544, 1826, 2211
GluI	GCNGC	4 cut(s)	438, 960, 1966, 2215
GsuI	CTGGAG	1 cut(s)	486
HapII	CCGG	5 cut(s)	509, 1316, 1383, 1443, 1798
HincII	GTYRAC	2 cut(s)	1450, 1948
HindII	GTYRAC	2 cut(s)	1450, 1948
HindIII	AAGCTT	3 cut(s)	137, 2110, 2237
HinfI	GANTC	7 cut(s)	49, 417, 823, 1157, 1279, 1618, 2162
HpaII	CCGG	5 cut(s)	509, 1316, 1383, 1443, 1798
HphI	GGTGA	8 cut(s)	136, 523, 635, 818, 1379, 1673, 1789, 1796
Hpy166II	GTNNAC	5 cut(s)	310, 1075, 1260, 1450, 1948
Hpy8I	GTNNAC	5 cut(s)	310, 1075, 1260, 1450, 1948
Hpy99I	CGWCG	1 cut(s)	1403
HpyAV	CCTTC	7 cut(s)	179, 525, 1037, 1294, 1715, 1876, 1898
HpyCH4III	ACNGT	4 cut(s)	1069, 1183, 1477, 1945
HpyCH4IV	ACGT	1 cut(s)	889
HpyF10VI	GCNNNNNNNGC	6 cut(s)	446, 565, 574, 968, 1466, 1918
HpyF3I	CTNAG	4 cut(s)	606, 901, 1977, 2307
HpySE526I	ACGT	1 cut(s)	889
KflI	GGGWCCC	1 cut(s)	811
Kpn2I	TCCGGA	1 cut(s)	1382
KroI	GCCGGC	1 cut(s)	1797
KroNI	GCCGGC	1 cut(s)	1799
Ksp22I	TGATCA	1 cut(s)	385
KspI	CCGCGG	1 cut(s)	2061
LguI	GCTCTTC	1 cut(s)	1400
LmnI	GCTCC	8 cut(s)	505, 692, 1216, 1392, 1496, 1507, 1720, 1909
Lsp1109I	GCAGC	4 cut(s)	449, 946, 1977, 2201
LweI	GCATC	4 cut(s)	487, 1056, 1600, 1702
MaeI	CTAG	3 cut(s)	1544, 1826, 2211
MaeII	ACGT	1 cut(s)	889
MaeIII	GTNAC	4 cut(s)	163, 295, 824, 1340
MfeI	CAATTG	1 cut(s)	996
MflI	RGATCY	2 cut(s)	1567, 1862
MhlI	GDGCHC	3 cut(s)	697, 1221, 1512
MlsI	TGGCCA	2 cut(s)	971, 1136
MluCI	AATT	6 cut(s)	100, 730, 996, 1003, 1274, 1326
MluNI	TGGCCA	2 cut(s)	971, 1136
MlyI	GAGTC	3 cut(s)	832, 1166, 2156
MmeI	TCCRAC	2 cut(s)	1199, 2053
Mox20I	TGGCCA	2 cut(s)	971, 1136
MroI	TCCGGA	1 cut(s)	1382
MroNI	GCCGGC	1 cut(s)	1797
MroXI	GAANNNNTTC	2 cut(s)	1170, 1308
MscI	TGGCCA	2 cut(s)	971, 1136
MseI	TTAA	5 cut(s)	135, 516, 1002, 1436, 1743
MslI	CAYNNNNRTG	3 cut(s)	1295, 1515, 2294
Msp20I	TGGCCA	2 cut(s)	971, 1136
MspA1I	CMGCKG	1 cut(s)	2060
MspI	CCGG	5 cut(s)	509, 1316, 1383, 1443, 1798
MspR9I	CCNGG	2 cut(s)	1285, 1444
MunI	CAATTG	1 cut(s)	996
Mva1269I	GAATGC	1 cut(s)	1036
MvaI	CCWGG	1 cut(s)	1285
MvnI	CGCG	1 cut(s)	2060
MwoI	GCNNNNNNNGC	6 cut(s)	446, 565, 574, 968, 1466, 1918
NaeI	GCCGGC	1 cut(s)	1799
NciI	CCSGG	1 cut(s)	1444
NcoI	CCATGG	3 cut(s)	205, 473, 718
NgoMIV	GCCGGC	1 cut(s)	1797
NlaIV	GGNNCC	7 cut(s)	203, 237, 812, 813, 1381, 1394, 1911
NmuCI	GTSAC	2 cut(s)	824, 1340
NspI	RCATGY	2 cut(s)	715, 1294
PaeR7I	CTCGAG	1 cut(s)	914
PasI	CCCWGGG	1 cut(s)	1284
PciI	ACATGT	2 cut(s)	711, 1290
PciSI	GCTCTTC	1 cut(s)	1400
PctI	GAATGC	1 cut(s)	1036
PdiI	GCCGGC	1 cut(s)	1799
PdmI	GAANNNNTTC	2 cut(s)	1170, 1308
PfeI	GAWTC	4 cut(s)	49, 417, 1279, 1618
PinAI	ACCGGT	1 cut(s)	1315
PkrI	GCNGC	4 cut(s)	439, 961, 1967, 2216
PleI	GAGTC	3 cut(s)	831, 1165, 2156
PmaCI	CACGTG	1 cut(s)	890
