Rorug06G0510100

Adenine guanine permease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0002691
Physical Location & Seq
Forward (+)
62452562 .. 62473916
21355 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0510100.1

Sequence Viewer

Length: 7578 bp
ATGGAGGACAAAGAAACCGAAATCCTTTCCCGCCTGGCCGCAAACCACCTCTTCCTCGGCCAATTCGAGCCCCTCCGAGCCATCCTCATCGCTCTCCGCGCCCGAAACCCCGCCCTCGCCCTCGCCGTCCTCCAGACCATAGTCGCCCACTCCGGTCGCTTCGACAATGTTCTATGGTCCCCGTCCTGCCCTTCCCCGGCGATCCTCGCTTACCTCTCCACCGTCGAGCTCTTGCAATTCGACGACGCCTCCTCCGCCTGGGGATTCGATCCCGAAACGCTGCGGTTGCGCGCCGAGTTTCTGCTGCTGGTTCAGAGCTTGATCGATAGGGTTTCGGAGAGCCTGCGGAGGAGTTTCGATTTGGAGAGCATAGAGAAGGAGAAGGAGAAGAGTGATGGTTTCGAAGAGCGGGCGGAGTTGATGGATGATACGATGAGCAAGGAGTTGAGAGACGGCGGTGGTGAATTGGAGAGCTGTGTTAGGGTTTTGGATAGAGTGTTGGAGTTGGGGGTGAGTCGGTTGAAGCCGGAATCGTTGTTACTAGTAGGGAATGGTGATCAGGCTGTGGAAATTGAGGAAGGCGAGTTCATGTGCTTGAGGAGTGTGGTGTGGGAGTATGCTGATGTTTTCGATGCCTTGTGTTGGAATGTACAGAGGCAAGTGAGGGGTGGTTGGGAGGGAGATGATGCTTCGGGTTTGGCCATAACAGTGAGGAGGGATGATATGCCGAAAGAGGAGGAAGTGAAGGTTCTTCGTTTCATACAGAGGAGTGTTCAGTTAGCTCACTTGGATGCTATGAGAGAGTGCATCAAGGATGGTGAAGTGGATGGGCTGGTTTCGCGGATTCGTTTTCTTCACCTTGATTATGGAGTGGAGGAGACTGAGTATCGCATTGCTTTGCAAGATCTCCTCAAGATGGTGTCATCAGGAAAGGAGGGATATGGAGATTCCTGGCGAGACATGCGAGAAATATTACTGCAGATTTATAGTGCAGCTCTTGCTTCAAACTCTGGGCATCTTGTTCAAATGATACAAGTTCTTCAGGATGAGTTACTCTCAAAAGAGATTGAGATATATAGATCTCTTGATAACAATCAAATTCCGCCACCTCTTGAACGTCTTCAAAGATATCTTGAAGAATTAAAACCTGGCACAGATGTAAATGATAAAACTTCTCCCTTCAATAGTGTAGTTGCATTTTGCATGAGAGACATGTACCATTATGCTCGTGTTTCTGGTTTACACCTGCTTGAATGTGTCATGGAGACAGCTTTGTCTGTGGTGAAGAGGGAGCAGCTTCAAGAAGCTAGCAATATTCTTTTATTGTTCCCCCGTCTTCAGCCCCTAGTAGCCGCCATGGGTTGGGATTTACTGTCTGGCAAAACTGCAGCACGAAGGAAATTAATGCAGCTGCTGTGGAAAACTAAGTCGCAGGTTTTACGGCTGGAAGAATCTTCCCTTTATAGTAACCAGTCAGATGAGATATCTTGCGTGGAATATCTTTGTGATTCTTTATGTTATCAACTCGATCTTGCCTCATTTGTGGCCTGTGTTAATTCTGGTCAATCATGGAATTCAAAATTATCACTGACATTGTCTGCAAAAGACCAAATAGCATACAATGGTGAAGATGCCCAGTTAGACCCTTTTGTTGAAAACTTCGTACTGGAAAGGCTTTCCGCTCAAAGTCCTCTTCGGGTACTGTTTGATGTTGTTCCAGGCATAAAATTTCAGGATGCTATTGAATTGATAAGCATGCAGCCAATTGCTTCAACTTTAGAAGCCTGGAAGAGGATGCAGGATATTGAACTTATGCACATGCGGTATGCTCTAGATTCAGCCGTTCTTGCACTTGGAGTGATGGAAAAGAGTATGACCGCTGAAAGTCATCAAGTTGCATTTTGCTATTTAAAAGACCTGCAGAACCATTTGGAGGCTGTAAATACTATCCCCCGCAAGATCATGATCGTGAATGTCATAATTTCGCTCTTGCATATGGATGATCAGTCTCTCAATTTGAATCATTGTGCCTCACCAGGGAGTTATTCTGAAGCACACTACACATGTGCTTCAGAACAGATCAATCTGACTACATGTGAAGGGGGAAATGAATTGGTTATATCTTTCACAGGCAAACTACTTGAGATATTACATCACTGTCTTCCTTCAACGATAGCGGACCGTGATCATGCTCTTAGTGATGGTATAAATAGGGGTGGAAGACAAGCAGTGGAGTGGAGAGTGTCAATTGCTAAACACTTTATTGAAGAGTGGGAATGGCGGTTGTCAATTTTGCAGCGTCTCCTTCCATTATCTGAACGTCAGTGGAAATGGAAGGAAGCATTGACGGTATTACGTGCTGCACCATCTAAGCTACTTAACCTTTGCATGCAAAGGGCAAAGTATGACATTGGGGAAGAAGCAGTGCACCGATTCTCATTGTCTGCAGAAGATAGAGCTACACTTGAATTAGCTGAATGGGTAGATAGTGCTGTCAGAAGACAGTCGGTAGAAGATGTAGTCTCTCGTGCTGCTGATGATGGAACTTCTACAGTACATGATCTGGATTTTTCATCATTACGCTCTCAATTAGGTCCTTTGGCTGCAATTCTTCTTTGTATTGATGTTGCTGCTACTTCAGCACGGTCTGCAAAGATGTCCCAGCAGCTTTTGGATCAGGCTCAAGTTATGCTGTCTGAGATATATCCAGGAGTTTCTCCAAAGATGGGCTCCACGTACTGGGATCAGATTCTTGAAGTGGGAGTTATTTCTGTTCTAAAAAGAATCCTCAAGCGTTTACATGAGTTCTTGGATCAGGATGATCCTCCAGCCCTTCAGGCCACTCTGTCTGGGGAGATTTTCATCTCCTCGCCAAAGGACTCCCATCGACTGGGACAACGGGAACGTGTTCTTGATATGCTACATCATATGATTGAAGATGCTCACAAAGGCAAGCGGCAGTTTCTCAGTGGTAAGCTCCATAATCTTGCAAGAGCTGTGGCTGATGAAGAATCAGAGCTCAATTTTTCTAAAGGAGAAGGCCCTTCTGTTGACCAAAAGGTTCTATCCGATTATGACAAGGATGGAGTTCTTGGACTGGGGTTAAGAGTTGCCAAACAGATACCTTCAAGTTCCACAATTGGAGAAACTAGTGTGCAGCCTGTTGTTTATGATGTAAAGGACAGTGGGAAGAGATTGTTTGGTCCATTAAGTACCAAACCCATGACATATCTTTCACAATTTATTCTTCACATTGCTGCAATTGGTGACATAGTTGATGGCACAGATACAACTCATGATTTCAACTTTTTCTCCCTGGTGTATGAGTGGCCCAAGGATCTTTTAACCCGTCTTGTCTTTGACCGGGGCAGCACTGATGCAGCTGGTAAGGTAGCTGAGATTATGTGTGCAGATTTTGTGCATGAAGTAATTTCAGCATGTGTACCTCCTGTTTATCCCCCACGATCTGGCCATGGATGGGCCTGTATTCCGGTCATTCCCACCTTCCCTAAGAGTGGTTCGGAAAATAAAGTATTGTCCCCATCTTTCAAAGAAGCTAAGCCTAATTGTTACTCGCGCTCTTCATCTTTGCCTGGAATCCCTCTGTACCCTTTGCAGTTAGATATAGTAAAACATTTGGTCAAACTATCCCCAGTGAGGGCAGTCCTGGCATGTGTATTTGGGAGTAGCATTTTGTACAATGGCAGTAATTCTTCTATATCGAGCTCCTTGGATGATGGACTTCTACAGGCACCAGATGTTGACCGGTTGTTTTATGAGTTTGCTCTTGATCAATCTGAGAGGTTCCCAACTTTAAACCGATGGATACAAATGCAAACTAACCTGCATCGAGTTTCGGAGTTTGCTGTAACGGTTAAGCAAACTGACGATGGTGGTGAGACTAGAGGTGAAGCAAGAGCTGCTATCAAGAGGCTTCGTGAGCTTGACAGTGATACTGAGTCAGAAGTTGATGACGTTGTTGGTAATAGTGTTTCAACAGCTTTACCAGACCTCGATAGCCAAGGTGGTACTGCTCTTGATTCATGGCGTGATTCTTCTAAACCAGATGTTGCTGAGTTTGACACTTCAGTTTTCCTTTCTTTTGATTGGGAAAATGAAGAACCTTATGAGAAAGCTGTACAAAGATTGATAGATGATGAAAAACTTATGGATGCTCTTGCTCTTTCCGATCGCTTTCTACGCAATGGAGCTTCAGATCAACTACTTCAGCTACTCATTGAACATGGGGAAGAGAACCAGTCAGTCTCTGGACACTCTCAGGGTTATGGTGGCAATAGCATTTGGAGCACTAGTTGGCAGTATTGCCTGCGGTTGAAGGATAAACAAGTGGCTGCCAGACTTGCTCTCAAGTGTATGCATAGATGGGAACTGGATGCTGCTTTAGACGTACTCACCATGTGCAGCTGCCACCTGCCTCAAAGTGACCCCATTAGGGAGGAGGTCATGTATAGGAGACAAGCTTTGCAGAGGTACAGCCACATTCTAAGTGCAGATGACCATTATAGCAGCTGGCAAGAGGTTGAGGCAGAGTGTAAGGAAGATCCTGAGGGGTTGGCACTTAGATTAGCTGGAAAAGGAGCTGTTTCTGCTGCCTTAGAAGTGGCTGAAAGCGCGGGGTTATCCATTGATTTGCGTAGGGAACTGCAGGGCCGGCAACTTGTGAAGCTTTTGACTGCAGATCCTCTCAATGGGGGAGGTCCAGCAGAAGCTTCACGATTTCTTTCTTCATTGCGCGACTCAGATGATGCTCTACCTGTTGCCATGGGTGCGATGCAGCTTTTACCTGATTTGCGGTCAAAGCAGCTTCTTGTTCATTTCTTCCTGAAGCGGAGAGAAGGGAATCTTTCAGATGTTGAGGTTTCTCGGCTTAATTCATGGGCCTTGGGGCTTCGTGTTCTGGCTGCCTTGCCATTGCCATGGCAGCAAAGATGTTCTTCCTTGCATGAGCACCCTCATTTGATACTTGAGGTTCTTCTGATGAGGAAACAACTACAATCTGCTGCTTTGATTCTCAAAGAATTTCCTTTGTTGAGAGACAATAATGCACTTATTGCCTATGCTACTAAAGCTATTGCAATCAGTATTAGCTCTCCCCCTAGAGAACATCGAGTATCTGTTTCGGGGACAAGATTAAAGCAGAAAACAAGAACAGGTGCACCTGTGAAGTCTTCTTTCACTAGCAGTCTCAGTAACTTGCAAAAAGAAGCTCGCAGAGCCTTCTCTTGGGCTCCACGAAATAGTGGAGACAGGTCCACCCCGAAAGATGGTTACCGTAAGAGAAAGAGTTCTGGATTGACACCCTCTGAAAAAGTAGCTTGGGAGGCCATGGCTGGAATCCAGGAGGATCGTGCTTCAACATATTCTGTTGATGGGCAAGAACGGCTTCCTTCAATTTCAATATCTGAAGAATGGATGCTAACTGGTGATCCATTGAAGGATGAAGCCGTTCGTGCATCTCACCGATACGAGAGTGCTCCTGACATAACGCTTTTCAAGGCACTGCTTTCTCTATGCTCAGATGATTCTGTGTCTGCAAAAACTGCATTGGATTTGTGCGTAACTCAGATGAAGAATGTACTGAGTTCCCAACAATTGCCAGAGAATGCTTCTGTGGAAACCATTGGCCGAGCATATCATGCCACAGAGACGTTTGTACAGGGGCTACTTTATGCTAAATCACTGTTGAGAAAGCTTGTGGGCGGCAGTGATTTGTCGAGTAATTCTGAAAGAAGTAGGGATGCTGATGATGCATCTTCTGATGCTGGTAGCTCTAGTGTGGGTAGTCAGTCCACAGATGAGCTATCTGAAGTTCTGTTGCAGGCAGACACTTGGCTAGGACGTGCTGAGCTGCTTCAGAGCCTTCTGGGATCAGGAATTGCTGCTTCTCTAGATGATATTGCGGATAAAGAGTCATCTGCCTCTCTTCGTGATAGGCTGATTGTGGAAGAACGGTACAGCATGGCCGTATATACATGTAAAAAGTGCAAGATTGATGTGGTTCCTGTTTGGAATGCATGGGGACATGCTTTGATTCGGATGGAGCACTATGCACAAGCTCGCGTGAAGTTCAAGCAAGCTCTTCAGCTGTACAAAGGTGATCCTGCTCCTGTTATTCTTGAGATAATCAATACAATTGAAGGAGGTCCGCCAGTTGATGTTTCAGCTGTTCGTTCCATGTATGAACATTTGGCTAAAAGTGCACCAACAATCTTGGATGATTCTCTTTCTGCTGATTCATATCTCAATGTGTTATACATGCCATCCACATTTCCTCGTTCAGAGAGATCCAGGCGTTCTCAGGAATCTGCAAATAACAGCTCCGCATATATGTCAGACTTTGAAGATGGACCACGCAGCAACTTAGACAGTGTTCGGTATGTTGAGTGTGTCAACTATTTACAAGAATATGCCAGGCAACATTTGCTCAATTTCATGTTCAGGCATGGCCACTATAATGACGCTTGCATGTTGTTCTTTCCTCAAAATGCTGTTCCCCCTCCTCCTCAGCCATCAGTAGCAGGGGTGGCATCCTCATCTTCATCCCCTCAAAGACCAGATCCTCTAGGAACTGATTATGGGACCATTGATGATTTGTGTGATTTATGTGTTGGTTATGGCGCAATGCATGTTTTAGAAGAAGTGATCTCAGTAAGAATGTCATCTACAACCCCACAAGATGTGGCAGTGATCCAGCATACAGCTGCAGCCCTTGCTCGTATTTGTGTCTACTGTGAAACACATAGGCATTTCAATTATTTATACAAGTTTCAGGTTATTAAAAAGGACCATGTCGCTGCTGGACTGTGCTGCATCCAACTTTTTATGAACTCTTCTTTGCAAGAGGAAGCTATAAAACATTTGGAAAATTCCAAGATGCACTTTGATGAAGCGCTATCAGCACGGTACAAAGGTGGGGATTCTACTAAGCTTGTGACGAAGGGTGTTAGAGGAAAAAGTGCCTCTGAAAAGCTCACTGAAGAAGGACTTGTCAAGTTTTCTGCTCGGGTATCAATTCAGGTTGAAGTTGTTAGATCCTATAATGATTCAGATGGACCCCATTGGAAACATTCACTTTTCGGAAACCCAAATGACTCCGAAACATTCAGGAGAAGGTGTAAAATTGCTGAATCTCTTGTGGAAAAGAACTTCGATTTGGCATTCCAAGTGATTTATGAATTCACCCTTCCAGCTGTGGATATATATGCTGGTGTAGCTGCATCACTTGCTGAGAGAAAAAAAGGTAGTCAGCTGACAGAATTTTTTAGAAACATTAAAGGGACCATTGATGACGATGATTGGGACCAGGTCTTGGGAGCTGCAATTAATGTATATGCTAACAAACACAAAGAACGCCCTGACCGTCTTATAGACATGTTGACCAGTAGCCACAGGAAGGTTCTGGCTTGTGTGGTTTGTGGACGTCTAAAAAGTGCATTCCAAATTGCTTCTCGTAGCGGAAGTGTAGCTGATGTCCAATATGTAGCTCATCAGGCATTGCATGCGAATGCGCTTCCTGTACTCGATATGTGTAAACAATGGTTGGCTCAGTATATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005215 GO:0005345 GO:0006810 GO:0006863 GO:0008150 GO:0015205 GO:0015851 GO:0015853 GO:0015854 GO:0022857 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0072530 GO:1904823
