mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0343391 RchiOBHm_Chr2g0162991 RchiOBHm_Chr4g0397821 RchiOBHm_Chr7g0183001 RchiOBHm_Chr7g0186671 |
| rosa_laevigata | RLG00000010466 RLG00000034508 |
| rosa_multiflora | Rmu_sc0000596.1_g000045 Rmu_sc0001918.1_g000016 Rmu_sc0005356.1_g000015 Rmu_sc0014902.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00134390 Rroxscaffold_3G00231710 Rroxscaffold_3G00231720 Rroxscaffold_4G00280010 Rroxscaffold_4G00327160 Rroxscaffold_4G00327170 Rroxscaffold_7G00188990 Rroxscaffold_7G00189000 |
| rosa_rugosa | Rorug02G0268600 Rorug05G0357900 |
| rosa_samantha | Rh1AG391900 Rh1AG412600 Rh1BG099500 Rh1CG169600 Rh3AG273100 Rh3AG296400 Rh3CG306500 Rh4DG384100 Rh6AG277600 Rh6CG216000 Rh7CG481400 Rh7DG054300 Rh7DG450100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 76 |
| AclWI | GGATC | 1 cut(s) | 120 |
| AcsI | RAATTY | 3 cut(s) | 90, 156, 179 |
| AgsI | TTSAA | 5 cut(s) | 67, 88, 121, 179, 184 |
| AluBI | AGCT | 4 cut(s) | 26, 63, 128, 260 |
| AluI | AGCT | 4 cut(s) | 26, 63, 128, 260 |
| AlwI | GGATC | 1 cut(s) | 120 |
| ApeKI | GCWGC | 1 cut(s) | 128 |
| ApoI | RAATTY | 3 cut(s) | 90, 156, 179 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 92 |
| AspS9I | GGNCC | 1 cut(s) | 223 |
| AsuC2I | CCSGG | 1 cut(s) | 216 |
| AsuHPI | GGTGA | 2 cut(s) | 88, 230 |
| AvaII | GGWCC | 1 cut(s) | 223 |
| BanI | GGYRCC | 1 cut(s) | 76 |
| BbvI | GCAGC | 1 cut(s) | 115 |
| BccI | CCATC | 1 cut(s) | 140 |
| BciVI | GTATCC | 1 cut(s) | 282 |
| BcnI | CCSGG | 1 cut(s) | 216 |
| BfaI | CTAG | 1 cut(s) | 282 |
| BfuI | GTATCC | 1 cut(s) | 282 |
| BisI | GCNGC | 1 cut(s) | 129 |
| BlsI | GCNGC | 1 cut(s) | 130 |
| Bme1390I | CCNGG | 1 cut(s) | 216 |
| Bme18I | GGWCC | 1 cut(s) | 223 |
| BmgT120I | GGNCC | 1 cut(s) | 223 |
| BmiI | GGNNCC | 1 cut(s) | 78 |
| BmrFI | CCNGG | 1 cut(s) | 216 |
| BmsI | GCATC | 1 cut(s) | 233 |
| BpuMI | CCSGG | 1 cut(s) | 216 |
| Bse1I | ACTGG | 1 cut(s) | 200 |
| BseGI | GGATG | 1 cut(s) | 248 |
| BseNI | ACTGG | 1 cut(s) | 200 |
| BseRI | GAGGAG | 1 cut(s) | 36 |
| BseXI | GCAGC | 1 cut(s) | 115 |
| BshNI | GGYRCC | 1 cut(s) | 76 |
| BsiSI | CCGG | 1 cut(s) | 216 |
| Bsp143I | GATC | 1 cut(s) | 112 |
| BspLI | GGNNCC | 1 cut(s) | 78 |
| BspPI | GGATC | 1 cut(s) | 120 |
| BspT107I | GGYRCC | 1 cut(s) | 76 |
| BsrI | ACTGG | 1 cut(s) | 200 |
| BssMI | GATC | 1 cut(s) | 112 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 252 |
| BstF5I | GGATG | 1 cut(s) | 248 |
| BstKTI | GATC | 1 cut(s) | 115 |
| BstMBI | GATC | 1 cut(s) | 112 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 236, 252 |
| BstSCI | CCNGG | 1 cut(s) | 214 |
| BstV1I | GCAGC | 1 cut(s) | 115 |
| BsuI | GTATCC | 1 cut(s) | 282 |
| BtsCI | GGATG | 1 cut(s) | 248 |
| Cfr13I | GGNCC | 1 cut(s) | 223 |
| CviJI | RGCY | 5 cut(s) | 26, 63, 128, 260, 333 |
| CviKI_1 | RGCY | 5 cut(s) | 26, 63, 128, 260, 333 |
