Rmu_sc0008676.1_g000008

Ferrous iron transport protein B

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008676.1
Physical Location & Seq
Reverse (-)
31415 .. 35829
4415 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008676.1_g000008.1.cds

Sequence Viewer

Length: 2124 bp
atgtctgcagaggaaaaattaaggtttaagttcaataagaaactcaaaatagcagttggaaattctaagttttcaaatagtgggagaaagaaggctgaagataatgtcaatgagagtgagaatggtaagagagagaactataaatcgagtgtaagagataagaagtttcatgatgctgaagaagggagtcggggagtctttgatagaaggaagagaatctatgttgatcgagatgcagcttgggaggctaacagtaatgaggaggcaccttataggaaggttttatctaaaaaaggacagaatcaattgaagtatggttatattaatgagaagaactacagtagatctccttcacgtcctcgttacaagtggggttctaatgagagtgcttctgaaactaaacggttttctcccaaggagagaagtgcaaaagtttataataacttcggcaatgaaaagaataatagtagatttccttcttgtccccgttcgaagtgggattctgatggattagagaatgcttctgaaactaaacgtttttctcccaaggttagaagtgcaaaagtttacaatgaaacaaaagttaaggacgctgatcattttggtaatgaaaagagtggcagcagatttccttcgcgtcctcgctctacatggtgttctgatatcactgcttctgaaactaaacgtttttctcctaaggttagaagtgagaaacgttccaataaaaccaaagttaaggatgttgataagatggaatctattacaactgatggtggacggagtgcttcactgaagaaacataaccaaataaaaccagacttgcaaaaatccccaaatatatctcttccaaatactgtgaagaaaaaagcatgggaaaagaatatctcggatgaaggatcagatgtgctagatggtcagcgaaagaagaagcgaatgcgaccagatccatatgacatttcaaataaacgacttgatgatagtattgctaaaattgaaaacttaaaggagaaggaaaaagatgttgaggaaaaagctgagatatcaaagaatgcacaatttcgtgcaatccaaccaagtccatcaatcctttcctatgtcgaagataatttgttgggtcgtagacgcttgattgagctgagtagggcaggctacaacactgagctttctgcaccattggataatactcctttctctaccagctcagaaagagagcggattgaggaaaatatatttaggagtaaattgacattttttgctgctgcaaaagtttcatcatcatttccacctcctgatcttccggagattgcatttgcaggaaggtcaaatgttgggaaatcatcactacttaatgcacttaccagaaattggggtgttgcacgaacatcagataagcctggtcttactcagagtattaatttcttcaatcttggatcaaagctctgtttggttgatttgcctggatatggctttgcttatgctaaagaagaggttaaggatgcttgggaggagcttgtgaaggagtatgtttccacaagagttggtctaaaacgagtgtgcttacttattgatacgaaatggggaatgaagcctagggatcgtgaactcattgacctgatggaaaggtacaaattacatgcagacattcttggaaaaagtgttaagtttgatgagtgtgggtattaccttattagtggcactgtatctcaaaccaagtatcagattttattaacgaaatcggatgcggtattcccgattgatgtagcacgccgtgcaatgcaaattgaagagagcctcaaggcaaataagtctgtggtccaacctgtggtatgccctctattatttgatctgctgatagtgcacactgaaattatagggcttgtgctcgagttttatgactttcattgcttgatttacagatctcaaaccaagtatcagattttattaacgaaatcggatgcggttttcccgattgatgtagcacgccgtgcaatgcaaattgaagagagcttcaaggcaaataagtctgtggtccaacctgtgatgatgatgagctcgagaactggagctggtatacgaagtttacgaacagtgctggcaaaaattgctcgagttgccaaagtttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

707

Amino Acids

80.53

Weight (kDa)

9.7

Isoelectric Point (pI)

