Rh7DG120600

B3 DNA binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0002691
Physical Location & Seq
Reverse (-)
10213852 .. 10220888
7037 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG120600.1

Sequence Viewer

Length: 2982 bp
ATGGTTCATGATTTCGAAGCTTGTGCAGATTGCACTCAGAAGTGTTTGCTGATTCATGGGAATAAGAAAAGTGGTTCCCATATTGAAACCTCTTTTTTCAAAATCATGTTTGGAAAACAGTTTTCTAAATTTATGGAATTGCCTCCAAAAGTTGCTCGTATTTTGTTATTGTCTGATCGGAGAACTTTTCTTGAAGATTCACGTGGACTGCGGTGGAAAGTTGCAATATCTAGTGTTAATGGTTCCTGGGCCTTTCAACAAGGATGGAATGCTTTTGCACTAGACCATGACCTACAAGTAGGAGATTTTCTGGTCTTCAATTACGTTGTGGGTTCACATTTTACTGTTAAGATATATGACAACTCTGGGTGTGAAGTGAATCTTTTTGAGACCATACATCAGAACAACAGAAATAGGGTTCACACAGATGGTCAGTGCCACACCATTGGTAAAAGTACAGTGAGCAAATCCGTTTCAGATACCTTTGCTGGTCCAGATGCAGAAATAAGTAAATGCTTGAATGAAGTGCATGGTATGAAGAAACCTCTAATTATCACAGAAAATGCTTCAGATCACGATGATGATGAAAGGTCAAAGTGCAAGCGCAAAGCAGAATTTGCTGACGACATGTCATGTATGATGGAAAGAGAATATGGACACCAACAAGGAGACAACAGAGTCCGTATTCTTGATTTGTCTAGTTTTGAATCATTCAAAAAGATAAAAACCTGTGGCAGTGATGGAAGCAATAAAGTTGCTGCAGTGAATGAAACACATTCTCATCATGCTGATTCATCACTGAAATTGAGAAATGAAGTTAGCTCAGTTAAAATTCCAGTGGCCAAAGAGTTGGTGGATAGAGTGATTCCTTCAGATGCATCTGAGATTGAAAGGACTCAGAAAAATAACTATTCTGAATACAAGGTAAAGGGGGCACCCCTGTCTGATAAAGATTCATCCACCAATGTGACCTCTGGACATCTCTTTCCAACACTTCCTGAAAATCCTGAACAAAAGGAAGAGATCTTCTCTGATATTTCGAACAGAGCAGCCAAAAAATGCCAGTCTGCTAATGTATCAGGCAATGATCATCAGGTAGCAGTATCAGGAAATGAACATGATTTGATTGATGACACTTGTCAAAGTGCCAACAAAAAAATTACTGAAATTTCAAAGTCCTGCGATAAAGTGATGAAGGTCATTGAAAACAAGCCTGTGGAGTTGACTTCACATCCATGCGGTCAGGAGGTCATTCCAGAAAATATTGTGATGATGAACATTGGAAAAGAGTCTGTGGATTTGACTTCAGATCCATGCAGTCGGGAGGTCATTCCAGAAAGAAAGGATAAAGCTGGGACCATCTTTGAAAATGTTATTGTGGACTTGACTTCAGATCAATGCAGTCAGGAGGTCATTGAAAAAGAGGAATCATTAGATCTTTCCACCAAGGTTGGAATACAAATTCCTTCAGGTCCAGCTGAGTTTGAAAGGACTGAGGAATGTAACAAATCTGAAGCCAAGGTCAATAGGGTGCCATCTGATAAAGATTCATGCACTGAGACCTCTGGGCATCCCTTCCCAACACATTCTGAAAATCCTGAAGAAAATGGAGAGACCACCTCAAAGAAAGCAACAAAAGAATGCCGGAATGCTGATGGATCAGGCAAGGATCAGGTGGTACTATCACAAAAGGAACCTGATTTAATGTATGCTAGTTCCCCAAGAGACAACAAGAAATTGACTGGGATTTCAGAGTCTATTCATAATCCCCTTACTTTTGAATGCCAAAATTATGATGTGATCATCAACGAGAAGGAGTCTGTTGAGGTGACTTGTCAGGAGGTCATTCCACAGGGAAAGGATACCATCATCATTGAAAACAAGTCTGTTGAGGTGACTTTAGAACCATGCAGCCAGGAGGTTATTCCAGAAAGAAAGGATAGAATCGTCATTGGAGAAGAGTCTGTTGATTTGACTTTAGATCCAAGCTGTCAAGAGTTCATTCCAGAAACAAAGGGGGAATCATTAAAGGTTTTCAACAGGGTACACAGACAGCGTGCTAATACAAATATAAGAGTAGTTCCTTCAGATGCATCTGACCTTGAAAGGACTGAGAAAAGAAATTATTCAGAAGTTAAGGTCAGAAAGGTATCAACTTCTGATAAAGTTCCACACACCAAGCAGACCTCTTGTCATCTCAACCCAATACGTCATGTACATGTTGAAGAAGATAAAACAAACATCCCTAAGATTTCAAACAGAGGAATAAACAAACTTAAGACTACTGATGGATCAGTGGCTGCATCCCAAAAGGAACAAGTTTCTATCGATGACAGCTGCCAACAAGCCAAAAAGAAATTTACTGGAATTTCAAATTCTTTTGAAGCTCCGGTTACTTCTGGATCCCAATATTATTCAGCTAAAATGTCAAAGATCATGGAAAAGGAGTTTGTAAACTCCAGTTCAGATCCATGCAGTCAGGAGATTATTCCAGAAGTTGATGCCCTATCATCAAAGATCTCTAACAAGTTGCAGAGTCAGAGTAATTTTGCAAGAAAAAATGACAGCGCTCTTTCAGTGGTAAAACCTGAACCCATTGAAGATGCAGGTGCAACCTTTCCAAGTTTCACAATCTCCTGTTTGGCAACTGACCGTCAATCTTTTCTGGAGTTGCCAAAGAGTTTGCCATTACCCTTGAACACCATGAAGGGAAGGTCTAAACTGGATAGGAGGATAGTTTATCTTCAAGGTCCTGATAAGAGATTGTGGCCAGTCCTCTACATTCAGAAATTTTTCTTCAGAACTTTGGCAAATGGTTGGGAGGCTTTCAGCATGGCAAATAATATTGAACAAGGAGATCGATGTACTATTGAGGTCACAAATCAAACTGAAGGCATATGTAGTGTGCACATAGTTAAGATGAGAGATGATATGGAATTCTATGAAGAGTATGAGCACAGTCCTCTCATTGACCTGTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B3

Protein Analysis

993

Amino Acids

111.07

Weight (kDa)

5.58

Isoelectric Point (pI)

48.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B3 PF02362 32 - 121 7.6e-11 B3 DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2597
AasI GACNNNNNNGTC 1 cut(s) 677
Acc36I ACCTGC 1 cut(s) 2597
AccB1I GGYRCC 2 cut(s) 934, 1531
AciI CCGC 2 cut(s) 211, 1239
AclWI GGATC 8 cut(s) 1304, 1666, 1677, 1976, 2299, 2397, 2410, 2462
AcoI YGGCCR 2 cut(s) 840, 2768
AcvI CACGTG 1 cut(s) 203
AfaI GTAC 5 cut(s) 457, 1680, 2046, 2217, 2866
AfeI AGCGCT 1 cut(s) 2569
AflII CTTAAG 1 cut(s) 2276
AflIII ACRYGT 2 cut(s) 627, 2218
AhdI GACNNNNNGTC 2 cut(s) 628, 2190
AjnI CCWGG 2 cut(s) 245, 1914
AleI CACNNNNGTG 1 cut(s) 965
AluBI AGCT 8 cut(s) 20, 822, 1352, 1478, 1989, 2337, 2387, 2420
AluI AGCT 8 cut(s) 20, 822, 1352, 1478, 1989, 2337, 2387, 2420
Alw21I GWGCWC 2 cut(s) 2910, 2958
Alw26I GTCTC 5 cut(s) 383, 663, 1553, 1607, 1719
Alw44I GTGCAC 1 cut(s) 2906
AlwI GGATC 8 cut(s) 1304, 1666, 1677, 1976, 2299, 2397, 2410, 2462
AlwNI CAGNNNCTG 1 cut(s) 2300
Aor51HI AGCGCT 1 cut(s) 2569
AoxI GGCC 3 cut(s) 249, 840, 2768
ApaLI GTGCAC 1 cut(s) 2906
