Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0004138

Physical Location & Seq

Genomic Coordinates Forward (+)

18292675 .. 18297970

Gene Structure 5296 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00298430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2235 bp

ATGGCGCTGTTTCTCGGGTTGCTGAGGAGGACGCACTTGCTCTCGCACCAAACGCTTTCGGCTTCCGGGTGGCTTGGTTCGGTTCAGCCGCTTTGCCGGGTAGATCTGCAGCGGCCAGGAGCATTTCTTGTAAACACGGGTAGCAGTCAGCTGTTGGATGATTGTTTTGTGAAACAGCTTTTGATTTATGGAACTTTAGCTGGGTGTGCTTTGGATAGTGCTGAAGGGCCGCAATGGATGGAAGCATGTGCAGATTATAGCGAAGAAGTATGGCTGGAGATAAGGGAGAAAGCAATATCCGTATTGCAGACATTCTTCTTTGATGGGGTTGTTCCAAAAAATGTTGTATCTGATGAGGATGAGGAGGAAAGTGAAATAGGTGATGAAAATGAACCCTCTGATAAACTGGAGCAAGAAAATCCCTTACAGCTAACCCTTGTTCAGCAATTAACTGATGTTAGTCATGCAAGTCCAGAAAGCTCCCTGAATAAAGAAACCAATCAATCCAAGTCTCCTAGCCAGCAAGATGAACCTTCACTAGCAAAAGAAAGTACCTTGCAGCGGGAGGAAGATACGACTATGAGTGGCACAGATCAAGCGTTTAGTTCCAGTTCTCGGTTTGCTTCCCCTGAAGACTCAAGAAGTAGGAAAACACCTATAGATTCAATGCAAGAGTCACCTTCCGACCAGCTGCTAAAATCCAGAAAGAGGCTGAGTGGAAAGCCTGGTGAACTGTTAAAGGATGGCTATGTTGTAGCTCTATATGCAAGAGATATCCCCGGTCTTCATGTCGCAAGGCAAAGAGTTAAAGGTGGTGGTTGGTTCCTAGATACCATGTCAAATGTAATAAAAAGAGATCCTGCAGCTCAGTTCCTCATTGTAATCAGAAGCAAGATAAATAGAAGAATGGAATTTGTATTTGCAACTCACAGTTTGGTAGCCATGAATCCAAATCCATACCAACCTATGGCACCTCCACCTCCATGGCCTCGAATGTTGCCGCCTAACCCTCCAATGATGCCTCCCAACGCTCCTATGGTGCCCCCCAACCCTCCGGTCACGAGCACTTTCTGGGAGACCGCAAATGTGCGTGATCAGCTGAAGAATTTGCAGGACACTCTTGGTCTTGCAAAAGCAATGCAGAAAGAGCTTGAGATGCTGATGTTGATCAGAGATGGTAAGTGGTCTGATGATGCTTCTGTCGGCGGGTTTTCTGAGTTTTTGAAAGATAGGAAGATTGATTTGGAGGCCCAAGTGTTGCAATCAGTGGAAGCTGCAAACTCTTTAATGGCTAAACTACTAGTTGAGCTTGAACCGTTTAGAGTGATCACGCACGAAATGTGTCCCTGGGAGGAAAAATCTGCGGCTATCCAATTATCCAATAAGATATGCAAGTCCAAGAGGAATAAACGGTGGAGGAAAAGAAAGAGGAAGCGCATTGCGGAGATGATTGCAAAGGAACGTGAAGCGTTAGATGAAGCTGATGAATGGAGAGCTAGGGAAATTGCAAAGGATATTGCCAAATGCAAGATGGAAGACATGAAGAAAATTGCAAGCCTTAAAGCAAAGGAAGAGAGAAAGAGACTAGAATCCGAGCTTGAGACAGTATTGATTGTTGAGAAATTGCAAGAGTTGCGCTCCATCAGGATTGAAAAAATGAAGAAACAAGGCCATTTTCTCCCAGAAGAGGATGATAAATTTCTTGAAAGAGTACGAGCTGCAGTTGAGGAGGAGGAGCATCAAGCAATCTTGGCAGCTGACATGGATGCTGCTAGGGATGCCATTGCAACTGCTGAGCAATCGAGGAAAACAACCGAGAATTTCAGACCTGATTCTATTAATCAAAGCAGTGCTAAAGGCGAGAGTAAGGAAAGTAAAGGCCCGACAATTCCAAGCACTAATGAAGGCAACTCTACTGCAGTCACTAACAAGGAATCTGGAAAACAAGTTCTACAGGGAGAGGGTTACAGTGGAGCTTATGATGCTGTGGCAAATTTACCTCTGGAATTTTATCACTATTATCATGGCAGCAATACTGATATGGGCACCCTTATTGAGGTGAGAAGAACATGGGATGCCTATATGAGACCAGGAGGAAGCCGGATACATATTAGGGCAAAAGGCTTCCCAGAGGCTTTTCCTGTTGTTGTTATGATCCGGATACCAGGACACTGGGTGCAACCTCCACCTCCTGCAGATGATATCTGGGCCTCCTACCTTCTGCAACCTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005689 GO:0008150 GO:0009719 GO:0009725 GO:0009966 GO:0009967 GO:0010033 GO:0010646 GO:0010647 GO:0010941 GO:0010942 GO:0014070 GO:0023051 GO:0023056 GO:0031960 GO:0032991 GO:0033993 GO:0042221 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048518 GO:0048522 GO:0048545 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051384 GO:0065007 GO:0070228 GO:0070230 GO:0070232 GO:0070234 GO:1990904 GO:2000106 GO:2000108 GO:2001233 GO:2001235

