Rroxscaffold_6G00424060

FACT complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0006425
Physical Location & Seq
Forward (+)
45285199 .. 45286784
1586 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00424060.1

Sequence Viewer

Length: 1572 bp
ATGGCCAGTGATGATTTACATAGATTTGGTGAGAGATTGAAGAACTTGTACTCAAGTTGGGAAGGACAGAGATTGAACCTTTGGGGTTCGTCTAATGTTTTGACATTTGCAACATCTAGAAGATCAAATGAGCAAAAGATCAAACGATCAACAGATAAGAAGGCCCAAAGACGGAATACTCACCGTCTTAAAGCATCAGTTCTGTCTAAATGGCTGTTTGGCAGGGTAGTTTATGAAACTATCTTTGTTTTTACAAATGAGCAGATTCATTGCTTGTGCAGCAGCCAGGAGGTGCCTTTTCTGAAAGTTGTCCAACCACTTGCCAAGGAAGCCGTTGGTGTAGATGTTCTGTTGTATGTGAAGCCGGACAGTGATGATGGCAGTGCTCTGATGGATGATATTGTCAATACCTTTGATGATGTAGGTGTTGTTATTGGATATATAAAATTCGAGATTCTTAAAGGTGATCTAGCAAGGTTATGGTTCAAGAAGCTGAGTTGTGCCAAAAAACAGCAGGACAAGAGAATTCAACTGGTGGACATAAAGAAAGGGTTGTCTAAGTTGTTTTCCGTGAAAGACATTGAGGAAATTGAGAAGGTCAAGAAAGCCGCCTACTTTTCTACTGATGTGATGAAGAAGTTTATTACGCCGGAGCTTGACAAGATTATGAAAAGGGAGGAGAAGGTCTCTCATTCTTCTCTAAGTAAGGAGACGTTGAAGGCTATACTGCAACCCTCTAAGACTCACCTGAACCATGCAGATGAATTTGCTATCGCTTTTGATCCAGTTTTCCAAAGTGGGGGCCCTGGTGTACCTTGCGATAACAAGCTCCTTAAATATAGTTCTCATGATGTTATCATATCCTCTGTTGGAACCAGGTTTGAGAATTACTGCTCTTTTATTGCCAGGACCTTTCTGATTGATCCCATTGACCTTCAGCGCAAGGCATATGAAGTTCTTTACAAGGCCCATGAAGCAGACATCAGTGAGTTGAAGCCCGGCAACAAAGTTAGTGCTGCTTATGAAACAGCAGTTTCTGTTGTAAAGAAGGAGGGTCCTGAATTGTCTTGTAAGCTGACAAAACATGCTGGATCAGGCATTGGTCTTGAGCTCTCTGAATCTGGGTTGAATCTTAATGAGAAAAATGGGGAACTGGTGAAAGAAGGCATGGTGTTCAATGTGTCCCTCGGATTTCAGAACCTGCAGAGTAATCTAAAAGGAAAAGAATTCTCTCTGTGGCTAGCAGACACTGTTATTGTAAACAGTGTTAATCCTGAGGTTCTGACAGCGGGGTGTTCTAAAACCATTGAGAATATTAAATTACCCTTAGCTGGAGGAGAAAGGCAGCCAGAGTTCGTGATATTAGAAGATGATGATGATGAAGAAATCTGCAAAAAACGGAAAAGAAGAGAGATGGAGGACTTGGAAGAAGCTTATAGTATACTGACCCAATTGGATGCAAATATTAATGATACTGAGGCGCTTAATATCAAGTTGGAAGAGATCAATGCTGCAACCAATAACTACAAAATAACACTATTATTTATCAATAGCAGACTCCAAAACCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000228 GO:0000785 GO:0000790 GO:0000791 GO:0003006 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005719 GO:0005730 GO:0006139 GO:0006325 GO:0006333 GO:0006351 GO:0006354 GO:0006355 GO:0006357 GO:0006366 GO:0006368 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008023 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031491 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0034243 GO:0034641 GO:0034645 GO:0034654 GO:0034724 GO:0034728 GO:0035101 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044877 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FACT-Spt16_Nlob Peptidase_M24 Rtt106 SPT16

Protein Analysis

523

Amino Acids

58.97

Weight (kDa)

6.79

Isoelectric Point (pI)