ApeKI GCWGC 5 cut(s) 758, 1049, 1911, 2300, 2337
Asp700I GAANNNNTTC 2 cut(s) 2125, 2792
AspLEI GCGC 2 cut(s) 606, 2570
AspS9I GGNCC 5 cut(s) 249, 491, 1356, 1472, 2750
AsuHPI GGTGA 2 cut(s) 1840, 1906
AsuII TTCGAA 2 cut(s) 15, 1040
AvaII GGWCC 4 cut(s) 491, 1356, 1472, 2750
BaeGI GKGCMC 2 cut(s) 937, 2910
BalI TGGCCA 2 cut(s) 842, 2770
BamHI GGATCC 1 cut(s) 2402
BanI GGYRCC 2 cut(s) 934, 1531
BbrPI CACGTG 1 cut(s) 203
BbsI GAAGAC 1 cut(s) 307
Bbv12I GWGCWC 2 cut(s) 2910, 2958
BbvI GCAGC 5 cut(s) 745, 1061, 1923, 2287, 2324
BccI CCATC 9 cut(s) 258, 422, 634, 734, 1367, 1543, 1649, 1874, 2282
BcgI CGANNNNNNTGC 2 cut(s) 5, 39
BciT130I CCWGG 2 cut(s) 247, 1916
BciVI GTATCC 1 cut(s) 1855
BclI TGATCA 2 cut(s) 1087, 1800
BcoDI GTCTC 5 cut(s) 383, 663, 1553, 1607, 1719
BfaI CTAG 4 cut(s) 231, 281, 699, 1713
BfmI CTRYAG 1 cut(s) 759
BfoI RGCGCY 1 cut(s) 2571
BfrI CTTAAG 1 cut(s) 2276
BfuAI ACCTGC 1 cut(s) 2597
BfuI GTATCC 1 cut(s) 1855
BglII AGATCT 3 cut(s) 1023, 1435, 2517
BisI GCNGC 5 cut(s) 759, 1050, 1912, 2301, 2338
BlsI GCNGC 5 cut(s) 760, 1051, 1913, 2302, 2339
Bme1390I CCNGG 2 cut(s) 247, 1916
Bme18I GGWCC 4 cut(s) 491, 1356, 1472, 2750
BmeRI GACNNNNNGTC 2 cut(s) 628, 2190
BmgT120I GGNCC 5 cut(s) 249, 491, 1356, 1472, 2750
BmiI GGNNCC 7 cut(s) 76, 244, 936, 1357, 1533, 1695, 2404
BmrFI CCNGG 2 cut(s) 247, 1916
BmrI ACTGGG 1 cut(s) 1752
BmsI GCATC 9 cut(s) 487, 865, 887, 1579, 2080, 2102, 2312, 2491, 2593
BmuI ACTGGG 1 cut(s) 1752
BoxI GACNNNNGTC 1 cut(s) 1137
BpiI GAAGAC 1 cut(s) 307
BplI GAGNNNNNCTC 4 cut(s) 1013, 1045, 1604, 1636
BpmI CTGGAG 2 cut(s) 2443, 2687
Bpu14I TTCGAA 2 cut(s) 15, 1040
Bsa29I ATCGAT 2 cut(s) 2328, 2860
BsaAI YACGTR 1 cut(s) 203
BsaI GGTCTC 3 cut(s) 383, 1553, 1607
BsaJI CCNNGG 3 cut(s) 246, 1446, 1518
BsaWI WCCGGW 1 cut(s) 2389
Bse1I ACTGG 7 cut(s) 836, 1063, 1747, 2368, 2460, 2727, 2771
Bse3DI GCAATG 1 cut(s) 1090
BseBI CCWGG 2 cut(s) 247, 1916
BseCI ATCGAT 2 cut(s) 2328, 2860
BseDI CCNNGG 3 cut(s) 246, 1446, 1518
BseGI GGATG 6 cut(s) 269, 956, 1231, 1570, 2241, 2303
BseMI GCAATG 1 cut(s) 1090
BseMII CTCAG 8 cut(s) 50, 837, 873, 911, 1470, 1485, 1548, 2103
BseNI ACTGG 7 cut(s) 836, 1063, 1747, 2368, 2460, 2727, 2771
BseSI GKGCMC 2 cut(s) 937, 2910