54.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 438
AccB1I GGYRCC 1 cut(s) 265
AccB7I CCANNNNNTGG 2 cut(s) 1365, 1822
AccBSI CCGCTC 1 cut(s) 1213
AccI GTMKAC 2 cut(s) 1120, 2071
AccII CGCG 1 cut(s) 637
AccIII TCCGGA 1 cut(s) 1297
AciI CCGC 3 cut(s) 1213, 1742, 1958
AclI AACGTT 3 cut(s) 535, 685, 715
AclWI GGATC 4 cut(s) 904, 938, 1438, 1602
AcsI RAATTY 1 cut(s) 61
AcuI CTGAAG 3 cut(s) 117, 198, 812
AdeI CACNNNGTG 2 cut(s) 1769, 1985
AfaI GTAC 1 cut(s) 1625
AfiI CCNNNNNNNGG 3 cut(s) 1365, 1463, 1822
AgsI TTSAA 9 cut(s) 34, 75, 310, 960, 995, 1423, 1784, 2000, 2011
AjiI CACGTC 1 cut(s) 356
AjnI CCWGG 2 cut(s) 1393, 1456
Alw21I GWGCWC 3 cut(s) 1860, 1884, 2054
Alw44I GTGCAC 1 cut(s) 1856
AlwI GGATC 4 cut(s) 904, 938, 1438, 1602
Ama87I CYCGRG 3 cut(s) 1883, 2053, 2106
Aor13HI TCCGGA 1 cut(s) 1297
ApaLI GTGCAC 1 cut(s) 1856
ApeKI GCWGC 4 cut(s) 236, 621, 1256, 1259
ApoI RAATTY 1 cut(s) 61
AseI ATTAAT 2 cut(s) 324, 1413
AspA2I CCTAGG 1 cut(s) 1589
AspS9I GGNCC 2 cut(s) 1813, 2029
AsuII TTCGAA 1 cut(s) 491
AvaI CYCGRG 3 cut(s) 1883, 2053, 2106
AvaII GGWCC 2 cut(s) 1813, 2029
AvrII CCTAGG 1 cut(s) 1589
AxyI CCTNAGG 1 cut(s) 696
BaeGI GKGCMC 1 cut(s) 1860
BanI GGYRCC 1 cut(s) 265
BanII GRGCYC 1 cut(s) 2054
BarI GAAGNNNNNNTAC 4 cut(s) 334, 366, 460, 492
Bbv12I GWGCWC 3 cut(s) 1860, 1884, 2054
BbvI GCAGC 4 cut(s) 248, 633, 1243, 1246
BccI CCATC 6 cut(s) 500, 745, 764, 905, 1087, 1609
BceAI ACGGC 2 cut(s) 1752, 1968
BciT130I CCWGG 2 cut(s) 1395, 1458
BclI TGATCA 1 cut(s) 595
BfaI CTAG 2 cut(s) 908, 1590
BfmI CTRYAG 2 cut(s) 6, 337
BglII AGATCT 2 cut(s) 344, 1916
BisI GCNGC 4 cut(s) 237, 622, 1257, 1260
BlnI CCTAGG 1 cut(s) 1589
BlsI GCNGC 4 cut(s) 238, 623, 1258, 1261
Bme1390I CCNGG 2 cut(s) 1395, 1458
Bme18I GGWCC 2 cut(s) 1813, 2029
BmeT110I CYCGRG 3 cut(s) 1883, 2053, 2106
BmgBI CACGTC 1 cut(s) 356
BmgT120I GGNCC 2 cut(s) 1813, 2029
BmiI GGNNCC 1 cut(s) 267
BmrFI CCNGG 2 cut(s) 1395, 1458
BmsI GCATC 5 cut(s) 163, 223, 1486, 1729, 1945
BpmI CTGGAG 1 cut(s) 2082
Bpu14I TTCGAA 1 cut(s) 491
BpuEI CTTGAG 1 cut(s) 1778
BsaJI CCNNGG 3 cut(s) 414, 546, 1589
BsaWI WCCGGW 1 cut(s) 1297
Bsc4I CCNNNNNNNGG 3 cut(s) 1365, 1463, 1822
Bse1I ACTGG 1 cut(s) 2065
Bse21I CCTNAGG 1 cut(s) 696
Bse3DI GCAATG 4 cut(s) 457, 1779, 1900, 1995
BseAI TCCGGA 1 cut(s) 1297
BseBI CCWGG 2 cut(s) 1395, 1458
BseDI CCNNGG 3 cut(s) 414, 546, 1589
BseGI GGATG 5 cut(s) 745, 895, 1501, 1744, 1960
BseLI CCNNNNNNNGG 3 cut(s) 1365, 1463, 1822
