Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0002221

Physical Location & Seq

Genomic Coordinates Reverse (-)

7601317 .. 7602825

Gene Structure 1509 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG087700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1368 bp

ATGGATGAAGTTCAAGGCGTTTCTGGATCTTTACCTCCTTTTCTTTCGAAGACATATGAAATGGTGGATGATTGTTCGATTGATTCGATTGTGTCTTGGAGTGCGAGTAATAGAAGCTTCATTGTCTGGAACCCTCCGGAGTTCGCCAGAGATTTGTTGCCAAAGTATTTTAAGCACAACAACTTCTCTAGCTTCATTAGGCAGCTCAACACATATGGTTTTCGAAAGATTGATCCGGAGCAATGGGAATTCGCGAACGATGATTTTGTTAGAGGTCAGCCACAGCTTATGAAGAACATCCATAGAAGAAAGCCGGTGCATAGTCATTCTGTGCCGAACCTCCAGGTCCAAGGACAAGGACAAGGACAAGGACAAGGGAGTTCATCGTTGTCTGAAGCTGAAAGGAAGAGTATGAAGGATGAGATTGAGAGGCTTAACCATGAAAAAGAACGCCTTGCGGTGGAGTTACAGAGGCATGAGCAGGAAAGGCAGGGAATGGAGTTGCAAATGCAGTTCTTGAAGGACCGCTTGCAACATATGCAACGGCAGCAGCAAACCATGGTGTCTGTTGTGGCTCGAGTTTTGCAGAGACCAGACATTGCCTTGAATCCTGTACCGCAGTTTGAACTCTGTGGCCGGAAGAGGAGGTTTTCAAGTGTCGATTTGGCCTATGATCAGGTCAGCATTGGAAGTGGTCAGATGGGGAGTCGGGAAAATGTAACTAGAGGAAGTATGGAGACGGGAAAGGTACTGCAATTGGAGTCATTCCTGACATTTTGGGAAGATACCATTCACGATGTTGCTGAGACTCAACTTCAGGCTAATACAAACATGGAGTTAACTGAATCTACAAGTTGTGCCGAAAGCCCAGCTGTATCCTGCATGCAACGTATTGTTGACCATCAATCTAAATCCACAGCAATTGATATGAATACGGAGCCTGCTGCAGCTGTTTCTCCTGTGCCTGCTCGAAGTGTTTCTCCTGCACCTGTTGGGAGTGTTTCTCTTGAGCGTGCTAGAAGTGTTTCTCCCGAGCCTACAAGAAGTGTTTCTCTTGAGTGTGCTAGAAGTGTTTCTCCTGAGCCTGCTAGAAGTGTTTCTCTTGAGCCTGATGCCTCAAAACAACAACCCTCAAAAGAACAAACAGCTAAAATTACTGGTGCCGGGGTCAATGACTTGTTTTGGGAACAGTTCTTGACAGAGAATCCCGGTTCAACAGACTCTCAGGAAGTACAGTTAGAAAACGATTCCGATGGTAGGGGGAACGAAATTAATCCAAGTGATCATGGCAAGTTGTGGTGGAATATGAGGAATGTAAATAACCTTACAGAACAGATGGGGCATCTCAGTCCAGTAGAGAAAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006979 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046983 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HSF_DNA-bind

Protein Analysis

455

Amino Acids

51.15

Weight (kDa)

5.44

Isoelectric Point (pI)

