Rh5BG495400

Ferrous iron transport protein B

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0002736
Physical Location & Seq
Reverse (-)
78895581 .. 78904183
8603 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG495400.1

Sequence Viewer

Length: 1422 bp
ATGCAAGAACTGAACTGGAGCAGTGATCCAATTCGCGGTTTACAGTTGGGTCTGGTTTTCAAGGCTTCGTGCTTTGGGTGGTCGCCGTTGAGGTTCAAAGGAGTCCGGTGGGATTCAATCATCAGCTTGAATTTCAATATCTTCAGCCAGGGCTCTGAAGTGTATGCCAAACGAAGATTTTCCTTTGTAAGAGATAAGAAGTTTCATTCTGCTGAAGAACGGAGGTGGGGAGTTTTTGATAGAAGGAAGAGAATCTATGTTGATCGAGATGCAGCTTGGGAGGCTAACAGTAATGAGGAGGCACCTTATAGGAAGGTTTTATCTAAAAAAGGACAGAATCAATTGAAGTATTGTTATATTAATGAGAAGAACTACAGTAGATCTCCTTCACGTCCTCGTTACAAGCGGGGTTCTAATGAGAGTGCTTCTGAGACTAAACGGTTTTCTCCCAAGGAGAGAAGTGCAAAAGTTTATAACAACTTCGGCAATGAAAAGAATAATAGTAGGTTTCCTTCTCGTCCCCGTTCTAAGTGGGGTTCTGATGGATTAGAGAATGCTTCTGAAACTAAACGTTTTTCTCCCAAGGTTAGAAGTGCAAAAGTTTACAATGAAACAAAATTTAAGGAGGCTGATAATTTTGGTAATATTAAGAGTAGCAGTAGATCTACTTCGCGTCCTCGCTCTACATGGGGTTCTGATAAGCAATGTTCTGAAACTAAACGTTTTTCTCCTAAGGTTAGAAGTGAGAAACGTTCCAATAAAACCAAAGTTAAGGATGATGATAAGATGGAATCCATTACAACTGATGATGGTCGGAGTGCTTCACTGAAGAAACATAACCAAATAAAACCAGACTTGCAAAAATCCCCAAATATATCTCTTCCAAATACTGTGAAGAAAAAAGCACGGAACAAGAATATCTCGGATGAAGGATCAGAGGTGCTAGATGGTCAGCCAAAGAAGAAGCAAATTCGACTAGATCCATACGACATTTCAAATAAACGTCTTGATGATAGTATTGCTACAAATGTTTTCTTTTCATGCAGAAAACTTAAAGGAAAGGAAAACGCTGAGATATCAAAGAACGCACAATTTCGTGCAATCCAACCAAGTCTGTCAGTCCTCTCCTATGTCGAAGATAATACGATTGAACTGAAGAGGGCAGGCTACAACACTGAGCTTTCTGCACCATTGGATAATACTCCATTCTCTATCAGCTCCGAAAGAGTTTTGAGGAAAATGAGTAAATTGACATTTTTTGCTGCTGCAAAAGTTTTATCATCATTTCCTCCTCTTGATCTTCCAGAGATTGCATTTGCAGGAAGGTCAAATGTTGGGAAATCGTCACTACTTAACGCACTCACCAGAAATTGGGATGTTGCACGAACATCAGATAAGCCTCGTCTTACACAGACTCGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MMR_HSR1

Protein Analysis

473

Amino Acids

54.22

Weight (kDa)

10.14

Isoelectric Point (pI)