PmlI	CACGTG	1 cut(s)	890
PpsI	GAGTC	3 cut(s)	831, 1165, 2156
Ppu21I	YACGTR	1 cut(s)	890
PpuMI	RGGWCCY	2 cut(s)	235, 811
PscI	ACATGT	2 cut(s)	711, 1290
PshAI	GACNNNNGTC	1 cut(s)	1070
PshBI	ATTAAT	1 cut(s)	516
Psp124BI	GAGCTC	2 cut(s)	697, 1221
Psp5II	RGGWCCY	2 cut(s)	235, 811
Psp6I	CCWGG	1 cut(s)	1283
PspCI	CACGTG	1 cut(s)	890
PspGI	CCWGG	1 cut(s)	1283
PspN4I	GGNNCC	7 cut(s)	203, 237, 812, 813, 1381, 1394, 1911
PspPI	GGNCC	8 cut(s)	179, 235, 350, 557, 588, 811, 1523, 1673
PspPPI	RGGWCCY	2 cut(s)	235, 811
PspXI	VCTCGAGB	1 cut(s)	914
PsuI	RGATCY	2 cut(s)	1567, 1862
RsaI	GTAC	9 cut(s)	256, 278, 471, 611, 716, 1259, 1502, 1697, 1850
RsaNI	GTAC	9 cut(s)	255, 277, 470, 610, 715, 1258, 1501, 1696, 1849
RseI	CAYNNNNRTG	3 cut(s)	1295, 1515, 2294
SacI	GAGCTC	2 cut(s)	697, 1221
SacII	CCGCGG	1 cut(s)	2061
SapI	GCTCTTC	1 cut(s)	1400
SaqAI	TTAA	5 cut(s)	135, 516, 1002, 1436, 1743
SatI	GCNGC	4 cut(s)	438, 960, 1966, 2215
Sau96I	GGNCC	8 cut(s)	179, 235, 350, 557, 588, 811, 1523, 1673
ScaI	AGTACT	1 cut(s)	278
SchI	GAGTC	3 cut(s)	832, 1166, 2156
ScrFI	CCNGG	2 cut(s)	1285, 1444
SduI	GDGCHC	3 cut(s)	697, 1221, 1512
SfaNI	GCATC	4 cut(s)	487, 1056, 1600, 1702
SfcI	CTRYAG	1 cut(s)	1222
Sfr274I	CTCGAG	1 cut(s)	914
Sfr303I	CCGCGG	1 cut(s)	2061
SgrBI	CCGCGG	1 cut(s)	2061
SinI	GGWCC	4 cut(s)	235, 588, 811, 1673
SlaI	CTCGAG	1 cut(s)	914
SmiMI	CAYNNNNRTG	3 cut(s)	1295, 1515, 2294
SmlI	CTYRAG	4 cut(s)	342, 830, 914, 982
SmoI	CTYRAG	4 cut(s)	342, 830, 914, 982
Sse9I	AATT	6 cut(s)	100, 730, 996, 1003, 1274, 1326
SsiI	CCGC	7 cut(s)	645, 673, 1034, 1494, 2058, 2060, 2233
SspI	AATATT	1 cut(s)	249
SspMI	CTAG	3 cut(s)	1544, 1826, 2211
SstI	GAGCTC	2 cut(s)	697, 1221
StyD4I	CCNGG	2 cut(s)	1283, 1442
StyI	CCWWGG	5 cut(s)	205, 473, 718, 806, 2148
TaaI	ACNGT	4 cut(s)	1069, 1183, 1477, 1945
TaiI	ACGT	1 cut(s)	892
TaqI	TCGA	4 cut(s)	172, 915, 1643, 2094
TaqII	GACCGA	3 cut(s)	509, 605, 1328
TasI	AATT	6 cut(s)	100, 730, 996, 1003, 1274, 1326
TatI	WGTACW	2 cut(s)	276, 609
TfiI	GAWTC	4 cut(s)	49, 417, 1279, 1618
Tru1I	TTAA	5 cut(s)	135, 516, 1002, 1436, 1743
Tru9I	TTAA	5 cut(s)	135, 516, 1002, 1436, 1743
TscAI	CASTG	5 cut(s)	90, 1561, 1636, 1808, 2201
TseFI	GTSAC	2 cut(s)	824, 1340
TseI	GCWGC	4 cut(s)	437, 959, 1965, 2214
Tsp45I	GTSAC	2 cut(s)	824, 1340
TspDTI	ATGAA	7 cut(s)	121, 175, 299, 1313, 1858, 1960, 2121
TspRI	CASTG	5 cut(s)	90, 1561, 1636, 1808, 2201
VpaK11BI	GGWCC	4 cut(s)	235, 588, 811, 1673
VspI	ATTAAT	1 cut(s)	516
XceI	RCATGY	2 cut(s)	715, 1294
XhoI	CTCGAG	1 cut(s)	914
XmiI	GTMKAC	1 cut(s)	1074
XmnI	GAANNNNTTC	2 cut(s)	1170, 1308
XspI	CTAG	3 cut(s)	1544, 1826, 2211
ZrmI	AGTACT	1 cut(s)	278

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.