Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0002221

Physical Location & Seq

Genomic Coordinates Reverse (-)

8143921 .. 8148946

Gene Structure 5026 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG101500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1362 bp

ATGGATGAAGTTCAAGGCGTTTCTGGATCTCTACCTCCTTTTCTTTCCAAGACATATGAAATGGTGGATGATTGTTCGACTGATTCAATTGTGTCTTGGAGTGCGAGTAATAGAAGCTTCATTGTCTGGAACCCTCCGGAGTTCTCCAGAGATTTGTTGCCAAAGTATTTTAAGCACAACAACTTCTCTAGCTTCATTAGGCAGCTCAACACATATGGTTTTCGAAAGATTGATCCGGAGCAATGGGAATTCGCGAATGATGATTTTGTTAGAGGTCAGCCACAGCTTATGAAGAACATCCACAGACGAAAGCCGGTGCATAGTCATTCTGTGCCGAACCTCCAGGTCCAAGGACAAGGACAAGGGAGTTCATCGTTGTCTGAAGCTGAAAGGAAGAGTATGAAGGATGAGATTGAGAGGCTGAACCATGAAAAAGAACGCCTTGCTGTGGAGTTACAGAGGCACGAGCAGGAAAGGCAGGGAATGGAGTTGCAAATGCAGTTCTTGAAGGACCGCTTGCAACATATGCAACGGCAGCAGCAAACCATGGCGTCTGTTGTGGCTCGAGTTTTGCAGAGACCAGACATTGCCTTGAATCCTTTACCGCAGTTTGAACTCTGTGGCCGGAAGAGGAGGTTTTCAAGTGTCGATTTGGCCTATGATCAGGTCAGCATTGGAAGTGGTCAGATGGGGAGTTGGGAAAATGTAACTGGAGGAAATATGGAGATGGGAAAGGTACTGCAATTGGAGTCATTCCTGACATTTTGGGAAGATACCATTCACGATGTTGCTGAGACTCAACTTCAGGCTAATACAAACATGGAGTTAACTGAATCTACAAGTTGTGCCGAAAGCCCAGCTGTATCCTGCATGCAACGTATTGTTGACCATCAATCTAAATCCCCCACAGCAATTGATATGAATACGGAGCCAGCTGCAGCTGTTTCTCCTGTGCCTGCTCGAAGTGTTTCTCCTGCACCTGCTGGGAGTGTTTCTCTTGAGCGTGCTAGAAGTGTTTCTGCCGAGCCTACTAGAAGTGTTTCTCTTGAGTGTGCTAGAAGTGTTTCTCCTGAGCCTACTAGAAGTGTTTCTCTTGAGCCTGATGCCTCAAAACAACAACCCTCAAAAGAACAAACAGCTAAAATTACTGGTGCCGGGGTCAATGACTTGTTTTGGGAACAGTTCTTGACAGAGAATCCCGGTTCAACAGACTCTCAGGAAGTACAGTTAGAAAGAAACGATTCCGATGGTAGGGGGAACGAAATTAATCCAAGTGATCATGGCAAGTTGTGGTGGAATATGAGGAATGTAAATAACCTTACAGAACAGATGGGGCATCTCAGTCCAGTAGAGAAAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006979 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046983 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HSF_DNA-bind

Protein Analysis

453

Amino Acids

50.99

Weight (kDa)

5.37

Isoelectric Point (pI)