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Xan_ur_permease

Protein Analysis

2525

Amino Acids

281.49

Weight (kDa)

5.41

Isoelectric Point (pI)

51.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_ZFYVE26 PF25569 2403 - 2522 2.4e-32 ZFYVE26-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1254, 4440
AasI GACNNNNNNGTC 1 cut(s) 1273
AatII GACGTC 1 cut(s) 7444
Acc36I ACCTGC 5 cut(s) 1254, 1423, 1926, 3852, 4440
AccB1I GGYRCC 1 cut(s) 3751
AccB7I CCANNNNNTGG 5 cut(s) 1362, 2739, 2890, 3467, 7330
AccBSI CCGCTC 2 cut(s) 409, 1682
AccI GTMKAC 1 cut(s) 6747
AccII CGCG 7 cut(s) 99, 291, 841, 3577, 4634, 4755, 6081
AcoI YGGCCR 7 cut(s) 36, 58, 699, 3469, 5644, 5982, 6466
AcsI RAATTY 7 cut(s) 1098, 1573, 1727, 5039, 6886, 7196, 7277
AcyI GRCGYC 2 cut(s) 246, 7441
AdeI CACNNNGTG 1 cut(s) 4419
AfeI AGCGCT 1 cut(s) 6912
AflIII ACRYGT 6 cut(s) 1212, 2063, 2093, 2905, 5993, 7392
AgeI ACCGGT 1 cut(s) 3765
AhlI ACTAGT 3 cut(s) 541, 3149, 4310
AjiI CACGTC 1 cut(s) 5861
AjuI GAANNNNNNNTTGG 2 cut(s) 7157, 7189
AloI GAACNNNNNNTCC 2 cut(s) 569, 601
Alw44I GTGCAC 3 cut(s) 2426, 5175, 6219
AlwNI CAGNNNCTG 2 cut(s) 1414, 4268
Ama87I CYCGRG 1 cut(s) 7023
Aor51HI AGCGCT 1 cut(s) 6912
ApaLI GTGCAC 3 cut(s) 2426, 5175, 6219
ApoI RAATTY 7 cut(s) 1098, 1573, 1727, 5039, 6886, 7196, 7277
AseI ATTAAT 2 cut(s) 1403, 7344
AsiGI ACCGGT 1 cut(s) 3765
Asp700I GAANNNNTTC 5 cut(s) 1119, 2907, 5305, 5403, 5466
AspLEI GCGC 9 cut(s) 101, 291, 293, 3579, 4634, 4755, 6641, 6913, 7531
AsuC2I CCSGG 2 cut(s) 197, 3365
AsuII TTCGAA 1 cut(s) 402
AsuNHI GCTAGC 1 cut(s) 1307
AvaI CYCGRG 1 cut(s) 7023
AxyI CCTNAGG 1 cut(s) 4566
BaeGI GKGCMC 3 cut(s) 2430, 5179, 6223
BaeI ACNNNNGTAYC 4 cut(s) 5476, 5509, 6916, 6949
BalI TGGCCA 3 cut(s) 701, 3471, 6468
BanI GGYRCC 1 cut(s) 3751
BanII GRGCYC 6 cut(s) 72, 231, 2732, 3021, 3728, 5251
BauI CACGAG 2 cut(s) 1227, 2526
BbsI GAAGAC 6 cut(s) 1112, 1328, 2153, 2227, 2506, 5181
BbvCI CCTCAGC 1 cut(s) 6525
BceAI ACGGC 7 cut(s) 110, 469, 1457, 1826, 5417, 5450, 5969
BciVI GTATCC 1 cut(s) 3819
BclI TGATCA 4 cut(s) 556, 2002, 2185, 3790
BcnI CCSGG 2 cut(s) 197, 3365
BcuI ACTAGT 3 cut(s) 541, 3149, 4310
BfmI CTRYAG 9 cut(s) 977, 1386, 1919, 2445, 2550, 3746, 4664, 4695, 6723
BfoI RGCGCY 1 cut(s) 6914
BfuAI ACCTGC 5 cut(s) 1254, 1423, 1926, 3852, 4440
BfuI GTATCC 1 cut(s) 3819
BglI GCCNNNNNGGC 1 cut(s) 2837
BglII AGATCT 2 cut(s) 904, 1079
BlpI GCTNAGC 2 cut(s) 3558, 5865
BmeT110I CYCGRG 1 cut(s) 7023
BmgBI CACGTC 1 cut(s) 5861
BmrI ACTGGG 5 cut(s) 1630, 2749, 2900, 3107, 3647
