Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002608

Physical Location & Seq

Genomic Coordinates Forward (+)

71757026 .. 71758402

Gene Structure 1377 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00134280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1377 bp

ATGGCTTCGAAGCTTCTAGCTTCAGCTCTCCGCAAAACCCTAACCCCCCATGCCCCCATTTCCAAACCCTCCTCCTTCTTCCGCGCCGCCTCCACCGCCTCCGCCGCGGCCGTCGAGCCGTACGAGGAGGCCGCCGATGGGGTTTATATGAAGGGGGTCAAAATCTCCGGCCGGCCGCTCTACCTGGACATGCAGGCCACGTCGCCGGTGGACCCCAGAGTCGTGGACGCCATGCTCCCCTACTACCTCACCCGCTACGGCAACCCCCACTCCCGGACCCACATGTACGGCTGGGAGTCCGACTCCGCCGTCGAAGCCGCCCGCGCGCAAGTCGCCGACTTAATCGGCGCGTCCCCCAAGGAGATCGTCTTCACCTCCGGCGCCACCGAGTGCAACAACATCTCCGTCAAGGGCGTCATGCACTTCTACAGGGACAAGAAGCGCCACGTCATCACCACCCAGACGGAGCACAAGTGCGTCCTCGACTCCTGCCGCCATCTCCAGCAGGAGGGTTTCGACATCACCTACCTTCCGGTGAAGCCCGACGGGCTCATCGACCTGGACCAGCTCCGGGCCGCGATCCGGCCCGATACCGGACTGGTCTCAGTTATGGCAGTGAACAATGAAATCGGTGTGATTCAACCTATGGAAGAAATCGGAGAAATTTGCAAGGAGTTCAAGATTCCGTTTCATACCGATGCTGCTCAGGCGTTGGGGAAGATTCCGATTGATGTGGATAAATGGAATGTGAGCTTGATGTCGTTGAGTGGGCACAAGGTGTATGGGCCTAAGGGAGTTGGGGCATTGTACATGAGGCGGCGGCCGAGGATTCGGGTGGAGCCTCAGATGAACGGAGGTGGGCAGGAGAGGGGGATAAGGAGCGGGACGGTTCCGACGCCGTTGGTTGTGGGGATGGGGACTGCTTGCGAGATTGCGAAGAAGGAGATGGAGTATGATCAGAAGAGGATTAGTCAGCTGCAGGAGAGGATGCTGAGTGGGATTAGGGAGCAGCTGGATGAGGTGGTGGTAAATGGCAGTATCGAGAGAAGGTACCCGGGGAATTTGAACTTGTCGTTTGCTTATGTGGAGGGGGAGAGCTTGCTGATGGGGTTGAAGGAGGTGGCAGTGTCGAGTGGGAGTGCTTGCACTAGTGCGAGTTTGGAGCCGTCGTATGTGTTGAGGGCGTTGGGGGTGGATGAGGACATGGCGCACACTTCGATTAGGTTTGGGATTGGGAGGTTTACTACCGAGGAGGAGATTGACAGGGCGGTGCAGCTTACAGTGCAGCAGGTGAAGAAGCTGAGGGAGTTGAGTCCGCTTTATGAAATGGTGAAGGAAGGGATTAATATTAAGGATATTCAGTGGTCACAGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006790 GO:0008144 GO:0008150 GO:0008152 GO:0008270 GO:0009987 GO:0016043 GO:0016226 GO:0016740 GO:0016782 GO:0016783 GO:0017076 GO:0022607 GO:0030554 GO:0031071 GO:0031163 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0051186 GO:0071840 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00730 ko01100 ko04122 map00730 map01100 map04122

Pfam Domains

Protein Families

Aminotran_5

Protein Analysis

458

Amino Acids

50.6

Weight (kDa)

6.62

Isoelectric Point (pI)