58.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSF_DNA-bind	PF00447	14 - 103	3.1e-30	HSF-type DNA-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002221)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18880 AT5G45710 AT5G45710 AT5G45710 AT5G45710
fragaria_vesca	FvH4_3g07170 FvH4_3g07170 FvH4_6g27900
malus_domestica	MD00G1007800.v1.1 MD09G1233700.v1.1 MD10G1274400.v1.1 MD17G1230100.v1.1
prunus_persica	Prupe.3G108700_v2.0.a1 Prupe.3G108700_v2.0.a1 Prupe.4G068100_v2.0.a1 Prupe.4G068100_v2.0.a1 Prupe.4G068100_v2.0.a1 Prupe.4G068100_v2.0.a1 Prupe.4G068100_v2.0.a1
pyrus_communis	pycom05g27300 pycom09g15200 pycom10g22900 pycom17g23300
rosa_chinensis	RchiOBHm_Chr2g0131371 RchiOBHm_Chr5g0011961
rosa_laevigata	RLG00000019181 RLG00000031873
rosa_multiflora	Rmu_sc0001475.1_g000001 Rmu_ssc0000009.1_g000034
rosa_roxburghii	Rroxscaffold_1G00064630 Rroxscaffold_2G00113040
rosa_rugosa	Rorug02G0296200 Rorug04G0460200
rosa_samantha	Rh2AG349500 Rh2BG356400 Rh2CG335300 Rh2DG374300 Rh5AG091800 Rh5BG087700 Rh5CG101500 Rh5DG088300
rosa_wichuraiana	Rw2G028360 Rw5G008020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1160
AccII	CGCG	1 cut(s)	254
AccIII	TCCGGA	2 cut(s)	136, 235
AciI	CCGC	3 cut(s)	458, 526, 617
AclWI	GGATC	2 cut(s)	34, 227
AcoI	YGGCCR	1 cut(s)	634
AcsI	RAATTY	1 cut(s)	248
AcuI	CTGAAG	2 cut(s)	414, 800
AfaI	GTAC	3 cut(s)	615, 750, 1233
AfiI	CCNNNNNNNGG	2 cut(s)	460, 1257
AgsI	TTSAA	6 cut(s)	14, 520, 607, 626, 654, 1215
AjnI	CCWGG	1 cut(s)	342
AluBI	AGCT	8 cut(s)	117, 192, 205, 286, 398, 872, 950, 1148
AluI	AGCT	8 cut(s)	117, 192, 205, 286, 398, 872, 950, 1148
Alw26I	GTCTC	3 cut(s)	583, 731, 800
AlwI	GGATC	2 cut(s)	34, 227
Ama87I	CYCGRG	2 cut(s)	576, 1031
Aor13HI	TCCGGA	2 cut(s)	136, 235
AoxI	GGCC	2 cut(s)	634, 666
ApeKI	GCWGC	5 cut(s)	202, 547, 550, 944, 947
ApoI	RAATTY	1 cut(s)	248
AseI	ATTAAT	1 cut(s)	1272
Asp700I	GAANNNNTTC	5 cut(s)	976, 1024, 1048, 1072, 1096
AspS9I	GGNCC	2 cut(s)	346, 523
AsuC2I	CCSGG	2 cut(s)	1165, 1209
AsuII	TTCGAA	2 cut(s)	47, 223
AvaI	CYCGRG	2 cut(s)	576, 1031
AvaII	GGWCC	2 cut(s)	346, 523
BanI	GGYRCC	1 cut(s)	1160
BbsI	GAAGAC	1 cut(s)	56
BbvI	GCAGC	5 cut(s)	214, 559, 562, 931, 959
BccI	CCATC	4 cut(s)	694, 909, 1247, 1330
