Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0002221

Physical Location & Seq

Genomic Coordinates Forward (+)

86459193 .. 86461631

Gene Structure 2439 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00064630.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1365 bp

ATGGATGAAGTTCAAGGCGTTTCTGGATCTTTACCTCCTTTTCTTTCGAAGACATATGAAATGGTGGATGATTGTTCGACTGATTCGATTGTGTCTTGGAGTGCGAGTAATAGAAGCTTCATTGTCCGGAACCCTCCGGAGTTTGCCAGAGATTTGTTGCCAAAGTATTTTAAGCACAACAACTTCTCTAGCTTTATTAGGCAGCTCAACACATATGGTTTCCGAAAGATTGATCCGGAGCAATGGGAATTCGCGAATGATGATTTTGTTAGAGGTCAGCCACAGCTTATGAAGAACATCCATAGAAGAAAGCCGGTGCATAGTCATTCTGTGCCGAACCTCCAGGTCCAAGGACAAGGACAAGGACAAGGGAGTTCATCGTTGTCTGAAGCTGAAAGGAAGAGTATGAAGGATGAGATTGAGAGGCTTAACCATGAAAAAGGACGCCTTGCGGTGGAGTTAGAGAGGCATGAGCAGGAAAGGCAGGGAATGGAGTTGCAAATGCAGTTCTTGAAGGACCGCTTGCAACATATGCAACGGCAGCAGCAAACCATGGCGTCTGTTGTGGCTCGAGTTTTGCAGAGACCAGACATTGCCTTGAATCCTGTACCGCAGTTTGAACTCCGTGGCCGGAAGAGGACGTTTTCAAGTGTCGATTTGGCCTATGATCAGGTCAGCATCGGAAGTGGTCAGATGGGGAGTCAGGAAAATGTAACTAGAGGAAGTATGGAGACGGGAAAGGTACTGCAATTGGAGTCATTCCTGACATTTTGGGAAGATACCATTCACGATGTTGCTGAGACTCAACTTCAGGCTATTACAAACTTGGAGTTGACTGAATCTACAAGTTGTGCCGAAAGCCCAGCTGTATCCTGCATGCAACGTATTGTTGACCATCAATCTAAATCCACAGCAATTGATATGAATACGGAGCCTGCTGCAGCTGTTTCTCCTGTGCCTGCTCGAAGTGTTTCTCCTGCACCTGCTGGGAGTGTTTCTCTTGAGCGTGCTAGAAGTGTTTCTCCCGAGCCTACTAGAAGTGTTTCTCTTGAGTGTGCTAGAAGTGTTTCTCCTGAGCCTGCTAGAAGTGTTTCTCTTGAGCCTGATGCCTCAAAACAACAACCCTCAAAAGAACAAACAGCTAAAATTACTGGTGCCGGGGTCAATGACTTGTTTTGGGAACAGTTCTTGACAGAGAATCCCGGTTCAACAGACTCTCAGGAAGTACAGTTAGAAAGAAACGATTCCAATGGTAGGGGGAACGGAATTAATCCAAGTGATCATGGCAAGTTGTGGTGGAATATGAGGAATGTAAATAACCTTACAGAACAGATGGGGCATCTCAGTCCAGTAGAGAAAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006979 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046983 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HSF_DNA-bind

Protein Analysis

454

Amino Acids

50.83

Weight (kDa)

5.67

Isoelectric Point (pI)