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PDCD7

Protein Analysis

744

Amino Acids

83.77

Weight (kDa)

5.72

Isoelectric Point (pI)

59.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004138)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46200 AT2G46200 AT2G46200 AT2G46200
fragaria_vesca	FvH4_7g15540 FvH4_7g15540
malus_domestica	MD07G1130200.v1.1
prunus_persica	Prupe.2G179100_v2.0.a1 Prupe.2G179100_v2.0.a1
pyrus_communis	pycom07g12710
rosa_chinensis	RchiOBHm_Chr1g0357891 RchiOBHm_Chr1g0358051 RchiOBHm_Chr1g0358091 RchiOBHm_Chr1g0358181
rosa_laevigata	RLG00000027984 RLG00000027987
rosa_multiflora	Rmu_sc0002071.1_g000008 Rmu_sc0007849.1_g000015
rosa_roxburghii	Rroxscaffold_4G00298380 Rroxscaffold_4G00298430
rosa_rugosa	Rorug01G0259300 Rorug01G0259400 Rorug01G0259500 Rorug01G0259600 Rorug01G0259700
rosa_samantha	Rh1AG273200 Rh1AG273400 Rh1BG240600 Rh1CG257000 Rh1DG268900 Rh1DG269500
rosa_wichuraiana	Rw1G024400 Rw1G024440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	970, 1039, 2045
AccB7I	CCANNNNNTGG	1 cut(s)	967
AccIII	TCCGGA	1 cut(s)	2157
AciI	CCGC	9 cut(s)	89, 112, 230, 562, 1001, 1080, 1206, 1364, 1442
AclWI	GGATC	2 cut(s)	851, 2149
AcoI	YGGCCR	1 cut(s)	113
AcsI	RAATTY	6 cut(s)	911, 1105, 1697, 1819, 1993, 2006
AcuI	CTGAAG	3 cut(s)	243, 651, 1121
AdeI	CACNNNGTG	1 cut(s)	2176
AfaI	GTAC	2 cut(s)	553, 1713
AfiI	CCNNNNNNNGG	6 cut(s)	561, 615, 708, 967, 1687, 2056
AgsI	TTSAA	5 cut(s)	666, 1225, 1313, 1652, 1706
AhlI	ACTAGT	1 cut(s)	1300
AjnI	CCWGG	5 cut(s)	115, 724, 1346, 2089, 2164
AjuI	GAANNNNNNNTTGG	2 cut(s)	1226, 1258
AloI	GAACNNNNNNTCC	2 cut(s)	1932, 1964
Alw21I	GWGCWC	1 cut(s)	1067
Alw26I	GTCTC	5 cut(s)	516, 1070, 1576, 1595, 2080
AlwI	GGATC	2 cut(s)	851, 2149
Ama87I	CYCGRG	1 cut(s)	14
Aor13HI	TCCGGA	1 cut(s)	2157
AoxI	GGCC	7 cut(s)	113, 227, 986, 1248, 1669, 1879, 2208
ApeKI	GCWGC	9 cut(s)	109, 559, 691, 863, 1274, 1718, 1754, 1769, 2028
ApoI	RAATTY	6 cut(s)	911, 1105, 1697, 1819, 1993, 2006
AseI	ATTAAT	1 cut(s)	1839
AspLEI	GCGC	3 cut(s)	7, 1437, 1638
AspS9I	GGNCC	4 cut(s)	227, 1249, 1880, 2208
AsuC2I	CCSGG	3 cut(s)	67, 98, 780
