B3 DNA binding domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g07280 FvH4_5g07280 FvH4_5g07280 |
| malus_domestica | MD06G1157600.v1.1 |
| prunus_persica | Prupe.5G155300_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 Prupe.5G157600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0149271 RchiOBHm_Chr2g0149281 RchiOBHm_Chr7g0191351 |
| rosa_laevigata | RLG00000004463 RLG00000020389 |
| rosa_multiflora | Rmu_sc0004860.1_g000002 |
| rosa_roxburghii | Rroxscaffold_157G00438290 Rroxscaffold_2G00098250 Rroxscaffold_3G00263910 |
| rosa_rugosa | Rorug02G0410000 Rorug02G0410100 Rorug06G0510100 |
| rosa_samantha | Rh2AG471000 Rh2BG483200 Rh2CG456900 Rh2DG492200 Rh7AG117500 Rh7BG119400 Rh7CG122500 Rh7DG120600 |
| rosa_wichuraiana | Rw2G038310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 40 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 70 |
| AgsI | TTSAA | 3 cut(s) | 40, 86, 178 |
| AluBI | AGCT | 1 cut(s) | 98 |
| AluI | AGCT | 1 cut(s) | 98 |
| Alw21I | GWGCWC | 2 cut(s) | 18, 70 |
| ApoI | RAATTY | 1 cut(s) | 40 |
| AsuII | TTCGAA | 1 cut(s) | 93 |
| BbsI | GAAGAC | 1 cut(s) | 36 |
| Bbv12I | GWGCWC | 2 cut(s) | 18, 70 |
| BccI | CCATC | 1 cut(s) | 73 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 83, 117 |
| BmiI | GGNNCC | 1 cut(s) | 154 |
| BpiI | GAAGAC | 1 cut(s) | 36 |
| Bpu14I | TTCGAA | 1 cut(s) | 93 |
| BsaWI | WCCGGW | 1 cut(s) | 70 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 70 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 70 |
| BseMII | CTCAG | 1 cut(s) | 128 |
| BsgI | GTGCAG | 1 cut(s) | 123 |
| BsiHKAI | GWGCWC | 2 cut(s) | 18, 70 |
| BsiSI | CCGG | 1 cut(s) | 71 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 70 |
| Bsp119I | TTCGAA | 1 cut(s) | 93 |
| Bsp1286I | GDGCHC | 2 cut(s) | 18, 70 |
| BspCNI | CTCAG | 1 cut(s) | 127 |
| BspLI | GGNNCC | 1 cut(s) | 154 |
| BspT104I | TTCGAA | 1 cut(s) | 93 |
| Bst4CI | ACNGT | 1 cut(s) | 198 |
| Bst6I | CTCTTC | 1 cut(s) | 69 |
| BstBI | TTCGAA | 1 cut(s) | 93 |
| BstDEI | CTNAG | 1 cut(s) | 114 |
| BstV2I | GAAGAC | 1 cut(s) | 36 |
| CviAII | CATG | 2 cut(s) | 19, 184 |
| CviJI | RGCY | 1 cut(s) | 98 |
| CviKI_1 | RGCY | 1 cut(s) | 98 |
| DdeI | CTNAG | 1 cut(s) | 114 |
| Eam1104I | CTCTTC | 1 cut(s) | 69 |
| EarI | CTCTTC | 1 cut(s) | 69 |
| EcoRI | GAATTC | 1 cut(s) | 40 |
| FaeI | CATG | 2 cut(s) | 22, 187 |
| FaiI | YATR | 6 cut(s) | 20, 135, 159, 185, 212, 217 |
| FatI | CATG | 2 cut(s) | 18, 183 |
| HapII | CCGG | 1 cut(s) | 71 |
| Hin1II | CATG | 2 cut(s) | 22, 187 |
| HindIII | AAGCTT | 1 cut(s) | 96 |
| HinfI | GANTC | 1 cut(s) | 130 |
| HpaII | CCGG | 1 cut(s) | 71 |
| Hpy188I | TCNGA | 2 cut(s) | 7, 117 |
| Hpy188III | TCNNGA | 1 cut(s) | 86 |
| HpyCH4III | ACNGT | 1 cut(s) | 198 |
| HpyCH4V | TGCA | 2 cut(s) | 104, 111 |
| HpyF3I | CTNAG | 1 cut(s) | 114 |
| Hsp92II | CATG | 2 cut(s) | 22, 187 |
| LpnPI | CCDG | 2 cut(s) | 32, 84 |
| MboII | GAAGA | 2 cut(s) | 41, 86 |
| MhlI | GDGCHC | 2 cut(s) | 18, 70 |
| MluCI | AATT | 1 cut(s) | 40 |
| MnlI | CCTC | 1 cut(s) | 178 |
| MspI | CCGG | 1 cut(s) | 71 |
| NlaIII | CATG | 2 cut(s) | 22, 187 |
| NlaIV | GGNNCC | 1 cut(s) | 154 |
| NspV | TTCGAA | 1 cut(s) | 93 |
| PfeI | GAWTC | 1 cut(s) | 130 |
| PspN4I | GGNNCC | 1 cut(s) | 154 |
| SduI | GDGCHC | 2 cut(s) | 18, 70 |
| SetI | ASST | 2 cut(s) | 100, 170 |
| SfuI | TTCGAA | 1 cut(s) | 93 |
| SgeI | CNNG | 7 cut(s) | 31, 59, 77, 83, 98, 111, 196 |
| Sse9I | AATT | 1 cut(s) | 40 |
| TaaI | ACNGT | 1 cut(s) | 198 |
| TaqI | TCGA | 2 cut(s) | 93, 162 |
| TasI | AATT | 1 cut(s) | 40 |
| TfiI | GAWTC | 1 cut(s) | 130 |
| TspDTI | ATGAA | 1 cut(s) | 122 |
| XapI | RAATTY | 1 cut(s) | 40 |