Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004860.1

Orthogroup ID

OG0002691

Physical Location & Seq

Genomic Coordinates Forward (+)

6440 .. 11710

Gene Structure 5271 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004860.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2994 bp

atggttcatgatttcgaagcttgtgcagattgcactcagaagtgtttgctgattcatgggaataagaaaagtggttcccatattgaaacctcttttttcaaaatcatgtttggaaaacagttttctaaatttatggaattgcctccaaaagttgctcgtattttgttattgtctgatcggagaacttttcttgaagattcacgtggactgcggtggaaagttgcaatatctagtgttaatggttcctgggcctttcaacaaggatggaatgcttttgcactagaccatgacctacaagtaggagattttctggtcttcaattacgttgtgggttcacattttactgttaagatatatgacaactctgggtgtgaagtgaatctttttgagaccatacatcagaacaacagaaatagggttcacacagatggtcagtgccacaccattggtaaaagtacagtgagcaaatccgtttcagatacctttgctggtccagatgcagaaataagtaaatgcttgaatgaagtgcatggtatgaagaaacctctaattatcacagaaaatgcttcagatcacgatgatgatgaaaggtcaaagtgcaagcgcaaagcagaatttgctgacgacatgtcatgtatgatggaaagagaatatggacaccaacaaggagacaacagagtccgtattcttgatttgtctagttttgaatcattcaaaaagataaaaacctgtggcagtgatggaagcaataaagttgctgcagtgaatgaaacacattctcatcatgctgattcatcactgaaattgagaaatgaagttagctcagttaaaattccagtggccaaagggttggtggatagagtgattccttcagatgcatctgagattgaaaggactcagaaaaataactattctgaatacaaggtaaagggggcacccctgtctgataaagattcatccaccaatgtgacctctggacatctctttccaacacttcctgaaaatcctgaacaaaaggaagagatcttctctgatatttcgaacagagcagccaaaaaatgccagtctgctaatgtatcaggcaatgatcatcaggtagcagtatcaggaaatcaacatgatttgattgatgacacttgtcaaagtgccaacaaaaaaattactgaaatttcaaagtcctgcgataaagtgatgaaggtcattgaaaacaagcctgtggagttgacttcacatccatgcggtcaggaggtcattccagaaaatattgtgatgatgaacattggaaaagagtctgtggatttgacttcagatccatgcagtcgggaggtcattccagaaagaaaggataaagctgggaccatctttgaaaatgttattgtggacttgacttcagatcaatgcagtcaggaggtcattgaaaaagaggaatcattagatctttccaccaaggttggaatacaaattccttcaggtccagctgagtttgaaaggactgaggaatgtaacaaatctgaagccaaggtcaatagggtgccatctgataaagattcatgcactgagacctctgggcatcccttcccaacacattctgaaaatcctgaagaaaatggagagaccacctcaaagaaagcaacaaaagaatgccggaatgctgatggatcagaattattatcaggcaaggatcaggtggtactatcacaaaaggaacctgatttaatgtatgctagttccccaagagacaacaagaaattgactgggatttcagagtctattcataatccccttacttttgaatgccaaaattatgatgtgatcatcaacgagaaggagtctgttgaggtgacttgtcaggaggtcattccacagggaaaggataccatcatcattgaaaacaagtctgttgaggtgactttagaaccatgcagccaggaggttattccagaaagaaaggatagaatcgtcattggagaagagtctgttgatttgactttagatccaagctgtcaagagttcattccagaaacaaagggggaatcattaaaggttttcaacagggtacacagacagcgtgctaatacaaatataagagtagttccttcagatgcatctgaccttgaaaggactgagaaaagaaattattcagaagttaaggtcagaaaggtatcaacttctgataaagttccacacaccaagcagacctcttgtcatctcaacccaatacgtcatgtacatgttgaagaagataaaacaaacatccctaagatttcaaacagaggaataaacaaacttaagactactgatggatcagtggctgcatcccaaaaggaacaagtttctatcgatgacagctgccaacaagccaaaaagaaatttactggaatttcaaattcttttgaagctccggttacttctggatcccaatattattcagctaaaatgtcaaagatcatggaaaaggagtttgtaaactccagttcagatccatgcagtcaggagattattccagaagttgatgccctatcatcaaagatctctaacaagttgcagagtcagagtaattttgcaagaaaaaatgacagcgctctttcagtggtaaaacctgaacccattgaagatgcaggtgcaacctttccaagtttcacaatctcctgtttggcaactgaccgtcaatcttttctggagttgccaaagagtttgccattacccttgaacaccatgaagggaaggtctaaactggataggaggatagtttatcttcaaggtcctgataagagattgtggccagtcctctacattcagaaatttttcttcagaactttggcaaatggttgggaggctttcagcatggcaaataatattgaacaaggagatcgatgtactattgaggtcacaaatcaaactgaaggcatatgtagtgtgcacatagttaagatgagagatgatatggaattctatgaagagtatgagcacagtcctctcattgacctgtcataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

