mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0343391 RchiOBHm_Chr2g0162991 RchiOBHm_Chr4g0397821 RchiOBHm_Chr7g0183001 RchiOBHm_Chr7g0186671 |
| rosa_laevigata | RLG00000010466 RLG00000034508 |
| rosa_multiflora | Rmu_sc0000596.1_g000045 Rmu_sc0001918.1_g000016 Rmu_sc0005356.1_g000015 Rmu_sc0014902.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00134390 Rroxscaffold_3G00231710 Rroxscaffold_3G00231720 Rroxscaffold_4G00280010 Rroxscaffold_4G00327160 Rroxscaffold_4G00327170 Rroxscaffold_7G00188990 Rroxscaffold_7G00189000 |
| rosa_rugosa | Rorug02G0268600 Rorug05G0357900 |
| rosa_samantha | Rh1AG391900 Rh1AG412600 Rh1BG099500 Rh1CG169600 Rh3AG273100 Rh3AG296400 Rh3CG306500 Rh4DG384100 Rh6AG277600 Rh6CG216000 Rh7CG481400 Rh7DG054300 Rh7DG450100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 256 |
| AclWI | GGATC | 1 cut(s) | 300 |
| AcsI | RAATTY | 2 cut(s) | 97, 270 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 154 |
| AgsI | TTSAA | 2 cut(s) | 86, 268 |
| AluBI | AGCT | 2 cut(s) | 205, 243 |
| AluI | AGCT | 2 cut(s) | 205, 243 |
| Alw26I | GTCTC | 1 cut(s) | 335 |
| AlwI | GGATC | 1 cut(s) | 300 |
| ApeKI | GCWGC | 1 cut(s) | 18 |
| ApoI | RAATTY | 2 cut(s) | 97, 270 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 272 |
| BanI | GGYRCC | 1 cut(s) | 256 |
| BbvI | GCAGC | 1 cut(s) | 30 |
| BccI | CCATC | 1 cut(s) | 97 |
| BcoDI | GTCTC | 1 cut(s) | 335 |
| BisI | GCNGC | 1 cut(s) | 19 |
| BlsI | GCNGC | 1 cut(s) | 20 |
| BmiI | GGNNCC | 1 cut(s) | 258 |
| BmsI | GCATC | 1 cut(s) | 94 |
| BsaJI | CCNNGG | 2 cut(s) | 31, 153 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 154 |
| BseDI | CCNNGG | 2 cut(s) | 31, 153 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 154 |
| BseMII | CTCAG | 1 cut(s) | 77 |
| BseXI | GCAGC | 1 cut(s) | 30 |
| BseYI | CCCAGC | 1 cut(s) | 14 |
| BshNI | GGYRCC | 1 cut(s) | 256 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 154 |
| BsmAI | GTCTC | 1 cut(s) | 335 |
| Bsp143I | GATC | 1 cut(s) | 292 |
| BspCNI | CTCAG | 1 cut(s) | 76 |
| BspLI | GGNNCC | 1 cut(s) | 258 |
| BspPI | GGATC | 1 cut(s) | 300 |
| BspT107I | GGYRCC | 1 cut(s) | 256 |
| BssECI | CCNNGG | 2 cut(s) | 31, 153 |
| BssMI | GATC | 1 cut(s) | 292 |
| BssT1I | CCWWGG | 2 cut(s) | 31, 153 |
| BstDEI | CTNAG | 1 cut(s) | 63 |
| BstKTI | GATC | 1 cut(s) | 295 |
| BstMAI | GTCTC | 1 cut(s) | 335 |
| BstMBI | GATC | 1 cut(s) | 292 |
| BstV1I | GCAGC | 1 cut(s) | 30 |
| BtsI | GCAGTG | 1 cut(s) | 131 |
| BtsIMutI | CAGTG | 2 cut(s) | 131, 318 |
| CviAII | CATG | 2 cut(s) | 131, 180 |
| CviJI | RGCY | 3 cut(s) | 21, 205, 243 |
