Rroxscaffold_1G00008640

Ferrous iron transport protein B

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
10915551 .. 10915988
438 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00008640.1

Sequence Viewer

Length: 438 bp
ATGTCTGCAGATGAAAAATTAAGGTTTAAGTTCAATAAGAAACTCAAAATAGCAGTTGGAAATTCCAAGTTTTCAAATAGTGGAAGAAAGAAGGCTGAAAATGATGTCAATGAGAGTCAGAATGGTAAGAGAGAGAACTATAAATCAAGTGTAAGAGATAAGAAGTTTCATTCTGCTGAAGAACGGAGGTGGGGAGTTTTTGATAGAAGGAAGAGAAACTATGTTGATCGAGAAGCAGCGTGGGAGGCTAACAGTAATGAGGAGGCACCTTATAGGAAGGTTTTATCTAAAAAAGGACAGAATCAATTGAAGCATGGTTATATTAATGAGAAGAACTACAGTAGATCTCCTTCACGTCCTTGTTACAAGCGGGGTTCTAATGAGAGTGCTTCTGAGACAACGGTTTTCTCCCAAGGAGAGAAGTGCAAAAGTTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

145

Amino Acids

16.88

Weight (kDa)

9.97

Isoelectric Point (pI)

44.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 436
AccB1I GGYRCC 1 cut(s) 265
AciI CCGC 1 cut(s) 370
AcsI RAATTY 1 cut(s) 61
AcuI CTGAAG 1 cut(s) 198
AgsI TTSAA 3 cut(s) 34, 75, 310
AjiI CACGTC 1 cut(s) 356
Alw26I GTCTC 1 cut(s) 389
ApeKI GCWGC 1 cut(s) 236
ApoI RAATTY 1 cut(s) 61
AseI ATTAAT 1 cut(s) 324
BanI GGYRCC 1 cut(s) 265
BarI GAAGNNNNNNTAC 2 cut(s) 334, 366
BbvI GCAGC 1 cut(s) 248
BcoDI GTCTC 1 cut(s) 389
BfmI CTRYAG 2 cut(s) 6, 337
BglII AGATCT 1 cut(s) 344
BisI GCNGC 1 cut(s) 237
BlsI GCNGC 1 cut(s) 238
BmgBI CACGTC 1 cut(s) 356
BmiI GGNNCC 1 cut(s) 267
BsaJI CCNNGG 1 cut(s) 412
BseDI CCNNGG 1 cut(s) 412
BseMII CTCAG 1 cut(s) 384
BseRI GAGGAG 1 cut(s) 275
BseXI GCAGC 1 cut(s) 248
BshNI GGYRCC 1 cut(s) 265
BsmAI GTCTC 1 cut(s) 389
Bsp143I GATC 2 cut(s) 226, 344
BspACI CCGC 1 cut(s) 370
BspCNI CTCAG 1 cut(s) 385
BspLI GGNNCC 1 cut(s) 267
BspMAI CTGCAG 1 cut(s) 10
BspT107I GGYRCC 1 cut(s) 265
BssECI CCNNGG 1 cut(s) 412
BssMI GATC 2 cut(s) 226, 344
BssT1I CCWWGG 1 cut(s) 412
Bst4CI ACNGT 3 cut(s) 254, 341, 403
Bst6I CTCTTC 1 cut(s) 206
BstDEI CTNAG 1 cut(s) 393
BstKTI GATC 2 cut(s) 229, 347
BstMAI GTCTC 1 cut(s) 389
BstMBI GATC 2 cut(s) 226, 344
BstMWI GCNNNNNNNGC 1 cut(s) 245
BstSFI CTRYAG 2 cut(s) 6, 337
BstV1I GCAGC 1 cut(s) 248
BstX2I RGATCY 1 cut(s) 344
BstYI RGATCY 1 cut(s) 344
BtrI CACGTC 1 cut(s) 356
CviAII CATG 1 cut(s) 314
CviJI RGCY 2 cut(s) 95, 248
CviKI_1 RGCY 2 cut(s) 95, 248