AsuHPI	GGTGA	4 cut(s)	392, 669, 740, 2071
AvaI	CYCGRG	1 cut(s)	14
BaeGI	GKGCMC	2 cut(s)	1044, 2048
BanI	GGYRCC	3 cut(s)	970, 1039, 2045
BauI	CACGAG	1 cut(s)	1060
BbsI	GAAGAC	3 cut(s)	639, 776, 1542
Bbv12I	GWGCWC	1 cut(s)	1067
BbvCI	CCTCAGC	1 cut(s)	23
BbvI	GCAGC	9 cut(s)	121, 571, 678, 875, 1261, 1705, 1756, 1766, 2040
BccI	CCATC	6 cut(s)	232, 317, 737, 1169, 1525, 1649
BciT130I	CCWGG	5 cut(s)	117, 726, 1348, 2091, 2166
BciVI	GTATCC	2 cut(s)	2097, 2154
BclI	TGATCA	3 cut(s)	1093, 1167, 1326
BcnI	CCSGG	3 cut(s)	67, 98, 780
BcoDI	GTCTC	5 cut(s)	516, 1070, 1576, 1595, 2080
BcuI	ACTAGT	1 cut(s)	1300
BfaI	CTAG	7 cut(s)	516, 539, 827, 1301, 1497, 1586, 1773
BfmI	CTRYAG	7 cut(s)	107, 657, 861, 1719, 1917, 1952, 2193
BfoI	RGCGCY	1 cut(s)	8
BfuI	GTATCC	2 cut(s)	2097, 2154
BglII	AGATCT	1 cut(s)	103
BlpI	GCTNAGC	1 cut(s)	1794
Bme1390I	CCNGG	8 cut(s)	67, 98, 117, 726, 780, 1348, 2091, 2166
BmeT110I	CYCGRG	1 cut(s)	14
BmgT120I	GGNCC	4 cut(s)	227, 1249, 1880, 2208
BmiI	GGNNCC	4 cut(s)	824, 972, 1041, 2047
BmrFI	CCNGG	8 cut(s)	67, 98, 117, 726, 780, 1348, 2091, 2166
BmrI	ACTGGG	1 cut(s)	2182
BmsI	GCATC	8 cut(s)	1008, 1146, 1183, 1747, 1756, 1768, 1972, 2065
BmuI	ACTGGG	1 cut(s)	2182
BpiI	GAAGAC	3 cut(s)	639, 776, 1542
BplI	GAGNNNNNCTC	2 cut(s)	1622, 1654
BpmI	CTGGAG	2 cut(s)	296, 428
Bpu10I	CCTNAGC	1 cut(s)	23
Bpu1102I	GCTNAGC	1 cut(s)	1794
BpuEI	CTTGAG	3 cut(s)	622, 1172, 1619
BpuMI	CCSGG	3 cut(s)	67, 98, 780
BsaBI	GATNNNNATC	1 cut(s)	1166
BsaI	GGTCTC	2 cut(s)	1070, 2080
BsaJI	CCNNGG	4 cut(s)	778, 983, 1346, 1347
BsaWI	WCCGGW	2 cut(s)	1054, 2157
Bsc4I	CCNNNNNNNGG	6 cut(s)	561, 615, 708, 967, 1687, 2056
Bse1I	ACTGG	3 cut(s)	411, 609, 2177
Bse3DI	GCAATG	4 cut(s)	239, 1143, 1437, 1782
Bse8I	GATNNNNATC	1 cut(s)	1166
BseAI	TCCGGA	1 cut(s)	2157
BseBI	CCWGG	5 cut(s)	117, 726, 1348, 2091, 2166
BseDI	CCNNGG	4 cut(s)	778, 983, 1346, 1347
BseGI	GGATG	8 cut(s)	163, 243, 364, 748, 1696, 1771, 1783, 2080
BseJI	GATNNNNATC	1 cut(s)	1166
BseLI	CCNNNNNNNGG	6 cut(s)	561, 615, 708, 967, 1687, 2056
BseMI	GCAATG	4 cut(s)	239, 1143, 1437, 1782
BseMII	CTCAG	5 cut(s)	14, 704, 881, 1206, 1785