997

Amino Acids

111.44

Weight (kDa)

5.61

Isoelectric Point (pI)

47.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002691)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g07280 FvH4_5g07280 FvH4_5g07280
malus_domestica	MD06G1157600.v1.1
prunus_persica	Prupe.5G155300_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0149271 RchiOBHm_Chr2g0149281 RchiOBHm_Chr7g0191351
rosa_laevigata	RLG00000004463 RLG00000020389
rosa_multiflora	Rmu_sc0004860.1_g000002
rosa_roxburghii	Rroxscaffold_157G00438290 Rroxscaffold_2G00098250 Rroxscaffold_3G00263910
rosa_rugosa	Rorug02G0410000 Rorug02G0410100 Rorug06G0510100
rosa_samantha	Rh2AG471000 Rh2BG483200 Rh2CG456900 Rh2DG492200 Rh7AG117500 Rh7BG119400 Rh7CG122500 Rh7DG120600
rosa_wichuraiana	Rw2G038310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2609
AasI	GACNNNNNNGTC	1 cut(s)	677
Acc36I	ACCTGC	1 cut(s)	2609
AccB1I	GGYRCC	2 cut(s)	934, 1531
AciI	CCGC	2 cut(s)	211, 1239
AclWI	GGATC	8 cut(s)	1304, 1666, 1689, 1988, 2311, 2409, 2422, 2474
AcoI	YGGCCR	2 cut(s)	840, 2780
AcvI	CACGTG	1 cut(s)	203
AfaI	GTAC	5 cut(s)	457, 1692, 2058, 2229, 2878
AfeI	AGCGCT	1 cut(s)	2581
AflII	CTTAAG	1 cut(s)	2288
AflIII	ACRYGT	2 cut(s)	627, 2230
AhdI	GACNNNNNGTC	2 cut(s)	628, 2202
AjnI	CCWGG	2 cut(s)	245, 1926
AleI	CACNNNNGTG	1 cut(s)	965
AluBI	AGCT	8 cut(s)	20, 822, 1352, 1478, 2001, 2349, 2399, 2432
AluI	AGCT	8 cut(s)	20, 822, 1352, 1478, 2001, 2349, 2399, 2432
Alw21I	GWGCWC	2 cut(s)	2922, 2970
Alw26I	GTCTC	5 cut(s)	383, 663, 1553, 1607, 1731
Alw44I	GTGCAC	1 cut(s)	2918
AlwI	GGATC	8 cut(s)	1304, 1666, 1689, 1988, 2311, 2409, 2422, 2474
AlwNI	CAGNNNCTG	1 cut(s)	2312
Aor51HI	AGCGCT	1 cut(s)	2581
AoxI	GGCC	3 cut(s)	249, 840, 2780
ApaLI	GTGCAC	1 cut(s)	2918
ApeKI	GCWGC	5 cut(s)	758, 1049, 1923, 2312, 2349
Asp700I	GAANNNNTTC	2 cut(s)	2137, 2804
AspLEI	GCGC	2 cut(s)	606, 2582
AspS9I	GGNCC	5 cut(s)	249, 491, 1356, 1472, 2762
AsuHPI	GGTGA	2 cut(s)	1852, 1918
AsuII	TTCGAA	2 cut(s)	15, 1040
AvaII	GGWCC	4 cut(s)	491, 1356, 1472, 2762
BaeGI	GKGCMC	2 cut(s)	937, 2922
BalI	TGGCCA	2 cut(s)	842, 2782
BamHI	GGATCC	1 cut(s)	2414
BanI	GGYRCC	2 cut(s)	934, 1531
BbrPI	CACGTG	1 cut(s)	203
