Rh7BG119400

B3 DNA binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0002691
Physical Location & Seq
Reverse (-)
8899326 .. 8906608
7283 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG119400.1

Sequence Viewer

Length: 3129 bp
ATGGAAAGTCATTGTCTCAATCATATTAGCTTGGTCCTTTCAGAAGACAAACTGATTATATCATCAACAAGTCATGGTTGTGTTTATCTTACTTTATCTTCCACCATTTTGAGGGTAGCAATAATCAACCGAGCACCGGAAGAGATGGTTCATGATTTCGAAGCTTGTGCAGATTGCACTCAGAAGTGTTTGCTGATTCATGGGAATAAGAAAAGTGGTTCCCATATCGAAACCTCTTTTTTCAAAATCATGTTTGGAAAACAGTTTTCTAAATTTATGGAATTGCCTCCAAAAGTTGCTCGTATTTTGTTATTGTCTGATCGGAGAACTTTTCTTGAAGATTCATGTGGACTGCGGTGGAAAGTTGCAATTTCTAGTGTTAATGGTTCCTGGGCCTTTCAACAAGGATGGAATGCTTTTGCACTAGACCATGACCTACAAGTAGGAGATTTTCTGGTCTTCAATTACATTGTGGGTTCACATTTTACTGTTAAGATATATGACAACTCTGGGTGTGAAGTGAATCTTTTTGAGACCATACATCAGAACAACAGAAATAGGGTTCACACAGATGGTCAGTGCCACACCATTGGTAAAAGTACAGTGAGCAAATCCGTTTCAGATACCTTTGCTGGTCCAGATGCAGAAATAAGTAAATGCTTGAATGAAGTGCATGATATGAAGAAACCTCTAATTATCACAGAAAATGCTTCAGATCACGATGATGATTATGAAAGGTCAAAGTGCAAGCGCAAAGCAGAATTTGCTGACGACATGTCATGTATGATGGAAAGAGAATATGGACACCAACAAGGAGAGAACAGAGCCCGTATTCTTGATTTGTCTAGTTTTGAATCATTCAAAAAGATAAAAATCTGTGGCAGTGATGGAAGCAATAAAGTTGTTGCAGTGAATGAAACACATTCTCATCATGCTGATTCATCACTGAAATTGAGAAATGAAGTTAGCTCAGTTAAAATTCCAGTGGCTAAAGAGTTAGTGGATAGAGTAATTCCTTCAGATGCATCTGAGATTGAAGGGACTCAGAAAAATAACTATTCTGAATACAAGGTAAAGGGGGCACCCCTGTCTGATAAAGATTCATCCACCAATGTGACCTCTGGACATCTCTTTCCAACACTTCCTGAAAATCCTGAACAAAAGGAAGAGATCTTCTCTGGTATTTCGAACAGAGCAGCCAAAAAATGCCAGTCTGCTAATGTATCAGGCAATGATCATCAGGTAGCAGTATCAGGAAATGAACATGATTTGATTGATGACACTTGTCAAAGTGCCAACAAAAAAATTCCTGAAATTTCAAAGTCCTGCGATAAAGTGATGAAGGTCATTGAAAACAAGCCTGTGGAGTTGACTTCACATCCATGCGGTCAGGAGGTCATTCCAGAAAATATTGTGATGATGAACATTGGAAAAGAGTCTGTGGATTTGACTTCAGATCCATGCAGTCGGGAGGTCATTCCAGAAAGAAAGGATAAAGCTGGGACCATCATTGAAAATGTTATTGTGGACTTGACTTCAGATCAATGCAGTCAGGAGGTCATTGAAAAAGAGGAATCATTAGATCTTTCCACCAAGGTTGGAATAGAAATTCCTTCAGGTCCAGCTGAGTTTGAAAGGACTGAGGAATGTAACAAATCTGAAGCCAAGGTCAATAGGGTGCCGTCTGATAAAGATTCATGCACTGAGACCTCTGGGCATCCCTTCCCAACACATTCTGAAAATCCTGAAGAAAATGGAGAGACCACCTCAAAGAAAGCAACAAAAGAATGCTGGAATGCTGATGGATCAGAATTATTATCAGGCAAGGATCAGGTGGTACTATCACAAAAGGAACCTGATTTAATGTATGCTAGTTCCCCAAGAGACAACAAGAAATTGATTGGGATTTCAGAGTCTATTCATAATCCCCTTACTTTTGAATGCCAAAATTATGATGTGATCATCAATGAGAAGGAGTCTGTTGAGGTGACTTGTCAGGAGGTCATTCCACAGAGAAAGGATACCATCATCATTGAAAACAAGTCTGTTGAGGTGACTTTAGAACCATGCAGCCAGGAGGTTATTCCAGAAAGAAAGGATACAATCGTCATTGGAGAAGAGTCTGTTGATTTGACTTTAGATCCAAGCTGTCAAGAGTTCATTCCAGAAACAAAGGGGGAATCATTAAAGGTTTTCAACAGGGTACACAGACAGTGTGCTAATACAAATATAAGAGCAGTTCCTTCAGATGCATCTGACCTTGAAAGGACTGAGAAAAGAAATTATTCTGAAGTTAAGGTCAGAAAGGTATCAACTTCTGATAAAGTTCCACACACCAAGCAGACCTCTTGTCATCTCAACCCAATACGTCATGTACATGTTGAAGAAGATAAAACAAACATCCCTAAGATTTCAAACAGAGGAATAAACAAACTTAAGACTACTGATGGATCAGTGGCTGCATCCCAAAAGGAACAAGTTTCTATCGATGACAGCTGTCAACAAGCCAAAAAGAAATTGACTGGAATTTCAAAGTCTTTTGCTTCTGGATCCCAATATTATTCAGCTAAAATGTCAAAGGTCATGGAAAAGGAGTTTGTAAATTCCAGTTCAGATCCATGCAGTCAGGAGATTATTCCAGAAGTTGATGCCCTATCATCAAAGATCTCTAACAAGTTGCAGGGTCAGAGTAATTTTGCAAGAAAAAATGACAGCGCTCTTTCAGTGGTAAAACCTGAACCCATTGAAGATGCAGGTGCAACCTTTCCAAGTTTCACAATCTCCTGTTTGGCAACTGATCGTCAATCTTTTCTGGAGTTGCCAAAGAGTTTGCCATTACCCTTGAACACCATGAAGGGAAGGTCTAAACTGGATAGGAGGATAGTTTATCTTCAAGGTCCTGATAAGAGATTGTGGCCAGTCCTCTACATTCAGAAATTTTTCTTCAGAACTTTGGCAAATGGTTGGGAGGCTTTCAGCATGGCAAATAACATTGAACAAGGAGATCGATGTACTATTGAGGTCACAAATCAAACTGAAGGCATATGTAGTGTGCACATAGTTAAGATGAGAGATGATATGGAATTCTATGAAGAGTATGAGCACAATCCTCTCATTGATCTGTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B3

Protein Analysis

1042

Amino Acids

116.34

Weight (kDa)

5.48

Isoelectric Point (pI)

48.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B3 PF02362 80 - 169 3.9e-10 B3 DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2744
Acc36I ACCTGC 1 cut(s) 2744
AccB1I GGYRCC 2 cut(s) 1081, 1678
AciI CCGC 2 cut(s) 355, 1386
AclWI GGATC 8 cut(s) 1451, 1813, 1836, 2135, 2458, 2544, 2557, 2609
AcoI YGGCCR 1 cut(s) 2915
AfaI GTAC 5 cut(s) 601, 1839, 2205, 2376, 3013
AfeI AGCGCT 1 cut(s) 2716
AfiI CCNNNNNNNGG 2 cut(s) 111, 136
AflII CTTAAG 1 cut(s) 2435
AflIII ACRYGT 2 cut(s) 774, 2377
AhdI GACNNNNNGTC 2 cut(s) 775, 2349
AjnI CCWGG 2 cut(s) 389, 2073
AleI CACNNNNGTG 1 cut(s) 1112
AluBI AGCT 8 cut(s) 30, 164, 969, 1499, 1625, 2148, 2496, 2567
AluI AGCT 8 cut(s) 30, 164, 969, 1499, 1625, 2148, 2496, 2567
Alw21I GWGCWC 3 cut(s) 136, 3057, 3105
Alw26I GTCTC 5 cut(s) 20, 527, 1700, 1754, 1878
Alw44I GTGCAC 1 cut(s) 3053
