Rmu_sc0014417.1_g000009

Bifunctional dihydroflavonol 4-reductase flavanone

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014417.1
Physical Location & Seq
Reverse (-)
28894 .. 33876
4983 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014417.1_g000009.1.cds

Sequence Viewer

Length: 1470 bp
atggcatcggaatccgagtccgtttgcgtgacaggcgcctccggtttcataggttcatggctcgtcatgagactcctagaccgcggctacactgtccgagccaccgtgcgagaccctgctaataagaagaaggtgaaccatctgctggacttaccaaaggcggcgactcacttgacgctgtggaaggcagacctggcggaggagggaagcttcgacgaggccatcaagggatgcaccggagtgttccatgtcgccactcctatggattttgagtccaaggaccctgagaacgaagtgatcaaacctactataaatggggtgctagacatcatgcaagcatgtctaaaagcaaagactgttagaaggctagtgtttacatcttcggctggatctgtcaatgttgaagagacccaaaagccggtctacaacgaaagcaactggagtgatgtcgaattttgccggagagtgaagatgactggttggatgtattttgcatccaaaactctagctgagcaagaggcatggaagtttgccaaagaaaataacattgatttcatcaccattatcccaactctcgtaatcggtccatttctcatgccttccatgccgccgagcctcattactggactttcgccactcactggaaatgaaagtcattattcgatcataaagcaaggccaattcattcatctagacgacctctgccaatctcatatatacttgtatgagcatccgaaagcagagggccgctacatttgttcatcgcacgatgctacgattcatgaaattgcgaaattgctgaaggaaaagtaccccgagtacaatgttcctacaacgttcaagggcattgaggagaacttgccaaaggtccatttttcttcaaagaaattattggaaacagggttcgagttcaaatacagcttggaggacatgtttgtaggagctgttgatgcttgtaaagcaaagggtttgcttcctcctcctactgaaagagttgaaaagcaggaggttgatgagagcagtgtcgtccgtgtcaaaatgccgcataagtctctcgatctccctctaacgctgcctcacttgcctctcatcacgaatgactggttagtcgtgaaacgaggatgggatgcccaagttctcggtgaagccccctataaatttaagaacgttgttgaagctatcaagacattgagagtagaaccaaatgccaatgaccagtatctacctccttttgttattgttgatgacagtggaaagcctgtgggcccaataattgatggtgctgctgttgtaacattcaacttccgagcagatcgtatggcaaaggatgctattctgagcaagaagtttgaacaggtacgtgttaacctacccaatggggacatggtggggcatactggtgacattgaggccacaattgttgcttgcaaggctgctaatcaagctgtcaagatgattcttgatgggtag

Protein Analysis

489

Amino Acids

54.42

Weight (kDa)

6.05

Isoelectric Point (pI)