58.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSF_DNA-bind	PF00447	14 - 103	2e-30	HSF-type DNA-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002221)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18880 AT5G45710 AT5G45710 AT5G45710 AT5G45710
fragaria_vesca	FvH4_3g07170 FvH4_3g07170 FvH4_6g27900
malus_domestica	MD00G1007800.v1.1 MD09G1233700.v1.1 MD10G1274400.v1.1 MD17G1230100.v1.1
prunus_persica	Prupe.3G108700_v2.0.a1 Prupe.3G108700_v2.0.a1 Prupe.4G068100_v2.0.a1 Prupe.4G068100_v2.0.a1 Prupe.4G068100_v2.0.a1 Prupe.4G068100_v2.0.a1 Prupe.4G068100_v2.0.a1
pyrus_communis	pycom05g27300 pycom09g15200 pycom10g22900 pycom17g23300
rosa_chinensis	RchiOBHm_Chr2g0131371 RchiOBHm_Chr5g0011961
rosa_laevigata	RLG00000019181 RLG00000031873
rosa_multiflora	Rmu_sc0001475.1_g000001 Rmu_ssc0000009.1_g000034
rosa_roxburghii	Rroxscaffold_1G00064630 Rroxscaffold_2G00113040
rosa_rugosa	Rorug02G0296200 Rorug04G0460200
rosa_samantha	Rh2AG349500 Rh2BG356400 Rh2CG335300 Rh2DG374300 Rh5AG091800 Rh5BG087700 Rh5CG101500 Rh5DG088300
rosa_wichuraiana	Rw2G028360 Rw5G008020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	988
Acc36I	ACCTGC	1 cut(s)	988
AccB1I	GGYRCC	1 cut(s)	1151
AccII	CGCG	1 cut(s)	254
AccIII	TCCGGA	2 cut(s)	136, 235
AciI	CCGC	2 cut(s)	514, 605
AclWI	GGATC	2 cut(s)	34, 227
AcoI	YGGCCR	1 cut(s)	622
AcsI	RAATTY	1 cut(s)	248
AcuI	CTGAAG	2 cut(s)	402, 788
AcyI	GRCGYC	1 cut(s)	551
AfaI	GTAC	2 cut(s)	738, 1224
AfiI	CCNNNNNNNGG	2 cut(s)	448, 1251
AgsI	TTSAA	7 cut(s)	14, 87, 508, 595, 614, 642, 1206
AjnI	CCWGG	1 cut(s)	342
AluBI	AGCT	9 cut(s)	117, 192, 205, 286, 386, 860, 935, 941, 1139
AluI	AGCT	9 cut(s)	117, 192, 205, 286, 386, 860, 935, 941, 1139
Alw26I	GTCTC	2 cut(s)	571, 788
AlwI	GGATC	2 cut(s)	34, 227
Ama87I	CYCGRG	1 cut(s)	564
Aor13HI	TCCGGA	2 cut(s)	136, 235
AoxI	GGCC	2 cut(s)	622, 654
ApeKI	GCWGC	5 cut(s)	202, 535, 538, 935, 938
ApoI	RAATTY	1 cut(s)	248
AseI	ATTAAT	1 cut(s)	1266
Asp700I	GAANNNNTTC	6 cut(s)	967, 1015, 1039, 1063, 1087, 1240
AspS9I	GGNCC	2 cut(s)	346, 511
AsuC2I	CCSGG	2 cut(s)	1156, 1200
AsuII	TTCGAA	1 cut(s)	223
AvaI	CYCGRG	1 cut(s)	564
AvaII	GGWCC	2 cut(s)	346, 511
BanI	GGYRCC	1 cut(s)	1151
BauI	CACGAG	1 cut(s)	464
BbvI	GCAGC	5 cut(s)	214, 547, 550, 922, 950
BccI	CCATC	5 cut(s)	682, 721, 897, 1241, 1324