AlwI GGATC 8 cut(s) 1451, 1813, 1836, 2135, 2458, 2544, 2557, 2609
AlwNI CAGNNNCTG 1 cut(s) 2459
Aor51HI AGCGCT 1 cut(s) 2716
AoxI GGCC 2 cut(s) 393, 2915
ApaLI GTGCAC 1 cut(s) 3053
ApeKI GCWGC 3 cut(s) 1196, 2070, 2459
Asp700I GAANNNNTTC 2 cut(s) 2284, 2939
AspLEI GCGC 2 cut(s) 753, 2717
AspS9I GGNCC 6 cut(s) 34, 393, 635, 1503, 1619, 2897
AsuHPI GGTGA 2 cut(s) 1999, 2065
AsuII TTCGAA 2 cut(s) 159, 1187
AvaII GGWCC 5 cut(s) 34, 635, 1503, 1619, 2897
BaeGI GKGCMC 2 cut(s) 1084, 3057
BaeI ACNNNNGTAYC 2 cut(s) 2091, 2124
BalI TGGCCA 1 cut(s) 2917
BamHI GGATCC 1 cut(s) 2549
BanI GGYRCC 2 cut(s) 1081, 1678
BanII GRGCYC 1 cut(s) 829
BbsI GAAGAC 2 cut(s) 51, 451
Bbv12I GWGCWC 3 cut(s) 136, 3057, 3105
BbvI GCAGC 3 cut(s) 1208, 2082, 2446
BccI CCATC 9 cut(s) 139, 402, 566, 781, 881, 1514, 1796, 2033, 2441
BceAI ACGGC 1 cut(s) 1666
BcgI CGANNNNNNTGC 2 cut(s) 149, 183
BciT130I CCWGG 2 cut(s) 391, 2075
BciVI GTATCC 2 cut(s) 2014, 2092
BclI TGATCA 2 cut(s) 1234, 1959
BcoDI GTCTC 5 cut(s) 20, 527, 1700, 1754, 1878
BfaI CTAG 4 cut(s) 375, 425, 846, 1872
BfoI RGCGCY 1 cut(s) 2718
BfrI CTTAAG 1 cut(s) 2435
BfuAI ACCTGC 1 cut(s) 2744
BfuI GTATCC 2 cut(s) 2014, 2092
BglII AGATCT 3 cut(s) 1170, 1582, 2664
BisI GCNGC 3 cut(s) 1197, 2071, 2460
BlsI GCNGC 3 cut(s) 1198, 2072, 2461
Bme1390I CCNGG 2 cut(s) 391, 2075
Bme18I GGWCC 5 cut(s) 34, 635, 1503, 1619, 2897
BmeRI GACNNNNNGTC 2 cut(s) 775, 2349
BmgT120I GGNCC 6 cut(s) 34, 393, 635, 1503, 1619, 2897
BmiI GGNNCC 7 cut(s) 220, 388, 1083, 1504, 1680, 1854, 2551
BmrFI CCNGG 2 cut(s) 391, 2075
BmsI GCATC 9 cut(s) 631, 1012, 1034, 1726, 2239, 2261, 2471, 2638, 2740
BoxI GACNNNNGTC 2 cut(s) 1284, 2496
BpiI GAAGAC 2 cut(s) 51, 451
BplI GAGNNNNNCTC 4 cut(s) 1160, 1192, 1751, 1783
BpmI CTGGAG 1 cut(s) 2834
Bpu14I TTCGAA 2 cut(s) 159, 1187
Bsa29I ATCGAT 2 cut(s) 2487, 3007
BsaBI GATNNNNATC 1 cut(s) 872
BsaI GGTCTC 3 cut(s) 527, 1700, 1754
BsaJI CCNNGG 3 cut(s) 390, 1593, 1665
BsaWI WCCGGW 1 cut(s) 136
Bsc4I CCNNNNNNNGG 2 cut(s) 111, 136
Bse1I ACTGG 6 cut(s) 983, 1210, 2527, 2607, 2874, 2918
Bse3DI GCAATG 1 cut(s) 1237
Bse8I GATNNNNATC 1 cut(s) 872
BseBI CCWGG 2 cut(s) 391, 2075
BseCI ATCGAT 2 cut(s) 2487, 3007
