Rh7AG117500

B3 DNA binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0002691
Physical Location & Seq
Reverse (-)
9173796 .. 9180922
7127 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG117500.1

Sequence Viewer

Length: 3147 bp
ATGGAAAGTCATTGTCTCAATCATATTAGCTTGGTCCTTTCAGAAGACAAACTGATTATATCATCAACTAGTCATGGTTGTGTTTATCTTACTTTATCTTCCACCATTTTGAGGGTAGCAATAATCAACCGAGCACCGGAAGAGATGGTTCATGATTTCGAAGCTTGTGCAGATTGCACTCAGAAGTGTTTGCTGATTCATGGGAATAAGAAAAGTGGTTCCCATATCGAAACCTCTTTTTTCAAAATCATGTTTGGAAAACAGTTTTCTAAATTTATGGAATTGCCTCCAAAAGTTGCTCGTATTTTGTTATTGTCTGATCGGAGAACTTTTCTTGAAGATTCACGTGAACTGCGGTGGAAAGTTGCAATATCTAGTGTTAATGGTTCCTGGGCCTTTCAACAAGGATGGAATGCTTTTGCACTAGACCATGACCTACAAGTAGGAGATTTTCTGGTCTTCAATTACGTTGTGGGTTCACATTTTACTGTTAAGATATATGACAACTCTGGGTGTGAAGTGAATCTTTTTGAGACCATACATCAGAACAACAGAAATAGGGTTCACACAGATGGTCAGTGCCACACCATTGGTAAAAGTACAGTGAGCAAATCCGTTTCAGATACCTTTGCTGGTCCAGATGAAGAAATAAGTAAATGCTTGAATGAAGTGCATGGTATGAAGAAACCTCTAATTATCACAGAAAATGCTTCAGATCACGATGATGATTATGAAAGGTCAAAGTGCAAGCGCAAAGCAGAATTTGCTGACGACATGTCATGTATGATGGAAAGAGAATATGGACACCAACAAGGAGAGAACAGAGCCCGTATTCTTGATTTGTCTAGTTTTGAATCATTCAAAAAGATAAAAACCTGTGGCAGTGATGGAAGCAATAAAGTTGCTGCAGTGAATGAAACACATTCTCATCATGCTGATTCATCACTGAAATTGAGAAATGAAGTTAGCTCAGTTAAAATTCCAGTGGCTAAAGAGTTGGTGGATAGAGTAATTCCTTCAGATGCATCTGAGATTGAAAGGACTCAGAAAAATAACTATTCTGAATACAAGGTAAAGGGGGCACCCCTGTCTGATAAAGATTCATCCACCAATGTGACCTCTGGACATCTCTTTCCAACACTTCCTGAAAATCCTGAACAAAAGGAAGAGATCTTCTCTGGTATTTCGAACAGAGCAGCCAAAAAATGCCAGTCTGCTAATGTATCAGGCAATGATCATCAGGTAGCAGTATCAGGAAATGAACATGATTTGATTGATGACACTTGTCAAAGTGCCAACAAAAAAATTACTGAAATTTCAAAGTCCTGCGATAAAGTGATGAAGGTCATTGAAAACAAGCCTGTGGAGTTGACTTCACATCCATGCGGTCAGGAGGTCATTCCAGAAAGTAATGATATTGTGATGATGAACATTGGAAAAGAGTCTGTGGATTTGACTTCAGATCCATGCAGTCGGGAGGTCATTCCAGAAAGAAAGGATAAAGCTGGGACCATCATTGAAAATGTTATTGTGGACTTGACTTCAGATCAATGCAGTCAGGAGGTCATTGAAAAAGAGGAATCATTAGATCTTTCCACCAAGGTTGGAATACAAATTCCTTCAGGTCCAGCTGAGTTTGAAAGGACTGAGGAATGTAACAAATCTGAAGCCAAGGTCAATATGGTGCCGTCTGATAAAGATTCATGCACTGAGACCTCTGGGCATCCCTTCCCAACACATTCTGAAAATCCTGAAGAAAATGGAGAGACCACCTCAAAGAAAGCAACAAAAGAATGCCGGAATGCTGATGGATCAGAATTATTATCAGGCAAGGATCAGGTGGTACTATCACAAAAGGAACCTGATTTAATGTATGCTAGTTCCCCAAGAGACAACAAGAAATTGACTGGGATTTCAGAGTCTATTCCTAATCCCCTTACTTTTGAATGCCAAAATTATGATGTGATCATCAACAAGAAGGAGTATGTTGAGGTGACTTGTCAGGAGGCCATTCCACAGAGAAAGGATACCATCATCATTGAAAACAAGTCTGTTGAGGTGACTTTAGAACCATGCAGCCAGGAGGTTATTCCAGAAAGAAAGGATACAATCGTCATTGGAGAAGAGTCTGTTAATTTGACTTTAGATCCAAGCTGTCAAGAGTTCATTCCAGAAACAAAGGGGGAATCATTAAAGGTTTTCAACAGGGTACACAGACAGCGTGCTAATACAAATATAAGAGCAGTTCCTTCAGATGCATCTGACCTTGAAAGGACTGAGAAAAGAAATTATTCTGAAGTTAAGGTCAGAAAGGTATCAACTTCTGATAAAGTTCCACACACCAAGCAGACCTCTTGTCATCTCAACCCAATACGTCATGTACATGTTGAAGAAGATAAAACAAACATCCCTAAGATTTCAAACAGAGGAATAAACAAACTTAAGACTACTGATGGATCAGTGGCTGCATACCAAAAGGAACAAGTTTCTATCGATGACAGCTGCCAACAAGCCAAAAAGAAATTTACTGGAATTTCAAATTCTTTTGAAGCTCCGGTTACGTCTGGATCCCAATATTATTCAGCTAAAATGTCAAAGATCATGGAAAAGGAGTTTGTAAACTCCAGTTCAGATCCATGCAGTCAGGAGATTATTCCAGAAGTTGATGCCCTATCATCAAAGATCTCTAACAAGTTGCAGAGTCAGAGTAATTTTGCAAGAAAAAATGACAGCGCTCTTTCAGTGGTAAAACCTGAACCCATTGAAGATGCAGGTGCAACCTTTCCAAGTTTCACAATCTCCTGTTTGGCAACTGACCGTCAATCTTTTCTGGAGTTGCCAAAGAGTTTGCCATTACCATTGAACACCATGAAGGGAAGGTCTAAACTGGATAGGAGGATAGTTTATCTTCAAGGTCCTGATAAGAGATTGTGGCCAGTCCTGTACATTCAGAAATTTTTCTTCAGAACTTTGGCAAATGGTTGGGAGGCTTTCAGCATGGCAAATAATATTGAACAAGGAGATCGATGTACTATTGAGGTCACAAATCAAACTGAAGGCATATGTAGTGTGCACATAGTTAAGATGAGAGATGATATGGAATTCTATGAAGAGTATGAGCACAGTCCTCTCATTGACCTGTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B3

Protein Analysis

1048

Amino Acids

117.25

Weight (kDa)

5.54

Isoelectric Point (pI)

48.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B3 PF02362 80 - 169 6e-10 B3 DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2762
Acc36I ACCTGC 1 cut(s) 2762
AccB1I GGYRCC 2 cut(s) 1081, 1684
AciI CCGC 2 cut(s) 355, 1386
AclWI GGATC 8 cut(s) 1457, 1819, 1842, 2141, 2464, 2562, 2575, 2627
AcoI YGGCCR 1 cut(s) 2933
AcvI CACGTG 1 cut(s) 347
AfaI GTAC 6 cut(s) 601, 1845, 2211, 2382, 2945, 3031
AfeI AGCGCT 1 cut(s) 2734
AfiI CCNNNNNNNGG 2 cut(s) 111, 136
AflII CTTAAG 1 cut(s) 2441
AflIII ACRYGT 2 cut(s) 774, 2383
AhdI GACNNNNNGTC 2 cut(s) 775, 2355