BbsI	GAAGAC	1 cut(s)	307
Bbv12I	GWGCWC	2 cut(s)	2922, 2970
BbvI	GCAGC	5 cut(s)	745, 1061, 1935, 2299, 2336
BccI	CCATC	9 cut(s)	258, 422, 634, 734, 1367, 1543, 1649, 1886, 2294
BcgI	CGANNNNNNTGC	2 cut(s)	5, 39
BciT130I	CCWGG	2 cut(s)	247, 1928
BciVI	GTATCC	1 cut(s)	1867
BclI	TGATCA	2 cut(s)	1087, 1812
BcoDI	GTCTC	5 cut(s)	383, 663, 1553, 1607, 1731
BfaI	CTAG	4 cut(s)	231, 281, 699, 1725
BfmI	CTRYAG	1 cut(s)	759
BfoI	RGCGCY	1 cut(s)	2583
BfrI	CTTAAG	1 cut(s)	2288
BfuAI	ACCTGC	1 cut(s)	2609
BfuI	GTATCC	1 cut(s)	1867
BglII	AGATCT	3 cut(s)	1023, 1435, 2529
BisI	GCNGC	5 cut(s)	759, 1050, 1924, 2313, 2350
BlsI	GCNGC	5 cut(s)	760, 1051, 1925, 2314, 2351
Bme1390I	CCNGG	2 cut(s)	247, 1928
Bme18I	GGWCC	4 cut(s)	491, 1356, 1472, 2762
BmeRI	GACNNNNNGTC	2 cut(s)	628, 2202
BmgT120I	GGNCC	5 cut(s)	249, 491, 1356, 1472, 2762
BmiI	GGNNCC	7 cut(s)	76, 244, 936, 1357, 1533, 1707, 2416
BmrFI	CCNGG	2 cut(s)	247, 1928
BmrI	ACTGGG	1 cut(s)	1764
BmsI	GCATC	9 cut(s)	487, 865, 887, 1579, 2092, 2114, 2324, 2503, 2605
BmuI	ACTGGG	1 cut(s)	1764
BoxI	GACNNNNGTC	1 cut(s)	1137
BpiI	GAAGAC	1 cut(s)	307
BplI	GAGNNNNNCTC	4 cut(s)	1013, 1045, 1604, 1636
BpmI	CTGGAG	2 cut(s)	2455, 2699
Bpu14I	TTCGAA	2 cut(s)	15, 1040
Bsa29I	ATCGAT	2 cut(s)	2340, 2872
BsaAI	YACGTR	1 cut(s)	203
BsaI	GGTCTC	3 cut(s)	383, 1553, 1607
BsaJI	CCNNGG	3 cut(s)	246, 1446, 1518
BsaWI	WCCGGW	1 cut(s)	2401
Bse1I	ACTGG	7 cut(s)	836, 1063, 1759, 2380, 2472, 2739, 2783
Bse3DI	GCAATG	1 cut(s)	1090
BseBI	CCWGG	2 cut(s)	247, 1928
BseCI	ATCGAT	2 cut(s)	2340, 2872
BseDI	CCNNGG	3 cut(s)	246, 1446, 1518
BseGI	GGATG	6 cut(s)	269, 956, 1231, 1570, 2253, 2315
BseMI	GCAATG	1 cut(s)	1090
BseMII	CTCAG	8 cut(s)	50, 837, 873, 911, 1470, 1485, 1548, 2115
BseNI	ACTGG	7 cut(s)	836, 1063, 1759, 2380, 2472, 2739, 2783
BseSI	GKGCMC	2 cut(s)	937, 2922
BseXI	GCAGC	5 cut(s)	745, 1061, 1935, 2299, 2336
BseYI	CCCAGC	1 cut(s)	1352
BsgI	GTGCAG	1 cut(s)	45
BshFI	GGCC	3 cut(s)	251, 842, 2782
BshNI	GGYRCC	2 cut(s)	934, 1531
BshVI	ATCGAT	2 cut(s)	2340, 2872
BsiHKAI	GWGCWC	2 cut(s)	2922, 2970
BsiSI	CCGG	2 cut(s)	1645, 2402
BslFI	GGGAC	1 cut(s)	1369
BsmAI	GTCTC	5 cut(s)	383, 663, 1553, 1607, 1731