BseMI GCAATG 4 cut(s) 457, 1779, 1900, 1995
BseMII CTCAG 5 cut(s) 1026, 1127, 1149, 1215, 1418
BseNI ACTGG 1 cut(s) 2065
BseRI GAGGAG 2 cut(s) 275, 1520
BseSI GKGCMC 1 cut(s) 1860
BseXI GCAGC 4 cut(s) 248, 633, 1243, 1246
BsgI GTGCAG 1 cut(s) 1152
Bsh1236I CGCG 1 cut(s) 637
BshNI GGYRCC 1 cut(s) 265
BsiHKAI GWGCWC 3 cut(s) 1860, 1884, 2054
BsiHKCI CYCGRG 3 cut(s) 1883, 2053, 2106
BsiSI CCGG 1 cut(s) 1298
BslFI GGGAC 1 cut(s) 468
BslI CCNNNNNNNGG 3 cut(s) 1365, 1463, 1822
BsmFI GGGAC 1 cut(s) 468
BsmI GAATGC 3 cut(s) 523, 939, 1054
BsoBI CYCGRG 3 cut(s) 1883, 2053, 2106
Bsp119I TTCGAA 1 cut(s) 491
Bsp1286I GDGCHC 3 cut(s) 1860, 1884, 2054
Bsp13I TCCGGA 1 cut(s) 1297
BspACI CCGC 3 cut(s) 1213, 1742, 1958
BspCNI CTCAG 5 cut(s) 1027, 1128, 1150, 1214, 1417
BspEI TCCGGA 1 cut(s) 1297
BspFNI CGCG 1 cut(s) 637
BspHI TCATGA 1 cut(s) 169
BspLI GGNNCC 1 cut(s) 267
BspMAI CTGCAG 1 cut(s) 10
BspPI GGATC 4 cut(s) 904, 938, 1438, 1602
BspT104I TTCGAA 1 cut(s) 491
BspT107I GGYRCC 1 cut(s) 265
BsrBI CCGCTC 1 cut(s) 1213
BsrDI GCAATG 4 cut(s) 457, 1779, 1900, 1995
BsrI ACTGG 1 cut(s) 2065
BssECI CCNNGG 3 cut(s) 414, 546, 1589
BssNAI GTATAC 1 cut(s) 2072
BssT1I CCWWGG 3 cut(s) 414, 546, 1589
Bst1107I GTATAC 1 cut(s) 2072
Bst2UI CCWGG 2 cut(s) 1395, 1458
Bst4CI ACNGT 6 cut(s) 254, 341, 405, 856, 1699, 2089
Bst6I CTCTTC 5 cut(s) 206, 849, 1479, 1779, 1995
BstAPI GCANNNNNTGC 3 cut(s) 1769, 1985, 2102
BstBI TTCGAA 1 cut(s) 491
BstC8I GCNNGC 4 cut(s) 1147, 1765, 1981, 2094
BstDEI CTNAG 7 cut(s) 66, 696, 1035, 1136, 1158, 1201, 1404
BstF5I GGATG 5 cut(s) 745, 895, 1501, 1744, 1960
BstFNI CGCG 1 cut(s) 637
BstMWI GCNNNNNNNGC 6 cut(s) 245, 1769, 1855, 1985, 2102, 2111
BstNI CCWGG 2 cut(s) 1395, 1458
BstNSI RCATGY 1 cut(s) 1637
BstSCI CCNGG 2 cut(s) 1393, 1456
BstSFI CTRYAG 2 cut(s) 6, 337
BstSLI GKGCMC 1 cut(s) 1860
BstUI CGCG 1 cut(s) 637
BstV1I GCAGC 4 cut(s) 248, 633, 1243, 1246
BstX2I RGATCY 3 cut(s) 344, 943, 1916
BstYI RGATCY 3 cut(s) 344, 943, 1916
BstZ17I GTATAC 1 cut(s) 2072
Bsu36I CCTNAGG 1 cut(s) 696
BtrI CACGTC 1 cut(s) 356
BtsCI GGATG 5 cut(s) 745, 895, 1501, 1744, 1960
BtsI GCAGTG 1 cut(s) 666
BtsIMutI CAGTG 6 cut(s) 666, 788, 1155, 1695, 1860, 2094
Cac8I GCNNGC 4 cut(s) 1147, 1765, 1981, 2094
CciI TCATGA 1 cut(s) 169
Cfr13I GGNCC 2 cut(s) 1813, 2029
CseI GACGC 3 cut(s) 599, 626, 1131
Csp6I GTAC 1 cut(s) 1624
CspCI CAANNNNNGTGG 2 cut(s) 1519, 1554
CviAII CATG 4 cut(s) 170, 651, 870, 1634