AhlI ACTAGT 1 cut(s) 68
AjnI CCWGG 2 cut(s) 389, 2079
AleI CACNNNNGTG 1 cut(s) 1112
AluBI AGCT 9 cut(s) 30, 164, 969, 1505, 1631, 2154, 2502, 2552, 2585
AluI AGCT 9 cut(s) 30, 164, 969, 1505, 1631, 2154, 2502, 2552, 2585
Alw21I GWGCWC 3 cut(s) 136, 3075, 3123
Alw26I GTCTC 5 cut(s) 20, 527, 1706, 1760, 1884
Alw44I GTGCAC 1 cut(s) 3071
AlwI GGATC 8 cut(s) 1457, 1819, 1842, 2141, 2464, 2562, 2575, 2627
AlwNI CAGNNNCTG 1 cut(s) 2465
Aor51HI AGCGCT 1 cut(s) 2734
AoxI GGCC 3 cut(s) 393, 2007, 2933
ApaLI GTGCAC 1 cut(s) 3071
ApeKI GCWGC 5 cut(s) 905, 1196, 2076, 2465, 2502
Asp700I GAANNNNTTC 2 cut(s) 2290, 2957
AspLEI GCGC 2 cut(s) 753, 2735
AspS9I GGNCC 6 cut(s) 34, 393, 635, 1509, 1625, 2915
AsuHPI GGTGA 2 cut(s) 2005, 2071
AsuII TTCGAA 2 cut(s) 159, 1187
AvaII GGWCC 5 cut(s) 34, 635, 1509, 1625, 2915
BaeGI GKGCMC 2 cut(s) 1084, 3075
BaeI ACNNNNGTAYC 2 cut(s) 2097, 2130
BalI TGGCCA 1 cut(s) 2935
BamHI GGATCC 1 cut(s) 2567
BanI GGYRCC 2 cut(s) 1081, 1684
BanII GRGCYC 1 cut(s) 829
BbrPI CACGTG 1 cut(s) 347
BbsI GAAGAC 2 cut(s) 51, 451
Bbv12I GWGCWC 3 cut(s) 136, 3075, 3123
BbvI GCAGC 5 cut(s) 892, 1208, 2088, 2452, 2489
BccI CCATC 9 cut(s) 139, 402, 566, 781, 881, 1520, 1802, 2039, 2447
BceAI ACGGC 1 cut(s) 1672
BcgI CGANNNNNNTGC 2 cut(s) 149, 183
BciT130I CCWGG 2 cut(s) 391, 2081
BciVI GTATCC 2 cut(s) 2020, 2098
BclI TGATCA 2 cut(s) 1234, 1965
BcoDI GTCTC 5 cut(s) 20, 527, 1706, 1760, 1884
BcuI ACTAGT 1 cut(s) 68
BfaI CTAG 5 cut(s) 69, 375, 425, 846, 1878
BfmI CTRYAG 1 cut(s) 906
BfoI RGCGCY 1 cut(s) 2736
BfrI CTTAAG 1 cut(s) 2441
BfuAI ACCTGC 1 cut(s) 2762
BfuI GTATCC 2 cut(s) 2020, 2098
BglII AGATCT 3 cut(s) 1170, 1588, 2682
BisI GCNGC 5 cut(s) 906, 1197, 2077, 2466, 2503
BlsI GCNGC 5 cut(s) 907, 1198, 2078, 2467, 2504
Bme1390I CCNGG 2 cut(s) 391, 2081
Bme18I GGWCC 5 cut(s) 34, 635, 1509, 1625, 2915
BmeRI GACNNNNNGTC 2 cut(s) 775, 2355
BmgT120I GGNCC 6 cut(s) 34, 393, 635, 1509, 1625, 2915
BmiI GGNNCC 7 cut(s) 220, 388, 1083, 1510, 1686, 1860, 2569
BmrFI CCNGG 2 cut(s) 391, 2081
BmrI ACTGGG 1 cut(s) 1917