BsmFI	GGGAC	1 cut(s)	1369
BsmI	GAATGC	4 cut(s)	274, 1646, 1654, 1799
BsnI	GGCC	3 cut(s)	251, 842, 2782
Bso31I	GGTCTC	3 cut(s)	383, 1553, 1607
Bsp119I	TTCGAA	2 cut(s)	15, 1040
Bsp1286I	GDGCHC	3 cut(s)	937, 2922, 2970
Bsp1407I	TGTACA	1 cut(s)	2227
BspACI	CCGC	2 cut(s)	211, 1239
BspANI	GGCC	3 cut(s)	251, 842, 2782
BspCNI	CTCAG	8 cut(s)	49, 836, 874, 910, 1471, 1486, 1549, 2116
BspDI	ATCGAT	2 cut(s)	2340, 2872
BspHI	TCATGA	1 cut(s)	7
BspLI	GGNNCC	7 cut(s)	76, 244, 936, 1357, 1533, 1707, 2416
BspMAI	CTGCAG	1 cut(s)	763
BspMI	ACCTGC	1 cut(s)	2609
BspPI	GGATC	8 cut(s)	1304, 1666, 1689, 1988, 2311, 2409, 2422, 2474
BspT104I	TTCGAA	2 cut(s)	15, 1040
BspT107I	GGYRCC	2 cut(s)	934, 1531
BspTI	CTTAAG	1 cut(s)	2288
BspTNI	GGTCTC	3 cut(s)	383, 1553, 1607
BsrDI	GCAATG	1 cut(s)	1090
BsrGI	TGTACA	1 cut(s)	2227
BsrI	ACTGG	7 cut(s)	836, 1063, 1759, 2380, 2472, 2739, 2783
BssECI	CCNNGG	3 cut(s)	246, 1446, 1518
BssT1I	CCWWGG	2 cut(s)	1446, 1518
Bst2UI	CCWGG	2 cut(s)	247, 1928
Bst4CI	ACNGT	5 cut(s)	120, 346, 460, 2666, 2972
Bst6I	CTCTTC	3 cut(s)	1014, 1965, 2952
BstAFI	CTTAAG	1 cut(s)	2288
BstAPI	GCANNNNNTGC	1 cut(s)	617
BstAUI	TGTACA	1 cut(s)	2227
BstBAI	YACGTR	1 cut(s)	203
BstBI	TTCGAA	2 cut(s)	15, 1040
BstC8I	GCNNGC	2 cut(s)	602, 2070
BstDEI	CTNAG	9 cut(s)	36, 823, 882, 897, 1479, 1494, 1557, 2124, 2259
BstF5I	GGATG	6 cut(s)	269, 956, 1231, 1570, 2253, 2315
BstH2I	RGCGCY	1 cut(s)	2583
BstHHI	GCGC	2 cut(s)	606, 2582
BstMAI	GTCTC	5 cut(s)	383, 663, 1553, 1607, 1731
BstMWI	GCNNNNNNNGC	1 cut(s)	617
BstNI	CCWGG	2 cut(s)	247, 1928
BstNSI	RCATGY	2 cut(s)	631, 2234
BstPAI	GACNNNNGTC	1 cut(s)	1137
BstSCI	CCNGG	2 cut(s)	245, 1926
BstSFI	CTRYAG	1 cut(s)	759
BstSLI	GKGCMC	2 cut(s)	937, 2922
BstV1I	GCAGC	5 cut(s)	745, 1061, 1935, 2299, 2336
BstV2I	GAAGAC	1 cut(s)	307
BstX2I	RGATCY	7 cut(s)	1023, 1309, 1435, 1993, 2414, 2479, 2529
BstXI	CCANNNNNNTGG	2 cut(s)	446, 850
BstYI	RGATCY	7 cut(s)	1023, 1309, 1435, 1993, 2414, 2479, 2529
Bsu15I	ATCGAT	2 cut(s)	2340, 2872
BsuI	GTATCC	1 cut(s)	1867
BsuRI	GGCC	3 cut(s)	251, 842, 2782
BsuTUI	ATCGAT	2 cut(s)	2340, 2872
BtsCI	GGATG	6 cut(s)	269, 956, 1231, 1570, 2253, 2315
BtsI	GCAGTG	2 cut(s)	742, 768