40.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1106
AccB1I GGYRCC 1 cut(s) 35
AccB7I CCANNNNNTGG 2 cut(s) 145, 641
AccI GTMKAC 1 cut(s) 423
AccII CGCG 1 cut(s) 84
AciI CCGC 7 cut(s) 82, 84, 161, 197, 608, 748, 1043
AclI AACGTT 2 cut(s) 836, 1167
AclWI GGATC 1 cut(s) 397
AcsI RAATTY 2 cut(s) 452, 1157
AcuI CTGAAG 1 cut(s) 821
AcyI GRCGYC 1 cut(s) 36
AfaI GTAC 3 cut(s) 812, 821, 1359
AfiI CCNNNNNNNGG 4 cut(s) 145, 199, 418, 641
AflIII ACRYGT 2 cut(s) 930, 1360
AgsI TTSAA 8 cut(s) 404, 841, 882, 913, 998, 1175, 1300, 1352
AjnI CCWGG 1 cut(s) 192
AleI CACNNNNGTG 1 cut(s) 239
AloI GAACNNNNNNTCC 2 cut(s) 887, 919
AluBI AGCT 6 cut(s) 210, 509, 921, 944, 1178, 1445
AluI AGCT 6 cut(s) 210, 509, 921, 944, 1178, 1445
Alw26I GTCTC 4 cut(s) 64, 105, 401, 1056
AlwI GGATC 1 cut(s) 397
Ama87I CYCGRG 1 cut(s) 815
AoxI GGCC 5 cut(s) 219, 676, 745, 1264, 1410
ApaI GGGCCC 1 cut(s) 1268
ApeKI GCWGC 3 cut(s) 1072, 1283, 1433
ApoI RAATTY 2 cut(s) 452, 1157
AspLEI GCGC 1 cut(s) 38
AspS9I GGNCC 6 cut(s) 280, 584, 745, 868, 1264, 1265
AsuHPI GGTGA 4 cut(s) 145, 550, 1154, 1412
AvaI CYCGRG 1 cut(s) 815
AvaII GGWCC 3 cut(s) 280, 584, 868
BaeGI GKGCMC 1 cut(s) 1268
BanI GGYRCC 1 cut(s) 35
BanII GRGCYC 1 cut(s) 1268
BarI GAAGNNNNNNTAC 2 cut(s) 794, 826
BbvI GCAGC 3 cut(s) 1059, 1270, 1420
BccI CCATC 5 cut(s) 147, 230, 1116, 1271, 1457
BciT130I CCWGG 1 cut(s) 194
BclI TGATCA 1 cut(s) 297
BcoDI GTCTC 4 cut(s) 64, 105, 401, 1056
BfaI CTAG 5 cut(s) 77, 323, 368, 506, 692
BfoI RGCGCY 1 cut(s) 39
BisI GCNGC 8 cut(s) 85, 162, 608, 748, 1043, 1073, 1284, 1434
BlpI GCTNAGC 1 cut(s) 510
BlsI GCNGC 8 cut(s) 86, 163, 609, 749, 1044, 1074, 1285, 1435
Bme1390I CCNGG 1 cut(s) 194
Bme18I GGWCC 3 cut(s) 280, 584, 868
BmeT110I CYCGRG 1 cut(s) 815
BmgT120I GGNCC 6 cut(s) 280, 584, 745, 868, 1264, 1265
BmiI GGNNCC 3 cut(s) 37, 282, 1266
BmrFI CCNGG 1 cut(s) 194
BmsI GCATC 8 cut(s) 14, 221, 503, 739, 760, 940, 1117, 1318
BpmI CTGGAG 1 cut(s) 460
Bpu1102I GCTNAGC 1 cut(s) 510
BsaAI YACGTR 1 cut(s) 1361
BsaHI GRCGYC 1 cut(s) 36
BsaI GGTCTC 2 cut(s) 105, 401
BsaJI CCNNGG 2 cut(s) 82, 276
BsaWI WCCGGW 2 cut(s) 41, 236
BsaXI ACNNNNNCTCC 2 cut(s) 917, 947
Bsc4I CCNNNNNNNGG 4 cut(s) 145, 199, 418, 641
Bse118I RCCGGY 1 cut(s) 418