59.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MMR_HSR1 PF01926 436 - 472 2.3e-08 50S ribosome-binding GTPase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 474
AccB1I GGYRCC 1 cut(s) 301
AccB7I CCANNNNNTGG 1 cut(s) 1371
AccII CGCG 2 cut(s) 36, 673
AciI CCGC 2 cut(s) 36, 406
AclI AACGTT 3 cut(s) 571, 721, 751
AclWI GGATC 3 cut(s) 20, 940, 974
AcsI RAATTY 3 cut(s) 130, 617, 969
AcuI CTGAAG 5 cut(s) 127, 177, 234, 848, 1175
AfiI CCNNNNNNNGG 2 cut(s) 35, 1371
AgsI TTSAA 8 cut(s) 61, 97, 117, 130, 136, 346, 996, 1151
AjiI CACGTC 1 cut(s) 392
AjnI CCWGG 1 cut(s) 147
AluBI AGCT 4 cut(s) 126, 275, 1180, 1218
AluI AGCT 4 cut(s) 126, 275, 1180, 1218
Alw26I GTCTC 1 cut(s) 425
AlwI GGATC 3 cut(s) 20, 940, 974
ApeKI GCWGC 3 cut(s) 272, 1262, 1265
ApoI RAATTY 3 cut(s) 130, 617, 969
AseI ATTAAT 1 cut(s) 360
Asp700I GAANNNNTTC 1 cut(s) 178
AsuHPI GGTGA 1 cut(s) 1354
AxyI CCTNAGG 1 cut(s) 732
BanI GGYRCC 1 cut(s) 301
BanII GRGCYC 1 cut(s) 155
BarI GAAGNNNNNNTAC 6 cut(s) 370, 402, 496, 528, 652, 684
BbvI GCAGC 3 cut(s) 284, 1249, 1252
BccI CCATC 4 cut(s) 536, 781, 803, 941
BceAI ACGGC 1 cut(s) 70
BciT130I CCWGG 1 cut(s) 149
BcoDI GTCTC 1 cut(s) 425
BfaI CTAG 2 cut(s) 944, 977
BfmI CTRYAG 1 cut(s) 373
BglII AGATCT 2 cut(s) 380, 662
BisI GCNGC 3 cut(s) 273, 1263, 1266
BlsI GCNGC 3 cut(s) 274, 1264, 1267
Bme1390I CCNGG 1 cut(s) 149
BmgBI CACGTC 1 cut(s) 392
BmiI GGNNCC 1 cut(s) 303
BmrFI CCNGG 1 cut(s) 149
BmsI GCATC 1 cut(s) 259
BpmI CTGGAG 1 cut(s) 37
BsaJI CCNNGG 3 cut(s) 148, 450, 582
BsaWI WCCGGW 1 cut(s) 105
Bsc4I CCNNNNNNNGG 2 cut(s) 35, 1371
Bse1I ACTGG 1 cut(s) 20
Bse21I CCTNAGG 1 cut(s) 732
Bse3DI GCAATG 2 cut(s) 493, 710
BseBI CCWGG 1 cut(s) 149
BseDI CCNNGG 3 cut(s) 148, 450, 582
BseGI GGATG 3 cut(s) 781, 931, 1381
BseLI CCNNNNNNNGG 2 cut(s) 35, 1371
BseMI GCAATG 2 cut(s) 493, 710
BseMII CTCAG 3 cut(s) 420, 1062, 1167
BseNI ACTGG 1 cut(s) 20
BseRI GAGGAG 2 cut(s) 311, 1281
BseXI GCAGC 3 cut(s) 284, 1249, 1252
BsgI GTGCAG 1 cut(s) 1170
Bsh1236I CGCG 2 cut(s) 36, 673
BshNI GGYRCC 1 cut(s) 301
BsiSI CCGG 1 cut(s) 106
BslFI GGGAC 1 cut(s) 504
BslI CCNNNNNNNGG 2 cut(s) 35, 1371
BsmAI GTCTC 1 cut(s) 425
BsmFI GGGAC 1 cut(s) 504
BsmI GAATGC 1 cut(s) 559
Bsp1286I GDGCHC 1 cut(s) 155
Bsp143I GATC 7 cut(s) 25, 262, 380, 662, 932, 979, 1297
BspACI CCGC 2 cut(s) 36, 406
BspCNI CTCAG 3 cut(s) 421, 1063, 1168
BspFNI CGCG 2 cut(s) 36, 673
BspLI GGNNCC 1 cut(s) 303
BspPI GGATC 3 cut(s) 20, 940, 974
BspT107I GGYRCC 1 cut(s) 301
BsrDI GCAATG 2 cut(s) 493, 710
BsrI ACTGG 1 cut(s) 20
BssECI CCNNGG 3 cut(s) 148, 450, 582