BtsIMutI	CAGTG	9 cut(s)	440, 465, 742, 768, 797, 843, 1554, 2313, 2595
BveI	ACCTGC	1 cut(s)	2609
Cac8I	GCNNGC	2 cut(s)	602, 2070
CaiI	CAGNNNCTG	1 cut(s)	2312
CciI	TCATGA	1 cut(s)	7
CfoI	GCGC	2 cut(s)	606, 2582
Cfr13I	GGNCC	5 cut(s)	249, 491, 1356, 1472, 2762
ClaI	ATCGAT	2 cut(s)	2340, 2872
Csp6I	GTAC	5 cut(s)	456, 1691, 2057, 2228, 2877
CspCI	CAANNNNNGTGG	2 cut(s)	1432, 1467
CviQI	GTAC	5 cut(s)	456, 1691, 2057, 2228, 2877
DdeI	CTNAG	9 cut(s)	36, 823, 882, 897, 1479, 1494, 1557, 2124, 2259
DrdI	GACNNNNNNGTC	1 cut(s)	677
DriI	GACNNNNNGTC	2 cut(s)	628, 2202
DseDI	GACNNNNNNGTC	1 cut(s)	677
EaeI	YGGCCR	2 cut(s)	840, 2780
Eam1104I	CTCTTC	3 cut(s)	1014, 1965, 2952
Eam1105I	GACNNNNNGTC	2 cut(s)	628, 2202
EarI	CTCTTC	3 cut(s)	1014, 1965, 2952
Eco130I	CCWWGG	2 cut(s)	1446, 1518
Eco31I	GGTCTC	3 cut(s)	383, 1553, 1607
Eco47I	GGWCC	4 cut(s)	491, 1356, 1472, 2762
Eco47III	AGCGCT	1 cut(s)	2581
Eco72I	CACGTG	1 cut(s)	203
EcoO109I	RGGNCCY	1 cut(s)	2762
EcoRI	GAATTC	1 cut(s)	2948
EcoRII	CCWGG	2 cut(s)	245, 1926
EcoT14I	CCWWGG	2 cut(s)	1446, 1518
EcoT22I	ATGCAT	2 cut(s)	880, 2107
ErhI	CCWWGG	2 cut(s)	1446, 1518
FalI	AAGNNNNNCTT	2 cut(s)	366, 398
FaqI	GGGAC	1 cut(s)	1369
FauNDI	CATATG	1 cut(s)	2909
FbaI	TGATCA	2 cut(s)	1087, 1812
Fnu4HI	GCNGC	5 cut(s)	759, 1050, 1924, 2313, 2350
FokI	GGATG	6 cut(s)	276, 943, 1218, 1557, 2240, 2302
Fsp4HI	GCNGC	5 cut(s)	759, 1050, 1924, 2313, 2350
FspBI	CTAG	4 cut(s)	231, 281, 699, 1725
GlaI	GCGC	2 cut(s)	605, 2581
GluI	GCNGC	5 cut(s)	759, 1050, 1924, 2313, 2350
GsaI	CCCAGC	1 cut(s)	1356
GsuI	CTGGAG	2 cut(s)	2455, 2699
HaeII	RGCGCY	1 cut(s)	2583
HaeIII	GGCC	3 cut(s)	251, 842, 2782
HapII	CCGG	2 cut(s)	1645, 2402
HhaI	GCGC	2 cut(s)	606, 2582
Hin6I	GCGC	2 cut(s)	604, 2580
HinP1I	GCGC	2 cut(s)	604, 2580
HincII	GTYRAC	1 cut(s)	1224
HindII	GTYRAC	1 cut(s)	1224
HindIII	AAGCTT	1 cut(s)	18
HpaII	CCGG	2 cut(s)	1645, 2402
HphI	GGTGA	2 cut(s)	1852, 1918
Hpy166II	GTNNAC	8 cut(s)	206, 335, 421, 1224, 1381, 2059, 2467, 2920
Hpy8I	GTNNAC	8 cut(s)	206, 335, 421, 1224, 1381, 2059, 2467, 2920
HpyAV	CCTTC	9 cut(s)	879, 1189, 1476, 1585, 1819, 2106, 2713, 2718, 2897
HpyCH4III	ACNGT	5 cut(s)	120, 346, 460, 2666, 2972