BseXI GCAGC 5 cut(s) 745, 1061, 1923, 2287, 2324
BseYI CCCAGC 1 cut(s) 1352
BsgI GTGCAG 1 cut(s) 45
BshFI GGCC 3 cut(s) 251, 842, 2770
BshNI GGYRCC 2 cut(s) 934, 1531
BshVI ATCGAT 2 cut(s) 2328, 2860
BsiHKAI GWGCWC 2 cut(s) 2910, 2958
BsiSI CCGG 2 cut(s) 1645, 2390
BslFI GGGAC 1 cut(s) 1369
BsmAI GTCTC 5 cut(s) 383, 663, 1553, 1607, 1719
BsmFI GGGAC 1 cut(s) 1369
BsmI GAATGC 4 cut(s) 274, 1646, 1654, 1787
BsnI GGCC 3 cut(s) 251, 842, 2770
Bso31I GGTCTC 3 cut(s) 383, 1553, 1607
Bsp119I TTCGAA 2 cut(s) 15, 1040
Bsp1286I GDGCHC 3 cut(s) 937, 2910, 2958
Bsp1407I TGTACA 1 cut(s) 2215
BspACI CCGC 2 cut(s) 211, 1239
BspANI GGCC 3 cut(s) 251, 842, 2770
BspCNI CTCAG 8 cut(s) 49, 836, 874, 910, 1471, 1486, 1549, 2104
BspDI ATCGAT 2 cut(s) 2328, 2860
BspHI TCATGA 1 cut(s) 7
BspLI GGNNCC 7 cut(s) 76, 244, 936, 1357, 1533, 1695, 2404
BspMAI CTGCAG 1 cut(s) 763
BspMI ACCTGC 1 cut(s) 2597
BspPI GGATC 8 cut(s) 1304, 1666, 1677, 1976, 2299, 2397, 2410, 2462
BspT104I TTCGAA 2 cut(s) 15, 1040
BspT107I GGYRCC 2 cut(s) 934, 1531
BspTI CTTAAG 1 cut(s) 2276
BspTNI GGTCTC 3 cut(s) 383, 1553, 1607
BsrDI GCAATG 1 cut(s) 1090
BsrGI TGTACA 1 cut(s) 2215
BsrI ACTGG 7 cut(s) 836, 1063, 1747, 2368, 2460, 2727, 2771
BssECI CCNNGG 3 cut(s) 246, 1446, 1518
BssT1I CCWWGG 2 cut(s) 1446, 1518
Bst2UI CCWGG 2 cut(s) 247, 1916
Bst4CI ACNGT 5 cut(s) 120, 346, 460, 2654, 2960
Bst6I CTCTTC 3 cut(s) 1014, 1953, 2940
BstAFI CTTAAG 1 cut(s) 2276
BstAPI GCANNNNNTGC 1 cut(s) 617
BstAUI TGTACA 1 cut(s) 2215
BstBAI YACGTR 1 cut(s) 203
BstBI TTCGAA 2 cut(s) 15, 1040
BstC8I GCNNGC 2 cut(s) 602, 2058
BstDEI CTNAG 9 cut(s) 36, 823, 882, 897, 1479, 1494, 1557, 2112, 2247
BstF5I GGATG 6 cut(s) 269, 956, 1231, 1570, 2241, 2303
BstH2I RGCGCY 1 cut(s) 2571
BstHHI GCGC 2 cut(s) 606, 2570
BstMAI GTCTC 5 cut(s) 383, 663, 1553, 1607, 1719
BstMWI GCNNNNNNNGC 1 cut(s) 617
BstNI CCWGG 2 cut(s) 247, 1916
BstNSI RCATGY 2 cut(s) 631, 2222
BstPAI GACNNNNGTC 1 cut(s) 1137
BstSCI CCNGG 2 cut(s) 245, 1914
BstSFI CTRYAG 1 cut(s) 759
BstSLI GKGCMC 2 cut(s) 937, 2910
BstV1I GCAGC 5 cut(s) 745, 1061, 1923, 2287, 2324
BstV2I GAAGAC 1 cut(s) 307
BstX2I RGATCY 7 cut(s) 1023, 1309, 1435, 1981, 2402, 2467, 2517
BstXI CCANNNNNNTGG 2 cut(s) 446, 850
BstYI RGATCY 7 cut(s) 1023, 1309, 1435, 1981, 2402, 2467, 2517