BceAI	ACGGC	1 cut(s)	560
BciT130I	CCWGG	1 cut(s)	344
BciVI	GTATCC	1 cut(s)	886
BclI	TGATCA	2 cut(s)	673, 1282
BcnI	CCSGG	2 cut(s)	1165, 1209
BcoDI	GTCTC	3 cut(s)	583, 731, 800
BfaI	CTAG	5 cut(s)	189, 723, 1017, 1065, 1089
BfmI	CTRYAG	1 cut(s)	945
BfuI	GTATCC	1 cut(s)	886
BisI	GCNGC	5 cut(s)	203, 548, 551, 945, 948
BlsI	GCNGC	5 cut(s)	204, 549, 552, 946, 949
Bme1390I	CCNGG	3 cut(s)	344, 1165, 1209
Bme18I	GGWCC	2 cut(s)	346, 523
BmeT110I	CYCGRG	2 cut(s)	576, 1031
BmgT120I	GGNCC	2 cut(s)	346, 523
BmiI	GGNNCC	3 cut(s)	131, 939, 1162
BmrFI	CCNGG	3 cut(s)	344, 1165, 1209
BmsI	GCATC	2 cut(s)	1102, 1351
BpiI	GAAGAC	1 cut(s)	56
BplI	GAGNNNNNCTC	2 cut(s)	988, 1020
BpmI	CTGGAG	1 cut(s)	326
Bpu10I	CCTNAGC	1 cut(s)	1080
Bpu14I	TTCGAA	2 cut(s)	47, 223
BpuEI	CTTGAG	3 cut(s)	1028, 1076, 1124
BpuMI	CCSGG	2 cut(s)	1165, 1209
BsaI	GGTCTC	1 cut(s)	583
BsaJI	CCNNGG	3 cut(s)	349, 558, 1164
BsaWI	WCCGGW	2 cut(s)	136, 235
BsaXI	ACNNNNNCTCC	2 cut(s)	91, 121
Bsc4I	CCNNNNNNNGG	2 cut(s)	460, 1257
Bse118I	RCCGGY	1 cut(s)	313
Bse1I	ACTGG	2 cut(s)	1162, 1352
Bse3DI	GCAATG	2 cut(s)	248, 597
BseAI	TCCGGA	2 cut(s)	136, 235
BseBI	CCWGG	1 cut(s)	344
BseDI	CCNNGG	3 cut(s)	349, 558, 1164
BseGI	GGATG	4 cut(s)	10, 73, 297, 424
BseLI	CCNNNNNNNGG	2 cut(s)	460, 1257
BseMI	GCAATG	2 cut(s)	248, 597
BseMII	CTCAG	4 cut(s)	795, 1071, 1238, 1360
BseNI	ACTGG	2 cut(s)	1162, 1352
BseRI	GAGGAG	1 cut(s)	658
BseXI	GCAGC	5 cut(s)	214, 559, 562, 931, 959
BseYI	CCCAGC	1 cut(s)	868
BsgI	GTGCAG	1 cut(s)	969
Bsh1236I	CGCG	1 cut(s)	254
BshFI	GGCC	2 cut(s)	636, 668
BshNI	GGYRCC	1 cut(s)	1160
BsiHKCI	CYCGRG	2 cut(s)	576, 1031
BsiSI	CCGG	6 cut(s)	137, 236, 314, 637, 1164, 1209
BslI	CCNNNNNNNGG	2 cut(s)	460, 1257
BsmAI	GTCTC	3 cut(s)	583, 731, 800
BsmBI	CGTCTC	1 cut(s)	731
BsnI	GGCC	2 cut(s)	636, 668
Bso31I	GGTCTC	1 cut(s)	583
BsoBI	CYCGRG	2 cut(s)	576, 1031
Bsp119I	TTCGAA	2 cut(s)	47, 223
Bsp13I	TCCGGA	2 cut(s)	136, 235
Bsp143I	GATC	4 cut(s)	26, 232, 673, 1282
Bsp19I	CCATGG	1 cut(s)	558
Bsp68I	TCGCGA	1 cut(s)	254
BspACI	CCGC	3 cut(s)	458, 526, 617
BspANI	GGCC	2 cut(s)	636, 668
BspCNI	CTCAG	4 cut(s)	796, 1072, 1237, 1359
BspEI	TCCGGA	2 cut(s)	136, 235
BspFNI	CGCG	1 cut(s)	254
BspLI	GGNNCC	3 cut(s)	131, 939, 1162
BspMAI	CTGCAG	1 cut(s)	949