HpyCH4IV	ACGT	3 cut(s)	202, 324, 2221
HpyF10VI	GCNNNNNNNGC	1 cut(s)	617
HpyF3I	CTNAG	9 cut(s)	36, 823, 882, 897, 1479, 1494, 1557, 2124, 2259
HpySE526I	ACGT	3 cut(s)	202, 324, 2221
HspAI	GCGC	2 cut(s)	604, 2580
Ksp22I	TGATCA	2 cut(s)	1087, 1812
LmnI	GCTCC	1 cut(s)	2404
Lsp1109I	GCAGC	5 cut(s)	745, 1061, 1935, 2299, 2336
LweI	GCATC	9 cut(s)	487, 865, 887, 1579, 2092, 2114, 2324, 2503, 2605
MaeI	CTAG	4 cut(s)	231, 281, 699, 1725
MaeII	ACGT	3 cut(s)	202, 324, 2221
MaeIII	GTNAC	6 cut(s)	967, 1502, 1840, 1906, 2404, 2887
MflI	RGATCY	7 cut(s)	1023, 1309, 1435, 1993, 2414, 2479, 2529
MhlI	GDGCHC	3 cut(s)	937, 2922, 2970
MlsI	TGGCCA	2 cut(s)	842, 2782
MluNI	TGGCCA	2 cut(s)	842, 2782
MlyI	GAGTC	7 cut(s)	687, 889, 1298, 1775, 1838, 1982, 2557
MmeI	TCCRAC	2 cut(s)	1013, 1432
Mox20I	TGGCCA	2 cut(s)	842, 2782
Mph1103I	ATGCAT	2 cut(s)	880, 2107
MroXI	GAANNNNTTC	2 cut(s)	2137, 2804
MscI	TGGCCA	2 cut(s)	842, 2782
MseI	TTAA	8 cut(s)	237, 348, 828, 1715, 2039, 2148, 2289, 2928
MslI	CAYNNNNRTG	5 cut(s)	426, 579, 965, 1234, 2229
Msp20I	TGGCCA	2 cut(s)	842, 2782
MspA1I	CMGCKG	2 cut(s)	1478, 2349
MspCI	CTTAAG	1 cut(s)	2288
MspI	CCGG	2 cut(s)	1645, 2402
MspR9I	CCNGG	2 cut(s)	247, 1928
Mva1269I	GAATGC	4 cut(s)	274, 1646, 1654, 1799
MvaI	CCWGG	2 cut(s)	247, 1928
MwoI	GCNNNNNNNGC	1 cut(s)	617
NdeI	CATATG	1 cut(s)	2909
NlaIV	GGNNCC	7 cut(s)	76, 244, 936, 1357, 1533, 1707, 2416
NmuCI	GTSAC	4 cut(s)	967, 1840, 1906, 2887
NsiI	ATGCAT	2 cut(s)	880, 2107
NspI	RCATGY	2 cut(s)	631, 2234
NspV	TTCGAA	2 cut(s)	15, 1040
OliI	CACNNNNGTG	1 cut(s)	965
PagI	TCATGA	1 cut(s)	7
PaqCI	CACCTGC	1 cut(s)	2609
PciI	ACATGT	2 cut(s)	627, 2230
PctI	GAATGC	4 cut(s)	274, 1646, 1654, 1799
PdmI	GAANNNNTTC	2 cut(s)	2137, 2804
PkrI	GCNGC	5 cut(s)	760, 1051, 1925, 2314, 2351
PleI	GAGTC	7 cut(s)	686, 889, 1297, 1774, 1837, 1981, 2556
PmaCI	CACGTG	1 cut(s)	203
PmlI	CACGTG	1 cut(s)	203
PpsI	GAGTC	7 cut(s)	686, 889, 1297, 1774, 1837, 1981, 2556
Ppu21I	YACGTR	1 cut(s)	203
PpuMI	RGGWCCY	1 cut(s)	2762
PscI	ACATGT	2 cut(s)	627, 2230
PshAI	GACNNNNGTC	1 cut(s)	1137
Psp5II	RGGWCCY	1 cut(s)	2762
Psp6I	CCWGG	2 cut(s)	245, 1926
PspCI	CACGTG	1 cut(s)	203