BseNI	ACTGG	3 cut(s)	411, 609, 2177
BseRI	GAGGAG	5 cut(s)	40, 377, 1742, 1745, 1748
BseSI	GKGCMC	2 cut(s)	1044, 2048
BseXI	GCAGC	9 cut(s)	121, 571, 678, 875, 1261, 1705, 1756, 1766, 2040
BseYI	CCCAGC	1 cut(s)	200
BsgI	GTGCAG	1 cut(s)	270
BshFI	GGCC	7 cut(s)	115, 229, 988, 1250, 1671, 1881, 2210
BshNI	GGYRCC	3 cut(s)	970, 1039, 2045
BsiHKAI	GWGCWC	1 cut(s)	1067
BsiHKCI	CYCGRG	1 cut(s)	14
BsiSI	CCGG	6 cut(s)	66, 97, 780, 1055, 2101, 2158
BslFI	GGGAC	1 cut(s)	1329
BslI	CCNNNNNNNGG	6 cut(s)	561, 615, 708, 967, 1687, 2056
BsmAI	GTCTC	5 cut(s)	516, 1070, 1576, 1595, 2080
BsmFI	GGGAC	1 cut(s)	1329
BsnI	GGCC	7 cut(s)	115, 229, 988, 1250, 1671, 1881, 2210
Bso31I	GGTCTC	2 cut(s)	1070, 2080
BsoBI	CYCGRG	1 cut(s)	14
Bsp1286I	GDGCHC	3 cut(s)	1044, 1067, 2048
Bsp13I	TCCGGA	1 cut(s)	2157
Bsp143I	GATC	7 cut(s)	103, 592, 856, 1093, 1167, 1326, 2154
Bsp1720I	GCTNAGC	1 cut(s)	1794
Bsp19I	CCATGG	1 cut(s)	983
BspACI	CCGC	9 cut(s)	89, 112, 230, 562, 1001, 1080, 1206, 1364, 1442
BspANI	GGCC	7 cut(s)	115, 229, 988, 1250, 1671, 1881, 2210
BspCNI	CTCAG	5 cut(s)	15, 705, 880, 1207, 1786
BspEI	TCCGGA	1 cut(s)	2157
BspLI	GGNNCC	4 cut(s)	824, 972, 1041, 2047
BspMAI	CTGCAG	5 cut(s)	111, 865, 1723, 1921, 2197
BspPI	GGATC	2 cut(s)	851, 2149
BspT107I	GGYRCC	3 cut(s)	970, 1039, 2045
BspTNI	GGTCTC	2 cut(s)	1070, 2080
BsrDI	GCAATG	4 cut(s)	239, 1143, 1437, 1782
BsrI	ACTGG	3 cut(s)	411, 609, 2177
BssECI	CCNNGG	4 cut(s)	778, 983, 1346, 1347
BssMI	GATC	7 cut(s)	103, 592, 856, 1093, 1167, 1326, 2154
BssSI	CACGAG	1 cut(s)	1060
BssT1I	CCWWGG	1 cut(s)	983
Bst2BI	CACGAG	1 cut(s)	1060
Bst2UI	CCWGG	5 cut(s)	117, 726, 1348, 2091, 2166
Bst4CI	ACNGT	6 cut(s)	735, 932, 1317, 1413, 1606, 1970
Bst6I	CTCTTC	2 cut(s)	1566, 1680
BstAPI	GCANNNNNTGC	1 cut(s)	1633
BstC8I	GCNNGC	2 cut(s)	521, 1555
BstDEI	CTNAG	5 cut(s)	23, 713, 867, 1215, 1794
BstDSI	CCRYGG	1 cut(s)	983
BstENI	CCTNNNNNAGG	1 cut(s)	2054
BstF5I	GGATG	8 cut(s)	163, 243, 364, 748, 1696, 1771, 1783, 2080
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	3 cut(s)	7, 1437, 1638
BstKTI	GATC	7 cut(s)	106, 595, 859, 1096, 1170, 1329, 2157