BmtI GCTAGC 1 cut(s) 1311
BmuI ACTGGG 5 cut(s) 1630, 2749, 2900, 3107, 3647
BoxI GACNNNNGTC 1 cut(s) 140
BpiI GAAGAC 6 cut(s) 1112, 1328, 2153, 2227, 2506, 5181
BplI GAGNNNNNCTC 4 cut(s) 69, 101, 1040, 1072
BpmI CTGGAG 2 cut(s) 116, 2811
Bpu10I CCTNAGC 1 cut(s) 6525
Bpu1102I GCTNAGC 2 cut(s) 3558, 5865
Bpu14I TTCGAA 1 cut(s) 402
BpuEI CTTGAG 8 cut(s) 616, 896, 2162, 2667, 2774, 4352, 5006, 6158
BpuMI CCSGG 2 cut(s) 197, 3365
Bsa29I ATCGAT 1 cut(s) 324
BsaAI YACGTR 2 cut(s) 2357, 2736
BsaBI GATNNNNATC 4 cut(s) 1092, 1964, 2861, 6258
BsaHI GRCGYC 2 cut(s) 246, 7441
BsaWI WCCGGW 3 cut(s) 152, 3490, 3765
Bse118I RCCGGY 2 cut(s) 3765, 4671
Bse21I CCTNAGG 1 cut(s) 4566
Bse3DI GCAATG 7 cut(s) 891, 3252, 4210, 4748, 4931, 6648, 7514
Bse8I GATNNNNATC 4 cut(s) 1092, 1964, 2861, 6258
BseCI ATCGAT 1 cut(s) 324
BseJI GATNNNNATC 4 cut(s) 1092, 1964, 2861, 6258
BseMI GCAATG 7 cut(s) 891, 3252, 4210, 4748, 4931, 6648, 7514
BsePI GCGCGC 1 cut(s) 289
BseSI GKGCMC 3 cut(s) 2430, 5179, 6223
BseYI CCCAGC 1 cut(s) 2661
BsgI GTGCAG 6 cut(s) 1011, 2346, 3176, 3429, 4441, 4530
Bsh1236I CGCG 7 cut(s) 99, 291, 841, 3577, 4634, 4755, 6081
Bsh1285I CGRYCG 2 cut(s) 157, 4192
BshNI GGYRCC 1 cut(s) 3751
BshTI ACCGGT 1 cut(s) 3765
BshVI ATCGAT 1 cut(s) 324
BsiEI CGRYCG 2 cut(s) 157, 4192
BsiHKCI CYCGRG 1 cut(s) 7023
BsiSI CCGG 7 cut(s) 153, 197, 527, 3364, 3491, 3766, 4672
BslFI GGGAC 9 cut(s) 163, 2644, 2907, 3523, 5158, 6054, 6613, 7312, 7334
BsmBI CGTCTC 3 cut(s) 444, 2306, 5660
BsmFI GGGAC 9 cut(s) 163, 2644, 2907, 3523, 5158, 6054, 6613, 7312, 7334
BsmI GAATGC 5 cut(s) 5629, 6037, 7178, 7454, 7531
BsoBI CYCGRG 1 cut(s) 7023
Bsp119I TTCGAA 1 cut(s) 402
Bsp1407I TGTACA 5 cut(s) 649, 3696, 4138, 5674, 6108
Bsp1720I GCTNAGC 2 cut(s) 3558, 5865
Bsp19I CCATGG 5 cut(s) 1356, 3472, 4782, 4937, 5346
BspDI ATCGAT 1 cut(s) 324
BspFNI CGCG 7 cut(s) 99, 291, 841, 3577, 4634, 4755, 6081
BspHI TCATGA 2 cut(s) 1962, 3295
BspMAI CTGCAG 7 cut(s) 981, 1390, 1923, 2449, 4668, 4699, 6727
BspMI ACCTGC 5 cut(s) 1254, 1423, 1926, 3852, 4440
BspOI GCTAGC 1 cut(s) 1311
BspQI GCTCTTC 3 cut(s) 399, 3586, 6105
BspT104I TTCGAA 1 cut(s) 402
BspT107I GGYRCC 1 cut(s) 3751
BsrBI CCGCTC 2 cut(s) 409, 1682
BsrDI GCAATG 7 cut(s) 891, 3252, 4210, 4748, 4931, 6648, 7514
BsrFI RCCGGY 2 cut(s) 3765, 4671
BsrGI TGTACA 5 cut(s) 649, 3696, 4138, 5674, 6108
BssAI RCCGGY 2 cut(s) 3765, 4671
BssHII GCGCGC 1 cut(s) 289
BssNI GRCGYC 2 cut(s) 246, 7441
BssSI CACGAG 2 cut(s) 1227, 2526
BssT1I CCWWGG 9 cut(s) 1356, 3333, 3472, 3729, 4021, 4782, 4902, 4937, 5346
Bst2BI CACGAG 2 cut(s) 1227, 2526
BstACI GRCGYC 2 cut(s) 246, 7441
BstAUI TGTACA 5 cut(s) 649, 3696, 4138, 5674, 6108