BceAI	ACGGC	1 cut(s)	548
BciT130I	CCWGG	1 cut(s)	344
BciVI	GTATCC	1 cut(s)	874
BclI	TGATCA	2 cut(s)	661, 1276
BcnI	CCSGG	2 cut(s)	1156, 1200
BcoDI	GTCTC	2 cut(s)	571, 788
BfaI	CTAG	5 cut(s)	189, 1008, 1032, 1056, 1080
BfmI	CTRYAG	1 cut(s)	936
BfuAI	ACCTGC	1 cut(s)	988
BfuI	GTATCC	1 cut(s)	874
BisI	GCNGC	5 cut(s)	203, 536, 539, 936, 939
BlsI	GCNGC	5 cut(s)	204, 537, 540, 937, 940
Bme1390I	CCNGG	3 cut(s)	344, 1156, 1200
Bme18I	GGWCC	2 cut(s)	346, 511
BmeT110I	CYCGRG	1 cut(s)	564
BmgT120I	GGNCC	2 cut(s)	346, 511
BmiI	GGNNCC	3 cut(s)	131, 930, 1153
BmrFI	CCNGG	3 cut(s)	344, 1156, 1200
BmsI	GCATC	2 cut(s)	1093, 1345
BplI	GAGNNNNNCTC	2 cut(s)	979, 1011
BpmI	CTGGAG	3 cut(s)	130, 326, 732
Bpu10I	CCTNAGC	1 cut(s)	1071
Bpu14I	TTCGAA	1 cut(s)	223
BpuEI	CTTGAG	3 cut(s)	1019, 1067, 1115
BpuMI	CCSGG	2 cut(s)	1156, 1200
BsaHI	GRCGYC	1 cut(s)	551
BsaI	GGTCTC	1 cut(s)	571
BsaJI	CCNNGG	3 cut(s)	349, 546, 1155
BsaWI	WCCGGW	2 cut(s)	136, 235
BsaXI	ACNNNNNCTCC	2 cut(s)	91, 121
Bsc4I	CCNNNNNNNGG	2 cut(s)	448, 1251
Bse118I	RCCGGY	1 cut(s)	313
Bse1I	ACTGG	3 cut(s)	715, 1153, 1346
Bse3DI	GCAATG	2 cut(s)	248, 585
BseAI	TCCGGA	2 cut(s)	136, 235
BseBI	CCWGG	1 cut(s)	344
BseDI	CCNNGG	3 cut(s)	349, 546, 1155
BseGI	GGATG	4 cut(s)	10, 73, 297, 412
BseLI	CCNNNNNNNGG	2 cut(s)	448, 1251
BseMI	GCAATG	2 cut(s)	248, 585
BseMII	CTCAG	4 cut(s)	783, 1062, 1229, 1354
BseNI	ACTGG	3 cut(s)	715, 1153, 1346
BseRI	GAGGAG	1 cut(s)	646
BseXI	GCAGC	5 cut(s)	214, 547, 550, 922, 950
BseYI	CCCAGC	2 cut(s)	856, 983
BsgI	GTGCAG	1 cut(s)	960
Bsh1236I	CGCG	1 cut(s)	254
BshFI	GGCC	2 cut(s)	624, 656
BshNI	GGYRCC	1 cut(s)	1151
BsiHKCI	CYCGRG	1 cut(s)	564
BsiSI	CCGG	6 cut(s)	137, 236, 314, 625, 1155, 1200
BslI	CCNNNNNNNGG	2 cut(s)	448, 1251
BsmAI	GTCTC	2 cut(s)	571, 788
BsnI	GGCC	2 cut(s)	624, 656
Bso31I	GGTCTC	1 cut(s)	571
BsoBI	CYCGRG	1 cut(s)	564
Bsp119I	TTCGAA	1 cut(s)	223
Bsp13I	TCCGGA	2 cut(s)	136, 235
Bsp143I	GATC	4 cut(s)	26, 232, 661, 1276
Bsp19I	CCATGG	1 cut(s)	546
Bsp68I	TCGCGA	1 cut(s)	254
BspACI	CCGC	2 cut(s)	514, 605
BspANI	GGCC	2 cut(s)	624, 656
BspCNI	CTCAG	4 cut(s)	784, 1063, 1228, 1353
BspEI	TCCGGA	2 cut(s)	136, 235
BspFNI	CGCG	1 cut(s)	254
BspLI	GGNNCC	3 cut(s)	131, 930, 1153
BspMAI	CTGCAG	1 cut(s)	940
BspMI	ACCTGC	1 cut(s)	988