Bsu15I ATCGAT 2 cut(s) 2328, 2860
BsuI GTATCC 1 cut(s) 1855
BsuRI GGCC 3 cut(s) 251, 842, 2770
BsuTUI ATCGAT 2 cut(s) 2328, 2860
BtsCI GGATG 6 cut(s) 269, 956, 1231, 1570, 2241, 2303
BtsI GCAGTG 2 cut(s) 742, 768
BtsIMutI CAGTG 9 cut(s) 440, 465, 742, 768, 797, 843, 1554, 2301, 2583
BveI ACCTGC 1 cut(s) 2597
Cac8I GCNNGC 2 cut(s) 602, 2058
CaiI CAGNNNCTG 1 cut(s) 2300
CciI TCATGA 1 cut(s) 7
CfoI GCGC 2 cut(s) 606, 2570
Cfr13I GGNCC 5 cut(s) 249, 491, 1356, 1472, 2750
ClaI ATCGAT 2 cut(s) 2328, 2860
Csp6I GTAC 5 cut(s) 456, 1679, 2045, 2216, 2865
CspCI CAANNNNNGTGG 2 cut(s) 1432, 1467
CviQI GTAC 5 cut(s) 456, 1679, 2045, 2216, 2865
DdeI CTNAG 9 cut(s) 36, 823, 882, 897, 1479, 1494, 1557, 2112, 2247
DrdI GACNNNNNNGTC 1 cut(s) 677
DriI GACNNNNNGTC 2 cut(s) 628, 2190
DseDI GACNNNNNNGTC 1 cut(s) 677
EaeI YGGCCR 2 cut(s) 840, 2768
Eam1104I CTCTTC 3 cut(s) 1014, 1953, 2940
Eam1105I GACNNNNNGTC 2 cut(s) 628, 2190
EarI CTCTTC 3 cut(s) 1014, 1953, 2940
Eco130I CCWWGG 2 cut(s) 1446, 1518
Eco31I GGTCTC 3 cut(s) 383, 1553, 1607
Eco47I GGWCC 4 cut(s) 491, 1356, 1472, 2750
Eco47III AGCGCT 1 cut(s) 2569
Eco72I CACGTG 1 cut(s) 203
EcoO109I RGGNCCY 1 cut(s) 2750
EcoRI GAATTC 1 cut(s) 2936
EcoRII CCWGG 2 cut(s) 245, 1914
EcoT14I CCWWGG 2 cut(s) 1446, 1518
EcoT22I ATGCAT 2 cut(s) 880, 2095
ErhI CCWWGG 2 cut(s) 1446, 1518
FalI AAGNNNNNCTT 2 cut(s) 366, 398
FaqI GGGAC 1 cut(s) 1369
FauNDI CATATG 1 cut(s) 2897
FbaI TGATCA 2 cut(s) 1087, 1800
Fnu4HI GCNGC 5 cut(s) 759, 1050, 1912, 2301, 2338
FokI GGATG 6 cut(s) 276, 943, 1218, 1557, 2228, 2290
Fsp4HI GCNGC 5 cut(s) 759, 1050, 1912, 2301, 2338
FspBI CTAG 4 cut(s) 231, 281, 699, 1713
GlaI GCGC 2 cut(s) 605, 2569
GluI GCNGC 5 cut(s) 759, 1050, 1912, 2301, 2338
GsaI CCCAGC 1 cut(s) 1356
GsuI CTGGAG 2 cut(s) 2443, 2687
HaeII RGCGCY 1 cut(s) 2571
HaeIII GGCC 3 cut(s) 251, 842, 2770
HapII CCGG 2 cut(s) 1645, 2390
HhaI GCGC 2 cut(s) 606, 2570
Hin6I GCGC 2 cut(s) 604, 2568
HinP1I GCGC 2 cut(s) 604, 2568
HincII GTYRAC 1 cut(s) 1224
HindII GTYRAC 1 cut(s) 1224
HindIII AAGCTT 1 cut(s) 18
HpaII CCGG 2 cut(s) 1645, 2390
HphI GGTGA 2 cut(s) 1840, 1906
Hpy166II GTNNAC 8 cut(s) 206, 335, 421, 1224, 1381, 2047, 2455, 2908