45.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aminotran_5	PF00266	61 - 422	3e-88	Aminotransferase class-V
Beta_elim_lyase	PF01212	100 - 235	3.6e-10	Beta-eliminating lyase
DegT_DnrJ_EryC1	PF01041	111 - 239	4.2e-07	DegT/DnrJ/EryC1/StrS aminotransferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002608)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65720 AT5G65720 AT5G65720
fragaria_vesca	FvH4_1g18610 FvH4_3g39110 FvH4_4g11530
malus_domestica	MD15G1303800.v1.1
prunus_persica	Prupe.6G213300_v2.0.a1
pyrus_communis	pycom02g15750 pycom02g15760 pycom12g09240 pycom14g03250 pycom15g26680
rosa_chinensis	RchiOBHm_Chr2g0109351 RchiOBHm_Chr2g0109391 RchiOBHm_Chr5g0045361
rosa_laevigata	RLG00000017733
rosa_multiflora	Rmu_sc0000332.1_g000011 Rmu_sc0001940.1_g000003 Rmu_sc0012764.1_g000010
rosa_roxburghii	Rroxscaffold_2G00134280
rosa_rugosa	Rorug02G0159500
rosa_samantha	Rh2AG211300 Rh2AG211600 Rh2BG221300 Rh2BG221400 Rh2BG221500 Rh2BG222000 Rh2CG213300 Rh2CG213900 Rh2DG217100 Rh2DG217400 Rh4BG181900 Rh5AG243200 Rh5BG312000 Rh5DG322600 Rh6CG498200 Rh7BG128000
rosa_wichuraiana	Rw5G028200 Rw5G028360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1279
AasI	GACNNNNNNGTC	2 cut(s)	218, 308
Acc36I	ACCTGC	1 cut(s)	1279
Acc65I	GGTACC	1 cut(s)	1050
AccB1I	GGYRCC	2 cut(s)	380, 1050
AccBSI	CCGCTC	2 cut(s)	178, 882
AccII	CGCG	6 cut(s)	84, 107, 324, 326, 350, 578
AclWI	GGATC	1 cut(s)	574
AcoI	YGGCCR	4 cut(s)	108, 169, 173, 821
AcsI	RAATTY	2 cut(s)	663, 1060
AcuI	CTGAAG	1 cut(s)	6
AcyI	GRCGYC	4 cut(s)	228, 381, 414, 896
AdeI	CACNNNGTG	2 cut(s)	390, 778
AfaI	GTAC	4 cut(s)	122, 287, 809, 1052
AfiI	CCNNNNNNNGG	6 cut(s)	138, 273, 508, 571, 582, 593
AflIII	ACRYGT	1 cut(s)	282
AgsI	TTSAA	4 cut(s)	641, 679, 1066, 1114
AhlI	ACTAGT	1 cut(s)	1148
AjiI	CACGTC	2 cut(s)	201, 448
AjnI	CCWGG	2 cut(s)	183, 558
Alw21I	GWGCWC	1 cut(s)	471
Alw26I	GTCTC	1 cut(s)	607
AlwI	GGATC	1 cut(s)	574
Ama87I	CYCGRG	1 cut(s)	1054
AoxI	GGCC	9 cut(s)	108, 129, 169, 173, 195, 573, 584, 785, 821
ApeKI	GCWGC	5 cut(s)	701, 976, 1009, 1273, 1285
ApoI	RAATTY	2 cut(s)	663, 1060
AseI	ATTAAT	1 cut(s)	1344
Asp718I	GGTACC	1 cut(s)	1050
AspLEI	GCGC	7 cut(s)	86, 326, 328, 350, 383, 444, 1210
AspS9I	GGNCC	6 cut(s)	211, 276, 562, 573, 585, 785
AsuC2I	CCSGG	4 cut(s)	274, 572, 1055, 1056
AsuHPI	GGTGA	7 cut(s)	241, 364, 445, 514, 547, 1303, 1342