Bse1I ACTGG 7 cut(s) 443, 481, 628, 646, 1106, 1216, 1402
BseBI CCWGG 1 cut(s) 194
BseDI CCNNGG 2 cut(s) 82, 276
BseGI GGATG 7 cut(s) 236, 489, 494, 730, 1127, 1132, 1333
BseLI CCNNNNNNNGG 4 cut(s) 145, 199, 418, 641
BseMII CTCAG 3 cut(s) 276, 501, 1328
BseNI ACTGG 7 cut(s) 443, 481, 628, 646, 1106, 1216, 1402
BseRI GAGGAG 3 cut(s) 215, 866, 969
BseSI GKGCMC 1 cut(s) 1268
BseXI GCAGC 3 cut(s) 1059, 1270, 1420
Bsh1236I CGCG 1 cut(s) 84
BshFI GGCC 5 cut(s) 221, 678, 747, 1266, 1412
BshNI GGYRCC 1 cut(s) 35
BsiHKCI CYCGRG 1 cut(s) 815
BsiSI CCGG 4 cut(s) 42, 237, 419, 460
BslFI GGGAC 1 cut(s) 1394
BslI CCNNNNNNNGG 4 cut(s) 145, 199, 418, 641
BsmAI GTCTC 4 cut(s) 64, 105, 401, 1056
BsmFI GGGAC 1 cut(s) 1394
BsnI GGCC 5 cut(s) 221, 678, 747, 1266, 1412
Bso31I GGTCTC 2 cut(s) 105, 401
BsoBI CYCGRG 1 cut(s) 815
Bsp120I GGGCCC 1 cut(s) 1264
Bsp1286I GDGCHC 1 cut(s) 1268
Bsp143I GATC 5 cut(s) 297, 389, 663, 1057, 1312
Bsp1720I GCTNAGC 1 cut(s) 510
BspACI CCGC 7 cut(s) 82, 84, 161, 197, 608, 748, 1043
BspANI GGCC 5 cut(s) 221, 678, 747, 1266, 1412
BspCNI CTCAG 3 cut(s) 277, 502, 1329
BspFNI CGCG 1 cut(s) 84
BspHI TCATGA 2 cut(s) 66, 781
BspLI GGNNCC 3 cut(s) 37, 282, 1266
BspPI GGATC 1 cut(s) 397
BspT107I GGYRCC 1 cut(s) 35
BspTNI GGTCTC 2 cut(s) 105, 401
BsrFI RCCGGY 1 cut(s) 418
BsrI ACTGG 7 cut(s) 443, 481, 628, 646, 1106, 1216, 1402
BssAI RCCGGY 1 cut(s) 418
BssECI CCNNGG 2 cut(s) 82, 276
BssMI GATC 5 cut(s) 297, 389, 663, 1057, 1312
BssNI GRCGYC 1 cut(s) 36
BssT1I CCWWGG 1 cut(s) 276
Bst2UI CCWGG 1 cut(s) 194
Bst4CI ACNGT 4 cut(s) 94, 106, 358, 1250
Bst6I CTCTTC 1 cut(s) 399
BstACI GRCGYC 1 cut(s) 36
BstAPI GCANNNNNTGC 1 cut(s) 1328
BstBAI YACGTR 1 cut(s) 1361
BstC8I GCNNGC 2 cut(s) 336, 1426
BstDEI CTNAG 3 cut(s) 285, 510, 1337
BstDSI CCRYGG 1 cut(s) 82
BstENI CCTNNNNNAGG 1 cut(s) 197
BstF5I GGATG 7 cut(s) 236, 489, 494, 730, 1127, 1132, 1333
BstFNI CGCG 1 cut(s) 84
BstH2I RGCGCY 1 cut(s) 39
BstHHI GCGC 1 cut(s) 38
BstKTI GATC 5 cut(s) 300, 392, 666, 1060, 1315
BstMAI GTCTC 4 cut(s) 64, 105, 401, 1056
BstMBI GATC 5 cut(s) 297, 389, 663, 1057, 1312
BstMWI GCNNNNNNNGC 9 cut(s) 33, 194, 604, 950, 959, 1081, 1328, 1430, 1442
BstNI CCWGG 1 cut(s) 194
BstNSI RCATGY 2 cut(s) 342, 934
BstSCI CCNGG 1 cut(s) 192
