Rh5AG483100

Ferrous iron transport protein B

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0002736
Physical Location & Seq
Forward (+)
82699101 .. 82702661
3561 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG483100.1

Sequence Viewer

Length: 1815 bp
ATGTCTGCAGAGGAAAAATTAAGGTTTAAGTTCAATAAGAAACTCAAAATAGCAGTTGGAAATTTGAAGTTTTCAAATAGTGGGAGAAAGAAGGCTGAAGATAATGTCAATGAAAGAGAGAACTATAAATCAAGTGTAAGAGATAAGAAGTTTCATACTGCTGAAGAGGGGAGTCGGGGAGTTTTTGATAGAAGGAAGAGAATCTATGTTGATCGAGATGCAGCTTGGGAGGCTAACAGTAATGAGGAGGCACCTTATAGGAAGGTTTTATCTAAAAAAGGACAGAATCAATTGAAGTATGGTTATATTAATGAGAAGAACTACAGTAGATCTCCTTCACGTCCTCGTTACAAGTGGGGTTCTAATGAGAGTGCTTCTGAAACTAAACGGTTTTCTCCCAAGGGGAGAAGTGCAAAAGTTTATAATAACTTCGGCAATGAAAAGAATAATAGTAGATTTCCTTCTTGTCCCCGTTCGAAGTGGGATTCTGATGGATTAGAGAATGCTTCTGAAACTAAACGTTTTTCTCCCAAGGTTAGAAGTGCAAAAGTTTACAATGAAACAAAAGTTAGGGACGCTGATAATTTTGGTAATGAAAAGAGTAGCAGCAGATCTCCTTCGCGTCCTCGCTCTACATGGGGTTCTGATATCACTGCTTCTGAAACTAAACGTTTTTCTCCTAAGGTTAGAAGTGAGAAACGTTCCAATAAAACCAAAGTTAAGGATGTTGATAAGATGGAATCTATTACAACTGATGGTGGACGGAGTGCTTCACTGAAGAAACATAACCAAATAAAACCAGACTTGCAAAAATTCCCAAATATATCTCTTCCAAATACTGTGAAGAAAAAAGCATGGGAAAAGAATATCTCGGATGAAGGATCAGATGTGCTAGATGGTCAGCGAAAGAAGAAGCGAATGCGACCAGATCCATATGACATTTCAAATAAACGACTTGATGATAGTATTGCTAAAATTGAAAACTTAAAGGAGAAGGAAAAAGATGTTGAGGAAAAAGCTGAGATATCAAAGAATGCACAATTTCGTGCAATCCAACCAAGTCCATCAATCCTTTCCTATGTCGAAGATAATTTGTTGGGTCGTAGACGCTTGATTGAGCTGAGGAGGGCAGGGTACAACACTGAGCTTTCTGCACCATTGGATGATACTCCTTTCTCTACCAGCTCAGAAAGAGAGCGGATTGAGGAAAATATATTTAGGAGTAAATTGACATTTTTTGCTGCTGCAAAAGTTTCATCATCATTTCCACCTCCTGATCTTCCGGAGATTGCATTTGCAGGAAGGTCAAATGTTGGGAAATCATCACTACTTAATGCACTTACCAGAAATTGGGGTGTTGCACGAACATCAGATAAGCCTGGTCTTACTCAGAGTATTAATTTCTTCAATCTTGGATCAAAGCTCTGTTTGGTTGATTTGCCTGGATATGGCTTTGCTTATGCCAAAGAAGAGGTTAAGGATGCTTGGGAGGAGCTTGTGAAGGAGTATGTTTCCACAAGAGTTGGTCTAAAACGAGTGTGCTTACTTATTGATACCAAATGGGGAATGAAGCCTAGGGATCGTGAACTCATTGACCTGATGGAAAGATCTCAAACCAAGTATCAGATCTTATTAACGAAATCGGATGCGGTTTTCCCGATTGATGTAGCACGCCGTGCAATGCAAATTGAAGAGAGCCTCAAGGAAAATAAGTCTCTGGTCCAACCTGTGATGATGATGAGCTCGAGAACTGGAGCTGGTATACGAAGTTTACGAACAGTGCTGGCAAAAATTGCTCGAGTTGCCAAAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MMR_HSR1

Protein Analysis

604

Amino Acids

68.88

Weight (kDa)

9.92

Isoelectric Point (pI)