AsuII	TTCGAA	1 cut(s)	8
AvaI	CYCGRG	1 cut(s)	1054
AvaII	GGWCC	3 cut(s)	211, 276, 562
AxyI	CCTNAGG	1 cut(s)	789
BaeGI	GKGCMC	1 cut(s)	774
BanI	GGYRCC	2 cut(s)	380, 1050
BanII	GRGCYC	1 cut(s)	552
BbsI	GAAGAC	1 cut(s)	361
Bbv12I	GWGCWC	1 cut(s)	471
BbvCI	CCTCAGC	1 cut(s)	1301
BbvI	GCAGC	5 cut(s)	688, 963, 1021, 1285, 1297
BccI	CCATC	5 cut(s)	131, 504, 907, 940, 1099
BceAI	ACGGC	7 cut(s)	95, 103, 274, 293, 304, 883, 1150
BciT130I	CCWGG	2 cut(s)	185, 560
BclI	TGATCA	1 cut(s)	955
BcnI	CCSGG	4 cut(s)	274, 572, 1055, 1056
BcoDI	GTCTC	1 cut(s)	607
BcuI	ACTAGT	1 cut(s)	1148
BfaI	CTAG	2 cut(s)	17, 1149
BfmI	CTRYAG	2 cut(s)	427, 977
BfoI	RGCGCY	2 cut(s)	384, 445
BfuAI	ACCTGC	1 cut(s)	1279
BglI	GCCNNNNNGGC	1 cut(s)	547
Bme1390I	CCNGG	6 cut(s)	185, 274, 560, 572, 1055, 1056
Bme18I	GGWCC	3 cut(s)	211, 276, 562
BmeT110I	CYCGRG	1 cut(s)	1054
BmgBI	CACGTC	2 cut(s)	201, 448
BmgT120I	GGNCC	6 cut(s)	211, 276, 562, 573, 585, 785
BmiI	GGNNCC	7 cut(s)	213, 278, 382, 840, 891, 1052, 1164
BmrFI	CCNGG	6 cut(s)	185, 274, 560, 572, 1055, 1056
BmsI	GCATC	2 cut(s)	688, 978
BpiI	GAAGAC	1 cut(s)	361
BplI	GAGNNNNNCTC	2 cut(s)	287, 319
BpmI	CTGGAG	1 cut(s)	485
Bpu10I	CCTNAGC	2 cut(s)	705, 1301
Bpu14I	TTCGAA	1 cut(s)	8
BpuMI	CCSGG	4 cut(s)	274, 572, 1055, 1056
BsaHI	GRCGYC	4 cut(s)	228, 381, 414, 896
BsaI	GGTCTC	1 cut(s)	607
BsaJI	CCNNGG	6 cut(s)	105, 357, 824, 1054, 1055, 1248
BsaWI	WCCGGW	2 cut(s)	532, 593
Bsc4I	CCNNNNNNNGG	6 cut(s)	138, 273, 508, 571, 582, 593
Bse118I	RCCGGY	2 cut(s)	171, 205
Bse1I	ACTGG	1 cut(s)	603
Bse21I	CCTNAGG	1 cut(s)	789
BseBI	CCWGG	2 cut(s)	185, 560
BseDI	CCNNGG	6 cut(s)	105, 357, 824, 1054, 1055, 1248
BseGI	GGATG	4 cut(s)	918, 993, 1021, 1201
BseLI	CCNNNNNNNGG	6 cut(s)	138, 273, 508, 571, 582, 593
BseMII	CTCAG	5 cut(s)	618, 719, 857, 983, 1292
BseNI	ACTGG	1 cut(s)	603
BsePI	GCGCGC	1 cut(s)	324
BseRI	GAGGAG	4 cut(s)	61, 140, 1265, 1268
BseSI	GKGCMC	1 cut(s)	774
BseX3I	CGGCCG	4 cut(s)	108, 169, 173, 821
BseXI	GCAGC	5 cut(s)	688, 963, 1021, 1285, 1297
BseYI	CCCAGC	1 cut(s)	291
BsgI	GTGCAG	2 cut(s)	1292, 1304
Bsh1236I	CGCG	6 cut(s)	84, 107, 324, 326, 350, 578
Bsh1285I	CGRYCG	4 cut(s)	111, 172, 176, 824
BshFI	GGCC	9 cut(s)	110, 131, 171, 175, 197, 575, 586, 787, 823
BshNI	GGYRCC	2 cut(s)	380, 1050
BsiEI	CGRYCG	4 cut(s)	111, 172, 176, 824
BsiHKAI	GWGCWC	1 cut(s)	471
BsiHKCI	CYCGRG	1 cut(s)	1054
BsiWI	CGTACG	1 cut(s)	120