BstSLI GKGCMC 1 cut(s) 1268
BstUI CGCG 1 cut(s) 84
BstV1I GCAGC 3 cut(s) 1059, 1270, 1420
BstX2I RGATCY 1 cut(s) 389
BstXI CCANNNNNNTGG 1 cut(s) 262
BstYI RGATCY 1 cut(s) 389
BsuRI GGCC 5 cut(s) 221, 678, 747, 1266, 1412
BtgI CCRYGG 1 cut(s) 82
BtgZI GCGATG 1 cut(s) 747
BtsCI GGATG 7 cut(s) 236, 489, 494, 730, 1127, 1132, 1333
BtsI GCAGTG 1 cut(s) 1027
BtsIMutI CAGTG 4 cut(s) 90, 639, 1027, 1255
Cac8I GCNNGC 2 cut(s) 336, 1426
CciI TCATGA 2 cut(s) 66, 781
CfoI GCGC 1 cut(s) 38
Cfr10I RCCGGY 1 cut(s) 418
Cfr13I GGNCC 6 cut(s) 280, 584, 745, 868, 1264, 1265
Cfr42I CCGCGG 1 cut(s) 85
CseI GACGC 1 cut(s) 184
Csp6I GTAC 3 cut(s) 811, 820, 1358
CspCI CAANNNNNGTGG 2 cut(s) 1402, 1437
CviQI GTAC 3 cut(s) 811, 820, 1358
DdeI CTNAG 3 cut(s) 285, 510, 1337
DinI GGCGCC 1 cut(s) 37
DpnI GATC 5 cut(s) 299, 391, 665, 1059, 1314
DpnII GATC 5 cut(s) 297, 389, 663, 1057, 1312
DrdI GACNNNNNNGTC 1 cut(s) 1106
DseDI GACNNNNNNGTC 1 cut(s) 1106
Eam1104I CTCTTC 1 cut(s) 399
EarI CTCTTC 1 cut(s) 399
EciI GGCGGA 1 cut(s) 212
Eco130I CCWWGG 1 cut(s) 276
Eco24I GRGCYC 1 cut(s) 1268
Eco31I GGTCTC 2 cut(s) 105, 401
Eco47I GGWCC 3 cut(s) 280, 584, 868
Eco57I CTGAAG 1 cut(s) 821
Eco88I CYCGRG 1 cut(s) 815
EcoNI CCTNNNNNAGG 1 cut(s) 197
EcoO109I RGGNCCY 1 cut(s) 280
EcoRII CCWGG 1 cut(s) 192
EcoT14I CCWWGG 1 cut(s) 276
EcoT38I GRGCYC 1 cut(s) 1268
EgeI GGCGCC 1 cut(s) 37
EheI GGCGCC 1 cut(s) 37
ErhI CCWWGG 1 cut(s) 276
FaqI GGGAC 1 cut(s) 1394
FbaI TGATCA 1 cut(s) 297
FblI GTMKAC 1 cut(s) 423
Fnu4HI GCNGC 8 cut(s) 85, 162, 608, 748, 1043, 1073, 1284, 1434
FokI GGATG 7 cut(s) 243, 481, 496, 717, 1134, 1139, 1340
FriOI GRGCYC 1 cut(s) 1268
Fsp4HI GCNGC 8 cut(s) 85, 162, 608, 748, 1043, 1073, 1284, 1434
FspBI CTAG 5 cut(s) 77, 323, 368, 506, 692
GlaI GCGC 1 cut(s) 37
GluI GCNGC 8 cut(s) 85, 162, 608, 748, 1043, 1073, 1284, 1434
GsuI CTGGAG 1 cut(s) 460
HaeII RGCGCY 1 cut(s) 39
HaeIII GGCC 5 cut(s) 221, 678, 747, 1266, 1412
HapII CCGG 4 cut(s) 42, 237, 419, 460
HgaI GACGC 1 cut(s) 184
HhaI GCGC 1 cut(s) 38
Hin1I GRCGYC 1 cut(s) 36
Hin6I GCGC 1 cut(s) 36
HinP1I GCGC 1 cut(s) 36
HincII GTYRAC 1 cut(s) 1366
HindII GTYRAC 1 cut(s) 1366
HindIII AAGCTT 1 cut(s) 208
HinfI GANTC 7 cut(s) 11, 17, 72, 166, 272, 778, 1456
HpaI GTTAAC 1 cut(s) 1366