BspPI	GGATC	2 cut(s)	34, 227
BspT104I	TTCGAA	2 cut(s)	47, 223
BspT107I	GGYRCC	1 cut(s)	1160
BspTNI	GGTCTC	1 cut(s)	583
BsrDI	GCAATG	2 cut(s)	248, 597
BsrFI	RCCGGY	1 cut(s)	313
BsrI	ACTGG	2 cut(s)	1162, 1352
BssAI	RCCGGY	1 cut(s)	313
BssECI	CCNNGG	3 cut(s)	349, 558, 1164
BssMI	GATC	4 cut(s)	26, 232, 673, 1282
BssT1I	CCWWGG	2 cut(s)	349, 558
Bst2UI	CCWGG	1 cut(s)	344
Bst4CI	ACNGT	2 cut(s)	1191, 1236
Bst6I	CTCTTC	2 cut(s)	401, 635
BstAPI	GCANNNNNTGC	1 cut(s)	538
BstBI	TTCGAA	2 cut(s)	47, 223
BstC8I	GCNNGC	6 cut(s)	530, 884, 942, 966, 1014, 1086
BstDEI	CTNAG	4 cut(s)	804, 1080, 1224, 1346
BstDSI	CCRYGG	1 cut(s)	558
BstF5I	GGATG	4 cut(s)	10, 73, 297, 424
BstFNI	CGCG	1 cut(s)	254
BstKTI	GATC	4 cut(s)	29, 235, 676, 1285
BstMAI	GTCTC	3 cut(s)	583, 731, 800
BstMBI	GATC	4 cut(s)	26, 232, 673, 1282
BstMWI	GCNNNNNNNGC	3 cut(s)	487, 538, 547
BstNI	CCWGG	1 cut(s)	344
BstNSI	RCATGY	1 cut(s)	886
BstSCI	CCNGG	3 cut(s)	342, 1163, 1207
BstSFI	CTRYAG	1 cut(s)	945
BstUI	CGCG	1 cut(s)	254
BstV1I	GCAGC	5 cut(s)	214, 559, 562, 931, 959
BstV2I	GAAGAC	1 cut(s)	56
BstX2I	RGATCY	1 cut(s)	26
BstYI	RGATCY	1 cut(s)	26
BsuI	GTATCC	1 cut(s)	886
BsuRI	GGCC	2 cut(s)	636, 668
BtgI	CCRYGG	1 cut(s)	558
BtsCI	GGATG	4 cut(s)	10, 73, 297, 424
BtuMI	TCGCGA	1 cut(s)	254
Cac8I	GCNNGC	6 cut(s)	530, 884, 942, 966, 1014, 1086
Cfr10I	RCCGGY	1 cut(s)	313
Cfr13I	GGNCC	2 cut(s)	346, 523
Csp6I	GTAC	3 cut(s)	614, 749, 1232
CspCI	CAANNNNNGTGG	2 cut(s)	904, 939
CviAII	CATG	7 cut(s)	440, 476, 559, 832, 883, 1286, 1365
CviQI	GTAC	3 cut(s)	614, 749, 1232
DdeI	CTNAG	4 cut(s)	804, 1080, 1224, 1346
DpnI	GATC	4 cut(s)	28, 234, 675, 1284
DpnII	GATC	4 cut(s)	26, 232, 673, 1282
EaeI	YGGCCR	1 cut(s)	634
Eam1104I	CTCTTC	2 cut(s)	401, 635
EarI	CTCTTC	2 cut(s)	401, 635
Eco130I	CCWWGG	2 cut(s)	349, 558
Eco31I	GGTCTC	1 cut(s)	583
Eco47I	GGWCC	2 cut(s)	346, 523
Eco57I	CTGAAG	2 cut(s)	414, 800
Eco88I	CYCGRG	2 cut(s)	576, 1031
EcoRI	GAATTC	1 cut(s)	248
EcoRII	CCWGG	1 cut(s)	342
EcoT14I	CCWWGG	2 cut(s)	349, 558
ErhI	CCWWGG	2 cut(s)	349, 558
Esp3I	CGTCTC	1 cut(s)	731
FaeI	CATG	7 cut(s)	443, 479, 562, 835, 886, 1289, 1368
FalI	AAGNNNNNCTT	4 cut(s)	438, 470, 512, 544
FatI	CATG	7 cut(s)	439, 475, 558, 831, 882, 1285, 1364
FauNDI	CATATG	3 cut(s)	55, 214, 537