BspPI	GGATC	2 cut(s)	34, 227
BspT104I	TTCGAA	1 cut(s)	223
BspT107I	GGYRCC	1 cut(s)	1151
BspTNI	GGTCTC	1 cut(s)	571
BsrDI	GCAATG	2 cut(s)	248, 585
BsrFI	RCCGGY	1 cut(s)	313
BsrI	ACTGG	3 cut(s)	715, 1153, 1346
BssAI	RCCGGY	1 cut(s)	313
BssECI	CCNNGG	3 cut(s)	349, 546, 1155
BssMI	GATC	4 cut(s)	26, 232, 661, 1276
BssNI	GRCGYC	1 cut(s)	551
BssSI	CACGAG	1 cut(s)	464
BssT1I	CCWWGG	2 cut(s)	349, 546
Bst2BI	CACGAG	1 cut(s)	464
Bst2UI	CCWGG	1 cut(s)	344
Bst4CI	ACNGT	2 cut(s)	1182, 1227
Bst6I	CTCTTC	2 cut(s)	389, 623
BstACI	GRCGYC	1 cut(s)	551
BstAPI	GCANNNNNTGC	1 cut(s)	526
BstBI	TTCGAA	1 cut(s)	223
BstC8I	GCNNGC	5 cut(s)	518, 872, 933, 957, 1005
BstDEI	CTNAG	4 cut(s)	792, 1071, 1215, 1340
BstDSI	CCRYGG	1 cut(s)	546
BstF5I	GGATG	4 cut(s)	10, 73, 297, 412
BstFNI	CGCG	1 cut(s)	254
BstKTI	GATC	4 cut(s)	29, 235, 664, 1279
BstMAI	GTCTC	2 cut(s)	571, 788
BstMBI	GATC	4 cut(s)	26, 232, 661, 1276
BstMWI	GCNNNNNNNGC	3 cut(s)	475, 526, 535
BstNI	CCWGG	1 cut(s)	344
BstNSI	RCATGY	1 cut(s)	874
BstSCI	CCNGG	3 cut(s)	342, 1154, 1198
BstSFI	CTRYAG	1 cut(s)	936
BstUI	CGCG	1 cut(s)	254
BstV1I	GCAGC	5 cut(s)	214, 547, 550, 922, 950
BstX2I	RGATCY	1 cut(s)	26
BstYI	RGATCY	1 cut(s)	26
BsuI	GTATCC	1 cut(s)	874
BsuRI	GGCC	2 cut(s)	624, 656
BtgI	CCRYGG	1 cut(s)	546
BtsCI	GGATG	4 cut(s)	10, 73, 297, 412
BtuMI	TCGCGA	1 cut(s)	254
BveI	ACCTGC	1 cut(s)	988
Cac8I	GCNNGC	5 cut(s)	518, 872, 933, 957, 1005
Cfr10I	RCCGGY	1 cut(s)	313
Cfr13I	GGNCC	2 cut(s)	346, 511
CseI	GACGC	1 cut(s)	540
Csp6I	GTAC	2 cut(s)	737, 1223
CspCI	CAANNNNNGTGG	2 cut(s)	895, 930
CviAII	CATG	6 cut(s)	428, 547, 820, 871, 1280, 1359
CviQI	GTAC	2 cut(s)	737, 1223
DdeI	CTNAG	4 cut(s)	792, 1071, 1215, 1340
DpnI	GATC	4 cut(s)	28, 234, 663, 1278
DpnII	GATC	4 cut(s)	26, 232, 661, 1276
EaeI	YGGCCR	1 cut(s)	622
Eam1104I	CTCTTC	2 cut(s)	389, 623
EarI	CTCTTC	2 cut(s)	389, 623
Eco130I	CCWWGG	2 cut(s)	349, 546
Eco31I	GGTCTC	1 cut(s)	571
Eco47I	GGWCC	2 cut(s)	346, 511
Eco57I	CTGAAG	2 cut(s)	402, 788
Eco88I	CYCGRG	1 cut(s)	564
EcoRI	GAATTC	1 cut(s)	248
EcoRII	CCWGG	1 cut(s)	342
EcoT14I	CCWWGG	2 cut(s)	349, 546
ErhI	CCWWGG	2 cut(s)	349, 546
FaeI	CATG	6 cut(s)	431, 550, 823, 874, 1283, 1362
FalI	AAGNNNNNCTT	4 cut(s)	426, 458, 500, 532
FatI	CATG	6 cut(s)	427, 546, 819, 870, 1279, 1358
FauNDI	CATATG	3 cut(s)	55, 214, 525
