Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0002221

Physical Location & Seq

Genomic Coordinates Reverse (-)

7772997 .. 7774495

Gene Structure 1499 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG088300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1371 bp

ATGGATGAAGTTCAAGGCGTTTCTGGATCTTTACCTCCTTTTCTTTCCAAGACATATGAAATGGTGGATGATTGTTCGACTGATTCAATCGTGTCTTGGAGTGCGAGTAATAGAAGCTTCATTGTCTGGAACCCTCCGGAGTTCGCCAGAGACTTGTTGCCAAAGTATTTTAAGCACAACAACTTCTCTAGCTTCATTAGGCAGCTCAACACATATGGTTTTCGAAAGATTGATCCGGAGCAATGGGAATTCGCGAATGATGATTTTGTTAGAGGTGAGCCACAGCTTATGAAGAACATCCACAGACGAAAGCCGGTGCATAGTCATTCTGTGCCGAACCTCCAGGTCCAAGGACAAGGACAAGGACAAGGACAAGGGAGTTCGTCGTTGTCTGAAGCTGAAAGGAAGAGTATGAAGGATGAGATTGAGAGGCTGAACCATGAAAAAGAACGCCTTGCGGTGGAGTTACAGAGGCATGAGCAGGAGAGGCAGGGAATGGAGTTGCAAATGCAGGTCTTGAAGGACCGCTTGCAACACATGCAACGGCAGCAGCAAACCATGGCGTCTGTTGTGGCTCGAGTTTTGCAGAGACCAGACATTGCCTTGAATCCTTTACCGCAGTTTGAACTCTGTGGCCGGAAGAGGAGGTTTTCAAGTGTCGATTTGGCCTATGATCAGGTCAGCATTGGAAGTGGTCAGATGGGGAGTTGGGAAAATGTAACTGGAGGAAATATGGAGATGGGAAAGGTACTGCAATTGGAGTCATTCCTGACATTTTGGGAAGATACCATTCACGATGTTGCTGAGACTCAACTTCAGGCTAATACAAACATGGAGTTAACTGAATCTACAAGTTGTGCCGAAAGCCCAGCTGTATCCTGCATGCAACGTATTGTTGACCATCAATCTAAATCCACAGCAATTGATATGAATACGGAGCCTGCTGCAGCTGTTTCTCCTGTGCCTGCTCGAAGTGTTTCTCCTGCACCTGCTGGGAGTGTTTCTCTTGAGCGTGCTAGAAGTGTTTCTCCCGAGCCTACTAGAAGTGTTTCTCTTGAGTGTGCTAGAAGTGTTTCTCCTGAGCCTGCTAGAAGTGTTTCTCTTGAGCCTGATGCCTCAAAACAACAACCCTCAAAAGAACAAACAGCTAAAATTACTGGTGCCGGGGTCAATGACTTGTTTTGGGAACAGTTCTTGACAGAGAATCCCGGTTCAACAGACTCTCAGGAAGTACAGTTAGAAAGAAACGATTCCGATGGTAGGGGGAACGAAATTAATCCAAGTGATCATGGCAAGTTGTGGTGGAATATGAGGAATGTAAATAACCTTACAGAACAGATGGGGCATCTCAGTCCAGTAGAGAAAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006979 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046983 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HSF_DNA-bind

Protein Analysis

456

Amino Acids

51.2

Weight (kDa)

5.31

Isoelectric Point (pI)