56.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSF_DNA-bind	PF00447	14 - 103	3.4e-30	HSF-type DNA-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002221)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18880 AT5G45710 AT5G45710 AT5G45710 AT5G45710
fragaria_vesca	FvH4_3g07170 FvH4_3g07170 FvH4_6g27900
malus_domestica	MD00G1007800.v1.1 MD09G1233700.v1.1 MD10G1274400.v1.1 MD17G1230100.v1.1
prunus_persica	Prupe.3G108700_v2.0.a1 Prupe.3G108700_v2.0.a1 Prupe.4G068100_v2.0.a1 Prupe.4G068100_v2.0.a1 Prupe.4G068100_v2.0.a1 Prupe.4G068100_v2.0.a1 Prupe.4G068100_v2.0.a1
pyrus_communis	pycom05g27300 pycom09g15200 pycom10g22900 pycom17g23300
rosa_chinensis	RchiOBHm_Chr2g0131371 RchiOBHm_Chr5g0011961
rosa_laevigata	RLG00000019181 RLG00000031873
rosa_multiflora	Rmu_sc0001475.1_g000001 Rmu_ssc0000009.1_g000034
rosa_roxburghii	Rroxscaffold_1G00064630 Rroxscaffold_2G00113040
rosa_rugosa	Rorug02G0296200 Rorug04G0460200
rosa_samantha	Rh2AG349500 Rh2BG356400 Rh2CG335300 Rh2DG374300 Rh5AG091800 Rh5BG087700 Rh5CG101500 Rh5DG088300
rosa_wichuraiana	Rw2G028360 Rw5G008020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	991
Acc36I	ACCTGC	1 cut(s)	991
AccB1I	GGYRCC	1 cut(s)	1154
AccII	CGCG	1 cut(s)	254
AccIII	TCCGGA	3 cut(s)	126, 136, 235
AciI	CCGC	3 cut(s)	452, 520, 611
AclWI	GGATC	2 cut(s)	34, 227
AcoI	YGGCCR	1 cut(s)	628
AcsI	RAATTY	1 cut(s)	248
AcuI	CTGAAG	2 cut(s)	408, 794
AcyI	GRCGYC	2 cut(s)	445, 557
AfaI	GTAC	3 cut(s)	609, 744, 1227
AfiI	CCNNNNNNNGG	2 cut(s)	454, 1254
AgsI	TTSAA	6 cut(s)	14, 514, 601, 620, 648, 1209
AjnI	CCWGG	1 cut(s)	342
AluBI	AGCT	8 cut(s)	117, 192, 205, 286, 392, 866, 944, 1142
AluI	AGCT	8 cut(s)	117, 192, 205, 286, 392, 866, 944, 1142
Alw26I	GTCTC	3 cut(s)	577, 725, 794
AlwI	GGATC	2 cut(s)	34, 227
Ama87I	CYCGRG	2 cut(s)	570, 1025
Aor13HI	TCCGGA	3 cut(s)	126, 136, 235
AoxI	GGCC	2 cut(s)	628, 660
ApeKI	GCWGC	5 cut(s)	202, 541, 544, 938, 941
ApoI	RAATTY	1 cut(s)	248
AseI	ATTAAT	1 cut(s)	1269
Asp700I	GAANNNNTTC	6 cut(s)	970, 1018, 1042, 1066, 1090, 1243
AspS9I	GGNCC	2 cut(s)	346, 517
AsuC2I	CCSGG	2 cut(s)	1159, 1203
AsuII	TTCGAA	1 cut(s)	47
AvaI	CYCGRG	2 cut(s)	570, 1025
AvaII	GGWCC	2 cut(s)	346, 517
BanI	GGYRCC	1 cut(s)	1154
BbsI	GAAGAC	1 cut(s)	56
BbvI	GCAGC	5 cut(s)	214, 553, 556, 925, 953
BccI	CCATC	3 cut(s)	688, 903, 1327