56.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MMR_HSR1 PF01926 429 - 547 1.5e-19 50S ribosome-binding GTPase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 423
AccB1I GGYRCC 1 cut(s) 250
AccB7I CCANNNNNTGG 1 cut(s) 1350
AccBSI CCGCTC 1 cut(s) 1198
AccI GTMKAC 2 cut(s) 1105, 1762
AccII CGCG 1 cut(s) 622
AccIII TCCGGA 1 cut(s) 1282
AciI CCGC 2 cut(s) 1198, 1649
AclI AACGTT 3 cut(s) 520, 670, 700
AclWI GGATC 4 cut(s) 889, 923, 1423, 1587
AcsI RAATTY 2 cut(s) 61, 812
AcuI CTGAAG 3 cut(s) 117, 183, 797
AdeI CACNNNGTG 1 cut(s) 1676
AfaI GTAC 1 cut(s) 1136
AfiI CCNNNNNNNGG 2 cut(s) 1350, 1448
AgsI TTSAA 8 cut(s) 34, 67, 75, 295, 945, 980, 1408, 1691
AjiI CACGTC 1 cut(s) 341
AjnI CCWGG 2 cut(s) 1378, 1441
AluBI AGCT 9 cut(s) 224, 1019, 1120, 1147, 1185, 1423, 1495, 1743, 1757
AluI AGCT 9 cut(s) 224, 1019, 1120, 1147, 1185, 1423, 1495, 1743, 1757
Alw21I GWGCWC 1 cut(s) 1745
Alw26I GTCTC 1 cut(s) 1719
AlwI GGATC 4 cut(s) 889, 923, 1423, 1587
Ama87I CYCGRG 2 cut(s) 1744, 1797
Aor13HI TCCGGA 1 cut(s) 1282
ApeKI GCWGC 4 cut(s) 221, 606, 1241, 1244
ApoI RAATTY 2 cut(s) 61, 812
AseI ATTAAT 2 cut(s) 309, 1398
AspA2I CCTAGG 1 cut(s) 1574
AspS9I GGNCC 1 cut(s) 1720
AsuII TTCGAA 1 cut(s) 476
AvaI CYCGRG 2 cut(s) 1744, 1797
AvaII GGWCC 1 cut(s) 1720
AvrII CCTAGG 1 cut(s) 1574
AxyI CCTNAGG 1 cut(s) 681
BanI GGYRCC 1 cut(s) 250
BanII GRGCYC 1 cut(s) 1745
BarI GAAGNNNNNNTAC 4 cut(s) 319, 351, 445, 477
Bbv12I GWGCWC 1 cut(s) 1745
BbvCI CCTCAGC 1 cut(s) 1121
BbvI GCAGC 4 cut(s) 233, 618, 1228, 1231
BccI CCATC 6 cut(s) 485, 730, 749, 890, 1072, 1594
BceAI ACGGC 1 cut(s) 1659
BciT130I CCWGG 2 cut(s) 1380, 1443
BcoDI GTCTC 1 cut(s) 1719
BfaI CTAG 2 cut(s) 893, 1575
BfmI CTRYAG 2 cut(s) 6, 322
BglII AGATCT 4 cut(s) 329, 611, 1607, 1626
BisI GCNGC 4 cut(s) 222, 607, 1242, 1245
BlnI CCTAGG 1 cut(s) 1574
BlsI GCNGC 4 cut(s) 223, 608, 1243, 1246
Bme1390I CCNGG 2 cut(s) 1380, 1443
Bme18I GGWCC 1 cut(s) 1720
BmeT110I CYCGRG 2 cut(s) 1744, 1797
BmgBI CACGTC 1 cut(s) 341
BmgT120I GGNCC 1 cut(s) 1720
BmiI GGNNCC 1 cut(s) 252
BmrFI CCNGG 2 cut(s) 1380, 1443
BmsI GCATC 3 cut(s) 208, 1471, 1636
BpmI CTGGAG 1 cut(s) 1773
Bpu10I CCTNAGC 1 cut(s) 1121
Bpu14I TTCGAA 1 cut(s) 476
BpuEI CTTGAG 1 cut(s) 1685
BsaJI CCNNGG 3 cut(s) 399, 531, 1574
BsaWI WCCGGW 1 cut(s) 1282
Bsc4I CCNNNNNNNGG 2 cut(s) 1350, 1448
Bse1I ACTGG 1 cut(s) 1756
Bse21I CCTNAGG 1 cut(s) 681