BmsI GCATC 7 cut(s) 1012, 1034, 1732, 2245, 2267, 2656, 2758
BmuI ACTGGG 1 cut(s) 1917
BoxI GACNNNNGTC 1 cut(s) 1284
BpiI GAAGAC 2 cut(s) 51, 451
BplI GAGNNNNNCTC 4 cut(s) 1160, 1192, 1757, 1789
BpmI CTGGAG 2 cut(s) 2608, 2852
Bpu14I TTCGAA 2 cut(s) 159, 1187
Bsa29I ATCGAT 2 cut(s) 2493, 3025
BsaAI YACGTR 1 cut(s) 347
BsaI GGTCTC 3 cut(s) 527, 1706, 1760
BsaJI CCNNGG 3 cut(s) 390, 1599, 1671
BsaWI WCCGGW 2 cut(s) 136, 2554
Bsc4I CCNNNNNNNGG 2 cut(s) 111, 136
Bse1I ACTGG 7 cut(s) 983, 1210, 1912, 2533, 2625, 2892, 2936
Bse3DI GCAATG 1 cut(s) 1237
BseBI CCWGG 2 cut(s) 391, 2081
BseCI ATCGAT 2 cut(s) 2493, 3025
BseDI CCNNGG 3 cut(s) 390, 1599, 1671
BseGI GGATG 5 cut(s) 413, 1103, 1378, 1723, 2406
BseLI CCNNNNNNNGG 2 cut(s) 111, 136
BseMI GCAATG 1 cut(s) 1237
BseMII CTCAG 8 cut(s) 194, 984, 1020, 1058, 1623, 1638, 1701, 2268
BseNI ACTGG 7 cut(s) 983, 1210, 1912, 2533, 2625, 2892, 2936
BseSI GKGCMC 2 cut(s) 1084, 3075
BseXI GCAGC 5 cut(s) 892, 1208, 2088, 2452, 2489
BseYI CCCAGC 1 cut(s) 1505
BsgI GTGCAG 1 cut(s) 189
BshFI GGCC 3 cut(s) 395, 2009, 2935
BshNI GGYRCC 2 cut(s) 1081, 1684
BshVI ATCGAT 2 cut(s) 2493, 3025
BsiHKAI GWGCWC 3 cut(s) 136, 3075, 3123
BsiSI CCGG 3 cut(s) 137, 1798, 2555
BslFI GGGAC 1 cut(s) 1522
BslI CCNNNNNNNGG 2 cut(s) 111, 136
BsmAI GTCTC 5 cut(s) 20, 527, 1706, 1760, 1884
BsmFI GGGAC 1 cut(s) 1522
BsmI GAATGC 4 cut(s) 418, 1799, 1807, 1952
BsnI GGCC 3 cut(s) 395, 2009, 2935
Bso31I GGTCTC 3 cut(s) 527, 1706, 1760
Bsp119I TTCGAA 2 cut(s) 159, 1187
Bsp1286I GDGCHC 5 cut(s) 136, 829, 1084, 3075, 3123
Bsp1407I TGTACA 2 cut(s) 2380, 2943
BspACI CCGC 2 cut(s) 355, 1386
BspANI GGCC 3 cut(s) 395, 2009, 2935
BspCNI CTCAG 8 cut(s) 193, 983, 1021, 1057, 1624, 1639, 1702, 2269
BspDI ATCGAT 2 cut(s) 2493, 3025
BspHI TCATGA 1 cut(s) 151
BspLI GGNNCC 7 cut(s) 220, 388, 1083, 1510, 1686, 1860, 2569
BspMAI CTGCAG 1 cut(s) 910
BspMI ACCTGC 1 cut(s) 2762
BspPI GGATC 8 cut(s) 1457, 1819, 1842, 2141, 2464, 2562, 2575, 2627
BspT104I TTCGAA 2 cut(s) 159, 1187
BspT107I GGYRCC 2 cut(s) 1081, 1684