58.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSF_DNA-bind	PF00447	14 - 103	3.4e-30	HSF-type DNA-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002221)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18880 AT5G45710 AT5G45710 AT5G45710 AT5G45710
fragaria_vesca	FvH4_3g07170 FvH4_3g07170 FvH4_6g27900
malus_domestica	MD00G1007800.v1.1 MD09G1233700.v1.1 MD10G1274400.v1.1 MD17G1230100.v1.1
prunus_persica	Prupe.3G108700_v2.0.a1 Prupe.3G108700_v2.0.a1 Prupe.4G068100_v2.0.a1 Prupe.4G068100_v2.0.a1 Prupe.4G068100_v2.0.a1 Prupe.4G068100_v2.0.a1 Prupe.4G068100_v2.0.a1
pyrus_communis	pycom05g27300 pycom09g15200 pycom10g22900 pycom17g23300
rosa_chinensis	RchiOBHm_Chr2g0131371 RchiOBHm_Chr5g0011961
rosa_laevigata	RLG00000019181 RLG00000031873
rosa_multiflora	Rmu_sc0001475.1_g000001 Rmu_ssc0000009.1_g000034
rosa_roxburghii	Rroxscaffold_1G00064630 Rroxscaffold_2G00113040
rosa_rugosa	Rorug02G0296200 Rorug04G0460200
rosa_samantha	Rh2AG349500 Rh2BG356400 Rh2CG335300 Rh2DG374300 Rh5AG091800 Rh5BG087700 Rh5CG101500 Rh5DG088300
rosa_wichuraiana	Rw2G028360 Rw5G008020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	997
Acc36I	ACCTGC	2 cut(s)	502, 997
AccB1I	GGYRCC	1 cut(s)	1160
AccII	CGCG	1 cut(s)	254
AccIII	TCCGGA	2 cut(s)	136, 235
AciI	CCGC	3 cut(s)	458, 526, 617
AclWI	GGATC	2 cut(s)	34, 227
AcoI	YGGCCR	1 cut(s)	634
AcsI	RAATTY	1 cut(s)	248
AcuI	CTGAAG	2 cut(s)	414, 800
AcyI	GRCGYC	1 cut(s)	563
AfaI	GTAC	2 cut(s)	750, 1233
AfiI	CCNNNNNNNGG	2 cut(s)	460, 1260
AgsI	TTSAA	7 cut(s)	14, 87, 520, 607, 626, 654, 1215
AjnI	CCWGG	1 cut(s)	342
AluBI	AGCT	8 cut(s)	117, 192, 205, 286, 398, 872, 950, 1148
AluI	AGCT	8 cut(s)	117, 192, 205, 286, 398, 872, 950, 1148
Alw26I	GTCTC	3 cut(s)	144, 583, 800
AlwI	GGATC	2 cut(s)	34, 227
Ama87I	CYCGRG	2 cut(s)	576, 1031
Aor13HI	TCCGGA	2 cut(s)	136, 235
AoxI	GGCC	2 cut(s)	634, 666
ApeKI	GCWGC	5 cut(s)	202, 547, 550, 944, 947
ApoI	RAATTY	1 cut(s)	248
AseI	ATTAAT	1 cut(s)	1275
Asp700I	GAANNNNTTC	6 cut(s)	976, 1024, 1048, 1072, 1096, 1249
AspS9I	GGNCC	2 cut(s)	346, 523
AsuC2I	CCSGG	2 cut(s)	1165, 1209
AsuHPI	GGTGA	1 cut(s)	287
AsuII	TTCGAA	1 cut(s)	223
AvaI	CYCGRG	2 cut(s)	576, 1031
AvaII	GGWCC	2 cut(s)	346, 523
BanI	GGYRCC	1 cut(s)	1160
BbvI	GCAGC	5 cut(s)	214, 559, 562, 931, 959
BccI	CCATC	5 cut(s)	694, 733, 909, 1250, 1333