BslFI	GGGAC	4 cut(s)	337, 446, 898, 931
BslI	CCNNNNNNNGG	6 cut(s)	138, 273, 508, 571, 582, 593
BsmAI	GTCTC	1 cut(s)	607
BsmFI	GGGAC	4 cut(s)	337, 446, 898, 931
BsnI	GGCC	9 cut(s)	110, 131, 171, 175, 197, 575, 586, 787, 823
Bso31I	GGTCTC	1 cut(s)	607
BsoBI	CYCGRG	1 cut(s)	1054
Bsp119I	TTCGAA	1 cut(s)	8
Bsp1286I	GDGCHC	3 cut(s)	471, 552, 774
Bsp1407I	TGTACA	1 cut(s)	807
Bsp143I	GATC	3 cut(s)	363, 579, 955
BspANI	GGCC	9 cut(s)	110, 131, 171, 175, 197, 575, 586, 787, 823
BspCNI	CTCAG	5 cut(s)	617, 718, 856, 984, 1293
BspFNI	CGCG	6 cut(s)	84, 107, 324, 326, 350, 578
BspLI	GGNNCC	7 cut(s)	213, 278, 382, 840, 891, 1052, 1164
BspMAI	CTGCAG	1 cut(s)	981
BspMI	ACCTGC	1 cut(s)	1279
BspPI	GGATC	1 cut(s)	574
BspT104I	TTCGAA	1 cut(s)	8
BspT107I	GGYRCC	2 cut(s)	380, 1050
BspTNI	GGTCTC	1 cut(s)	607
BsrBI	CCGCTC	2 cut(s)	178, 882
BsrFI	RCCGGY	2 cut(s)	171, 205
BsrGI	TGTACA	1 cut(s)	807
BsrI	ACTGG	1 cut(s)	603
BssAI	RCCGGY	2 cut(s)	171, 205
BssECI	CCNNGG	6 cut(s)	105, 357, 824, 1054, 1055, 1248
BssHII	GCGCGC	1 cut(s)	324
BssMI	GATC	3 cut(s)	363, 579, 955
BssNI	GRCGYC	4 cut(s)	228, 381, 414, 896
BssT1I	CCWWGG	1 cut(s)	357
Bst2UI	CCWGG	2 cut(s)	185, 560
Bst4CI	ACNGT	2 cut(s)	889, 1282
Bst6I	CTCTTC	1 cut(s)	956
BstACI	GRCGYC	4 cut(s)	228, 381, 414, 896
BstAUI	TGTACA	1 cut(s)	807
BstBI	TTCGAA	1 cut(s)	8
BstC8I	GCNNGC	7 cut(s)	173, 195, 322, 326, 925, 1100, 1144
BstDEI	CTNAG	6 cut(s)	604, 705, 789, 843, 992, 1301
BstDSI	CCRYGG	1 cut(s)	105
BstF5I	GGATG	4 cut(s)	918, 993, 1021, 1201
BstFNI	CGCG	6 cut(s)	84, 107, 324, 326, 350, 578
BstH2I	RGCGCY	2 cut(s)	384, 445
BstHHI	GCGC	7 cut(s)	86, 326, 328, 350, 383, 444, 1210
BstKTI	GATC	3 cut(s)	366, 582, 958
BstMAI	GTCTC	1 cut(s)	607
BstMBI	GATC	3 cut(s)	363, 579, 955
BstMCI	CGRYCG	4 cut(s)	111, 172, 176, 824
BstMWI	GCNNNNNNNGC	8 cut(s)	95, 104, 314, 323, 332, 547, 707, 1282
BstNI	CCWGG	2 cut(s)	185, 560
BstNSI	RCATGY	2 cut(s)	193, 286
BstSCI	CCNGG	6 cut(s)	183, 272, 558, 570, 1053, 1054
BstSFI	CTRYAG	2 cut(s)	427, 977
BstSLI	GKGCMC	1 cut(s)	774
BstUI	CGCG	6 cut(s)	84, 107, 324, 326, 350, 578
BstV1I	GCAGC	5 cut(s)	688, 963, 1021, 1285, 1297
BstV2I	GAAGAC	1 cut(s)	361
BstXI	CCANNNNNNTGG	1 cut(s)	223
BstZI	CGGCCG	4 cut(s)	108, 169, 173, 821
Bsu36I	CCTNAGG	1 cut(s)	789
BsuRI	GGCC	9 cut(s)	110, 131, 171, 175, 197, 575, 586, 787, 823
BtgI	CCRYGG	1 cut(s)	105
BtrI	CACGTC	2 cut(s)	201, 448