BspTI CTTAAG 1 cut(s) 2441
BspTNI GGTCTC 3 cut(s) 527, 1706, 1760
BsrDI GCAATG 1 cut(s) 1237
BsrGI TGTACA 2 cut(s) 2380, 2943
BsrI ACTGG 7 cut(s) 983, 1210, 1912, 2533, 2625, 2892, 2936
BssECI CCNNGG 3 cut(s) 390, 1599, 1671
BssT1I CCWWGG 2 cut(s) 1599, 1671
Bst2UI CCWGG 2 cut(s) 391, 2081
Bst4CI ACNGT 5 cut(s) 264, 490, 604, 2819, 3125
Bst6I CTCTTC 4 cut(s) 135, 1161, 2118, 3105
BstAFI CTTAAG 1 cut(s) 2441
BstAPI GCANNNNNTGC 1 cut(s) 764
BstAUI TGTACA 2 cut(s) 2380, 2943
BstBAI YACGTR 1 cut(s) 347
BstBI TTCGAA 2 cut(s) 159, 1187
BstC8I GCNNGC 2 cut(s) 749, 2223
BstDEI CTNAG 9 cut(s) 180, 970, 1029, 1044, 1632, 1647, 1710, 2277, 2412
BstF5I GGATG 5 cut(s) 413, 1103, 1378, 1723, 2406
BstH2I RGCGCY 1 cut(s) 2736
BstHHI GCGC 2 cut(s) 753, 2735
BstMAI GTCTC 5 cut(s) 20, 527, 1706, 1760, 1884
BstMWI GCNNNNNNNGC 1 cut(s) 764
BstNI CCWGG 2 cut(s) 391, 2081
BstNSI RCATGY 2 cut(s) 778, 2387
BstPAI GACNNNNGTC 1 cut(s) 1284
BstSCI CCNGG 2 cut(s) 389, 2079
BstSFI CTRYAG 1 cut(s) 906
BstSLI GKGCMC 2 cut(s) 1084, 3075
BstV1I GCAGC 5 cut(s) 892, 1208, 2088, 2452, 2489
BstV2I GAAGAC 2 cut(s) 51, 451
BstX2I RGATCY 7 cut(s) 1170, 1462, 1588, 2146, 2567, 2632, 2682
BstXI CCANNNNNNTGG 1 cut(s) 590
BstYI RGATCY 7 cut(s) 1170, 1462, 1588, 2146, 2567, 2632, 2682
Bsu15I ATCGAT 2 cut(s) 2493, 3025
BsuI GTATCC 2 cut(s) 2020, 2098
BsuRI GGCC 3 cut(s) 395, 2009, 2935
BsuTUI ATCGAT 2 cut(s) 2493, 3025
BtsCI GGATG 5 cut(s) 413, 1103, 1378, 1723, 2406
BtsI GCAGTG 2 cut(s) 889, 915
BtsIMutI CAGTG 9 cut(s) 584, 609, 889, 915, 944, 990, 1707, 2466, 2748
BveI ACCTGC 1 cut(s) 2762
Cac8I GCNNGC 2 cut(s) 749, 2223
CaiI CAGNNNCTG 1 cut(s) 2465
CciI TCATGA 1 cut(s) 151
CfoI GCGC 2 cut(s) 753, 2735
Cfr13I GGNCC 6 cut(s) 34, 393, 635, 1509, 1625, 2915
ClaI ATCGAT 2 cut(s) 2493, 3025
Csp6I GTAC 6 cut(s) 600, 1844, 2210, 2381, 2944, 3030
CspCI CAANNNNNGTGG 2 cut(s) 1585, 1620
CviQI GTAC 6 cut(s) 600, 1844, 2210, 2381, 2944, 3030
DdeI CTNAG 9 cut(s) 180, 970, 1029, 1044, 1632, 1647, 1710, 2277, 2412
DriI GACNNNNNGTC 2 cut(s) 775, 2355
EaeI YGGCCR 1 cut(s) 2933