BceAI	ACGGC	1 cut(s)	560
BciT130I	CCWGG	1 cut(s)	344
BciVI	GTATCC	1 cut(s)	886
BclI	TGATCA	2 cut(s)	673, 1285
BcnI	CCSGG	2 cut(s)	1165, 1209
BcoDI	GTCTC	3 cut(s)	144, 583, 800
BfaI	CTAG	5 cut(s)	189, 1017, 1041, 1065, 1089
BfmI	CTRYAG	1 cut(s)	945
BfuAI	ACCTGC	2 cut(s)	502, 997
BfuI	GTATCC	1 cut(s)	886
BisI	GCNGC	5 cut(s)	203, 548, 551, 945, 948
BlsI	GCNGC	5 cut(s)	204, 549, 552, 946, 949
Bme1390I	CCNGG	3 cut(s)	344, 1165, 1209
Bme18I	GGWCC	2 cut(s)	346, 523
BmeT110I	CYCGRG	2 cut(s)	576, 1031
BmgT120I	GGNCC	2 cut(s)	346, 523
BmiI	GGNNCC	3 cut(s)	131, 939, 1162
BmrFI	CCNGG	3 cut(s)	344, 1165, 1209
BmsI	GCATC	2 cut(s)	1102, 1354
BplI	GAGNNNNNCTC	2 cut(s)	988, 1020
BpmI	CTGGAG	2 cut(s)	326, 744
Bpu10I	CCTNAGC	1 cut(s)	1080
Bpu14I	TTCGAA	1 cut(s)	223
BpuEI	CTTGAG	3 cut(s)	1028, 1076, 1124
BpuMI	CCSGG	2 cut(s)	1165, 1209
BsaHI	GRCGYC	1 cut(s)	563
BsaI	GGTCTC	1 cut(s)	583
BsaJI	CCNNGG	3 cut(s)	349, 558, 1164
BsaWI	WCCGGW	2 cut(s)	136, 235
BsaXI	ACNNNNNCTCC	2 cut(s)	91, 121
Bsc4I	CCNNNNNNNGG	2 cut(s)	460, 1260
Bse118I	RCCGGY	1 cut(s)	313
Bse1I	ACTGG	3 cut(s)	727, 1162, 1355
Bse3DI	GCAATG	2 cut(s)	248, 597
BseAI	TCCGGA	2 cut(s)	136, 235
BseBI	CCWGG	1 cut(s)	344
BseDI	CCNNGG	3 cut(s)	349, 558, 1164
BseGI	GGATG	4 cut(s)	10, 73, 297, 424
BseLI	CCNNNNNNNGG	2 cut(s)	460, 1260
BseMI	GCAATG	2 cut(s)	248, 597
BseMII	CTCAG	4 cut(s)	795, 1071, 1238, 1363
BseNI	ACTGG	3 cut(s)	727, 1162, 1355
BseRI	GAGGAG	1 cut(s)	658
BseXI	GCAGC	5 cut(s)	214, 559, 562, 931, 959
BseYI	CCCAGC	2 cut(s)	868, 992
BsgI	GTGCAG	1 cut(s)	969
Bsh1236I	CGCG	1 cut(s)	254
BshFI	GGCC	2 cut(s)	636, 668
BshNI	GGYRCC	1 cut(s)	1160
BsiHKCI	CYCGRG	2 cut(s)	576, 1031
BsiSI	CCGG	6 cut(s)	137, 236, 314, 637, 1164, 1209
BslI	CCNNNNNNNGG	2 cut(s)	460, 1260
BsmAI	GTCTC	3 cut(s)	144, 583, 800
BsnI	GGCC	2 cut(s)	636, 668
Bso31I	GGTCTC	1 cut(s)	583
BsoBI	CYCGRG	2 cut(s)	576, 1031
Bsp119I	TTCGAA	1 cut(s)	223
Bsp13I	TCCGGA	2 cut(s)	136, 235
Bsp143I	GATC	4 cut(s)	26, 232, 673, 1285
Bsp19I	CCATGG	1 cut(s)	558
Bsp68I	TCGCGA	1 cut(s)	254
BspACI	CCGC	3 cut(s)	458, 526, 617
BspANI	GGCC	2 cut(s)	636, 668
BspCNI	CTCAG	4 cut(s)	796, 1072, 1237, 1362
BspEI	TCCGGA	2 cut(s)	136, 235
BspFNI	CGCG	1 cut(s)	254
BspLI	GGNNCC	3 cut(s)	131, 939, 1162
BspMAI	CTGCAG	1 cut(s)	949