BceAI	ACGGC	1 cut(s)	554
BciT130I	CCWGG	1 cut(s)	344
BciVI	GTATCC	1 cut(s)	880
BclI	TGATCA	2 cut(s)	667, 1279
BcnI	CCSGG	2 cut(s)	1159, 1203
BcoDI	GTCTC	3 cut(s)	577, 725, 794
BfaI	CTAG	6 cut(s)	189, 717, 1011, 1035, 1059, 1083
BfmI	CTRYAG	1 cut(s)	939
BfuAI	ACCTGC	1 cut(s)	991
BfuI	GTATCC	1 cut(s)	880
BisI	GCNGC	5 cut(s)	203, 542, 545, 939, 942
BlsI	GCNGC	5 cut(s)	204, 543, 546, 940, 943
Bme1390I	CCNGG	3 cut(s)	344, 1159, 1203
Bme18I	GGWCC	2 cut(s)	346, 517
BmeT110I	CYCGRG	2 cut(s)	570, 1025
BmgT120I	GGNCC	2 cut(s)	346, 517
BmiI	GGNNCC	3 cut(s)	131, 933, 1156
BmrFI	CCNGG	3 cut(s)	344, 1159, 1203
BmsI	GCATC	3 cut(s)	687, 1096, 1348
BpiI	GAAGAC	1 cut(s)	56
BplI	GAGNNNNNCTC	2 cut(s)	982, 1014
BpmI	CTGGAG	1 cut(s)	326
Bpu10I	CCTNAGC	1 cut(s)	1074
Bpu14I	TTCGAA	1 cut(s)	47
BpuEI	CTTGAG	3 cut(s)	1022, 1070, 1118
BpuMI	CCSGG	2 cut(s)	1159, 1203
BsaHI	GRCGYC	2 cut(s)	445, 557
BsaI	GGTCTC	1 cut(s)	577
BsaJI	CCNNGG	4 cut(s)	349, 552, 625, 1158
BsaWI	WCCGGW	3 cut(s)	126, 136, 235
BsaXI	ACNNNNNCTCC	2 cut(s)	91, 121
Bsc4I	CCNNNNNNNGG	2 cut(s)	454, 1254
Bse118I	RCCGGY	1 cut(s)	313
Bse1I	ACTGG	2 cut(s)	1156, 1349
Bse3DI	GCAATG	2 cut(s)	248, 591
BseAI	TCCGGA	3 cut(s)	126, 136, 235
BseBI	CCWGG	1 cut(s)	344
BseDI	CCNNGG	4 cut(s)	349, 552, 625, 1158
BseGI	GGATG	4 cut(s)	10, 73, 297, 418
BseLI	CCNNNNNNNGG	2 cut(s)	454, 1254
BseMI	GCAATG	2 cut(s)	248, 591
BseMII	CTCAG	4 cut(s)	789, 1065, 1232, 1357
BseNI	ACTGG	2 cut(s)	1156, 1349
BseXI	GCAGC	5 cut(s)	214, 553, 556, 925, 953
BseYI	CCCAGC	2 cut(s)	862, 986
BsgI	GTGCAG	1 cut(s)	963
Bsh1236I	CGCG	1 cut(s)	254
BshFI	GGCC	2 cut(s)	630, 662
BshNI	GGYRCC	1 cut(s)	1154
BsiHKCI	CYCGRG	2 cut(s)	570, 1025
BsiSI	CCGG	7 cut(s)	127, 137, 236, 314, 631, 1158, 1203
BslI	CCNNNNNNNGG	2 cut(s)	454, 1254
BsmAI	GTCTC	3 cut(s)	577, 725, 794
BsmBI	CGTCTC	1 cut(s)	725
BsnI	GGCC	2 cut(s)	630, 662
Bso31I	GGTCTC	1 cut(s)	577
BsoBI	CYCGRG	2 cut(s)	570, 1025
Bsp119I	TTCGAA	1 cut(s)	47
Bsp13I	TCCGGA	3 cut(s)	126, 136, 235
Bsp143I	GATC	4 cut(s)	26, 232, 667, 1279
Bsp19I	CCATGG	1 cut(s)	552
Bsp68I	TCGCGA	1 cut(s)	254
BspACI	CCGC	3 cut(s)	452, 520, 611
BspANI	GGCC	2 cut(s)	630, 662
BspCNI	CTCAG	4 cut(s)	790, 1066, 1231, 1356
BspEI	TCCGGA	3 cut(s)	126, 136, 235
BspFNI	CGCG	1 cut(s)	254
BspLI	GGNNCC	3 cut(s)	131, 933, 1156
BspMAI	CTGCAG	1 cut(s)	943
BspMI	ACCTGC	1 cut(s)	991