| DpnI | GATC | 1 cut(s) | 114 |
| DpnII | GATC | 1 cut(s) | 112 |
| DraI | TTTAAA | 1 cut(s) | 57 |
| Eco47I | GGWCC | 1 cut(s) | 223 |
| EcoO109I | RGGNCCY | 1 cut(s) | 223 |
| EcoRI | GAATTC | 1 cut(s) | 179 |
| FaiI | YATR | 3 cut(s) | 32, 102, 294 |
| Fnu4HI | GCNGC | 1 cut(s) | 129 |
| FokI | GGATG | 1 cut(s) | 255 |
| Fsp4HI | GCNGC | 1 cut(s) | 129 |
| FspBI | CTAG | 1 cut(s) | 282 |
| GluI | GCNGC | 1 cut(s) | 129 |
| HapII | CCGG | 1 cut(s) | 216 |
| HinfI | GANTC | 1 cut(s) | 341 |
| HpaII | CCGG | 1 cut(s) | 216 |
| HphI | GGTGA | 2 cut(s) | 88, 230 |
| Hpy188III | TCNNGA | 4 cut(s) | 18, 184, 282, 345 |
| HpyAV | CCTTC | 1 cut(s) | 67 |
| HpyCH4V | TGCA | 3 cut(s) | 37, 246, 255 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 236, 252 |
| Kzo9I | GATC | 1 cut(s) | 112 |
| LmnI | GCTCC | 1 cut(s) | 23 |
| LpnPI | CCDG | 3 cut(s) | 213, 225, 229 |
| Lsp1109I | GCAGC | 1 cut(s) | 115 |
| LweI | GCATC | 1 cut(s) | 233 |
| MaeI | CTAG | 1 cut(s) | 282 |
| MaeIII | GTNAC | 1 cut(s) | 207 |
| MalI | GATC | 1 cut(s) | 114 |
| MboI | GATC | 1 cut(s) | 112 |
| MboII | GAAGA | 1 cut(s) | 127 |
| MfeI | CAATTG | 1 cut(s) | 107 |
| MluCI | AATT | 5 cut(s) | 90, 107, 156, 174, 179 |
| MnlI | CCTC | 8 cut(s) | 14, 43, 180, 214, 222, 236, 278, 331 |
| MroXI | GAANNNNTTC | 1 cut(s) | 92 |
| MseI | TTAA | 1 cut(s) | 56 |
| MspI | CCGG | 1 cut(s) | 216 |
| MspR9I | CCNGG | 1 cut(s) | 216 |
| MunI | CAATTG | 1 cut(s) | 107 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 236, 252 |
| NciI | CCSGG | 1 cut(s) | 216 |
| NdeII | GATC | 1 cut(s) | 112 |
| NlaIV | GGNNCC | 1 cut(s) | 78 |
| PdmI | GAANNNNTTC | 1 cut(s) | 92 |
| PfeI | GAWTC | 1 cut(s) | 341 |
| PkrI | GCNGC | 1 cut(s) | 130 |
| PpuMI | RGGWCCY | 1 cut(s) | 223 |
| Psp5II | RGGWCCY | 1 cut(s) | 223 |
| PspN4I | GGNNCC | 1 cut(s) | 78 |
| PspPI | GGNCC | 1 cut(s) | 223 |
| PspPPI | RGGWCCY | 1 cut(s) | 223 |
| SaqAI | TTAA | 1 cut(s) | 56 |
| SatI | GCNGC | 1 cut(s) | 129 |
| Sau3AI | GATC | 1 cut(s) | 112 |
| Sau96I | GGNCC | 1 cut(s) | 223 |
| ScrFI | CCNGG | 1 cut(s) | 216 |
| SetI | ASST | 9 cut(s) | 28, 54, 65, 78, 101, 130, 214, 225, 262 |
| SfaNI | GCATC | 1 cut(s) | 233 |
| SinI | GGWCC | 1 cut(s) | 223 |
| Sse9I | AATT | 5 cut(s) | 90, 107, 156, 174, 179 |
| SspMI | CTAG | 1 cut(s) | 282 |
| StyD4I | CCNGG | 1 cut(s) | 214 |
| TaqI | TCGA | 2 cut(s) | 48, 344 |
| TaqII | GACCGA | 1 cut(s) | 179 |
| TasI | AATT | 5 cut(s) | 90, 107, 156, 174, 179 |
| TfiI | GAWTC | 1 cut(s) | 341 |
| Tru1I | TTAA | 1 cut(s) | 56 |
| Tru9I | TTAA | 1 cut(s) | 56 |
| TseI | GCWGC | 1 cut(s) | 128 |
| TspDTI | ATGAA | 1 cut(s) | 117 |
| TspGWI | ACGGA | 1 cut(s) | 185 |
| VpaK11BI | GGWCC | 1 cut(s) | 223 |
| XapI | RAATTY | 3 cut(s) | 90, 156, 179 |
| XbaI | TCTAGA | 1 cut(s) | 281 |
| XmnI | GAANNNNTTC | 1 cut(s) | 92 |
| XspI | CTAG | 1 cut(s) | 282 |