FbaI	TGATCA	2 cut(s)	661, 1276
Fnu4HI	GCNGC	5 cut(s)	203, 536, 539, 936, 939
FokI	GGATG	4 cut(s)	17, 80, 284, 419
Fsp4HI	GCNGC	5 cut(s)	203, 536, 539, 936, 939
FspBI	CTAG	5 cut(s)	189, 1008, 1032, 1056, 1080
GluI	GCNGC	5 cut(s)	203, 536, 539, 936, 939
GsaI	CCCAGC	2 cut(s)	860, 987
GsuI	CTGGAG	3 cut(s)	130, 326, 732
HaeIII	GGCC	2 cut(s)	624, 656
HapII	CCGG	6 cut(s)	137, 236, 314, 625, 1155, 1200
HgaI	GACGC	1 cut(s)	540
Hin1I	GRCGYC	1 cut(s)	551
Hin1II	CATG	6 cut(s)	431, 550, 823, 874, 1283, 1362
HincII	GTYRAC	2 cut(s)	828, 886
HindII	GTYRAC	2 cut(s)	828, 886
HindIII	AAGCTT	1 cut(s)	115
HinfI	GANTC	8 cut(s)	83, 595, 749, 796, 833, 1195, 1211, 1241
HpaI	GTTAAC	1 cut(s)	828
HpaII	CCGG	6 cut(s)	137, 236, 314, 625, 1155, 1200
Hpy166II	GTNNAC	2 cut(s)	828, 886
Hpy188I	TCNGA	3 cut(s)	382, 687, 1246
Hpy8I	GTNNAC	2 cut(s)	828, 886
HpyAV	CCTTC	2 cut(s)	397, 502
HpyCH4III	ACNGT	2 cut(s)	1182, 1227
HpyCH4IV	ACGT	1 cut(s)	877
HpyF10VI	GCNNNNNNNGC	3 cut(s)	475, 526, 535
HpyF3I	CTNAG	4 cut(s)	792, 1071, 1215, 1340
HpySE526I	ACGT	1 cut(s)	877
Hsp92I	GRCGYC	1 cut(s)	551
Hsp92II	CATG	6 cut(s)	431, 550, 823, 874, 1283, 1362
Kpn2I	TCCGGA	2 cut(s)	136, 235
Ksp22I	TGATCA	2 cut(s)	661, 1276
KspAI	GTTAAC	1 cut(s)	828
Kzo9I	GATC	4 cut(s)	26, 232, 661, 1276
LmnI	GCTCC	2 cut(s)	238, 928
Lsp1109I	GCAGC	5 cut(s)	214, 547, 550, 922, 950
LweI	GCATC	2 cut(s)	1093, 1345
MaeI	CTAG	5 cut(s)	189, 1008, 1032, 1056, 1080
MaeII	ACGT	1 cut(s)	877
MaeIII	GTNAC	2 cut(s)	453, 706
MalI	GATC	4 cut(s)	28, 234, 663, 1278
MboI	GATC	4 cut(s)	26, 232, 661, 1276
MboII	GAAGA	4 cut(s)	304, 406, 640, 782
MfeI	CAATTG	3 cut(s)	87, 743, 912
MflI	RGATCY	1 cut(s)	26
MluCI	AATT	6 cut(s)	87, 248, 743, 912, 1143, 1263
MlyI	GAGTC	3 cut(s)	758, 790, 1205
MroI	TCCGGA	2 cut(s)	136, 235
MroXI	GAANNNNTTC	6 cut(s)	967, 1015, 1039, 1063, 1087, 1240
MseI	TTAA	3 cut(s)	171, 827, 1266
MspA1I	CMGCKG	3 cut(s)	860, 935, 941
MspI	CCGG	6 cut(s)	137, 236, 314, 625, 1155, 1200
MspR9I	CCNGG	3 cut(s)	344, 1156, 1200
MunI	CAATTG	3 cut(s)	87, 743, 912
MvaI	CCWGG	1 cut(s)	344
MvnI	CGCG	1 cut(s)	254
MwoI	GCNNNNNNNGC	3 cut(s)	475, 526, 535
NciI	CCSGG	2 cut(s)	1156, 1200
NcoI	CCATGG	1 cut(s)	546
NdeI	CATATG	3 cut(s)	55, 214, 525
NdeII	GATC	4 cut(s)	26, 232, 661, 1276