Eam1104I CTCTTC 4 cut(s) 135, 1161, 2118, 3105
Eam1105I GACNNNNNGTC 2 cut(s) 775, 2355
EarI CTCTTC 4 cut(s) 135, 1161, 2118, 3105
Eco130I CCWWGG 2 cut(s) 1599, 1671
Eco24I GRGCYC 1 cut(s) 829
Eco31I GGTCTC 3 cut(s) 527, 1706, 1760
Eco47I GGWCC 5 cut(s) 34, 635, 1509, 1625, 2915
Eco47III AGCGCT 1 cut(s) 2734
Eco72I CACGTG 1 cut(s) 347
EcoO109I RGGNCCY 1 cut(s) 2915
EcoRI GAATTC 1 cut(s) 3101
EcoRII CCWGG 2 cut(s) 389, 2079
EcoT14I CCWWGG 2 cut(s) 1599, 1671
EcoT22I ATGCAT 2 cut(s) 1027, 2260
EcoT38I GRGCYC 1 cut(s) 829
ErhI CCWWGG 2 cut(s) 1599, 1671
FalI AAGNNNNNCTT 2 cut(s) 510, 542
FaqI GGGAC 1 cut(s) 1522
FauNDI CATATG 1 cut(s) 3062
FbaI TGATCA 2 cut(s) 1234, 1965
Fnu4HI GCNGC 5 cut(s) 906, 1197, 2077, 2466, 2503
FokI GGATG 5 cut(s) 420, 1090, 1365, 1710, 2393
FriOI GRGCYC 1 cut(s) 829
Fsp4HI GCNGC 5 cut(s) 906, 1197, 2077, 2466, 2503
FspBI CTAG 5 cut(s) 69, 375, 425, 846, 1878
GlaI GCGC 2 cut(s) 752, 2734
GluI GCNGC 5 cut(s) 906, 1197, 2077, 2466, 2503
GsaI CCCAGC 1 cut(s) 1509
GsuI CTGGAG 2 cut(s) 2608, 2852
HaeII RGCGCY 1 cut(s) 2736
HaeIII GGCC 3 cut(s) 395, 2009, 2935
HapII CCGG 3 cut(s) 137, 1798, 2555
HhaI GCGC 2 cut(s) 753, 2735
Hin6I GCGC 2 cut(s) 751, 2733
HinP1I GCGC 2 cut(s) 751, 2733
HincII GTYRAC 1 cut(s) 1371
HindII GTYRAC 1 cut(s) 1371
HindIII AAGCTT 1 cut(s) 162
HpaII CCGG 3 cut(s) 137, 1798, 2555
HphI GGTGA 2 cut(s) 2005, 2071
Hpy166II GTNNAC 8 cut(s) 350, 479, 565, 1371, 1534, 2212, 2620, 3073
Hpy8I GTNNAC 8 cut(s) 350, 479, 565, 1371, 1534, 2212, 2620, 3073
HpyAV CCTTC 9 cut(s) 1026, 1336, 1629, 1738, 1972, 2259, 2866, 2871, 3050
HpyCH4III ACNGT 5 cut(s) 264, 490, 604, 2819, 3125
HpyCH4IV ACGT 4 cut(s) 346, 468, 2374, 2561
HpyF10VI GCNNNNNNNGC 1 cut(s) 764
HpyF3I CTNAG 9 cut(s) 180, 970, 1029, 1044, 1632, 1647, 1710, 2277, 2412
HpySE526I ACGT 4 cut(s) 346, 468, 2374, 2561
HspAI GCGC 2 cut(s) 751, 2733
Ksp22I TGATCA 2 cut(s) 1234, 1965
LmnI GCTCC 1 cut(s) 2557
Lsp1109I GCAGC 5 cut(s) 892, 1208, 2088, 2452, 2489
LweI GCATC 7 cut(s) 1012, 1034, 1732, 2245, 2267, 2656, 2758