BtsCI	GGATG	4 cut(s)	918, 993, 1021, 1201
BtsI	GCAGTG	2 cut(s)	621, 1131
BtsIMutI	CAGTG	4 cut(s)	621, 1131, 1287, 1367
BveI	ACCTGC	1 cut(s)	1279
Cac8I	GCNNGC	7 cut(s)	173, 195, 322, 326, 925, 1100, 1144
CfoI	GCGC	7 cut(s)	86, 326, 328, 350, 383, 444, 1210
Cfr10I	RCCGGY	2 cut(s)	171, 205
Cfr13I	GGNCC	6 cut(s)	211, 276, 562, 573, 585, 785
Cfr42I	CCGCGG	1 cut(s)	108
Cfr9I	CCCGGG	1 cut(s)	1054
CseI	GACGC	5 cut(s)	236, 339, 403, 466, 904
Csp6I	GTAC	4 cut(s)	121, 286, 808, 1051
CviAII	CATG	7 cut(s)	50, 190, 232, 283, 418, 811, 1204
CviQI	GTAC	4 cut(s)	121, 286, 808, 1051
DdeI	CTNAG	6 cut(s)	604, 705, 789, 843, 992, 1301
DinI	GGCGCC	1 cut(s)	382
DpnI	GATC	3 cut(s)	365, 581, 957
DpnII	GATC	3 cut(s)	363, 579, 955
DraIII	CACNNNGTG	2 cut(s)	390, 778
DrdI	GACNNNNNNGTC	2 cut(s)	218, 308
DseDI	GACNNNNNNGTC	2 cut(s)	218, 308
EaeI	YGGCCR	4 cut(s)	108, 169, 173, 821
EagI	CGGCCG	4 cut(s)	108, 169, 173, 821
Eam1104I	CTCTTC	1 cut(s)	956
EarI	CTCTTC	1 cut(s)	956
EciI	GGCGGA	2 cut(s)	91, 295
EclXI	CGGCCG	4 cut(s)	108, 169, 173, 821
Eco130I	CCWWGG	1 cut(s)	357
Eco24I	GRGCYC	1 cut(s)	552
Eco31I	GGTCTC	1 cut(s)	607
Eco47I	GGWCC	3 cut(s)	211, 276, 562
Eco52I	CGGCCG	4 cut(s)	108, 169, 173, 821
Eco57I	CTGAAG	1 cut(s)	6
Eco81I	CCTNAGG	1 cut(s)	789
Eco88I	CYCGRG	1 cut(s)	1054
EcoRII	CCWGG	2 cut(s)	183, 558
EcoT14I	CCWWGG	1 cut(s)	357
EcoT38I	GRGCYC	1 cut(s)	552
EgeI	GGCGCC	1 cut(s)	382
EheI	GGCGCC	1 cut(s)	382
ErhI	CCWWGG	1 cut(s)	357
FaeI	CATG	7 cut(s)	53, 193, 235, 286, 421, 814, 1207
FaqI	GGGAC	4 cut(s)	337, 446, 898, 931
FatI	CATG	7 cut(s)	49, 189, 231, 282, 417, 810, 1203
FauI	CCCGC	3 cut(s)	260, 329, 875
FbaI	TGATCA	1 cut(s)	955
FokI	GGATG	4 cut(s)	925, 1000, 1028, 1208
FriOI	GRGCYC	1 cut(s)	552
FseI	GGCCGGCC	1 cut(s)	175
FspBI	CTAG	2 cut(s)	17, 1149
GlaI	GCGC	7 cut(s)	85, 325, 327, 349, 382, 443, 1209
GsaI	CCCAGC	1 cut(s)	295
GsuI	CTGGAG	1 cut(s)	485
HaeII	RGCGCY	2 cut(s)	384, 445
HaeIII	GGCC	9 cut(s)	110, 131, 171, 175, 197, 575, 586, 787, 823
HgaI	GACGC	5 cut(s)	236, 339, 403, 466, 904
HhaI	GCGC	7 cut(s)	86, 326, 328, 350, 383, 444, 1210
Hin1I	GRCGYC	4 cut(s)	228, 381, 414, 896
Hin1II	CATG	7 cut(s)	53, 193, 235, 286, 421, 814, 1207
Hin6I	GCGC	7 cut(s)	84, 324, 326, 348, 381, 442, 1208
HinP1I	GCGC	7 cut(s)	84, 324, 326, 348, 381, 442, 1208
HindIII	AAGCTT	1 cut(s)	11
HinfI	GANTC	9 cut(s)	219, 296, 302, 485, 637, 682, 721, 829, 1312