NlaIII	CATG	6 cut(s)	431, 550, 823, 874, 1283, 1362
NlaIV	GGNNCC	3 cut(s)	131, 930, 1153
NmeAIII	GCCGAG	1 cut(s)	1048
NruI	TCGCGA	1 cut(s)	254
NspI	RCATGY	1 cut(s)	874
NspV	TTCGAA	1 cut(s)	223
PaeI	GCATGC	1 cut(s)	874
PaeR7I	CTCGAG	1 cut(s)	564
PaqCI	CACCTGC	1 cut(s)	988
PdmI	GAANNNNTTC	6 cut(s)	967, 1015, 1039, 1063, 1087, 1240
PfeI	GAWTC	5 cut(s)	83, 595, 833, 1195, 1241
PkrI	GCNGC	5 cut(s)	204, 537, 540, 937, 940
PleI	GAGTC	3 cut(s)	757, 790, 1205
PpsI	GAGTC	3 cut(s)	757, 790, 1205
PshBI	ATTAAT	1 cut(s)	1266
Psp6I	CCWGG	1 cut(s)	342
PspFI	CCCAGC	2 cut(s)	856, 983
PspGI	CCWGG	1 cut(s)	342
PspN4I	GGNNCC	3 cut(s)	131, 930, 1153
PspPI	GGNCC	2 cut(s)	346, 511
PspXI	VCTCGAGB	1 cut(s)	564
PstI	CTGCAG	1 cut(s)	940
PsuI	RGATCY	1 cut(s)	26
PvuII	CAGCTG	3 cut(s)	860, 935, 941
RruI	TCGCGA	1 cut(s)	254
RsaI	GTAC	2 cut(s)	738, 1224
RsaNI	GTAC	2 cut(s)	737, 1223
SaqAI	TTAA	3 cut(s)	171, 827, 1266
SatI	GCNGC	5 cut(s)	203, 536, 539, 936, 939
Sau3AI	GATC	4 cut(s)	26, 232, 661, 1276
Sau96I	GGNCC	2 cut(s)	346, 511
SchI	GAGTC	3 cut(s)	758, 790, 1205
ScrFI	CCNGG	3 cut(s)	344, 1156, 1200
SfaNI	GCATC	2 cut(s)	1093, 1345
SfcI	CTRYAG	1 cut(s)	936
Sfr274I	CTCGAG	1 cut(s)	564
SfuI	TTCGAA	1 cut(s)	223
SinI	GGWCC	2 cut(s)	346, 511
SlaI	CTCGAG	1 cut(s)	564
SmlI	CTYRAG	4 cut(s)	564, 998, 1046, 1094
SmoI	CTYRAG	4 cut(s)	564, 998, 1046, 1094
SphI	GCATGC	1 cut(s)	874
Sse9I	AATT	6 cut(s)	87, 248, 743, 912, 1143, 1263
SsiI	CCGC	2 cut(s)	514, 605
SspMI	CTAG	5 cut(s)	189, 1008, 1032, 1056, 1080
StyD4I	CCNGG	3 cut(s)	342, 1154, 1198
StyI	CCWWGG	2 cut(s)	349, 546
TaaI	ACNGT	2 cut(s)	1182, 1227
TaiI	ACGT	1 cut(s)	880
TaqI	TCGA	5 cut(s)	77, 223, 565, 648, 961
TasI	AATT	6 cut(s)	87, 248, 743, 912, 1143, 1263
TatI	WGTACW	1 cut(s)	1222
TfiI	GAWTC	5 cut(s)	83, 595, 833, 1195, 1241
Tru1I	TTAA	3 cut(s)	171, 827, 1266
Tru9I	TTAA	3 cut(s)	171, 827, 1266
TseI	GCWGC	5 cut(s)	202, 535, 538, 935, 938
TspDTI	ATGAA	9 cut(s)	21, 72, 109, 184, 305, 360, 416, 444, 935
TspGWI	ACGGA	1 cut(s)	941
VpaK11BI	GGWCC	2 cut(s)	346, 511
VspI	ATTAAT	1 cut(s)	1266
XapI	RAATTY	1 cut(s)	248
XceI	RCATGY	1 cut(s)	874
XhoI	CTCGAG	1 cut(s)	564
XmnI	GAANNNNTTC	6 cut(s)	967, 1015, 1039, 1063, 1087, 1240
XspI	CTAG	5 cut(s)	189, 1008, 1032, 1056, 1080

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.