BseDI CCNNGG 3 cut(s) 390, 1593, 1665
BseGI GGATG 6 cut(s) 413, 1103, 1378, 1717, 2400, 2462
BseJI GATNNNNATC 1 cut(s) 872
BseLI CCNNNNNNNGG 2 cut(s) 111, 136
BseMI GCAATG 1 cut(s) 1237
BseMII CTCAG 8 cut(s) 194, 984, 1020, 1058, 1617, 1632, 1695, 2262
BseNI ACTGG 6 cut(s) 983, 1210, 2527, 2607, 2874, 2918
BseSI GKGCMC 2 cut(s) 1084, 3057
BseXI GCAGC 3 cut(s) 1208, 2082, 2446
BseYI CCCAGC 1 cut(s) 1499
BsgI GTGCAG 1 cut(s) 189
BshFI GGCC 2 cut(s) 395, 2917
BshNI GGYRCC 2 cut(s) 1081, 1678
BshVI ATCGAT 2 cut(s) 2487, 3007
BsiHKAI GWGCWC 3 cut(s) 136, 3057, 3105
BsiSI CCGG 1 cut(s) 137
BslFI GGGAC 2 cut(s) 1054, 1516
BslI CCNNNNNNNGG 2 cut(s) 111, 136
BsmAI GTCTC 5 cut(s) 20, 527, 1700, 1754, 1878
BsmFI GGGAC 2 cut(s) 1054, 1516
BsmI GAATGC 4 cut(s) 418, 1793, 1801, 1946
BsnI GGCC 2 cut(s) 395, 2917
Bso31I GGTCTC 3 cut(s) 527, 1700, 1754
Bsp119I TTCGAA 2 cut(s) 159, 1187
Bsp1286I GDGCHC 5 cut(s) 136, 829, 1084, 3057, 3105
Bsp1407I TGTACA 1 cut(s) 2374
BspACI CCGC 2 cut(s) 355, 1386
BspANI GGCC 2 cut(s) 395, 2917
BspCNI CTCAG 8 cut(s) 193, 983, 1021, 1057, 1618, 1633, 1696, 2263
BspDI ATCGAT 2 cut(s) 2487, 3007
BspHI TCATGA 1 cut(s) 151
BspLI GGNNCC 7 cut(s) 220, 388, 1083, 1504, 1680, 1854, 2551
BspMI ACCTGC 1 cut(s) 2744
BspPI GGATC 8 cut(s) 1451, 1813, 1836, 2135, 2458, 2544, 2557, 2609
BspT104I TTCGAA 2 cut(s) 159, 1187
BspT107I GGYRCC 2 cut(s) 1081, 1678
BspTI CTTAAG 1 cut(s) 2435
BspTNI GGTCTC 3 cut(s) 527, 1700, 1754
BsrDI GCAATG 1 cut(s) 1237
BsrGI TGTACA 1 cut(s) 2374
BsrI ACTGG 6 cut(s) 983, 1210, 2527, 2607, 2874, 2918
BssECI CCNNGG 3 cut(s) 390, 1593, 1665
BssT1I CCWWGG 2 cut(s) 1593, 1665
Bst2UI CCWGG 2 cut(s) 391, 2075
Bst4CI ACNGT 4 cut(s) 264, 490, 604, 2214
Bst6I CTCTTC 4 cut(s) 135, 1161, 2112, 3087
BstAFI CTTAAG 1 cut(s) 2435
BstAPI GCANNNNNTGC 1 cut(s) 764
BstAUI TGTACA 1 cut(s) 2374
BstBI TTCGAA 2 cut(s) 159, 1187
BstC8I GCNNGC 1 cut(s) 749
BstDEI CTNAG 9 cut(s) 180, 970, 1029, 1044, 1626, 1641, 1704, 2271, 2406
BstF5I GGATG 6 cut(s) 413, 1103, 1378, 1717, 2400, 2462
BstH2I RGCGCY 1 cut(s) 2718
BstHHI GCGC 2 cut(s) 753, 2717
BstMAI GTCTC 5 cut(s) 20, 527, 1700, 1754, 1878
BstMWI GCNNNNNNNGC 1 cut(s) 764