FbaI	TGATCA	2 cut(s)	673, 1282
Fnu4HI	GCNGC	5 cut(s)	203, 548, 551, 945, 948
FokI	GGATG	4 cut(s)	17, 80, 284, 431
Fsp4HI	GCNGC	5 cut(s)	203, 548, 551, 945, 948
FspBI	CTAG	5 cut(s)	189, 723, 1017, 1065, 1089
GluI	GCNGC	5 cut(s)	203, 548, 551, 945, 948
GsaI	CCCAGC	1 cut(s)	872
GsuI	CTGGAG	1 cut(s)	326
HaeIII	GGCC	2 cut(s)	636, 668
HapII	CCGG	6 cut(s)	137, 236, 314, 637, 1164, 1209
Hin1II	CATG	7 cut(s)	443, 479, 562, 835, 886, 1289, 1368
HincII	GTYRAC	2 cut(s)	840, 898
HindII	GTYRAC	2 cut(s)	840, 898
HindIII	AAGCTT	1 cut(s)	115
HinfI	GANTC	9 cut(s)	83, 607, 706, 761, 808, 845, 1204, 1220, 1247
HpaI	GTTAAC	1 cut(s)	840
HpaII	CCGG	6 cut(s)	137, 236, 314, 637, 1164, 1209
Hpy166II	GTNNAC	2 cut(s)	840, 898
Hpy188I	TCNGA	3 cut(s)	394, 699, 1252
Hpy8I	GTNNAC	2 cut(s)	840, 898
HpyAV	CCTTC	2 cut(s)	409, 514
HpyCH4III	ACNGT	2 cut(s)	1191, 1236
HpyCH4IV	ACGT	1 cut(s)	889
HpyF10VI	GCNNNNNNNGC	3 cut(s)	487, 538, 547
HpyF3I	CTNAG	4 cut(s)	804, 1080, 1224, 1346
HpySE526I	ACGT	1 cut(s)	889
Hsp92II	CATG	7 cut(s)	443, 479, 562, 835, 886, 1289, 1368
Kpn2I	TCCGGA	2 cut(s)	136, 235
Ksp22I	TGATCA	2 cut(s)	673, 1282
KspAI	GTTAAC	1 cut(s)	840
Kzo9I	GATC	4 cut(s)	26, 232, 673, 1282
LmnI	GCTCC	2 cut(s)	238, 937
Lsp1109I	GCAGC	5 cut(s)	214, 559, 562, 931, 959
LweI	GCATC	2 cut(s)	1102, 1351
MaeI	CTAG	5 cut(s)	189, 723, 1017, 1065, 1089
MaeII	ACGT	1 cut(s)	889
MaeIII	GTNAC	2 cut(s)	465, 718
MalI	GATC	4 cut(s)	28, 234, 675, 1284
MboI	GATC	4 cut(s)	26, 232, 673, 1282
MboII	GAAGA	6 cut(s)	61, 304, 318, 418, 652, 794
MfeI	CAATTG	2 cut(s)	755, 921
MflI	RGATCY	1 cut(s)	26
MluCI	AATT	5 cut(s)	248, 755, 921, 1152, 1269
MlyI	GAGTC	4 cut(s)	715, 770, 802, 1214
MroI	TCCGGA	2 cut(s)	136, 235
MroXI	GAANNNNTTC	5 cut(s)	976, 1024, 1048, 1072, 1096
MseI	TTAA	4 cut(s)	171, 435, 839, 1272
MspA1I	CMGCKG	2 cut(s)	872, 950
MspI	CCGG	6 cut(s)	137, 236, 314, 637, 1164, 1209
MspR9I	CCNGG	3 cut(s)	344, 1165, 1209
MunI	CAATTG	2 cut(s)	755, 921
MvaI	CCWGG	1 cut(s)	344
MvnI	CGCG	1 cut(s)	254
MwoI	GCNNNNNNNGC	3 cut(s)	487, 538, 547
NciI	CCSGG	2 cut(s)	1165, 1209
NcoI	CCATGG	1 cut(s)	558
NdeI	CATATG	3 cut(s)	55, 214, 537
NdeII	GATC	4 cut(s)	26, 232, 673, 1282
NlaIII	CATG	7 cut(s)	443, 479, 562, 835, 886, 1289, 1368