Bse3DI GCAATG 2 cut(s) 442, 1686
BseAI TCCGGA 1 cut(s) 1282
BseBI CCWGG 2 cut(s) 1380, 1443
BseDI CCNNGG 3 cut(s) 399, 531, 1574
BseGI GGATG 5 cut(s) 730, 880, 1168, 1486, 1651
BseLI CCNNNNNNNGG 2 cut(s) 1350, 1448
BseMI GCAATG 2 cut(s) 442, 1686
BseMII CTCAG 5 cut(s) 1011, 1112, 1134, 1200, 1403
BseNI ACTGG 1 cut(s) 1756
BseRI GAGGAG 3 cut(s) 260, 1138, 1505
BseXI GCAGC 4 cut(s) 233, 618, 1228, 1231
BsgI GTGCAG 1 cut(s) 1137
Bsh1236I CGCG 1 cut(s) 622
BshNI GGYRCC 1 cut(s) 250
BsiHKAI GWGCWC 1 cut(s) 1745
BsiHKCI CYCGRG 2 cut(s) 1744, 1797
BsiSI CCGG 1 cut(s) 1283
BslFI GGGAC 2 cut(s) 453, 587
BslI CCNNNNNNNGG 2 cut(s) 1350, 1448
BsmAI GTCTC 1 cut(s) 1719
BsmFI GGGAC 2 cut(s) 453, 587
BsmI GAATGC 3 cut(s) 508, 924, 1039
BsoBI CYCGRG 2 cut(s) 1744, 1797
Bsp119I TTCGAA 1 cut(s) 476
Bsp1286I GDGCHC 1 cut(s) 1745
Bsp13I TCCGGA 1 cut(s) 1282
BspACI CCGC 2 cut(s) 1198, 1649
BspCNI CTCAG 5 cut(s) 1012, 1113, 1135, 1199, 1402
BspEI TCCGGA 1 cut(s) 1282
BspFNI CGCG 1 cut(s) 622
BspLI GGNNCC 1 cut(s) 252
BspMAI CTGCAG 1 cut(s) 10
BspPI GGATC 4 cut(s) 889, 923, 1423, 1587
BspT104I TTCGAA 1 cut(s) 476
BspT107I GGYRCC 1 cut(s) 250
BsrBI CCGCTC 1 cut(s) 1198
BsrDI GCAATG 2 cut(s) 442, 1686
BsrI ACTGG 1 cut(s) 1756
BssECI CCNNGG 3 cut(s) 399, 531, 1574
BssNAI GTATAC 1 cut(s) 1763
BssT1I CCWWGG 3 cut(s) 399, 531, 1574
Bst1107I GTATAC 1 cut(s) 1763
Bst2UI CCWGG 2 cut(s) 1380, 1443
Bst4CI ACNGT 5 cut(s) 239, 326, 390, 841, 1780
Bst6I CTCTTC 5 cut(s) 159, 191, 834, 1464, 1686
BstAPI GCANNNNNTGC 2 cut(s) 1676, 1793
BstBI TTCGAA 1 cut(s) 476
BstC8I GCNNGC 2 cut(s) 1672, 1785
BstDEI CTNAG 6 cut(s) 681, 1020, 1121, 1143, 1186, 1389
BstF5I GGATG 5 cut(s) 730, 880, 1168, 1486, 1651
BstFNI CGCG 1 cut(s) 622
BstMAI GTCTC 1 cut(s) 1719
BstMWI GCNNNNNNNGC 4 cut(s) 230, 1676, 1793, 1802
BstNI CCWGG 2 cut(s) 1380, 1443
BstSCI CCNGG 2 cut(s) 1378, 1441
BstSFI CTRYAG 2 cut(s) 6, 322
BstUI CGCG 1 cut(s) 622
BstV1I GCAGC 4 cut(s) 233, 618, 1228, 1231
BstX2I RGATCY 5 cut(s) 329, 611, 928, 1607, 1626
BstYI RGATCY 5 cut(s) 329, 611, 928, 1607, 1626
BstZ17I GTATAC 1 cut(s) 1763
Bsu36I CCTNAGG 1 cut(s) 681
BtrI CACGTC 1 cut(s) 341
BtsCI GGATG 5 cut(s) 730, 880, 1168, 1486, 1651
BtsI GCAGTG 1 cut(s) 651
BtsIMutI CAGTG 4 cut(s) 651, 773, 1140, 1785
Cac8I GCNNGC 2 cut(s) 1672, 1785
Cfr13I GGNCC 1 cut(s) 1720
CseI GACGC 3 cut(s) 584, 611, 1116
Csp6I GTAC 1 cut(s) 1135