BstNI CCWGG 2 cut(s) 391, 2075
BstNSI RCATGY 2 cut(s) 778, 2381
BstPAI GACNNNNGTC 2 cut(s) 1284, 2496
BstSCI CCNGG 2 cut(s) 389, 2073
BstSLI GKGCMC 2 cut(s) 1084, 3057
BstV1I GCAGC 3 cut(s) 1208, 2082, 2446
BstV2I GAAGAC 2 cut(s) 51, 451
BstX2I RGATCY 7 cut(s) 1170, 1456, 1582, 2140, 2549, 2614, 2664
BstXI CCANNNNNNTGG 1 cut(s) 590
BstYI RGATCY 7 cut(s) 1170, 1456, 1582, 2140, 2549, 2614, 2664
Bsu15I ATCGAT 2 cut(s) 2487, 3007
BsuI GTATCC 2 cut(s) 2014, 2092
BsuRI GGCC 2 cut(s) 395, 2917
BsuTUI ATCGAT 2 cut(s) 2487, 3007
BtsCI GGATG 6 cut(s) 413, 1103, 1378, 1717, 2400, 2462
BtsI GCAGTG 2 cut(s) 889, 915
BveI ACCTGC 1 cut(s) 2744
Cac8I GCNNGC 1 cut(s) 749
CaiI CAGNNNCTG 1 cut(s) 2459
CciI TCATGA 1 cut(s) 151
CfoI GCGC 2 cut(s) 753, 2717
Cfr13I GGNCC 6 cut(s) 34, 393, 635, 1503, 1619, 2897
ClaI ATCGAT 2 cut(s) 2487, 3007
Csp6I GTAC 5 cut(s) 600, 1838, 2204, 2375, 3012
CspCI CAANNNNNGTGG 2 cut(s) 1579, 1614
CviQI GTAC 5 cut(s) 600, 1838, 2204, 2375, 3012
DdeI CTNAG 9 cut(s) 180, 970, 1029, 1044, 1626, 1641, 1704, 2271, 2406
DriI GACNNNNNGTC 2 cut(s) 775, 2349
EaeI YGGCCR 1 cut(s) 2915
Eam1104I CTCTTC 4 cut(s) 135, 1161, 2112, 3087
Eam1105I GACNNNNNGTC 2 cut(s) 775, 2349
EarI CTCTTC 4 cut(s) 135, 1161, 2112, 3087
Eco130I CCWWGG 2 cut(s) 1593, 1665
Eco24I GRGCYC 1 cut(s) 829
Eco31I GGTCTC 3 cut(s) 527, 1700, 1754
Eco47I GGWCC 5 cut(s) 34, 635, 1503, 1619, 2897
Eco47III AGCGCT 1 cut(s) 2716
EcoO109I RGGNCCY 1 cut(s) 2897
EcoRI GAATTC 1 cut(s) 3083
EcoRII CCWGG 2 cut(s) 389, 2073
EcoT14I CCWWGG 2 cut(s) 1593, 1665
EcoT22I ATGCAT 2 cut(s) 1027, 2254
EcoT38I GRGCYC 1 cut(s) 829
ErhI CCWWGG 2 cut(s) 1593, 1665
FalI AAGNNNNNCTT 2 cut(s) 510, 542
FaqI GGGAC 2 cut(s) 1054, 1516
FauNDI CATATG 1 cut(s) 3044
FbaI TGATCA 2 cut(s) 1234, 1959
Fnu4HI GCNGC 3 cut(s) 1197, 2071, 2460
FokI GGATG 6 cut(s) 420, 1090, 1365, 1704, 2387, 2449
FriOI GRGCYC 1 cut(s) 829
Fsp4HI GCNGC 3 cut(s) 1197, 2071, 2460
FspBI CTAG 4 cut(s) 375, 425, 846, 1872
GlaI GCGC 2 cut(s) 752, 2716
GluI GCNGC 3 cut(s) 1197, 2071, 2460
GsaI CCCAGC 1 cut(s) 1503
GsuI CTGGAG 1 cut(s) 2834
HaeII RGCGCY 1 cut(s) 2718
HaeIII GGCC 2 cut(s) 395, 2917
HapII CCGG 1 cut(s) 137
HhaI GCGC 2 cut(s) 753, 2717