HphI	GGTGA	7 cut(s)	241, 364, 445, 514, 547, 1303, 1342
Hpy166II	GTNNAC	4 cut(s)	211, 226, 619, 1242
Hpy188I	TCNGA	6 cut(s)	301, 659, 726, 846, 894, 960
Hpy188III	TCNNGA	2 cut(s)	679, 1042
Hpy8I	GTNNAC	4 cut(s)	211, 226, 619, 1242
Hpy99I	CGWCG	6 cut(s)	116, 205, 314, 548, 898, 1171
HpyAV	CCTTC	8 cut(s)	85, 145, 539, 934, 1041, 1108, 1327, 1331
HpyCH4III	ACNGT	2 cut(s)	889, 1282
HpyCH4IV	ACGT	2 cut(s)	200, 447
HpyCH4V	TGCA	8 cut(s)	193, 393, 421, 669, 979, 1146, 1273, 1285
HpyF10VI	GCNNNNNNNGC	8 cut(s)	95, 104, 314, 323, 332, 547, 707, 1282
HpyF3I	CTNAG	6 cut(s)	604, 705, 789, 843, 992, 1301
HpySE526I	ACGT	2 cut(s)	200, 447
Hsp92I	GRCGYC	4 cut(s)	228, 381, 414, 896
Hsp92II	CATG	7 cut(s)	53, 193, 235, 286, 421, 814, 1207
HspAI	GCGC	7 cut(s)	84, 324, 326, 348, 381, 442, 1208
KasI	GGCGCC	1 cut(s)	380
KpnI	GGTACC	1 cut(s)	1054
KroI	GCCGGC	1 cut(s)	171
KroNI	GCCGGC	1 cut(s)	173
Ksp22I	TGATCA	1 cut(s)	955
KspI	CCGCGG	1 cut(s)	108
Kzo9I	GATC	3 cut(s)	363, 579, 955
LmnI	GCTCC	7 cut(s)	240, 466, 573, 838, 879, 1006, 1162
Lsp1109I	GCAGC	5 cut(s)	688, 963, 1021, 1285, 1297
LweI	GCATC	2 cut(s)	688, 978
MaeI	CTAG	2 cut(s)	17, 1149
MaeII	ACGT	2 cut(s)	200, 447
MaeIII	GTNAC	1 cut(s)	1365
MalI	GATC	3 cut(s)	365, 581, 957
MbiI	CCGCTC	2 cut(s)	178, 882
MboI	GATC	3 cut(s)	363, 579, 955
MboII	GAAGA	7 cut(s)	70, 361, 662, 730, 949, 973, 1306
MhlI	GDGCHC	3 cut(s)	471, 552, 774
MluCI	AATT	2 cut(s)	663, 1060
Mly113I	GGCGCC	1 cut(s)	381
MlyI	GAGTC	5 cut(s)	228, 296, 305, 479, 1321
MmeI	TCCRAC	2 cut(s)	324, 917
MroNI	GCCGGC	1 cut(s)	171
MseI	TTAA	3 cut(s)	341, 1344, 1350
MslI	CAYNNNNRTG	1 cut(s)	696
MspA1I	CMGCKG	3 cut(s)	107, 976, 1012
MspR9I	CCNGG	6 cut(s)	185, 274, 560, 572, 1055, 1056
MvaI	CCWGG	2 cut(s)	185, 560
MvnI	CGCG	6 cut(s)	84, 107, 324, 326, 350, 578
MwoI	GCNNNNNNNGC	8 cut(s)	95, 104, 314, 323, 332, 547, 707, 1282
NaeI	GCCGGC	1 cut(s)	173
NarI	GGCGCC	1 cut(s)	381
NciI	CCSGG	4 cut(s)	274, 572, 1055, 1056
NdeII	GATC	3 cut(s)	363, 579, 955
NgoMIV	GCCGGC	1 cut(s)	171
NlaIII	CATG	7 cut(s)	53, 193, 235, 286, 421, 814, 1207
NlaIV	GGNNCC	7 cut(s)	213, 278, 382, 840, 891, 1052, 1164
NmeAIII	GCCGAG	1 cut(s)	849
NmuCI	GTSAC	1 cut(s)	1365
NspI	RCATGY	2 cut(s)	193, 286
NspV	TTCGAA	1 cut(s)	8
PaqCI	CACCTGC	1 cut(s)	1279
PauI	GCGCGC	1 cut(s)	324
PciI	ACATGT	1 cut(s)	282
PcsI	WCGNNNNNNNCGW	2 cut(s)	120, 552
PdiI	GCCGGC	1 cut(s)	173