| CviKI_1 | RGCY | 3 cut(s) | 21, 205, 243 |
| DdeI | CTNAG | 1 cut(s) | 63 |
| DpnI | GATC | 1 cut(s) | 294 |
| DpnII | GATC | 1 cut(s) | 292 |
| DraI | TTTAAA | 1 cut(s) | 237 |
| Eco130I | CCWWGG | 2 cut(s) | 31, 153 |
| Eco32I | GATATC | 1 cut(s) | 313 |
| EcoRV | GATATC | 1 cut(s) | 313 |
| EcoT14I | CCWWGG | 2 cut(s) | 31, 153 |
| ErhI | CCWWGG | 2 cut(s) | 31, 153 |
| FaeI | CATG | 2 cut(s) | 134, 183 |
| FaiI | YATR | 4 cut(s) | 47, 132, 181, 282 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 15, 47 |
| FatI | CATG | 2 cut(s) | 130, 179 |
| Fnu4HI | GCNGC | 1 cut(s) | 19 |
| Fsp4HI | GCNGC | 1 cut(s) | 19 |
| GluI | GCNGC | 1 cut(s) | 19 |
| GsaI | CCCAGC | 1 cut(s) | 18 |
| Hin1II | CATG | 2 cut(s) | 134, 183 |
| HinfI | GANTC | 2 cut(s) | 67, 112 |
| Hpy166II | GTNNAC | 1 cut(s) | 10 |
| Hpy188I | TCNGA | 3 cut(s) | 66, 103, 229 |
| Hpy8I | GTNNAC | 1 cut(s) | 10 |
| HpyAV | CCTTC | 1 cut(s) | 247 |
| HpyF3I | CTNAG | 1 cut(s) | 63 |
| Hsp92II | CATG | 2 cut(s) | 134, 183 |
| Kzo9I | GATC | 1 cut(s) | 292 |
| LpnPI | CCDG | 2 cut(s) | 18, 28 |
| Lsp1109I | GCAGC | 1 cut(s) | 30 |
| LweI | GCATC | 1 cut(s) | 94 |
| MaeIII | GTNAC | 1 cut(s) | 116 |
| MalI | GATC | 1 cut(s) | 294 |
| MboI | GATC | 1 cut(s) | 292 |
| MboII | GAAGA | 1 cut(s) | 307 |
| MluCI | AATT | 3 cut(s) | 55, 97, 270 |
| MmeI | TCCRAC | 1 cut(s) | 141 |
| MnlI | CCTC | 3 cut(s) | 70, 158, 223 |
| MroXI | GAANNNNTTC | 1 cut(s) | 272 |
| MseI | TTAA | 3 cut(s) | 54, 236, 300 |
| NdeII | GATC | 1 cut(s) | 292 |
| NlaIII | CATG | 2 cut(s) | 134, 183 |
| NlaIV | GGNNCC | 1 cut(s) | 258 |
| NmuCI | GTSAC | 1 cut(s) | 116 |
| PdmI | GAANNNNTTC | 1 cut(s) | 272 |
| PfeI | GAWTC | 2 cut(s) | 67, 112 |
| PkrI | GCNGC | 1 cut(s) | 20 |
| PspFI | CCCAGC | 1 cut(s) | 14 |
| PspN4I | GGNNCC | 1 cut(s) | 258 |
| SaqAI | TTAA | 3 cut(s) | 54, 236, 300 |
| SatI | GCNGC | 1 cut(s) | 19 |
| Sau3AI | GATC | 1 cut(s) | 292 |
| SetI | ASST | 4 cut(s) | 207, 234, 245, 258 |
| SfaNI | GCATC | 1 cut(s) | 94 |
| Sse9I | AATT | 3 cut(s) | 55, 97, 270 |
| SspI | AATATT | 1 cut(s) | 140 |
| StyI | CCWWGG | 2 cut(s) | 31, 153 |
| TasI | AATT | 3 cut(s) | 55, 97, 270 |
| TfiI | GAWTC | 2 cut(s) | 67, 112 |
| Tru1I | TTAA | 3 cut(s) | 54, 236, 300 |
| Tru9I | TTAA | 3 cut(s) | 54, 236, 300 |
| TscAI | CASTG | 2 cut(s) | 131, 325 |
| TseFI | GTSAC | 1 cut(s) | 116 |
| TseI | GCWGC | 1 cut(s) | 18 |
| Tsp45I | GTSAC | 1 cut(s) | 116 |
| TspDTI | ATGAA | 3 cut(s) | 34, 150, 297 |
| TspRI | CASTG | 2 cut(s) | 131, 325 |
| XapI | RAATTY | 2 cut(s) | 97, 270 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 29 |
| XmnI | GAANNNNTTC | 1 cut(s) | 272 |