BstMAI	GTCTC	5 cut(s)	516, 1070, 1576, 1595, 2080
BstMBI	GATC	7 cut(s)	103, 592, 856, 1093, 1167, 1326, 2154
BstNI	CCWGG	5 cut(s)	117, 726, 1348, 2091, 2166
BstNSI	RCATGY	1 cut(s)	249
BstSCI	CCNGG	8 cut(s)	65, 96, 115, 724, 778, 1346, 2089, 2164
BstSFI	CTRYAG	7 cut(s)	107, 657, 861, 1719, 1917, 1952, 2193
BstSLI	GKGCMC	2 cut(s)	1044, 2048
BstV1I	GCAGC	9 cut(s)	121, 571, 678, 875, 1261, 1705, 1756, 1766, 2040
BstV2I	GAAGAC	3 cut(s)	639, 776, 1542
BstX2I	RGATCY	2 cut(s)	103, 856
BstXI	CCANNNNNNTGG	2 cut(s)	984, 2172
BstYI	RGATCY	2 cut(s)	103, 856
BsuI	GTATCC	2 cut(s)	2097, 2154
BsuRI	GGCC	7 cut(s)	115, 229, 988, 1250, 1671, 1881, 2210
BtgI	CCRYGG	1 cut(s)	983
BtsCI	GGATG	8 cut(s)	163, 243, 364, 748, 1696, 1771, 1783, 2080
BtsI	GCAGTG	1 cut(s)	1855
BtsIMutI	CAGTG	4 cut(s)	1272, 1855, 1975, 2170
Cac8I	GCNNGC	2 cut(s)	521, 1555
CfoI	GCGC	3 cut(s)	7, 1437, 1638
Cfr13I	GGNCC	4 cut(s)	227, 1249, 1880, 2208
CseI	GACGC	1 cut(s)	40
Csp6I	GTAC	2 cut(s)	552, 1712
CviQI	GTAC	2 cut(s)	552, 1712
DdeI	CTNAG	5 cut(s)	23, 713, 867, 1215, 1794
DpnI	GATC	7 cut(s)	105, 594, 858, 1095, 1169, 1328, 2156
DpnII	GATC	7 cut(s)	103, 592, 856, 1093, 1167, 1326, 2154
DraIII	CACNNNGTG	1 cut(s)	2176
EaeI	YGGCCR	1 cut(s)	113
Eam1104I	CTCTTC	2 cut(s)	1566, 1680
EarI	CTCTTC	2 cut(s)	1566, 1680
Eco130I	CCWWGG	1 cut(s)	983
Eco31I	GGTCTC	2 cut(s)	1070, 2080
Eco32I	GATATC	2 cut(s)	775, 2203
Eco57I	CTGAAG	3 cut(s)	243, 651, 1121
Eco88I	CYCGRG	1 cut(s)	14
EcoNI	CCTNNNNNAGG	1 cut(s)	2054
EcoRII	CCWGG	5 cut(s)	115, 724, 1346, 2089, 2164
EcoRV	GATATC	2 cut(s)	775, 2203
EcoT14I	CCWWGG	1 cut(s)	983
ErhI	CCWWGG	1 cut(s)	983
FaqI	GGGAC	1 cut(s)	1329
FauI	CCCGC	2 cut(s)	555, 1199
FbaI	TGATCA	3 cut(s)	1093, 1167, 1326
FokI	GGATG	8 cut(s)	170, 250, 371, 755, 1703, 1778, 1790, 2087
FspBI	CTAG	7 cut(s)	516, 539, 827, 1301, 1497, 1586, 1773
GlaI	GCGC	3 cut(s)	6, 1436, 1637
GsaI	CCCAGC	1 cut(s)	204
GsuI	CTGGAG	2 cut(s)	296, 428
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	7 cut(s)	115, 229, 988, 1250, 1671, 1881, 2210
HapII	CCGG	6 cut(s)	66, 97, 780, 1055, 2101, 2158
HgaI	GACGC	1 cut(s)	40
HhaI	GCGC	3 cut(s)	7, 1437, 1638