BspPI	GGATC	2 cut(s)	34, 227
BspT104I	TTCGAA	1 cut(s)	47
BspT107I	GGYRCC	1 cut(s)	1154
BspTNI	GGTCTC	1 cut(s)	577
BsrDI	GCAATG	2 cut(s)	248, 591
BsrFI	RCCGGY	1 cut(s)	313
BsrI	ACTGG	2 cut(s)	1156, 1349
BssAI	RCCGGY	1 cut(s)	313
BssECI	CCNNGG	4 cut(s)	349, 552, 625, 1158
BssMI	GATC	4 cut(s)	26, 232, 667, 1279
BssNI	GRCGYC	2 cut(s)	445, 557
BssT1I	CCWWGG	2 cut(s)	349, 552
Bst2UI	CCWGG	1 cut(s)	344
Bst4CI	ACNGT	2 cut(s)	1185, 1230
Bst6I	CTCTTC	2 cut(s)	395, 629
BstACI	GRCGYC	2 cut(s)	445, 557
BstAPI	GCANNNNNTGC	1 cut(s)	532
BstBI	TTCGAA	1 cut(s)	47
BstC8I	GCNNGC	6 cut(s)	524, 878, 936, 960, 1008, 1080
BstDEI	CTNAG	4 cut(s)	798, 1074, 1218, 1343
BstDSI	CCRYGG	2 cut(s)	552, 625
BstF5I	GGATG	4 cut(s)	10, 73, 297, 418
BstFNI	CGCG	1 cut(s)	254
BstKTI	GATC	4 cut(s)	29, 235, 670, 1282
BstMAI	GTCTC	3 cut(s)	577, 725, 794
BstMBI	GATC	4 cut(s)	26, 232, 667, 1279
BstMWI	GCNNNNNNNGC	3 cut(s)	481, 532, 541
BstNI	CCWGG	1 cut(s)	344
BstNSI	RCATGY	1 cut(s)	880
BstSCI	CCNGG	3 cut(s)	342, 1157, 1201
BstSFI	CTRYAG	1 cut(s)	939
BstUI	CGCG	1 cut(s)	254
BstV1I	GCAGC	5 cut(s)	214, 553, 556, 925, 953
BstV2I	GAAGAC	1 cut(s)	56
BstX2I	RGATCY	1 cut(s)	26
BstYI	RGATCY	1 cut(s)	26
BsuI	GTATCC	1 cut(s)	880
BsuRI	GGCC	2 cut(s)	630, 662
BtgI	CCRYGG	2 cut(s)	552, 625
BtsCI	GGATG	4 cut(s)	10, 73, 297, 418
BtuMI	TCGCGA	1 cut(s)	254
BveI	ACCTGC	1 cut(s)	991
Cac8I	GCNNGC	6 cut(s)	524, 878, 936, 960, 1008, 1080
Cfr10I	RCCGGY	1 cut(s)	313
Cfr13I	GGNCC	2 cut(s)	346, 517
CseI	GACGC	2 cut(s)	453, 546
Csp6I	GTAC	3 cut(s)	608, 743, 1226
CspCI	CAANNNNNGTGG	2 cut(s)	898, 933
CviAII	CATG	6 cut(s)	434, 470, 553, 877, 1283, 1362
CviQI	GTAC	3 cut(s)	608, 743, 1226
DdeI	CTNAG	4 cut(s)	798, 1074, 1218, 1343
DpnI	GATC	4 cut(s)	28, 234, 669, 1281
DpnII	GATC	4 cut(s)	26, 232, 667, 1279
EaeI	YGGCCR	1 cut(s)	628
Eam1104I	CTCTTC	2 cut(s)	395, 629
EarI	CTCTTC	2 cut(s)	395, 629
Eco130I	CCWWGG	2 cut(s)	349, 552
Eco31I	GGTCTC	1 cut(s)	577
Eco47I	GGWCC	2 cut(s)	346, 517
Eco57I	CTGAAG	2 cut(s)	408, 794
Eco88I	CYCGRG	2 cut(s)	570, 1025
EcoRI	GAATTC	1 cut(s)	248
EcoRII	CCWGG	1 cut(s)	342
EcoT14I	CCWWGG	2 cut(s)	349, 552
ErhI	CCWWGG	2 cut(s)	349, 552
Esp3I	CGTCTC	1 cut(s)	725
FaeI	CATG	6 cut(s)	437, 473, 556, 880, 1286, 1365
FalI	AAGNNNNNCTT	4 cut(s)	432, 464, 506, 538
FatI	CATG	6 cut(s)	433, 469, 552, 876, 1282, 1361