CspCI CAANNNNNGTGG 2 cut(s) 1504, 1539
CviAII CATG 2 cut(s) 636, 855
CviQI GTAC 1 cut(s) 1135
DdeI CTNAG 6 cut(s) 681, 1020, 1121, 1143, 1186, 1389
DraIII CACNNNGTG 1 cut(s) 1676
Eam1104I CTCTTC 5 cut(s) 159, 191, 834, 1464, 1686
EarI CTCTTC 5 cut(s) 159, 191, 834, 1464, 1686
Ecl136II GAGCTC 1 cut(s) 1743
Eco130I CCWWGG 3 cut(s) 399, 531, 1574
Eco24I GRGCYC 1 cut(s) 1745
Eco32I GATATC 2 cut(s) 649, 1026
Eco47I GGWCC 1 cut(s) 1720
Eco53kI GAGCTC 1 cut(s) 1743
Eco57I CTGAAG 3 cut(s) 117, 183, 797
Eco81I CCTNAGG 1 cut(s) 681
Eco88I CYCGRG 2 cut(s) 1744, 1797
EcoICRI GAGCTC 1 cut(s) 1743
EcoRII CCWGG 2 cut(s) 1378, 1441
EcoRV GATATC 2 cut(s) 649, 1026
EcoT14I CCWWGG 3 cut(s) 399, 531, 1574
EcoT38I GRGCYC 1 cut(s) 1745
ErhI CCWWGG 3 cut(s) 399, 531, 1574
FaeI CATG 2 cut(s) 639, 858
FaqI GGGAC 2 cut(s) 453, 587
FatI CATG 2 cut(s) 635, 854
FauNDI CATATG 1 cut(s) 934
FblI GTMKAC 2 cut(s) 1105, 1762
Fnu4HI GCNGC 4 cut(s) 222, 607, 1242, 1245
FokI GGATG 5 cut(s) 737, 887, 1175, 1493, 1658
FriOI GRGCYC 1 cut(s) 1745
Fsp4HI GCNGC 4 cut(s) 222, 607, 1242, 1245
FspBI CTAG 2 cut(s) 893, 1575
GluI GCNGC 4 cut(s) 222, 607, 1242, 1245
GsuI CTGGAG 1 cut(s) 1773
HapII CCGG 1 cut(s) 1283
HgaI GACGC 3 cut(s) 584, 611, 1116
Hin1II CATG 2 cut(s) 639, 858
HinfI GANTC 5 cut(s) 172, 201, 286, 485, 740
HpaII CCGG 1 cut(s) 1283
Hpy166II GTNNAC 6 cut(s) 553, 761, 1106, 1586, 1763, 1772
Hpy188III TCNNGA 6 cut(s) 215, 1274, 1283, 1583, 1657, 1746
Hpy8I GTNNAC 6 cut(s) 553, 761, 1106, 1586, 1763, 1772
HpyCH4III ACNGT 5 cut(s) 239, 326, 390, 841, 1780
HpyCH4IV ACGT 4 cut(s) 340, 520, 670, 700
HpyF10VI GCNNNNNNNGC 4 cut(s) 230, 1676, 1793, 1802
HpyF3I CTNAG 6 cut(s) 681, 1020, 1121, 1143, 1186, 1389
HpySE526I ACGT 4 cut(s) 340, 520, 670, 700
Hsp92II CATG 2 cut(s) 639, 858
Kpn2I TCCGGA 1 cut(s) 1282
LmnI GCTCC 2 cut(s) 1492, 1754
Lsp1109I GCAGC 4 cut(s) 233, 618, 1228, 1231
LweI GCATC 3 cut(s) 208, 1471, 1636
MaeI CTAG 2 cut(s) 893, 1575
MaeII ACGT 4 cut(s) 340, 520, 670, 700
MaeIII GTNAC 1 cut(s) 347
MbiI CCGCTC 1 cut(s) 1198
MfeI CAATTG 1 cut(s) 290
MflI RGATCY 5 cut(s) 329, 611, 928, 1607, 1626
MhlI GDGCHC 1 cut(s) 1745
MlyI GAGTC 1 cut(s) 181
MmeI TCCRAC 3 cut(s) 37, 1078, 1747
MroI TCCGGA 1 cut(s) 1282
MseI TTAA 9 cut(s) 20, 27, 309, 720, 986, 1332, 1398, 1476, 1634
MspI CCGG 1 cut(s) 1283
MspR9I CCNGG 2 cut(s) 1380, 1443
MunI CAATTG 1 cut(s) 290