Hin6I	GCGC	3 cut(s)	5, 1435, 1636
HinP1I	GCGC	3 cut(s)	5, 1435, 1636
HinfI	GANTC	7 cut(s)	635, 662, 674, 946, 1589, 1832, 1934
HpaII	CCGG	6 cut(s)	66, 97, 780, 1055, 2101, 2158
HphI	GGTGA	4 cut(s)	392, 669, 740, 2071
Hpy166II	GTNNAC	2 cut(s)	133, 731
Hpy188I	TCNGA	9 cut(s)	352, 400, 685, 887, 1172, 1189, 1216, 1594, 1826
Hpy188III	TCNNGA	9 cut(s)	473, 639, 702, 1060, 1645, 1703, 1938, 2003, 2158
Hpy8I	GTNNAC	2 cut(s)	133, 731
HpyAV	CCTTC	5 cut(s)	218, 543, 690, 1898, 2228
HpyCH4III	ACNGT	6 cut(s)	735, 932, 1317, 1413, 1606, 1970
HpyCH4IV	ACGT	1 cut(s)	1462
HpyF3I	CTNAG	5 cut(s)	23, 713, 867, 1215, 1794
HpySE526I	ACGT	1 cut(s)	1462
HspAI	GCGC	3 cut(s)	5, 1435, 1636
Kpn2I	TCCGGA	1 cut(s)	2157
Ksp22I	TGATCA	3 cut(s)	1093, 1167, 1326
Kzo9I	GATC	7 cut(s)	103, 592, 856, 1093, 1167, 1326, 2154
LmnI	GCTCC	7 cut(s)	119, 409, 485, 1036, 1643, 1735, 1973
Lsp1109I	GCAGC	9 cut(s)	121, 571, 678, 875, 1261, 1705, 1756, 1766, 2040
LweI	GCATC	8 cut(s)	1008, 1146, 1183, 1747, 1756, 1768, 1972, 2065
MaeI	CTAG	7 cut(s)	516, 539, 827, 1301, 1497, 1586, 1773
MaeII	ACGT	1 cut(s)	1462
MaeIII	GTNAC	4 cut(s)	675, 1057, 1921, 1964
MalI	GATC	7 cut(s)	105, 594, 858, 1095, 1169, 1328, 2156
MboI	GATC	7 cut(s)	103, 592, 856, 1093, 1167, 1326, 2154
MflI	RGATCY	2 cut(s)	103, 856
MhlI	GDGCHC	3 cut(s)	1044, 1067, 2048
MlyI	GAGTC	2 cut(s)	629, 683
MmeI	TCCRAC	2 cut(s)	135, 708
MroI	TCCGGA	1 cut(s)	2157
MseI	TTAA	6 cut(s)	449, 737, 807, 1286, 1560, 1839
MslI	CAYNNNNRTG	1 cut(s)	982
MspA1I	CMGCKG	6 cut(s)	112, 151, 562, 691, 1099, 1757
MspI	CCGG	6 cut(s)	66, 97, 780, 1055, 2101, 2158
MspR9I	CCNGG	8 cut(s)	67, 98, 117, 726, 780, 1348, 2091, 2166
MvaI	CCWGG	5 cut(s)	117, 726, 1348, 2091, 2166
NciI	CCSGG	3 cut(s)	67, 98, 780
NcoI	CCATGG	1 cut(s)	983
NdeII	GATC	7 cut(s)	103, 592, 856, 1093, 1167, 1326, 2154
NlaIV	GGNNCC	4 cut(s)	824, 972, 1041, 2047
NmuCI	GTSAC	3 cut(s)	675, 1057, 1921
NspI	RCATGY	1 cut(s)	249
PasI	CCCWGGG	1 cut(s)	1347
PfeI	GAWTC	5 cut(s)	662, 946, 1589, 1832, 1934
PflMI	CCANNNNNTGG	1 cut(s)	967
PleI	GAGTC	2 cut(s)	629, 682
PpsI	GAGTC	2 cut(s)	629, 682