MaeI CTAG 5 cut(s) 69, 375, 425, 846, 1878
MaeII ACGT 4 cut(s) 346, 468, 2374, 2561
MaeIII GTNAC 6 cut(s) 1114, 1655, 1993, 2059, 2557, 3040
MflI RGATCY 7 cut(s) 1170, 1462, 1588, 2146, 2567, 2632, 2682
MhlI GDGCHC 5 cut(s) 136, 829, 1084, 3075, 3123
MlsI TGGCCA 1 cut(s) 2935
MluNI TGGCCA 1 cut(s) 2935
MlyI GAGTC 5 cut(s) 1036, 1451, 1928, 2135, 2710
MmeI TCCRAC 2 cut(s) 1160, 1585
Mox20I TGGCCA 1 cut(s) 2935
Mph1103I ATGCAT 2 cut(s) 1027, 2260
MroXI GAANNNNTTC 2 cut(s) 2290, 2957
MscI TGGCCA 1 cut(s) 2935
MseI TTAA 9 cut(s) 381, 492, 975, 1868, 2133, 2192, 2301, 2442, 3081
MslI CAYNNNNRTG 6 cut(s) 78, 570, 723, 1112, 1381, 2382
Msp20I TGGCCA 1 cut(s) 2935
MspA1I CMGCKG 2 cut(s) 1631, 2502
MspCI CTTAAG 1 cut(s) 2441
MspI CCGG 3 cut(s) 137, 1798, 2555
MspR9I CCNGG 2 cut(s) 391, 2081
Mva1269I GAATGC 4 cut(s) 418, 1799, 1807, 1952
MvaI CCWGG 2 cut(s) 391, 2081
MwoI GCNNNNNNNGC 1 cut(s) 764
NdeI CATATG 1 cut(s) 3062
NlaIV GGNNCC 7 cut(s) 220, 388, 1083, 1510, 1686, 1860, 2569
NmuCI GTSAC 4 cut(s) 1114, 1993, 2059, 3040
NsiI ATGCAT 2 cut(s) 1027, 2260
NspI RCATGY 2 cut(s) 778, 2387
NspV TTCGAA 2 cut(s) 159, 1187
OliI CACNNNNGTG 1 cut(s) 1112
PagI TCATGA 1 cut(s) 151
PaqCI CACCTGC 1 cut(s) 2762
PciI ACATGT 2 cut(s) 774, 2383
PctI GAATGC 4 cut(s) 418, 1799, 1807, 1952
PdmI GAANNNNTTC 2 cut(s) 2290, 2957
PfeI GAWTC 9 cut(s) 196, 341, 523, 854, 938, 1100, 1580, 1700, 2186
PkrI GCNGC 5 cut(s) 907, 1198, 2078, 2467, 2504
PleI GAGTC 5 cut(s) 1036, 1450, 1927, 2134, 2709
PmaCI CACGTG 1 cut(s) 347
PmlI CACGTG 1 cut(s) 347
PpsI GAGTC 5 cut(s) 1036, 1450, 1927, 2134, 2709
Ppu21I YACGTR 1 cut(s) 347
PpuMI RGGWCCY 1 cut(s) 2915
PscI ACATGT 2 cut(s) 774, 2383
PshAI GACNNNNGTC 1 cut(s) 1284
Psp5II RGGWCCY 1 cut(s) 2915
Psp6I CCWGG 2 cut(s) 389, 2079
PspCI CACGTG 1 cut(s) 347
PspFI CCCAGC 1 cut(s) 1505
PspGI CCWGG 2 cut(s) 389, 2079
PspN4I GGNNCC 7 cut(s) 220, 388, 1083, 1510, 1686, 1860, 2569
PspPI GGNCC 6 cut(s) 34, 393, 635, 1509, 1625, 2915
PspPPI RGGWCCY 1 cut(s) 2915
PstI CTGCAG 1 cut(s) 910
PstNI CAGNNNCTG 1 cut(s) 2465