HpaII CCGG 4 cut(s) 42, 237, 419, 460
HphI GGTGA 4 cut(s) 145, 550, 1154, 1412
Hpy166II GTNNAC 4 cut(s) 136, 375, 424, 1366
Hpy188I TCNGA 6 cut(s) 10, 16, 98, 735, 1307, 1338
Hpy188III TCNNGA 9 cut(s) 67, 692, 782, 1055, 1093, 1111, 1183, 1450, 1460
Hpy8I GTNNAC 4 cut(s) 136, 375, 424, 1366
Hpy99I CGWCG 1 cut(s) 218
HpyAV CCTTC 5 cut(s) 124, 178, 357, 609, 796
HpyCH4III ACNGT 4 cut(s) 94, 106, 358, 1250
HpyCH4IV ACGT 3 cut(s) 836, 1167, 1360
HpyCH4V TGCA 4 cut(s) 234, 334, 494, 1428
HpyF10VI GCNNNNNNNGC 9 cut(s) 33, 194, 604, 950, 959, 1081, 1328, 1430, 1442
HpyF3I CTNAG 3 cut(s) 285, 510, 1337
HpySE526I ACGT 3 cut(s) 836, 1167, 1360
Hsp92I GRCGYC 1 cut(s) 36
HspAI GCGC 1 cut(s) 36
KasI GGCGCC 1 cut(s) 35
Ksp22I TGATCA 1 cut(s) 297
KspAI GTTAAC 1 cut(s) 1366
KspI CCGCGG 1 cut(s) 85
Kzo9I GATC 5 cut(s) 297, 389, 663, 1057, 1312
LmnI GCTCC 1 cut(s) 941
Lsp1109I GCAGC 3 cut(s) 1059, 1270, 1420
LweI GCATC 8 cut(s) 14, 221, 503, 739, 760, 940, 1117, 1318
MaeI CTAG 5 cut(s) 77, 323, 368, 506, 692
MaeII ACGT 3 cut(s) 836, 1167, 1360
MaeIII GTNAC 3 cut(s) 28, 1291, 1400
MalI GATC 5 cut(s) 299, 391, 665, 1059, 1314
MboI GATC 5 cut(s) 297, 389, 663, 1057, 1312
MboII GAAGA 5 cut(s) 139, 372, 416, 481, 870
MfeI CAATTG 1 cut(s) 1416
MflI RGATCY 1 cut(s) 389
MhlI GDGCHC 1 cut(s) 1268
MluCI AATT 8 cut(s) 452, 680, 786, 794, 887, 1157, 1272, 1416
Mly113I GGCGCC 1 cut(s) 36
MlyI GAGTC 4 cut(s) 26, 66, 160, 281
MmeI TCCRAC 1 cut(s) 461
MseI TTAA 2 cut(s) 1161, 1365
MslI CAYNNNNRTG 3 cut(s) 239, 260, 1398
MspA1I CMGCKG 1 cut(s) 84
MspI CCGG 4 cut(s) 42, 237, 419, 460
MspR9I CCNGG 1 cut(s) 194
MunI CAATTG 1 cut(s) 1416
MvaI CCWGG 1 cut(s) 194
MvnI CGCG 1 cut(s) 84
MwoI GCNNNNNNNGC 9 cut(s) 33, 194, 604, 950, 959, 1081, 1328, 1430, 1442
NarI GGCGCC 1 cut(s) 36
NdeII GATC 5 cut(s) 297, 389, 663, 1057, 1312
NlaIV GGNNCC 3 cut(s) 37, 282, 1266
NmeAIII GCCGAG 1 cut(s) 636
NmuCI GTSAC 2 cut(s) 28, 1400
NspI RCATGY 2 cut(s) 342, 934
OliI CACNNNNGTG 1 cut(s) 239
PagI TCATGA 2 cut(s) 66, 781
PciI ACATGT 1 cut(s) 930
PfeI GAWTC 3 cut(s) 11, 778, 1456
PflMI CCANNNNNTGG 2 cut(s) 145, 641
PkrI GCNGC 8 cut(s) 86, 163, 609, 749, 1044, 1074, 1285, 1435
PleI GAGTC 4 cut(s) 25, 66, 160, 280
PluTI GGCGCC 1 cut(s) 39
PpsI GAGTC 4 cut(s) 25, 66, 160, 280