Hpy8I GTNNAC 8 cut(s) 206, 335, 421, 1224, 1381, 2047, 2455, 2908
HpyAV CCTTC 9 cut(s) 879, 1189, 1476, 1585, 1807, 2094, 2701, 2706, 2885
HpyCH4III ACNGT 5 cut(s) 120, 346, 460, 2654, 2960
HpyCH4IV ACGT 3 cut(s) 202, 324, 2209
HpyF10VI GCNNNNNNNGC 1 cut(s) 617
HpyF3I CTNAG 9 cut(s) 36, 823, 882, 897, 1479, 1494, 1557, 2112, 2247
HpySE526I ACGT 3 cut(s) 202, 324, 2209
HspAI GCGC 2 cut(s) 604, 2568
Ksp22I TGATCA 2 cut(s) 1087, 1800
LmnI GCTCC 1 cut(s) 2392
Lsp1109I GCAGC 5 cut(s) 745, 1061, 1923, 2287, 2324
LweI GCATC 9 cut(s) 487, 865, 887, 1579, 2080, 2102, 2312, 2491, 2593
MaeI CTAG 4 cut(s) 231, 281, 699, 1713
MaeII ACGT 3 cut(s) 202, 324, 2209
MaeIII GTNAC 6 cut(s) 967, 1502, 1828, 1894, 2392, 2875
MflI RGATCY 7 cut(s) 1023, 1309, 1435, 1981, 2402, 2467, 2517
MhlI GDGCHC 3 cut(s) 937, 2910, 2958
MlsI TGGCCA 2 cut(s) 842, 2770
MluNI TGGCCA 2 cut(s) 842, 2770
MlyI GAGTC 7 cut(s) 687, 889, 1298, 1763, 1826, 1970, 2545
MmeI TCCRAC 2 cut(s) 1013, 1432
Mox20I TGGCCA 2 cut(s) 842, 2770
Mph1103I ATGCAT 2 cut(s) 880, 2095
MroXI GAANNNNTTC 2 cut(s) 2125, 2792
MscI TGGCCA 2 cut(s) 842, 2770
MseI TTAA 8 cut(s) 237, 348, 828, 1703, 2027, 2136, 2277, 2916
MslI CAYNNNNRTG 5 cut(s) 426, 579, 965, 1234, 2217
Msp20I TGGCCA 2 cut(s) 842, 2770
MspA1I CMGCKG 2 cut(s) 1478, 2337
MspCI CTTAAG 1 cut(s) 2276
MspI CCGG 2 cut(s) 1645, 2390
MspR9I CCNGG 2 cut(s) 247, 1916
Mva1269I GAATGC 4 cut(s) 274, 1646, 1654, 1787
MvaI CCWGG 2 cut(s) 247, 1916
MwoI GCNNNNNNNGC 1 cut(s) 617
NdeI CATATG 1 cut(s) 2897
NlaIV GGNNCC 7 cut(s) 76, 244, 936, 1357, 1533, 1695, 2404
NmuCI GTSAC 4 cut(s) 967, 1828, 1894, 2875
NsiI ATGCAT 2 cut(s) 880, 2095
NspI RCATGY 2 cut(s) 631, 2222
NspV TTCGAA 2 cut(s) 15, 1040
OliI CACNNNNGTG 1 cut(s) 965
PagI TCATGA 1 cut(s) 7
PaqCI CACCTGC 1 cut(s) 2597
PciI ACATGT 2 cut(s) 627, 2218
PctI GAATGC 4 cut(s) 274, 1646, 1654, 1787
PdmI GAANNNNTTC 2 cut(s) 2125, 2792
PkrI GCNGC 5 cut(s) 760, 1051, 1913, 2302, 2339
PleI GAGTC 7 cut(s) 686, 889, 1297, 1762, 1825, 1969, 2544
PmaCI CACGTG 1 cut(s) 203
PmlI CACGTG 1 cut(s) 203
PpsI GAGTC 7 cut(s) 686, 889, 1297, 1762, 1825, 1969, 2544
Ppu21I YACGTR 1 cut(s) 203
PpuMI RGGWCCY 1 cut(s) 2750
PscI ACATGT 2 cut(s) 627, 2218
PshAI GACNNNNGTC 1 cut(s) 1137