DdeI CTNAG 1 cut(s) 393
DpnI GATC 2 cut(s) 228, 346
DpnII GATC 2 cut(s) 226, 344
Eam1104I CTCTTC 1 cut(s) 206
EarI CTCTTC 1 cut(s) 206
Eco130I CCWWGG 1 cut(s) 412
Eco57I CTGAAG 1 cut(s) 198
EcoT14I CCWWGG 1 cut(s) 412
ErhI CCWWGG 1 cut(s) 412
FaeI CATG 1 cut(s) 317
FaiI YATR 6 cut(s) 141, 222, 273, 315, 321, 436
FatI CATG 1 cut(s) 313
FauI CCCGC 1 cut(s) 363
Fnu4HI GCNGC 1 cut(s) 237
Fsp4HI GCNGC 1 cut(s) 237
GluI GCNGC 1 cut(s) 237
Hin1II CATG 1 cut(s) 317
HinfI GANTC 2 cut(s) 115, 301
Hpy188I TCNGA 2 cut(s) 120, 394
Hpy188III TCNNGA 1 cut(s) 230
HpyAV CCTTC 4 cut(s) 85, 201, 271, 360
HpyCH4III ACNGT 3 cut(s) 254, 341, 403
HpyCH4IV ACGT 1 cut(s) 355
HpyCH4V TGCA 2 cut(s) 8, 426
HpyF10VI GCNNNNNNNGC 1 cut(s) 245
HpyF3I CTNAG 1 cut(s) 393
HpySE526I ACGT 1 cut(s) 355
Hsp92II CATG 1 cut(s) 317
Kzo9I GATC 2 cut(s) 226, 344
Lsp1109I GCAGC 1 cut(s) 248
MaeII ACGT 1 cut(s) 355
MaeIII GTNAC 1 cut(s) 362
MalI GATC 2 cut(s) 228, 346
MboI GATC 2 cut(s) 226, 344
MboII GAAGA 4 cut(s) 96, 191, 223, 343
MfeI CAATTG 1 cut(s) 305
MflI RGATCY 1 cut(s) 344
MluCI AATT 3 cut(s) 17, 61, 305
MlyI GAGTC 1 cut(s) 124
MmeI TCCRAC 1 cut(s) 37
MnlI CCTC 4 cut(s) 180, 238, 253, 256
MseI TTAA 3 cut(s) 20, 27, 324
MunI CAATTG 1 cut(s) 305
MwoI GCNNNNNNNGC 1 cut(s) 245
NdeII GATC 2 cut(s) 226, 344
NlaIII CATG 1 cut(s) 317
NlaIV GGNNCC 1 cut(s) 267
PfeI GAWTC 1 cut(s) 301
PkrI GCNGC 1 cut(s) 238
PleI GAGTC 1 cut(s) 123
PpsI GAGTC 1 cut(s) 123
PshBI ATTAAT 1 cut(s) 324
PsiI TTATAA 1 cut(s) 436
PspN4I GGNNCC 1 cut(s) 267
PstI CTGCAG 1 cut(s) 10
PsuI RGATCY 1 cut(s) 344
SaqAI TTAA 3 cut(s) 20, 27, 324
SatI GCNGC 1 cut(s) 237
Sau3AI GATC 2 cut(s) 226, 344
SchI GAGTC 1 cut(s) 124
SetI ASST 5 cut(s) 26, 191, 271, 282, 358
SfcI CTRYAG 2 cut(s) 6, 337
Sse9I AATT 3 cut(s) 17, 61, 305
SsiI CCGC 1 cut(s) 370
StyI CCWWGG 1 cut(s) 412
TaaI ACNGT 3 cut(s) 254, 341, 403
TaiI ACGT 1 cut(s) 358
TaqI TCGA 1 cut(s) 229
TasI AATT 3 cut(s) 17, 61, 305
TfiI GAWTC 1 cut(s) 301
Tru1I TTAA 3 cut(s) 20, 27, 324
Tru9I TTAA 3 cut(s) 20, 27, 324
TseI GCWGC 1 cut(s) 236
TspDTI ATGAA 2 cut(s) 27, 158
TspGWI ACGGA 1 cut(s) 199
VspI ATTAAT 1 cut(s) 324
XapI RAATTY 1 cut(s) 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.