Mva1269I GAATGC 3 cut(s) 508, 924, 1039
MvaI CCWGG 2 cut(s) 1380, 1443
MvnI CGCG 1 cut(s) 622
MwoI GCNNNNNNNGC 4 cut(s) 230, 1676, 1793, 1802
NdeI CATATG 1 cut(s) 934
NlaIII CATG 2 cut(s) 639, 858
NlaIV GGNNCC 1 cut(s) 252
NspV TTCGAA 1 cut(s) 476
PaeR7I CTCGAG 2 cut(s) 1744, 1797
PcsI WCGNNNNNNNCGW 1 cut(s) 1771
PctI GAATGC 3 cut(s) 508, 924, 1039
PfeI GAWTC 4 cut(s) 201, 286, 485, 740
PflMI CCANNNNNTGG 1 cut(s) 1350
PkrI GCNGC 4 cut(s) 223, 608, 1243, 1246
PleI GAGTC 1 cut(s) 180
PpsI GAGTC 1 cut(s) 180
PshBI ATTAAT 2 cut(s) 309, 1398
PsiI TTATAA 1 cut(s) 423
Psp124BI GAGCTC 1 cut(s) 1745
Psp1406I AACGTT 3 cut(s) 520, 670, 700
Psp6I CCWGG 2 cut(s) 1378, 1441
PspGI CCWGG 2 cut(s) 1378, 1441
PspN4I GGNNCC 1 cut(s) 252
PspPI GGNCC 1 cut(s) 1720
PspXI VCTCGAGB 1 cut(s) 1797
PstI CTGCAG 1 cut(s) 10
PsuI RGATCY 5 cut(s) 329, 611, 928, 1607, 1626
RsaI GTAC 1 cut(s) 1136
RsaNI GTAC 1 cut(s) 1135
SacI GAGCTC 1 cut(s) 1745
SaqAI TTAA 9 cut(s) 20, 27, 309, 720, 986, 1332, 1398, 1476, 1634
SatI GCNGC 4 cut(s) 222, 607, 1242, 1245
Sau96I GGNCC 1 cut(s) 1720
SchI GAGTC 1 cut(s) 181
ScrFI CCNGG 2 cut(s) 1380, 1443
SduI GDGCHC 1 cut(s) 1745
SfaNI GCATC 3 cut(s) 208, 1471, 1636
SfcI CTRYAG 2 cut(s) 6, 322
Sfr274I CTCGAG 2 cut(s) 1744, 1797
SfuI TTCGAA 1 cut(s) 476
SinI GGWCC 1 cut(s) 1720
SlaI CTCGAG 2 cut(s) 1744, 1797
SmlI CTYRAG 3 cut(s) 1700, 1744, 1797
SmoI CTYRAG 3 cut(s) 1700, 1744, 1797
SsiI CCGC 2 cut(s) 1198, 1649
SspMI CTAG 2 cut(s) 893, 1575
SstI GAGCTC 1 cut(s) 1745
StyD4I CCNGG 2 cut(s) 1378, 1441
StyI CCWWGG 3 cut(s) 399, 531, 1574
TaaI ACNGT 5 cut(s) 239, 326, 390, 841, 1780
TaiI ACGT 4 cut(s) 343, 523, 673, 703
TaqI TCGA 5 cut(s) 214, 476, 1083, 1745, 1798
TfiI GAWTC 4 cut(s) 201, 286, 485, 740
Tru1I TTAA 9 cut(s) 20, 27, 309, 720, 986, 1332, 1398, 1476, 1634
Tru9I TTAA 9 cut(s) 20, 27, 309, 720, 986, 1332, 1398, 1476, 1634
TscAI CASTG 4 cut(s) 658, 780, 1147, 1785
TseI GCWGC 4 cut(s) 221, 606, 1241, 1244
TspDTI ATGAA 8 cut(s) 126, 143, 453, 573, 609, 891, 1245, 1583
TspGWI ACGGA 1 cut(s) 778
TspRI CASTG 4 cut(s) 658, 780, 1147, 1785
Van91I CCANNNNNTGG 1 cut(s) 1350
VpaK11BI GGWCC 1 cut(s) 1720
VspI ATTAAT 2 cut(s) 309, 1398
XapI RAATTY 2 cut(s) 61, 812
XhoI CTCGAG 2 cut(s) 1744, 1797
XmaJI CCTAGG 1 cut(s) 1574
XmiI GTMKAC 2 cut(s) 1105, 1762
XspI CTAG 2 cut(s) 893, 1575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.