PspFI	CCCAGC	1 cut(s)	1352
PspGI	CCWGG	2 cut(s)	245, 1926
PspN4I	GGNNCC	7 cut(s)	76, 244, 936, 1357, 1533, 1707, 2416
PspPI	GGNCC	5 cut(s)	249, 491, 1356, 1472, 2762
PspPPI	RGGWCCY	1 cut(s)	2762
PstI	CTGCAG	1 cut(s)	763
PstNI	CAGNNNCTG	1 cut(s)	2312
PsuI	RGATCY	7 cut(s)	1023, 1309, 1435, 1993, 2414, 2479, 2529
PvuII	CAGCTG	2 cut(s)	1478, 2349
RsaI	GTAC	5 cut(s)	457, 1692, 2058, 2229, 2878
RsaNI	GTAC	5 cut(s)	456, 1691, 2057, 2228, 2877
RseI	CAYNNNNRTG	5 cut(s)	426, 579, 965, 1234, 2229
SaqAI	TTAA	8 cut(s)	237, 348, 828, 1715, 2039, 2148, 2289, 2928
SatI	GCNGC	5 cut(s)	759, 1050, 1924, 2313, 2350
Sau96I	GGNCC	5 cut(s)	249, 491, 1356, 1472, 2762
SchI	GAGTC	7 cut(s)	687, 889, 1298, 1775, 1838, 1982, 2557
ScrFI	CCNGG	2 cut(s)	247, 1928
SduI	GDGCHC	3 cut(s)	937, 2922, 2970
SfaNI	GCATC	9 cut(s)	487, 865, 887, 1579, 2092, 2114, 2324, 2503, 2605
SfcI	CTRYAG	1 cut(s)	759
SfuI	TTCGAA	2 cut(s)	15, 1040
SinI	GGWCC	4 cut(s)	491, 1356, 1472, 2762
SmiMI	CAYNNNNRTG	5 cut(s)	426, 579, 965, 1234, 2229
SmlI	CTYRAG	1 cut(s)	2288
SmoI	CTYRAG	1 cut(s)	2288
SsiI	CCGC	2 cut(s)	211, 1239
SspI	AATATT	3 cut(s)	1264, 2423, 2857
SspMI	CTAG	4 cut(s)	231, 281, 699, 1725
StyD4I	CCNGG	2 cut(s)	245, 1926
StyI	CCWWGG	2 cut(s)	1446, 1518
TaaI	ACNGT	5 cut(s)	120, 346, 460, 2666, 2972
TaiI	ACGT	3 cut(s)	205, 327, 2224
TaqI	TCGA	4 cut(s)	15, 1040, 2340, 2872
TatI	WGTACW	3 cut(s)	455, 2227, 2876
Tru1I	TTAA	8 cut(s)	237, 348, 828, 1715, 2039, 2148, 2289, 2928
Tru9I	TTAA	8 cut(s)	237, 348, 828, 1715, 2039, 2148, 2289, 2928
TscAI	CASTG	9 cut(s)	440, 465, 742, 768, 804, 843, 1561, 2313, 2595
TseFI	GTSAC	4 cut(s)	967, 1840, 1906, 2887
TseI	GCWGC	5 cut(s)	758, 1049, 1923, 2312, 2349
Tsp45I	GTSAC	4 cut(s)	967, 1840, 1906, 2887
TspGWI	ACGGA	2 cut(s)	460, 671
TspRI	CASTG	9 cut(s)	440, 465, 742, 768, 804, 843, 1561, 2313, 2595
Vha464I	CTTAAG	1 cut(s)	2288
VneI	GTGCAC	1 cut(s)	2918
VpaK11BI	GGWCC	4 cut(s)	491, 1356, 1472, 2762
XceI	RCATGY	2 cut(s)	631, 2234
XcmI	CCANNNNNNNNNTGG	1 cut(s)	850
XmnI	GAANNNNTTC	2 cut(s)	2137, 2804
XspI	CTAG	4 cut(s)	231, 281, 699, 1725
Zsp2I	ATGCAT	2 cut(s)	880, 2107

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.