NlaIV	GGNNCC	3 cut(s)	131, 939, 1162
NruI	TCGCGA	1 cut(s)	254
NspI	RCATGY	1 cut(s)	886
NspV	TTCGAA	2 cut(s)	47, 223
PaeI	GCATGC	1 cut(s)	886
PaeR7I	CTCGAG	1 cut(s)	576
PcsI	WCGNNNNNNNCGW	1 cut(s)	83
PdmI	GAANNNNTTC	5 cut(s)	976, 1024, 1048, 1072, 1096
PfeI	GAWTC	5 cut(s)	83, 607, 845, 1204, 1247
PkrI	GCNGC	5 cut(s)	204, 549, 552, 946, 949
PleI	GAGTC	4 cut(s)	714, 769, 802, 1214
PpsI	GAGTC	4 cut(s)	714, 769, 802, 1214
PshBI	ATTAAT	1 cut(s)	1272
Psp6I	CCWGG	1 cut(s)	342
PspFI	CCCAGC	1 cut(s)	868
PspGI	CCWGG	1 cut(s)	342
PspN4I	GGNNCC	3 cut(s)	131, 939, 1162
PspPI	GGNCC	2 cut(s)	346, 523
PspXI	VCTCGAGB	1 cut(s)	576
PstI	CTGCAG	1 cut(s)	949
PsuI	RGATCY	1 cut(s)	26
PvuII	CAGCTG	2 cut(s)	872, 950
RruI	TCGCGA	1 cut(s)	254
RsaI	GTAC	3 cut(s)	615, 750, 1233
RsaNI	GTAC	3 cut(s)	614, 749, 1232
SaqAI	TTAA	4 cut(s)	171, 435, 839, 1272
SatI	GCNGC	5 cut(s)	203, 548, 551, 945, 948
Sau3AI	GATC	4 cut(s)	26, 232, 673, 1282
Sau96I	GGNCC	2 cut(s)	346, 523
SchI	GAGTC	4 cut(s)	715, 770, 802, 1214
ScrFI	CCNGG	3 cut(s)	344, 1165, 1209
SfaNI	GCATC	2 cut(s)	1102, 1351
SfcI	CTRYAG	1 cut(s)	945
Sfr274I	CTCGAG	1 cut(s)	576
SfuI	TTCGAA	2 cut(s)	47, 223
SinI	GGWCC	2 cut(s)	346, 523
SlaI	CTCGAG	1 cut(s)	576
SmlI	CTYRAG	4 cut(s)	576, 1007, 1055, 1103
SmoI	CTYRAG	4 cut(s)	576, 1007, 1055, 1103
SphI	GCATGC	1 cut(s)	886
Sse9I	AATT	5 cut(s)	248, 755, 921, 1152, 1269
SsiI	CCGC	3 cut(s)	458, 526, 617
SspMI	CTAG	5 cut(s)	189, 723, 1017, 1065, 1089
StyD4I	CCNGG	3 cut(s)	342, 1163, 1207
StyI	CCWWGG	2 cut(s)	349, 558
TaaI	ACNGT	2 cut(s)	1191, 1236
TaiI	ACGT	1 cut(s)	892
TaqI	TCGA	7 cut(s)	47, 77, 86, 223, 577, 660, 970
TasI	AATT	5 cut(s)	248, 755, 921, 1152, 1269
TatI	WGTACW	1 cut(s)	1231
TfiI	GAWTC	5 cut(s)	83, 607, 845, 1204, 1247
Tru1I	TTAA	4 cut(s)	171, 435, 839, 1272
Tru9I	TTAA	4 cut(s)	171, 435, 839, 1272
TseI	GCWGC	5 cut(s)	202, 547, 550, 944, 947
TspDTI	ATGAA	9 cut(s)	21, 72, 109, 184, 305, 372, 428, 456, 944
TspGWI	ACGGA	1 cut(s)	950
VpaK11BI	GGWCC	2 cut(s)	346, 523
VspI	ATTAAT	1 cut(s)	1272
XapI	RAATTY	1 cut(s)	248
XceI	RCATGY	1 cut(s)	886
XhoI	CTCGAG	1 cut(s)	576
XmnI	GAANNNNTTC	5 cut(s)	976, 1024, 1048, 1072, 1096
XspI	CTAG	5 cut(s)	189, 723, 1017, 1065, 1089

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.