BssMI GATC 7 cut(s) 25, 262, 380, 662, 932, 979, 1297
BssT1I CCWWGG 2 cut(s) 450, 582
Bst2UI CCWGG 1 cut(s) 149
Bst4CI ACNGT 5 cut(s) 45, 290, 377, 441, 892
Bst6I CTCTTC 3 cut(s) 242, 885, 1151
BstC8I GCNNGC 1 cut(s) 1165
BstDEI CTNAG 5 cut(s) 429, 528, 732, 1071, 1176
BstF5I GGATG 3 cut(s) 781, 931, 1381
BstFNI CGCG 2 cut(s) 36, 673
BstKTI GATC 7 cut(s) 28, 265, 383, 665, 935, 982, 1300
BstMAI GTCTC 1 cut(s) 425
BstMBI GATC 7 cut(s) 25, 262, 380, 662, 932, 979, 1297
BstMWI GCNNNNNNNGC 1 cut(s) 281
BstNI CCWGG 1 cut(s) 149
BstSCI CCNGG 1 cut(s) 147
BstSFI CTRYAG 1 cut(s) 373
BstUI CGCG 2 cut(s) 36, 673
BstV1I GCAGC 3 cut(s) 284, 1249, 1252
BstX2I RGATCY 3 cut(s) 380, 662, 979
BstYI RGATCY 3 cut(s) 380, 662, 979
Bsu36I CCTNAGG 1 cut(s) 732
BtrI CACGTC 1 cut(s) 392
BtsCI GGATG 3 cut(s) 781, 931, 1381
BtsI GCAGTG 1 cut(s) 28
BtsIMutI CAGTG 3 cut(s) 28, 824, 1173
Cac8I GCNNGC 1 cut(s) 1165
CseI GACGC 1 cut(s) 662
CviAII CATG 2 cut(s) 687, 1041
DdeI CTNAG 5 cut(s) 429, 528, 732, 1071, 1176
DpnI GATC 7 cut(s) 27, 264, 382, 664, 934, 981, 1299
DpnII GATC 7 cut(s) 25, 262, 380, 662, 932, 979, 1297
Eam1104I CTCTTC 3 cut(s) 242, 885, 1151
EarI CTCTTC 3 cut(s) 242, 885, 1151
Eco130I CCWWGG 2 cut(s) 450, 582
Eco24I GRGCYC 1 cut(s) 155
Eco32I GATATC 1 cut(s) 1077
Eco57I CTGAAG 5 cut(s) 127, 177, 234, 848, 1175
Eco81I CCTNAGG 1 cut(s) 732
EcoRII CCWGG 1 cut(s) 147
EcoRV GATATC 1 cut(s) 1077
EcoT14I CCWWGG 2 cut(s) 450, 582
EcoT38I GRGCYC 1 cut(s) 155
ErhI CCWWGG 2 cut(s) 450, 582
FaeI CATG 2 cut(s) 690, 1044
FaqI GGGAC 1 cut(s) 504
FatI CATG 2 cut(s) 686, 1040
FauI CCCGC 1 cut(s) 399
Fnu4HI GCNGC 3 cut(s) 273, 1263, 1266
FokI GGATG 3 cut(s) 788, 938, 1388
FriOI GRGCYC 1 cut(s) 155
Fsp4HI GCNGC 3 cut(s) 273, 1263, 1266
FspBI CTAG 2 cut(s) 944, 977
GluI GCNGC 3 cut(s) 273, 1263, 1266
GsuI CTGGAG 1 cut(s) 37
HapII CCGG 1 cut(s) 106
HgaI GACGC 1 cut(s) 662
Hin1II CATG 2 cut(s) 690, 1044
HinfI GANTC 6 cut(s) 102, 113, 252, 337, 791, 1414
HpaII CCGG 1 cut(s) 106
HphI GGTGA 1 cut(s) 1354
Hpy166II GTNNAC 2 cut(s) 41, 604
Hpy188III TCNNGA 4 cut(s) 266, 1007, 1295, 1304
Hpy8I GTNNAC 2 cut(s) 41, 604
HpyAV CCTTC 6 cut(s) 237, 307, 396, 522, 923, 1317
HpyCH4III ACNGT 5 cut(s) 45, 290, 377, 441, 892
HpyCH4IV ACGT 5 cut(s) 391, 571, 721, 751, 1003
HpyF10VI GCNNNNNNNGC 1 cut(s) 281
HpyF3I CTNAG 5 cut(s) 429, 528, 732, 1071, 1176
HpySE526I ACGT 5 cut(s) 391, 571, 721, 751, 1003
Hsp92II CATG 2 cut(s) 690, 1044
Kzo9I GATC 7 cut(s) 25, 262, 380, 662, 932, 979, 1297
LmnI GCTCC 2 cut(s) 18, 1223
LpnPI CCDG 9 cut(s) 38, 119, 134, 161, 864, 1149, 1305, 1317, 1378