PshBI	ATTAAT	1 cut(s)	1839
Psp6I	CCWGG	5 cut(s)	115, 724, 1346, 2089, 2164
PspFI	CCCAGC	1 cut(s)	200
PspGI	CCWGG	5 cut(s)	115, 724, 1346, 2089, 2164
PspN4I	GGNNCC	4 cut(s)	824, 972, 1041, 2047
PspPI	GGNCC	4 cut(s)	227, 1249, 1880, 2208
PstI	CTGCAG	5 cut(s)	111, 865, 1723, 1921, 2197
PsuI	RGATCY	2 cut(s)	103, 856
PvuII	CAGCTG	4 cut(s)	151, 691, 1099, 1757
RsaI	GTAC	2 cut(s)	553, 1713
RsaNI	GTAC	2 cut(s)	552, 1712
RseI	CAYNNNNRTG	1 cut(s)	982
SaqAI	TTAA	6 cut(s)	449, 737, 807, 1286, 1560, 1839
Sau3AI	GATC	7 cut(s)	103, 592, 856, 1093, 1167, 1326, 2154
Sau96I	GGNCC	4 cut(s)	227, 1249, 1880, 2208
SchI	GAGTC	2 cut(s)	629, 683
ScrFI	CCNGG	8 cut(s)	67, 98, 117, 726, 780, 1348, 2091, 2166
SduI	GDGCHC	3 cut(s)	1044, 1067, 2048
SfaNI	GCATC	8 cut(s)	1008, 1146, 1183, 1747, 1756, 1768, 1972, 2065
SfcI	CTRYAG	7 cut(s)	107, 657, 861, 1719, 1917, 1952, 2193
SmiMI	CAYNNNNRTG	1 cut(s)	982
SmlI	CTYRAG	3 cut(s)	637, 1151, 1598
SmoI	CTYRAG	3 cut(s)	637, 1151, 1598
SpeI	ACTAGT	1 cut(s)	1300
SsiI	CCGC	9 cut(s)	89, 112, 230, 562, 1001, 1080, 1206, 1364, 1442
SspMI	CTAG	7 cut(s)	516, 539, 827, 1301, 1497, 1586, 1773
StyD4I	CCNGG	8 cut(s)	65, 96, 115, 724, 778, 1346, 2089, 2164
StyI	CCWWGG	1 cut(s)	983
TaaI	ACNGT	6 cut(s)	735, 932, 1317, 1413, 1606, 1970
TaiI	ACGT	1 cut(s)	1465
TaqI	TCGA	2 cut(s)	991, 1802
TauI	GCSGC	5 cut(s)	91, 115, 232, 1003, 1367
TfiI	GAWTC	5 cut(s)	662, 946, 1589, 1832, 1934
Tru1I	TTAA	6 cut(s)	449, 737, 807, 1286, 1560, 1839
Tru9I	TTAA	6 cut(s)	449, 737, 807, 1286, 1560, 1839
TscAI	CASTG	4 cut(s)	1272, 1855, 1975, 2177
TseFI	GTSAC	3 cut(s)	675, 1057, 1921
TseI	GCWGC	9 cut(s)	109, 559, 691, 863, 1274, 1718, 1754, 1769, 2028
Tsp45I	GTSAC	3 cut(s)	675, 1057, 1921
TspGWI	ACGGA	1 cut(s)	289
TspRI	CASTG	4 cut(s)	1272, 1855, 1975, 2177
Van91I	CCANNNNNTGG	1 cut(s)	967
VspI	ATTAAT	1 cut(s)	1839
XagI	CCTNNNNNAGG	1 cut(s)	2054
XapI	RAATTY	6 cut(s)	911, 1105, 1697, 1819, 1993, 2006
XceI	RCATGY	1 cut(s)	249
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1033, 1528
XspI	CTAG	7 cut(s)	516, 539, 827, 1301, 1497, 1586, 1773

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.