CviQI GTAC 1 cut(s) 1624
DdeI CTNAG 7 cut(s) 66, 696, 1035, 1136, 1158, 1201, 1404
DraIII CACNNNGTG 2 cut(s) 1769, 1985
Eam1104I CTCTTC 5 cut(s) 206, 849, 1479, 1779, 1995
EarI CTCTTC 5 cut(s) 206, 849, 1479, 1779, 1995
Ecl136II GAGCTC 1 cut(s) 2052
Eco130I CCWWGG 3 cut(s) 414, 546, 1589
Eco24I GRGCYC 1 cut(s) 2054
Eco32I GATATC 2 cut(s) 664, 1041
Eco47I GGWCC 2 cut(s) 1813, 2029
Eco53kI GAGCTC 1 cut(s) 2052
Eco57I CTGAAG 3 cut(s) 117, 198, 812
Eco81I CCTNAGG 1 cut(s) 696
Eco88I CYCGRG 3 cut(s) 1883, 2053, 2106
EcoICRI GAGCTC 1 cut(s) 2052
EcoRII CCWGG 2 cut(s) 1393, 1456
EcoRV GATATC 2 cut(s) 664, 1041
EcoT14I CCWWGG 3 cut(s) 414, 546, 1589
EcoT38I GRGCYC 1 cut(s) 2054
ErhI CCWWGG 3 cut(s) 414, 546, 1589
FaeI CATG 4 cut(s) 173, 654, 873, 1637
FaqI GGGAC 1 cut(s) 468
FatI CATG 4 cut(s) 169, 650, 869, 1633
FauNDI CATATG 1 cut(s) 949
FbaI TGATCA 1 cut(s) 595
FblI GTMKAC 2 cut(s) 1120, 2071
Fnu4HI GCNGC 4 cut(s) 237, 622, 1257, 1260
FokI GGATG 5 cut(s) 752, 902, 1508, 1751, 1967
FriOI GRGCYC 1 cut(s) 2054
Fsp4HI GCNGC 4 cut(s) 237, 622, 1257, 1260
FspBI CTAG 2 cut(s) 908, 1590
GluI GCNGC 4 cut(s) 237, 622, 1257, 1260
GsuI CTGGAG 1 cut(s) 2082
HapII CCGG 1 cut(s) 1298
HgaI GACGC 3 cut(s) 599, 626, 1131
Hin1II CATG 4 cut(s) 173, 654, 873, 1637
HinfI GANTC 6 cut(s) 187, 195, 216, 301, 500, 755
HpaII CCGG 1 cut(s) 1298
Hpy166II GTNNAC 7 cut(s) 568, 776, 1121, 1601, 1858, 2072, 2081
Hpy188III TCNNGA 8 cut(s) 170, 230, 1289, 1298, 1598, 1750, 1966, 2055
Hpy8I GTNNAC 7 cut(s) 568, 776, 1121, 1601, 1858, 2072, 2081
HpyCH4III ACNGT 6 cut(s) 254, 341, 405, 856, 1699, 2089
HpyCH4IV ACGT 4 cut(s) 355, 535, 685, 715
HpyF10VI GCNNNNNNNGC 6 cut(s) 245, 1769, 1855, 1985, 2102, 2111
HpyF3I CTNAG 7 cut(s) 66, 696, 1035, 1136, 1158, 1201, 1404
HpySE526I ACGT 4 cut(s) 355, 535, 685, 715
Hsp92II CATG 4 cut(s) 173, 654, 873, 1637
Kpn2I TCCGGA 1 cut(s) 1297
Ksp22I TGATCA 1 cut(s) 595
LmnI GCTCC 2 cut(s) 1507, 2063
Lsp1109I GCAGC 4 cut(s) 248, 633, 1243, 1246
LweI GCATC 5 cut(s) 163, 223, 1486, 1729, 1945
MaeI CTAG 2 cut(s) 908, 1590
MaeII ACGT 4 cut(s) 355, 535, 685, 715
MaeIII GTNAC 1 cut(s) 362
MbiI CCGCTC 1 cut(s) 1213
MfeI CAATTG 1 cut(s) 305
MflI RGATCY 3 cut(s) 344, 943, 1916
MhlI GDGCHC 3 cut(s) 1860, 1884, 2054
MlyI GAGTC 2 cut(s) 196, 204
MmeI TCCRAC 4 cut(s) 37, 1093, 1840, 2056
MroI TCCGGA 1 cut(s) 1297
MspI CCGG 1 cut(s) 1298
MspR9I CCNGG 2 cut(s) 1395, 1458
MunI CAATTG 1 cut(s) 305