BstBAI YACGTR 2 cut(s) 2357, 2736
BstBI TTCGAA 1 cut(s) 402
BstDSI CCRYGG 5 cut(s) 1356, 3472, 4782, 4937, 5346
BstEII GGTNACC 1 cut(s) 5288
BstENI CCTNNNNNAGG 1 cut(s) 1789
BstFNI CGCG 7 cut(s) 99, 291, 841, 3577, 4634, 4755, 6081
BstH2I RGCGCY 1 cut(s) 6914
BstHHI GCGC 9 cut(s) 101, 291, 293, 3579, 4634, 4755, 6641, 6913, 7531
BstMCI CGRYCG 2 cut(s) 157, 4192
BstPAI GACNNNNGTC 1 cut(s) 140
BstPI GGTNACC 1 cut(s) 5288
BstSFI CTRYAG 9 cut(s) 977, 1386, 1919, 2445, 2550, 3746, 4664, 4695, 6723
BstSLI GKGCMC 3 cut(s) 2430, 5179, 6223
BstUI CGCG 7 cut(s) 99, 291, 841, 3577, 4634, 4755, 6081
BstV2I GAAGAC 6 cut(s) 1112, 1328, 2153, 2227, 2506, 5181
BstX2I RGATCY 8 cut(s) 904, 1079, 3337, 4561, 4699, 6305, 6577, 7052
BstXI CCANNNNNNTGG 1 cut(s) 4938
BstYI RGATCY 8 cut(s) 904, 1079, 3337, 4561, 4699, 6305, 6577, 7052
Bsu15I ATCGAT 1 cut(s) 324
Bsu36I CCTNAGG 1 cut(s) 4566
BsuI GTATCC 1 cut(s) 3819
BsuTUI ATCGAT 1 cut(s) 324
BtgI CCRYGG 5 cut(s) 1356, 3472, 4782, 4937, 5346
BtgZI GCGATG 2 cut(s) 73, 4805
BtrI CACGTC 1 cut(s) 5861
BtsI GCAGTG 5 cut(s) 2235, 2430, 5519, 5731, 6711
BveI ACCTGC 5 cut(s) 1254, 1423, 1926, 3852, 4440
CaiI CAGNNNCTG 2 cut(s) 1414, 4268
CciI TCATGA 2 cut(s) 1962, 3295
CfoI GCGC 9 cut(s) 101, 291, 293, 3579, 4634, 4755, 6641, 6913, 7531
Cfr10I RCCGGY 2 cut(s) 3765, 4671
ClaI ATCGAT 1 cut(s) 324
CpoI CGGWCCG 1 cut(s) 2179
CseI GACGC 3 cut(s) 254, 2288, 6488
CsiI ACCWGGT 1 cut(s) 7323
CspAI ACCGGT 1 cut(s) 3765
CspCI CAANNNNNGTGG 2 cut(s) 2979, 3014
CspI CGGWCCG 1 cut(s) 2179
DraI TTTAAA 2 cut(s) 1911, 3816
DraIII CACNNNGTG 1 cut(s) 4419
DrdI GACNNNNNNGTC 1 cut(s) 1273
DseDI GACNNNNNNGTC 1 cut(s) 1273
EaeI YGGCCR 7 cut(s) 36, 58, 699, 3469, 5644, 5982, 6466
EciI GGCGGA 4 cut(s) 244, 428, 1092, 6156
Ecl136II GAGCTC 3 cut(s) 229, 3019, 3726
Eco130I CCWWGG 9 cut(s) 1356, 3333, 3472, 3729, 4021, 4782, 4902, 4937, 5346
Eco24I GRGCYC 6 cut(s) 72, 231, 2732, 3021, 3728, 5251
Eco32I GATATC 2 cut(s) 1130, 1485
Eco47III AGCGCT 1 cut(s) 6912
Eco53kI GAGCTC 3 cut(s) 229, 3019, 3726
Eco81I CCTNAGG 1 cut(s) 4566
Eco88I CYCGRG 1 cut(s) 7023
Eco91I GGTNACC 1 cut(s) 5288
EcoICRI GAGCTC 3 cut(s) 229, 3019, 3726
EcoNI CCTNNNNNAGG 1 cut(s) 1789
EcoO109I RGGNCCY 2 cut(s) 2594, 3041
EcoO65I GGTNACC 1 cut(s) 5288
EcoRI GAATTC 2 cut(s) 1573, 7196
EcoRV GATATC 2 cut(s) 1130, 1485
EcoT14I CCWWGG 9 cut(s) 1356, 3333, 3472, 3729, 4021, 4782, 4902, 4937, 5346
EcoT22I ATGCAT 4 cut(s) 4380, 5773, 6037, 6648
EcoT38I GRGCYC 6 cut(s) 72, 231, 2732, 3021, 3728, 5251
ErhI CCWWGG 9 cut(s) 1356, 3333, 3472, 3729, 4021, 4782, 4902, 4937, 5346
Esp3I CGTCTC 3 cut(s) 444, 2306, 5660
FaqI GGGAC 9 cut(s) 163, 2644, 2907, 3523, 5158, 6054, 6613, 7312, 7334