BspMI	ACCTGC	2 cut(s)	502, 997
BspPI	GGATC	2 cut(s)	34, 227
BspT104I	TTCGAA	1 cut(s)	223
BspT107I	GGYRCC	1 cut(s)	1160
BspTNI	GGTCTC	1 cut(s)	583
BsrDI	GCAATG	2 cut(s)	248, 597
BsrFI	RCCGGY	1 cut(s)	313
BsrI	ACTGG	3 cut(s)	727, 1162, 1355
BssAI	RCCGGY	1 cut(s)	313
BssECI	CCNNGG	3 cut(s)	349, 558, 1164
BssMI	GATC	4 cut(s)	26, 232, 673, 1285
BssNI	GRCGYC	1 cut(s)	563
BssT1I	CCWWGG	2 cut(s)	349, 558
Bst2UI	CCWGG	1 cut(s)	344
Bst4CI	ACNGT	2 cut(s)	1191, 1236
Bst6I	CTCTTC	2 cut(s)	401, 635
BstACI	GRCGYC	1 cut(s)	563
BstAPI	GCANNNNNTGC	1 cut(s)	538
BstBI	TTCGAA	1 cut(s)	223
BstC8I	GCNNGC	6 cut(s)	530, 884, 942, 966, 1014, 1086
BstDEI	CTNAG	4 cut(s)	804, 1080, 1224, 1349
BstDSI	CCRYGG	1 cut(s)	558
BstF5I	GGATG	4 cut(s)	10, 73, 297, 424
BstFNI	CGCG	1 cut(s)	254
BstKTI	GATC	4 cut(s)	29, 235, 676, 1288
BstMAI	GTCTC	3 cut(s)	144, 583, 800
BstMBI	GATC	4 cut(s)	26, 232, 673, 1285
BstMWI	GCNNNNNNNGC	3 cut(s)	487, 538, 547
BstNI	CCWGG	1 cut(s)	344
BstNSI	RCATGY	2 cut(s)	541, 886
BstSCI	CCNGG	3 cut(s)	342, 1163, 1207
BstSFI	CTRYAG	1 cut(s)	945
BstUI	CGCG	1 cut(s)	254
BstV1I	GCAGC	5 cut(s)	214, 559, 562, 931, 959
BstX2I	RGATCY	1 cut(s)	26
BstYI	RGATCY	1 cut(s)	26
BsuI	GTATCC	1 cut(s)	886
BsuRI	GGCC	2 cut(s)	636, 668
BtgI	CCRYGG	1 cut(s)	558
BtsCI	GGATG	4 cut(s)	10, 73, 297, 424
BtuMI	TCGCGA	1 cut(s)	254
BveI	ACCTGC	2 cut(s)	502, 997
Cac8I	GCNNGC	6 cut(s)	530, 884, 942, 966, 1014, 1086
Cfr10I	RCCGGY	1 cut(s)	313
Cfr13I	GGNCC	2 cut(s)	346, 523
CseI	GACGC	1 cut(s)	552
Csp6I	GTAC	2 cut(s)	749, 1232
CspCI	CAANNNNNGTGG	2 cut(s)	904, 939
CviAII	CATG	8 cut(s)	440, 476, 538, 559, 832, 883, 1289, 1368
CviQI	GTAC	2 cut(s)	749, 1232
DdeI	CTNAG	4 cut(s)	804, 1080, 1224, 1349
DpnI	GATC	4 cut(s)	28, 234, 675, 1287
DpnII	GATC	4 cut(s)	26, 232, 673, 1285
EaeI	YGGCCR	1 cut(s)	634
Eam1104I	CTCTTC	2 cut(s)	401, 635
EarI	CTCTTC	2 cut(s)	401, 635
Eco130I	CCWWGG	2 cut(s)	349, 558
Eco31I	GGTCTC	1 cut(s)	583
Eco47I	GGWCC	2 cut(s)	346, 523
Eco57I	CTGAAG	2 cut(s)	414, 800
Eco88I	CYCGRG	2 cut(s)	576, 1031
EcoRI	GAATTC	1 cut(s)	248
EcoRII	CCWGG	1 cut(s)	342
EcoT14I	CCWWGG	2 cut(s)	349, 558
ErhI	CCWWGG	2 cut(s)	349, 558
FaeI	CATG	8 cut(s)	443, 479, 541, 562, 835, 886, 1292, 1371
FalI	AAGNNNNNCTT	4 cut(s)	438, 470, 512, 544
FatI	CATG	8 cut(s)	439, 475, 537, 558, 831, 882, 1288, 1367