PfeI	GAWTC	4 cut(s)	637, 682, 721, 829
Pfl23II	CGTACG	1 cut(s)	120
PfoI	TCCNGGA	1 cut(s)	272
PleI	GAGTC	5 cut(s)	227, 296, 304, 479, 1320
PluTI	GGCGCC	1 cut(s)	384
PpsI	GAGTC	5 cut(s)	227, 296, 304, 479, 1320
PscI	ACATGT	1 cut(s)	282
PshBI	ATTAAT	1 cut(s)	1344
Psp6I	CCWGG	2 cut(s)	183, 558
PspFI	CCCAGC	1 cut(s)	291
PspGI	CCWGG	2 cut(s)	183, 558
PspLI	CGTACG	1 cut(s)	120
PspN4I	GGNNCC	7 cut(s)	213, 278, 382, 840, 891, 1052, 1164
PspPI	GGNCC	6 cut(s)	211, 276, 562, 573, 585, 785
PstI	CTGCAG	1 cut(s)	981
PteI	GCGCGC	1 cut(s)	324
PvuII	CAGCTG	2 cut(s)	976, 1012
RigI	GGCCGGCC	1 cut(s)	175
RsaI	GTAC	4 cut(s)	122, 287, 809, 1052
RsaNI	GTAC	4 cut(s)	121, 286, 808, 1051
RseI	CAYNNNNRTG	1 cut(s)	696
SacII	CCGCGG	1 cut(s)	108
SaqAI	TTAA	3 cut(s)	341, 1344, 1350
Sau3AI	GATC	3 cut(s)	363, 579, 955
Sau96I	GGNCC	6 cut(s)	211, 276, 562, 573, 585, 785
SchI	GAGTC	5 cut(s)	228, 296, 305, 479, 1321
ScrFI	CCNGG	6 cut(s)	185, 274, 560, 572, 1055, 1056
SduI	GDGCHC	3 cut(s)	471, 552, 774
SfaNI	GCATC	2 cut(s)	688, 978
SfcI	CTRYAG	2 cut(s)	427, 977
SfoI	GGCGCC	1 cut(s)	382
Sfr303I	CCGCGG	1 cut(s)	108
SfuI	TTCGAA	1 cut(s)	8
SgrAI	CRCCGGYG	1 cut(s)	205
SgrBI	CCGCGG	1 cut(s)	108
SinI	GGWCC	3 cut(s)	211, 276, 562
SmaI	CCCGGG	1 cut(s)	1056
SmiMI	CAYNNNNRTG	1 cut(s)	696
SpeI	ACTAGT	1 cut(s)	1148
Sse9I	AATT	2 cut(s)	663, 1060
SspDI	GGCGCC	1 cut(s)	380
SspI	AATATT	1 cut(s)	1348
SspMI	CTAG	2 cut(s)	17, 1149
StyD4I	CCNGG	6 cut(s)	183, 272, 558, 570, 1053, 1054
StyI	CCWWGG	1 cut(s)	357
TaaI	ACNGT	2 cut(s)	889, 1282
TaiI	ACGT	2 cut(s)	203, 450
TaqI	TCGA	9 cut(s)	8, 114, 312, 483, 516, 555, 1041, 1130, 1217
TasI	AATT	2 cut(s)	663, 1060
TatI	WGTACW	1 cut(s)	807
TfiI	GAWTC	4 cut(s)	637, 682, 721, 829
Tru1I	TTAA	3 cut(s)	341, 1344, 1350
Tru9I	TTAA	3 cut(s)	341, 1344, 1350
TscAI	CASTG	4 cut(s)	621, 1131, 1287, 1367
TseFI	GTSAC	1 cut(s)	1365
TseI	GCWGC	5 cut(s)	701, 976, 1009, 1273, 1285
Tsp45I	GTSAC	1 cut(s)	1365
TspDTI	ATGAA	5 cut(s)	164, 639, 680, 863, 1338
TspGWI	ACGGA	4 cut(s)	394, 479, 675, 867
TspMI	CCCGGG	1 cut(s)	1054
TspRI	CASTG	4 cut(s)	621, 1131, 1287, 1367
VpaK11BI	GGWCC	3 cut(s)	211, 276, 562
VspI	ATTAAT	1 cut(s)	1344
XapI	RAATTY	2 cut(s)	663, 1060
XceI	RCATGY	2 cut(s)	193, 286
XcmI	CCANNNNNNNNNTGG	1 cut(s)	205
XmaI	CCCGGG	1 cut(s)	1054
XspI	CTAG	2 cut(s)	17, 1149

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.