Psp5II RGGWCCY 1 cut(s) 2750
Psp6I CCWGG 2 cut(s) 245, 1914
PspCI CACGTG 1 cut(s) 203
PspFI CCCAGC 1 cut(s) 1352
PspGI CCWGG 2 cut(s) 245, 1914
PspN4I GGNNCC 7 cut(s) 76, 244, 936, 1357, 1533, 1695, 2404
PspPI GGNCC 5 cut(s) 249, 491, 1356, 1472, 2750
PspPPI RGGWCCY 1 cut(s) 2750
PstI CTGCAG 1 cut(s) 763
PstNI CAGNNNCTG 1 cut(s) 2300
PsuI RGATCY 7 cut(s) 1023, 1309, 1435, 1981, 2402, 2467, 2517
PvuII CAGCTG 2 cut(s) 1478, 2337
RsaI GTAC 5 cut(s) 457, 1680, 2046, 2217, 2866
RsaNI GTAC 5 cut(s) 456, 1679, 2045, 2216, 2865
RseI CAYNNNNRTG 5 cut(s) 426, 579, 965, 1234, 2217
SaqAI TTAA 8 cut(s) 237, 348, 828, 1703, 2027, 2136, 2277, 2916
SatI GCNGC 5 cut(s) 759, 1050, 1912, 2301, 2338
Sau96I GGNCC 5 cut(s) 249, 491, 1356, 1472, 2750
SchI GAGTC 7 cut(s) 687, 889, 1298, 1763, 1826, 1970, 2545
ScrFI CCNGG 2 cut(s) 247, 1916
SduI GDGCHC 3 cut(s) 937, 2910, 2958
SfaNI GCATC 9 cut(s) 487, 865, 887, 1579, 2080, 2102, 2312, 2491, 2593
SfcI CTRYAG 1 cut(s) 759
SfuI TTCGAA 2 cut(s) 15, 1040
SinI GGWCC 4 cut(s) 491, 1356, 1472, 2750
SmiMI CAYNNNNRTG 5 cut(s) 426, 579, 965, 1234, 2217
SmlI CTYRAG 1 cut(s) 2276
SmoI CTYRAG 1 cut(s) 2276
SsiI CCGC 2 cut(s) 211, 1239
SspI AATATT 3 cut(s) 1264, 2411, 2845
SspMI CTAG 4 cut(s) 231, 281, 699, 1713
StyD4I CCNGG 2 cut(s) 245, 1914
StyI CCWWGG 2 cut(s) 1446, 1518
TaaI ACNGT 5 cut(s) 120, 346, 460, 2654, 2960
TaiI ACGT 3 cut(s) 205, 327, 2212
TaqI TCGA 4 cut(s) 15, 1040, 2328, 2860
TatI WGTACW 3 cut(s) 455, 2215, 2864
Tru1I TTAA 8 cut(s) 237, 348, 828, 1703, 2027, 2136, 2277, 2916
Tru9I TTAA 8 cut(s) 237, 348, 828, 1703, 2027, 2136, 2277, 2916
TscAI CASTG 9 cut(s) 440, 465, 742, 768, 804, 843, 1561, 2301, 2583
TseFI GTSAC 4 cut(s) 967, 1828, 1894, 2875
TseI GCWGC 5 cut(s) 758, 1049, 1911, 2300, 2337
Tsp45I GTSAC 4 cut(s) 967, 1828, 1894, 2875
TspGWI ACGGA 2 cut(s) 460, 671
TspRI CASTG 9 cut(s) 440, 465, 742, 768, 804, 843, 1561, 2301, 2583
Vha464I CTTAAG 1 cut(s) 2276
VneI GTGCAC 1 cut(s) 2906
VpaK11BI GGWCC 4 cut(s) 491, 1356, 1472, 2750
XceI RCATGY 2 cut(s) 631, 2222
XcmI CCANNNNNNNNNTGG 1 cut(s) 850
XmnI GAANNNNTTC 2 cut(s) 2125, 2792
XspI CTAG 4 cut(s) 231, 281, 699, 1713
Zsp2I ATGCAT 2 cut(s) 880, 2095
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.