Hin6I GCGC 2 cut(s) 751, 2715
HinP1I GCGC 2 cut(s) 751, 2715
HincII GTYRAC 2 cut(s) 1371, 2501
HindII GTYRAC 2 cut(s) 1371, 2501
HindIII AAGCTT 1 cut(s) 162
HpaII CCGG 1 cut(s) 137
HphI GGTGA 2 cut(s) 1999, 2065
Hpy166II GTNNAC 8 cut(s) 350, 479, 565, 1371, 1528, 2206, 2501, 3055
Hpy8I GTNNAC 8 cut(s) 350, 479, 565, 1371, 1528, 2206, 2501, 3055
HpyCH4III ACNGT 4 cut(s) 264, 490, 604, 2214
HpyCH4IV ACGT 1 cut(s) 2368
HpyF10VI GCNNNNNNNGC 1 cut(s) 764
HpyF3I CTNAG 9 cut(s) 180, 970, 1029, 1044, 1626, 1641, 1704, 2271, 2406
HpySE526I ACGT 1 cut(s) 2368
HspAI GCGC 2 cut(s) 751, 2715
Ksp22I TGATCA 2 cut(s) 1234, 1959
Lsp1109I GCAGC 3 cut(s) 1208, 2082, 2446
LweI GCATC 9 cut(s) 631, 1012, 1034, 1726, 2239, 2261, 2471, 2638, 2740
MaeI CTAG 4 cut(s) 375, 425, 846, 1872
MaeII ACGT 1 cut(s) 2368
MaeIII GTNAC 5 cut(s) 1114, 1649, 1987, 2053, 3022
MflI RGATCY 7 cut(s) 1170, 1456, 1582, 2140, 2549, 2614, 2664
MhlI GDGCHC 5 cut(s) 136, 829, 1084, 3057, 3105
MlsI TGGCCA 1 cut(s) 2917
MluNI TGGCCA 1 cut(s) 2917
MlyI GAGTC 5 cut(s) 1036, 1445, 1922, 1985, 2129
MmeI TCCRAC 2 cut(s) 1160, 1579
Mox20I TGGCCA 1 cut(s) 2917
Mph1103I ATGCAT 2 cut(s) 1027, 2254
MroXI GAANNNNTTC 2 cut(s) 2284, 2939
MscI TGGCCA 1 cut(s) 2917
MseI TTAA 8 cut(s) 381, 492, 975, 1862, 2186, 2295, 2436, 3063
MslI CAYNNNNRTG 6 cut(s) 78, 570, 723, 1112, 1381, 2376
Msp20I TGGCCA 1 cut(s) 2917
MspA1I CMGCKG 2 cut(s) 1625, 2496
MspCI CTTAAG 1 cut(s) 2435
MspI CCGG 1 cut(s) 137
MspR9I CCNGG 2 cut(s) 391, 2075
Mva1269I GAATGC 4 cut(s) 418, 1793, 1801, 1946
MvaI CCWGG 2 cut(s) 391, 2075
MwoI GCNNNNNNNGC 1 cut(s) 764
NdeI CATATG 1 cut(s) 3044
NlaIV GGNNCC 7 cut(s) 220, 388, 1083, 1504, 1680, 1854, 2551
NmuCI GTSAC 4 cut(s) 1114, 1987, 2053, 3022
NsiI ATGCAT 2 cut(s) 1027, 2254
NspI RCATGY 2 cut(s) 778, 2381
NspV TTCGAA 2 cut(s) 159, 1187
OliI CACNNNNGTG 1 cut(s) 1112
PagI TCATGA 1 cut(s) 151
PaqCI CACCTGC 1 cut(s) 2744
PciI ACATGT 2 cut(s) 774, 2377
PctI GAATGC 4 cut(s) 418, 1793, 1801, 1946
PdmI GAANNNNTTC 2 cut(s) 2284, 2939
PfeI GAWTC 9 cut(s) 196, 341, 523, 854, 938, 1100, 1574, 1694, 2180
PkrI GCNGC 3 cut(s) 1198, 2072, 2461
PleI GAGTC 5 cut(s) 1036, 1444, 1921, 1984, 2128