FauI CCCGC 5 cut(s) 38, 118, 402, 1961, 4627
FauNDI CATATG 2 cut(s) 1995, 2928
FbaI TGATCA 4 cut(s) 556, 2002, 2185, 3790
FblI GTMKAC 1 cut(s) 6747
FriOI GRGCYC 6 cut(s) 72, 231, 2732, 3021, 3728, 5251
GlaI GCGC 9 cut(s) 100, 290, 292, 3578, 4633, 4754, 6640, 6912, 7530
GsaI CCCAGC 1 cut(s) 2665
GsuI CTGGAG 2 cut(s) 116, 2811
HaeII RGCGCY 1 cut(s) 6914
HapII CCGG 7 cut(s) 153, 197, 527, 3364, 3491, 3766, 4672
HgaI GACGC 3 cut(s) 254, 2288, 6488
HhaI GCGC 9 cut(s) 101, 291, 293, 3579, 4634, 4755, 6641, 6913, 7531
Hin1I GRCGYC 2 cut(s) 246, 7441
Hin6I GCGC 9 cut(s) 99, 289, 291, 3577, 4632, 4753, 6639, 6911, 7529
HinP1I GCGC 9 cut(s) 99, 289, 291, 3577, 4632, 4753, 6639, 6911, 7529
HincII GTYRAC 4 cut(s) 3052, 3763, 6412, 7398
HindII GTYRAC 4 cut(s) 3052, 3763, 6412, 7398
HindIII AAGCTT 5 cut(s) 4479, 4685, 4728, 5711, 6947
HpaII CCGG 7 cut(s) 153, 197, 527, 3364, 3491, 3766, 4672
Hpy99I CGWCG 3 cut(s) 227, 245, 248
Hsp92I GRCGYC 2 cut(s) 246, 7441
HspAI GCGC 9 cut(s) 99, 289, 291, 3577, 4632, 4753, 6639, 6911, 7529
KroI GCCGGC 1 cut(s) 4671
KroNI GCCGGC 1 cut(s) 4673
Ksp22I TGATCA 4 cut(s) 556, 2002, 2185, 3790
LguI GCTCTTC 3 cut(s) 399, 3586, 6105
MabI ACCWGGT 1 cut(s) 7323
MbiI CCGCTC 2 cut(s) 409, 1682
MfeI CAATTG 6 cut(s) 1764, 2247, 3138, 3261, 5612, 6153
MflI RGATCY 8 cut(s) 904, 1079, 3337, 4561, 4699, 6305, 6577, 7052
MlsI TGGCCA 3 cut(s) 701, 3471, 6468
MluNI TGGCCA 3 cut(s) 701, 3471, 6468
MlyI GAGTC 6 cut(s) 523, 2873, 3968, 4751, 5939, 7106
MmeI TCCRAC 3 cut(s) 480, 623, 6859
Mox20I TGGCCA 3 cut(s) 701, 3471, 6468
Mph1103I ATGCAT 4 cut(s) 4380, 5773, 6037, 6648
MroNI GCCGGC 1 cut(s) 4671
MroXI GAANNNNTTC 5 cut(s) 1119, 2907, 5305, 5403, 5466
MscI TGGCCA 3 cut(s) 701, 3471, 6468
MslI CAYNNNNRTG 8 cut(s) 707, 789, 1967, 1998, 4936, 6474, 6903, 7524
Msp20I TGGCCA 3 cut(s) 701, 3471, 6468
MspI CCGG 7 cut(s) 153, 197, 527, 3364, 3491, 3766, 4672
MunI CAATTG 6 cut(s) 1764, 2247, 3138, 3261, 5612, 6153
Mva1269I GAATGC 5 cut(s) 5629, 6037, 7178, 7454, 7531
MvnI CGCG 7 cut(s) 99, 291, 841, 3577, 4634, 4755, 6081
NaeI GCCGGC 1 cut(s) 4673
NciI CCSGG 2 cut(s) 197, 3365
NcoI CCATGG 5 cut(s) 1356, 3472, 4782, 4937, 5346
NdeI CATATG 2 cut(s) 1995, 2928
NgoMIV GCCGGC 1 cut(s) 4671
NheI GCTAGC 1 cut(s) 1307
NmeAIII GCCGAG 4 cut(s) 36, 319, 4864, 5672
NmuCI GTSAC 3 cut(s) 3266, 4442, 6952
NsiI ATGCAT 4 cut(s) 4380, 5773, 6037, 6648
NspV TTCGAA 1 cut(s) 402
PaeI GCATGC 3 cut(s) 1759, 2392, 7523
PagI TCATGA 2 cut(s) 1962, 3295
PaqCI CACCTGC 2 cut(s) 1254, 4440
PauI GCGCGC 1 cut(s) 289
PciI ACATGT 5 cut(s) 1212, 2063, 2093, 5993, 7392
PciSI GCTCTTC 3 cut(s) 399, 3586, 6105