Ppu21I YACGTR 1 cut(s) 1361
PpuMI RGGWCCY 1 cut(s) 280
PscI ACATGT 1 cut(s) 930
Psp1406I AACGTT 2 cut(s) 836, 1167
Psp5II RGGWCCY 1 cut(s) 280
Psp6I CCWGG 1 cut(s) 192
PspGI CCWGG 1 cut(s) 192
PspN4I GGNNCC 3 cut(s) 37, 282, 1266
PspOMI GGGCCC 1 cut(s) 1264
PspPI GGNCC 6 cut(s) 280, 584, 745, 868, 1264, 1265
PspPPI RGGWCCY 1 cut(s) 280
PsuI RGATCY 1 cut(s) 389
RsaI GTAC 3 cut(s) 812, 821, 1359
RsaNI GTAC 3 cut(s) 811, 820, 1358
RseI CAYNNNNRTG 3 cut(s) 239, 260, 1398
SacII CCGCGG 1 cut(s) 85
SaqAI TTAA 2 cut(s) 1161, 1365
SatI GCNGC 8 cut(s) 85, 162, 608, 748, 1043, 1073, 1284, 1434
Sau3AI GATC 5 cut(s) 297, 389, 663, 1057, 1312
Sau96I GGNCC 6 cut(s) 280, 584, 745, 868, 1264, 1265
SchI GAGTC 4 cut(s) 26, 66, 160, 281
ScrFI CCNGG 1 cut(s) 194
SduI GDGCHC 1 cut(s) 1268
SfaNI GCATC 8 cut(s) 14, 221, 503, 739, 760, 940, 1117, 1318
SfoI GGCGCC 1 cut(s) 37
Sfr303I CCGCGG 1 cut(s) 85
SgrBI CCGCGG 1 cut(s) 85
SinI GGWCC 3 cut(s) 280, 584, 868
SmiMI CAYNNNNRTG 3 cut(s) 239, 260, 1398
Sse9I AATT 8 cut(s) 452, 680, 786, 794, 887, 1157, 1272, 1416
SsiI CCGC 7 cut(s) 82, 84, 161, 197, 608, 748, 1043
SspDI GGCGCC 1 cut(s) 35
SspMI CTAG 5 cut(s) 77, 323, 368, 506, 692
StyD4I CCNGG 1 cut(s) 192
StyI CCWWGG 1 cut(s) 276
TaaI ACNGT 4 cut(s) 94, 106, 358, 1250
TaiI ACGT 3 cut(s) 839, 1170, 1363
TaqI TCGA 5 cut(s) 213, 450, 662, 906, 1056
TaqII GACCGA 1 cut(s) 572
TasI AATT 8 cut(s) 452, 680, 786, 794, 887, 1157, 1272, 1416
TatI WGTACW 1 cut(s) 819
TauI GCSGC 5 cut(s) 87, 164, 610, 750, 1045
TfiI GAWTC 3 cut(s) 11, 778, 1456
Tru1I TTAA 2 cut(s) 1161, 1365
Tru9I TTAA 2 cut(s) 1161, 1365
TscAI CASTG 4 cut(s) 97, 646, 1027, 1255
TseFI GTSAC 2 cut(s) 28, 1400
TseI GCWGC 3 cut(s) 1072, 1283, 1433
Tsp45I GTSAC 2 cut(s) 28, 1400
TspDTI ATGAA 9 cut(s) 37, 45, 544, 663, 673, 677, 750, 770, 798
TspGWI ACGGA 2 cut(s) 10, 1019
TspRI CASTG 4 cut(s) 97, 646, 1027, 1255
Van91I CCANNNNNTGG 2 cut(s) 145, 641
VpaK11BI GGWCC 3 cut(s) 280, 584, 868
XagI CCTNNNNNAGG 1 cut(s) 197
XapI RAATTY 2 cut(s) 452, 1157
XbaI TCTAGA 1 cut(s) 691
XceI RCATGY 2 cut(s) 342, 934
XcmI CCANNNNNNNNNTGG 1 cut(s) 1381
XmiI GTMKAC 1 cut(s) 423
XspI CTAG 5 cut(s) 77, 323, 368, 506, 692
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.