Mva1269I GAATGC 3 cut(s) 523, 939, 1054
MvaI CCWGG 2 cut(s) 1395, 1458
MvnI CGCG 1 cut(s) 637
MwoI GCNNNNNNNGC 6 cut(s) 245, 1769, 1855, 1985, 2102, 2111
NdeI CATATG 1 cut(s) 949
NlaIII CATG 4 cut(s) 173, 654, 873, 1637
NlaIV GGNNCC 1 cut(s) 267
NspI RCATGY 1 cut(s) 1637
NspV TTCGAA 1 cut(s) 491
PaeR7I CTCGAG 3 cut(s) 1883, 2053, 2106
PagI TCATGA 1 cut(s) 169
PcsI WCGNNNNNNNCGW 1 cut(s) 2080
PctI GAATGC 3 cut(s) 523, 939, 1054
PfeI GAWTC 4 cut(s) 216, 301, 500, 755
PflMI CCANNNNNTGG 2 cut(s) 1365, 1822
PkrI GCNGC 4 cut(s) 238, 623, 1258, 1261
PleI GAGTC 2 cut(s) 195, 203
PpsI GAGTC 2 cut(s) 195, 203
PshBI ATTAAT 2 cut(s) 324, 1413
PsiI TTATAA 1 cut(s) 438
Psp124BI GAGCTC 1 cut(s) 2054
Psp1406I AACGTT 3 cut(s) 535, 685, 715
Psp6I CCWGG 2 cut(s) 1393, 1456
PspGI CCWGG 2 cut(s) 1393, 1456
PspN4I GGNNCC 1 cut(s) 267
PspPI GGNCC 2 cut(s) 1813, 2029
PspXI VCTCGAGB 2 cut(s) 1883, 2106
PstI CTGCAG 1 cut(s) 10
PsuI RGATCY 3 cut(s) 344, 943, 1916
RsaI GTAC 1 cut(s) 1625
RsaNI GTAC 1 cut(s) 1624
SacI GAGCTC 1 cut(s) 2054
SatI GCNGC 4 cut(s) 237, 622, 1257, 1260
Sau96I GGNCC 2 cut(s) 1813, 2029
SchI GAGTC 2 cut(s) 196, 204
ScrFI CCNGG 2 cut(s) 1395, 1458
SduI GDGCHC 3 cut(s) 1860, 1884, 2054
SfaNI GCATC 5 cut(s) 163, 223, 1486, 1729, 1945
SfcI CTRYAG 2 cut(s) 6, 337
Sfr274I CTCGAG 3 cut(s) 1883, 2053, 2106
SfuI TTCGAA 1 cut(s) 491
SinI GGWCC 2 cut(s) 1813, 2029
SlaI CTCGAG 3 cut(s) 1883, 2053, 2106
SmlI CTYRAG 4 cut(s) 1793, 1883, 2053, 2106
SmoI CTYRAG 4 cut(s) 1793, 1883, 2053, 2106
SsiI CCGC 3 cut(s) 1213, 1742, 1958
SspMI CTAG 2 cut(s) 908, 1590
SstI GAGCTC 1 cut(s) 2054
StyD4I CCNGG 2 cut(s) 1393, 1456
StyI CCWWGG 3 cut(s) 414, 546, 1589
TaaI ACNGT 6 cut(s) 254, 341, 405, 856, 1699, 2089
TaiI ACGT 4 cut(s) 358, 538, 688, 718
TaqI TCGA 7 cut(s) 146, 229, 491, 1098, 1884, 2054, 2107
TfiI GAWTC 4 cut(s) 216, 301, 500, 755
TscAI CASTG 6 cut(s) 673, 795, 1162, 1702, 1867, 2094
TseI GCWGC 4 cut(s) 236, 621, 1256, 1259
TspDTI ATGAA 8 cut(s) 158, 468, 588, 624, 906, 1260, 1598, 1889
TspGWI ACGGA 1 cut(s) 793
TspRI CASTG 6 cut(s) 673, 795, 1162, 1702, 1867, 2094
Van91I CCANNNNNTGG 2 cut(s) 1365, 1822
VneI GTGCAC 1 cut(s) 1856
VpaK11BI GGWCC 2 cut(s) 1813, 2029
VspI ATTAAT 2 cut(s) 324, 1413
XapI RAATTY 1 cut(s) 61
XceI RCATGY 1 cut(s) 1637
XhoI CTCGAG 3 cut(s) 1883, 2053, 2106
XmaJI CCTAGG 1 cut(s) 1589
XmiI GTMKAC 2 cut(s) 1120, 2071
XspI CTAG 2 cut(s) 908, 1590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.