FauNDI	CATATG	3 cut(s)	55, 214, 531
FbaI	TGATCA	2 cut(s)	667, 1279
Fnu4HI	GCNGC	5 cut(s)	203, 542, 545, 939, 942
FokI	GGATG	4 cut(s)	17, 80, 284, 425
Fsp4HI	GCNGC	5 cut(s)	203, 542, 545, 939, 942
FspBI	CTAG	6 cut(s)	189, 717, 1011, 1035, 1059, 1083
GluI	GCNGC	5 cut(s)	203, 542, 545, 939, 942
GsaI	CCCAGC	2 cut(s)	866, 990
GsuI	CTGGAG	1 cut(s)	326
HaeIII	GGCC	2 cut(s)	630, 662
HapII	CCGG	7 cut(s)	127, 137, 236, 314, 631, 1158, 1203
HgaI	GACGC	2 cut(s)	453, 546
Hin1I	GRCGYC	2 cut(s)	445, 557
Hin1II	CATG	6 cut(s)	437, 473, 556, 880, 1286, 1365
HincII	GTYRAC	2 cut(s)	834, 892
HindII	GTYRAC	2 cut(s)	834, 892
HindIII	AAGCTT	1 cut(s)	115
HinfI	GANTC	9 cut(s)	83, 601, 700, 755, 802, 839, 1198, 1214, 1244
HpaII	CCGG	7 cut(s)	127, 137, 236, 314, 631, 1158, 1203
Hpy166II	GTNNAC	2 cut(s)	834, 892
Hpy188I	TCNGA	4 cut(s)	224, 388, 683, 693
Hpy8I	GTNNAC	2 cut(s)	834, 892
HpyAV	CCTTC	2 cut(s)	403, 508
HpyCH4III	ACNGT	2 cut(s)	1185, 1230
HpyCH4IV	ACGT	2 cut(s)	641, 883
HpyF10VI	GCNNNNNNNGC	3 cut(s)	481, 532, 541
HpyF3I	CTNAG	4 cut(s)	798, 1074, 1218, 1343
HpySE526I	ACGT	2 cut(s)	641, 883
Hsp92I	GRCGYC	2 cut(s)	445, 557
Hsp92II	CATG	6 cut(s)	437, 473, 556, 880, 1286, 1365
Kpn2I	TCCGGA	3 cut(s)	126, 136, 235
Ksp22I	TGATCA	2 cut(s)	667, 1279
Kzo9I	GATC	4 cut(s)	26, 232, 667, 1279
LmnI	GCTCC	2 cut(s)	238, 931
Lsp1109I	GCAGC	5 cut(s)	214, 553, 556, 925, 953
LweI	GCATC	3 cut(s)	687, 1096, 1348
MaeI	CTAG	6 cut(s)	189, 717, 1011, 1035, 1059, 1083
MaeII	ACGT	2 cut(s)	641, 883
MaeIII	GTNAC	1 cut(s)	712
MalI	GATC	4 cut(s)	28, 234, 669, 1281
MboI	GATC	4 cut(s)	26, 232, 667, 1279
MboII	GAAGA	6 cut(s)	61, 304, 318, 412, 646, 788
MfeI	CAATTG	2 cut(s)	749, 915
MflI	RGATCY	1 cut(s)	26
MluCI	AATT	5 cut(s)	248, 749, 915, 1146, 1266
MlyI	GAGTC	4 cut(s)	709, 764, 796, 1208
MroI	TCCGGA	3 cut(s)	126, 136, 235
MroXI	GAANNNNTTC	6 cut(s)	970, 1018, 1042, 1066, 1090, 1243
MseI	TTAA	3 cut(s)	171, 429, 1269
MspA1I	CMGCKG	2 cut(s)	866, 944
MspI	CCGG	7 cut(s)	127, 137, 236, 314, 631, 1158, 1203
MspR9I	CCNGG	3 cut(s)	344, 1159, 1203
MunI	CAATTG	2 cut(s)	749, 915
MvaI	CCWGG	1 cut(s)	344
MvnI	CGCG	1 cut(s)	254
MwoI	GCNNNNNNNGC	3 cut(s)	481, 532, 541
NciI	CCSGG	2 cut(s)	1159, 1203
NcoI	CCATGG	1 cut(s)	552
NdeI	CATATG	3 cut(s)	55, 214, 531
NdeII	GATC	4 cut(s)	26, 232, 667, 1279