FauNDI	CATATG	2 cut(s)	55, 214
FbaI	TGATCA	2 cut(s)	673, 1285
Fnu4HI	GCNGC	5 cut(s)	203, 548, 551, 945, 948
FokI	GGATG	4 cut(s)	17, 80, 284, 431
Fsp4HI	GCNGC	5 cut(s)	203, 548, 551, 945, 948
FspBI	CTAG	5 cut(s)	189, 1017, 1041, 1065, 1089
GluI	GCNGC	5 cut(s)	203, 548, 551, 945, 948
GsaI	CCCAGC	2 cut(s)	872, 996
GsuI	CTGGAG	2 cut(s)	326, 744
HaeIII	GGCC	2 cut(s)	636, 668
HapII	CCGG	6 cut(s)	137, 236, 314, 637, 1164, 1209
HgaI	GACGC	1 cut(s)	552
Hin1I	GRCGYC	1 cut(s)	563
Hin1II	CATG	8 cut(s)	443, 479, 541, 562, 835, 886, 1292, 1371
HincII	GTYRAC	2 cut(s)	840, 898
HindII	GTYRAC	2 cut(s)	840, 898
HindIII	AAGCTT	1 cut(s)	115
HinfI	GANTC	8 cut(s)	83, 607, 761, 808, 845, 1204, 1220, 1250
HpaI	GTTAAC	1 cut(s)	840
HpaII	CCGG	6 cut(s)	137, 236, 314, 637, 1164, 1209
HphI	GGTGA	1 cut(s)	287
Hpy166II	GTNNAC	2 cut(s)	840, 898
Hpy188I	TCNGA	3 cut(s)	394, 699, 1255
Hpy8I	GTNNAC	2 cut(s)	840, 898
Hpy99I	CGWCG	1 cut(s)	388
HpyAV	CCTTC	2 cut(s)	409, 514
HpyCH4III	ACNGT	2 cut(s)	1191, 1236
HpyCH4IV	ACGT	1 cut(s)	889
HpyF10VI	GCNNNNNNNGC	3 cut(s)	487, 538, 547
HpyF3I	CTNAG	4 cut(s)	804, 1080, 1224, 1349
HpySE526I	ACGT	1 cut(s)	889
Hsp92I	GRCGYC	1 cut(s)	563
Hsp92II	CATG	8 cut(s)	443, 479, 541, 562, 835, 886, 1292, 1371
Kpn2I	TCCGGA	2 cut(s)	136, 235
Ksp22I	TGATCA	2 cut(s)	673, 1285
KspAI	GTTAAC	1 cut(s)	840
Kzo9I	GATC	4 cut(s)	26, 232, 673, 1285
LmnI	GCTCC	2 cut(s)	238, 937
Lsp1109I	GCAGC	5 cut(s)	214, 559, 562, 931, 959
LweI	GCATC	2 cut(s)	1102, 1354
MaeI	CTAG	5 cut(s)	189, 1017, 1041, 1065, 1089
MaeII	ACGT	1 cut(s)	889
MaeIII	GTNAC	2 cut(s)	465, 718
MalI	GATC	4 cut(s)	28, 234, 675, 1287
MboI	GATC	4 cut(s)	26, 232, 673, 1285
MboII	GAAGA	4 cut(s)	304, 418, 652, 794
MfeI	CAATTG	2 cut(s)	755, 921
MflI	RGATCY	1 cut(s)	26
MluCI	AATT	5 cut(s)	248, 755, 921, 1152, 1272
MlyI	GAGTC	3 cut(s)	770, 802, 1214
MroI	TCCGGA	2 cut(s)	136, 235
MroXI	GAANNNNTTC	6 cut(s)	976, 1024, 1048, 1072, 1096, 1249
MseI	TTAA	3 cut(s)	171, 839, 1275
MspA1I	CMGCKG	2 cut(s)	872, 950
MspI	CCGG	6 cut(s)	137, 236, 314, 637, 1164, 1209
MspR9I	CCNGG	3 cut(s)	344, 1165, 1209
MunI	CAATTG	2 cut(s)	755, 921
MvaI	CCWGG	1 cut(s)	344
MvnI	CGCG	1 cut(s)	254
MwoI	GCNNNNNNNGC	3 cut(s)	487, 538, 547
NciI	CCSGG	2 cut(s)	1165, 1209
NcoI	CCATGG	1 cut(s)	558
NdeI	CATATG	2 cut(s)	55, 214