PcsI WCGNNNNNNNCGW 3 cut(s) 63, 123, 7378
PctI GAATGC 5 cut(s) 5629, 6037, 7178, 7454, 7531
PdiI GCCGGC 1 cut(s) 4673
PdmI GAANNNNTTC 5 cut(s) 1119, 2907, 5305, 5403, 5466
PflFI GACNNNGTC 3 cut(s) 1594, 6809, 7325
PflMI CCANNNNNTGG 5 cut(s) 1362, 2739, 2890, 3467, 7330
PfoI TCCNGGA 2 cut(s) 2707, 5358
PinAI ACCGGT 1 cut(s) 3765
Ple19I CGATCG 1 cut(s) 4192
PleI GAGTC 6 cut(s) 522, 2873, 3967, 4751, 5938, 7106
PpsI GAGTC 6 cut(s) 522, 2873, 3967, 4751, 5938, 7106
Ppu21I YACGTR 2 cut(s) 2357, 2736
PpuMI RGGWCCY 1 cut(s) 2594
PscI ACATGT 5 cut(s) 1212, 2063, 2093, 5993, 7392
PshAI GACNNNNGTC 1 cut(s) 140
PshBI ATTAAT 2 cut(s) 1403, 7344
Psp124BI GAGCTC 3 cut(s) 231, 3021, 3728
Psp5II RGGWCCY 1 cut(s) 2594
PspEI GGTNACC 1 cut(s) 5288
PspFI CCCAGC 1 cut(s) 2661
PspPPI RGGWCCY 1 cut(s) 2594
PstI CTGCAG 7 cut(s) 981, 1390, 1923, 2449, 4668, 4699, 6727
PstNI CAGNNNCTG 2 cut(s) 1414, 4268
PsuI RGATCY 8 cut(s) 904, 1079, 3337, 4561, 4699, 6305, 6577, 7052
PsyI GACNNNGTC 3 cut(s) 1594, 6809, 7325
PteI GCGCGC 1 cut(s) 289
PvuI CGATCG 1 cut(s) 4192
PvuII CAGCTG 9 cut(s) 1411, 3383, 4425, 4530, 6106, 6185, 6722, 7211, 7270
RseI CAYNNNNRTG 8 cut(s) 707, 789, 1967, 1998, 4936, 6474, 6903, 7524
Rsr2I CGGWCCG 1 cut(s) 2179
RsrII CGGWCCG 1 cut(s) 2179
SacI GAGCTC 3 cut(s) 231, 3021, 3728
SapI GCTCTTC 3 cut(s) 399, 3586, 6105
SchI GAGTC 6 cut(s) 523, 2873, 3968, 4751, 5939, 7106
SexAI ACCWGGT 1 cut(s) 7323
SfcI CTRYAG 9 cut(s) 977, 1386, 1919, 2445, 2550, 3746, 4664, 4695, 6723
SfuI TTCGAA 1 cut(s) 402
SmiMI CAYNNNNRTG 8 cut(s) 707, 789, 1967, 1998, 4936, 6474, 6903, 7524
SmlI CTYRAG 8 cut(s) 595, 911, 2141, 2682, 2789, 4367, 4985, 6137
SmoI CTYRAG 8 cut(s) 595, 911, 2141, 2682, 2789, 4367, 4985, 6137
SpeI ACTAGT 3 cut(s) 541, 3149, 4310
SphI GCATGC 3 cut(s) 1759, 2392, 7523
SspI AATATT 2 cut(s) 972, 1315
SstI GAGCTC 3 cut(s) 231, 3021, 3728
StyI CCWWGG 9 cut(s) 1356, 3333, 3472, 3729, 4021, 4782, 4902, 4937, 5346
TatI WGTACW 8 cut(s) 649, 2554, 3696, 4138, 5596, 5674, 6108, 7537
TauI GCSGC 4 cut(s) 41, 1355, 2959, 5724
TseFI GTSAC 3 cut(s) 3266, 4442, 6952
Tsp45I GTSAC 3 cut(s) 3266, 4442, 6952
Tth111I GACNNNGTC 3 cut(s) 1594, 6809, 7325
Van91I CCANNNNNTGG 5 cut(s) 1362, 2739, 2890, 3467, 7330
VneI GTGCAC 3 cut(s) 2426, 5175, 6219
VspI ATTAAT 2 cut(s) 1403, 7344
XagI CCTNNNNNAGG 1 cut(s) 1789
XapI RAATTY 7 cut(s) 1098, 1573, 1727, 5039, 6886, 7196, 7277
XbaI TCTAGA 2 cut(s) 1831, 5908
XcmI CCANNNNNNNNNTGG 2 cut(s) 4265, 6815
XmiI GTMKAC 1 cut(s) 6747
XmnI GAANNNNTTC 5 cut(s) 1119, 2907, 5305, 5403, 5466
ZraI GACGTC 1 cut(s) 7442
Zsp2I ATGCAT 4 cut(s) 4380, 5773, 6037, 6648
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.