PpsI GAGTC 5 cut(s) 1036, 1444, 1921, 1984, 2128
PpuMI RGGWCCY 1 cut(s) 2897
PscI ACATGT 2 cut(s) 774, 2377
PshAI GACNNNNGTC 2 cut(s) 1284, 2496
Psp5II RGGWCCY 1 cut(s) 2897
Psp6I CCWGG 2 cut(s) 389, 2073
PspFI CCCAGC 1 cut(s) 1499
PspGI CCWGG 2 cut(s) 389, 2073
PspN4I GGNNCC 7 cut(s) 220, 388, 1083, 1504, 1680, 1854, 2551
PspPI GGNCC 6 cut(s) 34, 393, 635, 1503, 1619, 2897
PspPPI RGGWCCY 1 cut(s) 2897
PstNI CAGNNNCTG 1 cut(s) 2459
PsuI RGATCY 7 cut(s) 1170, 1456, 1582, 2140, 2549, 2614, 2664
PvuII CAGCTG 2 cut(s) 1625, 2496
RsaI GTAC 5 cut(s) 601, 1839, 2205, 2376, 3013
RsaNI GTAC 5 cut(s) 600, 1838, 2204, 2375, 3012
RseI CAYNNNNRTG 6 cut(s) 78, 570, 723, 1112, 1381, 2376
SaqAI TTAA 8 cut(s) 381, 492, 975, 1862, 2186, 2295, 2436, 3063
SatI GCNGC 3 cut(s) 1197, 2071, 2460
Sau96I GGNCC 6 cut(s) 34, 393, 635, 1503, 1619, 2897
SchI GAGTC 5 cut(s) 1036, 1445, 1922, 1985, 2129
ScrFI CCNGG 2 cut(s) 391, 2075
SduI GDGCHC 5 cut(s) 136, 829, 1084, 3057, 3105
SfaNI GCATC 9 cut(s) 631, 1012, 1034, 1726, 2239, 2261, 2471, 2638, 2740
SfuI TTCGAA 2 cut(s) 159, 1187
SinI GGWCC 5 cut(s) 34, 635, 1503, 1619, 2897
SmiMI CAYNNNNRTG 6 cut(s) 78, 570, 723, 1112, 1381, 2376
SmlI CTYRAG 1 cut(s) 2435
SmoI CTYRAG 1 cut(s) 2435
SsiI CCGC 2 cut(s) 355, 1386
SspI AATATT 2 cut(s) 1411, 2558
SspMI CTAG 4 cut(s) 375, 425, 846, 1872
StyD4I CCNGG 2 cut(s) 389, 2073
StyI CCWWGG 2 cut(s) 1593, 1665
TaaI ACNGT 4 cut(s) 264, 490, 604, 2214
TaiI ACGT 1 cut(s) 2371
TaqI TCGA 5 cut(s) 159, 228, 1187, 2487, 3007
TatI WGTACW 3 cut(s) 599, 2374, 3011
TfiI GAWTC 9 cut(s) 196, 341, 523, 854, 938, 1100, 1574, 1694, 2180
Tru1I TTAA 8 cut(s) 381, 492, 975, 1862, 2186, 2295, 2436, 3063
Tru9I TTAA 8 cut(s) 381, 492, 975, 1862, 2186, 2295, 2436, 3063
TseFI GTSAC 4 cut(s) 1114, 1987, 2053, 3022
TseI GCWGC 3 cut(s) 1196, 2070, 2459
Tsp45I GTSAC 4 cut(s) 1114, 1987, 2053, 3022
TspGWI ACGGA 1 cut(s) 604
Vha464I CTTAAG 1 cut(s) 2435
VneI GTGCAC 1 cut(s) 3053
VpaK11BI GGWCC 5 cut(s) 34, 635, 1503, 1619, 2897
XceI RCATGY 2 cut(s) 778, 2381
XmnI GAANNNNTTC 2 cut(s) 2284, 2939
XspI CTAG 4 cut(s) 375, 425, 846, 1872
Zsp2I ATGCAT 2 cut(s) 1027, 2254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.