NdeII	GATC	4 cut(s)	26, 232, 673, 1285
NlaIII	CATG	8 cut(s)	443, 479, 541, 562, 835, 886, 1292, 1371
NlaIV	GGNNCC	3 cut(s)	131, 939, 1162
NruI	TCGCGA	1 cut(s)	254
NspI	RCATGY	2 cut(s)	541, 886
NspV	TTCGAA	1 cut(s)	223
PaeI	GCATGC	1 cut(s)	886
PaeR7I	CTCGAG	1 cut(s)	576
PaqCI	CACCTGC	1 cut(s)	997
PdmI	GAANNNNTTC	6 cut(s)	976, 1024, 1048, 1072, 1096, 1249
PfeI	GAWTC	5 cut(s)	83, 607, 845, 1204, 1250
PkrI	GCNGC	5 cut(s)	204, 549, 552, 946, 949
PleI	GAGTC	3 cut(s)	769, 802, 1214
PpsI	GAGTC	3 cut(s)	769, 802, 1214
PshBI	ATTAAT	1 cut(s)	1275
Psp6I	CCWGG	1 cut(s)	342
PspFI	CCCAGC	2 cut(s)	868, 992
PspGI	CCWGG	1 cut(s)	342
PspN4I	GGNNCC	3 cut(s)	131, 939, 1162
PspPI	GGNCC	2 cut(s)	346, 523
PspXI	VCTCGAGB	1 cut(s)	576
PstI	CTGCAG	1 cut(s)	949
PsuI	RGATCY	1 cut(s)	26
PvuII	CAGCTG	2 cut(s)	872, 950
RruI	TCGCGA	1 cut(s)	254
RsaI	GTAC	2 cut(s)	750, 1233
RsaNI	GTAC	2 cut(s)	749, 1232
SaqAI	TTAA	3 cut(s)	171, 839, 1275
SatI	GCNGC	5 cut(s)	203, 548, 551, 945, 948
Sau3AI	GATC	4 cut(s)	26, 232, 673, 1285
Sau96I	GGNCC	2 cut(s)	346, 523
SchI	GAGTC	3 cut(s)	770, 802, 1214
ScrFI	CCNGG	3 cut(s)	344, 1165, 1209
SfaNI	GCATC	2 cut(s)	1102, 1354
SfcI	CTRYAG	1 cut(s)	945
Sfr274I	CTCGAG	1 cut(s)	576
SfuI	TTCGAA	1 cut(s)	223
SinI	GGWCC	2 cut(s)	346, 523
SlaI	CTCGAG	1 cut(s)	576
SmlI	CTYRAG	4 cut(s)	576, 1007, 1055, 1103
SmoI	CTYRAG	4 cut(s)	576, 1007, 1055, 1103
SphI	GCATGC	1 cut(s)	886
Sse9I	AATT	5 cut(s)	248, 755, 921, 1152, 1272
SsiI	CCGC	3 cut(s)	458, 526, 617
SspMI	CTAG	5 cut(s)	189, 1017, 1041, 1065, 1089
StyD4I	CCNGG	3 cut(s)	342, 1163, 1207
StyI	CCWWGG	2 cut(s)	349, 558
TaaI	ACNGT	2 cut(s)	1191, 1236
TaiI	ACGT	1 cut(s)	892
TaqI	TCGA	5 cut(s)	77, 223, 577, 660, 970
TasI	AATT	5 cut(s)	248, 755, 921, 1152, 1272
TatI	WGTACW	1 cut(s)	1231
TfiI	GAWTC	5 cut(s)	83, 607, 845, 1204, 1250
Tru1I	TTAA	3 cut(s)	171, 839, 1275
Tru9I	TTAA	3 cut(s)	171, 839, 1275
TseI	GCWGC	5 cut(s)	202, 547, 550, 944, 947
TspDTI	ATGAA	8 cut(s)	21, 72, 109, 184, 305, 428, 456, 944
TspGWI	ACGGA	1 cut(s)	950
VpaK11BI	GGWCC	2 cut(s)	346, 523
VspI	ATTAAT	1 cut(s)	1275
XapI	RAATTY	1 cut(s)	248
XceI	RCATGY	2 cut(s)	541, 886
XhoI	CTCGAG	1 cut(s)	576
XmnI	GAANNNNTTC	6 cut(s)	976, 1024, 1048, 1072, 1096, 1249
XspI	CTAG	5 cut(s)	189, 1017, 1041, 1065, 1089

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.