Lsp1109I GCAGC 3 cut(s) 284, 1249, 1252
LweI GCATC 1 cut(s) 259
MaeI CTAG 2 cut(s) 944, 977
MaeII ACGT 5 cut(s) 391, 571, 721, 751, 1003
MaeIII GTNAC 2 cut(s) 398, 1344
MalI GATC 7 cut(s) 27, 264, 382, 664, 934, 981, 1299
MboI GATC 7 cut(s) 25, 262, 380, 662, 932, 979, 1297
MfeI CAATTG 1 cut(s) 341
MflI RGATCY 3 cut(s) 380, 662, 979
MhlI GDGCHC 1 cut(s) 155
MluCI AATT 9 cut(s) 30, 130, 341, 617, 634, 969, 1091, 1247, 1369
MlyI GAGTC 2 cut(s) 111, 1408
MmeI TCCRAC 2 cut(s) 794, 1129
MroXI GAANNNNTTC 1 cut(s) 178
MseI TTAA 6 cut(s) 360, 621, 648, 771, 1053, 1353
MspI CCGG 1 cut(s) 106
MspR9I CCNGG 1 cut(s) 149
MunI CAATTG 1 cut(s) 341
Mva1269I GAATGC 1 cut(s) 559
MvaI CCWGG 1 cut(s) 149
MvnI CGCG 2 cut(s) 36, 673
MwoI GCNNNNNNNGC 1 cut(s) 281
NdeII GATC 7 cut(s) 25, 262, 380, 662, 932, 979, 1297
NlaIII CATG 2 cut(s) 690, 1044
NlaIV GGNNCC 1 cut(s) 303
NmuCI GTSAC 1 cut(s) 1344
PctI GAATGC 1 cut(s) 559
PdmI GAANNNNTTC 1 cut(s) 178
PfeI GAWTC 4 cut(s) 113, 252, 337, 791
PflMI CCANNNNNTGG 1 cut(s) 1371
PkrI GCNGC 3 cut(s) 274, 1264, 1267
PleI GAGTC 2 cut(s) 110, 1408
PpsI GAGTC 2 cut(s) 110, 1408
PshBI ATTAAT 1 cut(s) 360
PsiI TTATAA 1 cut(s) 474
Psp1406I AACGTT 3 cut(s) 571, 721, 751
Psp6I CCWGG 1 cut(s) 147
PspGI CCWGG 1 cut(s) 147
PspN4I GGNNCC 1 cut(s) 303
PsuI RGATCY 3 cut(s) 380, 662, 979
SaqAI TTAA 6 cut(s) 360, 621, 648, 771, 1053, 1353
SatI GCNGC 3 cut(s) 273, 1263, 1266
Sau3AI GATC 7 cut(s) 25, 262, 380, 662, 932, 979, 1297
SchI GAGTC 2 cut(s) 111, 1408
ScrFI CCNGG 1 cut(s) 149
SduI GDGCHC 1 cut(s) 155
SfaNI GCATC 1 cut(s) 259
SfcI CTRYAG 1 cut(s) 373
Sse9I AATT 9 cut(s) 30, 130, 341, 617, 634, 969, 1091, 1247, 1369
SsiI CCGC 2 cut(s) 36, 406
SspI AATATT 1 cut(s) 646
SspMI CTAG 2 cut(s) 944, 977
StyD4I CCNGG 1 cut(s) 147
StyI CCWWGG 2 cut(s) 450, 582
TaaI ACNGT 5 cut(s) 45, 290, 377, 441, 892
TaiI ACGT 5 cut(s) 394, 574, 724, 754, 1006
TaqI TCGA 3 cut(s) 265, 973, 1134
TasI AATT 9 cut(s) 30, 130, 341, 617, 634, 969, 1091, 1247, 1369
TfiI GAWTC 4 cut(s) 113, 252, 337, 791
Tru1I TTAA 6 cut(s) 360, 621, 648, 771, 1053, 1353
Tru9I TTAA 6 cut(s) 360, 621, 648, 771, 1053, 1353
TscAI CASTG 3 cut(s) 28, 831, 1180
TseFI GTSAC 1 cut(s) 1344
TseI GCWGC 3 cut(s) 272, 1262, 1265
Tsp45I GTSAC 1 cut(s) 1344
TspDTI ATGAA 5 cut(s) 194, 504, 624, 942, 1029
TspGWI ACGGA 2 cut(s) 235, 922
TspRI CASTG 3 cut(s) 28, 831, 1180
Van91I CCANNNNNTGG 1 cut(s) 1371
VspI ATTAAT 1 cut(s) 360
XapI RAATTY 3 cut(s) 130, 617, 969
XmnI GAANNNNTTC 1 cut(s) 178
XspI CTAG 2 cut(s) 944, 977
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.