NlaIII	CATG	6 cut(s)	437, 473, 556, 880, 1286, 1365
NlaIV	GGNNCC	3 cut(s)	131, 933, 1156
NruI	TCGCGA	1 cut(s)	254
NspI	RCATGY	1 cut(s)	880
NspV	TTCGAA	1 cut(s)	47
PaeI	GCATGC	1 cut(s)	880
PaeR7I	CTCGAG	1 cut(s)	570
PaqCI	CACCTGC	1 cut(s)	991
PcsI	WCGNNNNNNNCGW	1 cut(s)	83
PdmI	GAANNNNTTC	6 cut(s)	970, 1018, 1042, 1066, 1090, 1243
PfeI	GAWTC	5 cut(s)	83, 601, 839, 1198, 1244
PkrI	GCNGC	5 cut(s)	204, 543, 546, 940, 943
PleI	GAGTC	4 cut(s)	708, 763, 796, 1208
PpsI	GAGTC	4 cut(s)	708, 763, 796, 1208
PshBI	ATTAAT	1 cut(s)	1269
Psp6I	CCWGG	1 cut(s)	342
PspFI	CCCAGC	2 cut(s)	862, 986
PspGI	CCWGG	1 cut(s)	342
PspN4I	GGNNCC	3 cut(s)	131, 933, 1156
PspPI	GGNCC	2 cut(s)	346, 517
PspXI	VCTCGAGB	1 cut(s)	570
PstI	CTGCAG	1 cut(s)	943
PsuI	RGATCY	1 cut(s)	26
PvuII	CAGCTG	2 cut(s)	866, 944
RruI	TCGCGA	1 cut(s)	254
RsaI	GTAC	3 cut(s)	609, 744, 1227
RsaNI	GTAC	3 cut(s)	608, 743, 1226
SaqAI	TTAA	3 cut(s)	171, 429, 1269
SatI	GCNGC	5 cut(s)	203, 542, 545, 939, 942
Sau3AI	GATC	4 cut(s)	26, 232, 667, 1279
Sau96I	GGNCC	2 cut(s)	346, 517
SchI	GAGTC	4 cut(s)	709, 764, 796, 1208
ScrFI	CCNGG	3 cut(s)	344, 1159, 1203
SfaNI	GCATC	3 cut(s)	687, 1096, 1348
SfcI	CTRYAG	1 cut(s)	939
Sfr274I	CTCGAG	1 cut(s)	570
SfuI	TTCGAA	1 cut(s)	47
SinI	GGWCC	2 cut(s)	346, 517
SlaI	CTCGAG	1 cut(s)	570
SmlI	CTYRAG	4 cut(s)	570, 1001, 1049, 1097
SmoI	CTYRAG	4 cut(s)	570, 1001, 1049, 1097
SphI	GCATGC	1 cut(s)	880
Sse9I	AATT	5 cut(s)	248, 749, 915, 1146, 1266
SsiI	CCGC	3 cut(s)	452, 520, 611
SspMI	CTAG	6 cut(s)	189, 717, 1011, 1035, 1059, 1083
StyD4I	CCNGG	3 cut(s)	342, 1157, 1201
StyI	CCWWGG	2 cut(s)	349, 552
TaaI	ACNGT	2 cut(s)	1185, 1230
TaiI	ACGT	2 cut(s)	644, 886
TaqI	TCGA	6 cut(s)	47, 77, 86, 571, 654, 964
TasI	AATT	5 cut(s)	248, 749, 915, 1146, 1266
TatI	WGTACW	1 cut(s)	1225
TfiI	GAWTC	5 cut(s)	83, 601, 839, 1198, 1244
Tru1I	TTAA	3 cut(s)	171, 429, 1269
Tru9I	TTAA	3 cut(s)	171, 429, 1269
TseI	GCWGC	5 cut(s)	202, 541, 544, 938, 941
TspDTI	ATGAA	8 cut(s)	21, 72, 109, 305, 366, 422, 450, 938
TspGWI	ACGGA	3 cut(s)	614, 944, 1278
VpaK11BI	GGWCC	2 cut(s)	346, 517
VspI	ATTAAT	1 cut(s)	1269
XapI	RAATTY	1 cut(s)	248
XceI	RCATGY	1 cut(s)	880
XhoI	CTCGAG	1 cut(s)	570
XmnI	GAANNNNTTC	6 cut(s)	970, 1018, 1042, 1066, 1090, 1243
XspI	CTAG	6 cut(s)	189, 717, 1011, 1035, 1059, 1083

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.