PsuI RGATCY 7 cut(s) 1170, 1462, 1588, 2146, 2567, 2632, 2682
PvuII CAGCTG 2 cut(s) 1631, 2502
RsaI GTAC 6 cut(s) 601, 1845, 2211, 2382, 2945, 3031
RsaNI GTAC 6 cut(s) 600, 1844, 2210, 2381, 2944, 3030
RseI CAYNNNNRTG 6 cut(s) 78, 570, 723, 1112, 1381, 2382
SaqAI TTAA 9 cut(s) 381, 492, 975, 1868, 2133, 2192, 2301, 2442, 3081
SatI GCNGC 5 cut(s) 906, 1197, 2077, 2466, 2503
Sau96I GGNCC 6 cut(s) 34, 393, 635, 1509, 1625, 2915
SchI GAGTC 5 cut(s) 1036, 1451, 1928, 2135, 2710
ScrFI CCNGG 2 cut(s) 391, 2081
SduI GDGCHC 5 cut(s) 136, 829, 1084, 3075, 3123
SfaNI GCATC 7 cut(s) 1012, 1034, 1732, 2245, 2267, 2656, 2758
SfcI CTRYAG 1 cut(s) 906
SfuI TTCGAA 2 cut(s) 159, 1187
SinI GGWCC 5 cut(s) 34, 635, 1509, 1625, 2915
SmiMI CAYNNNNRTG 6 cut(s) 78, 570, 723, 1112, 1381, 2382
SmlI CTYRAG 1 cut(s) 2441
SmoI CTYRAG 1 cut(s) 2441
SpeI ACTAGT 1 cut(s) 68
SsiI CCGC 2 cut(s) 355, 1386
SspI AATATT 2 cut(s) 2576, 3010
SspMI CTAG 5 cut(s) 69, 375, 425, 846, 1878
StyD4I CCNGG 2 cut(s) 389, 2079
StyI CCWWGG 2 cut(s) 1599, 1671
TaaI ACNGT 5 cut(s) 264, 490, 604, 2819, 3125
TaiI ACGT 4 cut(s) 349, 471, 2377, 2564
TaqI TCGA 5 cut(s) 159, 228, 1187, 2493, 3025
TatI WGTACW 4 cut(s) 599, 2380, 2943, 3029
TfiI GAWTC 9 cut(s) 196, 341, 523, 854, 938, 1100, 1580, 1700, 2186
Tru1I TTAA 9 cut(s) 381, 492, 975, 1868, 2133, 2192, 2301, 2442, 3081
Tru9I TTAA 9 cut(s) 381, 492, 975, 1868, 2133, 2192, 2301, 2442, 3081
TscAI CASTG 9 cut(s) 584, 609, 889, 915, 951, 990, 1714, 2466, 2748
TseFI GTSAC 4 cut(s) 1114, 1993, 2059, 3040
TseI GCWGC 5 cut(s) 905, 1196, 2076, 2465, 2502
Tsp45I GTSAC 4 cut(s) 1114, 1993, 2059, 3040
TspGWI ACGGA 1 cut(s) 604
TspRI CASTG 9 cut(s) 584, 609, 889, 915, 951, 990, 1714, 2466, 2748
Vha464I CTTAAG 1 cut(s) 2441
VneI GTGCAC 1 cut(s) 3071
VpaK11BI GGWCC 5 cut(s) 34, 635, 1509, 1625, 2915
XceI RCATGY 2 cut(s) 778, 2387
XcmI CCANNNNNNNNNTGG 1 cut(s) 1678
XmnI GAANNNNTTC 2 cut(s) 2290, 2957
XspI CTAG 5 cut(s) 69, 375, 425, 846, 1878
Zsp2I ATGCAT 2 cut(s) 1027, 2260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.