41.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FACT-Spt16_Nlob PF14826 5 - 182 3.4e-19 FACT complex subunit SPT16 N-terminal lobe domain
Peptidase_M24 PF00557 199 - 421 2.2e-24 Metallopeptidase family M24
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1209
AccB1I GGYRCC 1 cut(s) 292
AccI GTMKAC 1 cut(s) 1441
AciI CCGC 2 cut(s) 609, 1289
AclWI GGATC 3 cut(s) 776, 917, 1099
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 4 cut(s) 446, 525, 764, 1226
AcuI CTGAAG 1 cut(s) 920
AfaI GTAC 2 cut(s) 50, 813
AfiI CCNNNNNNNGG 3 cut(s) 171, 799, 1331
AgsI TTSAA 8 cut(s) 40, 76, 487, 530, 718, 994, 1129, 1177
AjnI CCWGG 4 cut(s) 285, 805, 875, 905
AluBI AGCT 7 cut(s) 493, 655, 829, 1075, 1111, 1331, 1433
AluI AGCT 7 cut(s) 493, 655, 829, 1075, 1111, 1331, 1433
Alw21I GWGCWC 2 cut(s) 388, 1113
Alw26I GTCTC 2 cut(s) 691, 704
AlwI GGATC 3 cut(s) 776, 917, 1099
AlwNI CAGNNNCTG 3 cut(s) 1037, 1201, 1250
AoxI GGCC 4 cut(s) 3, 162, 802, 966
ApaI GGGCCC 1 cut(s) 806
ApeKI GCWGC 5 cut(s) 279, 282, 1016, 1345, 1511
ApoI RAATTY 4 cut(s) 446, 525, 764, 1226
AseI ATTAAT 1 cut(s) 1467
AspLEI GCGC 2 cut(s) 942, 1483
AspS9I GGNCC 6 cut(s) 163, 802, 803, 909, 967, 1055
AsuC2I CCSGG 1 cut(s) 999
AsuHPI GGTGA 5 cut(s) 41, 173, 476, 737, 1168
AsuNHI GCTAGC 1 cut(s) 1240
AvaII GGWCC 2 cut(s) 909, 1055
AxyI CCTNAGG 1 cut(s) 1275
BaeGI GKGCMC 1 cut(s) 806
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 292
BanII GRGCYC 2 cut(s) 806, 1113
BarI GAAGNNNNNNTAC 2 cut(s) 32, 64
Bbv12I GWGCWC 2 cut(s) 388, 1113
BbvI GCAGC 5 cut(s) 291, 294, 1003, 1357, 1498
BccI CCATC 3 cut(s) 371, 385, 1408
BceAI ACGGC 1 cut(s) 317
BciT130I CCWGG 4 cut(s) 287, 807, 877, 907
BcnI CCSGG 1 cut(s) 999
BcoDI GTCTC 2 cut(s) 691, 704
BfaI CTAG 3 cut(s) 117, 470, 1241
BfmI CTRYAG 1 cut(s) 1202
BfoI RGCGCY 1 cut(s) 1484
BfuAI ACCTGC 1 cut(s) 1209
BisI GCNGC 6 cut(s) 280, 283, 609, 1017, 1346, 1512
BlsI GCNGC 6 cut(s) 281, 284, 610, 1018, 1347, 1513
Bme1390I CCNGG 5 cut(s) 287, 807, 877, 907, 999
Bme18I GGWCC 2 cut(s) 909, 1055
BmgT120I GGNCC 6 cut(s) 163, 802, 803, 909, 967, 1055
BmiI GGNNCC 5 cut(s) 294, 803, 804, 874, 1056
BmrFI CCNGG 5 cut(s) 287, 807, 877, 907, 999
BmsI GCATC 2 cut(s) 203, 1447
BmtI GCTAGC 1 cut(s) 1244
BplI GAGNNNNNCTC 2 cut(s) 671, 703
BpmI CTGGAG 1 cut(s) 1353
Bpu10I CCTNAGC 1 cut(s) 1327
BpuEI CTTGAG 2 cut(s) 37, 1127
BpuMI CCSGG 1 cut(s) 999
BsaI GGTCTC 1 cut(s) 691
BsaJI CCNNGG 3 cut(s) 324, 805, 1186
Bsc4I CCNNNNNNNGG 3 cut(s) 171, 799, 1331
Bse1I ACTGG 4 cut(s) 6, 537, 785, 1158
Bse21I CCTNAGG 1 cut(s) 1275
Bse3DI GCAATG 1 cut(s) 268
BseBI CCWGG 4 cut(s) 287, 807, 877, 907
BseDI CCNNGG 3 cut(s) 324, 805, 1186
BseGI GGATG 2 cut(s) 400, 1462
BseLI CCNNNNNNNGG 3 cut(s) 171, 799, 1331
BseMI GCAATG 1 cut(s) 268
BseMII CTCAG 3 cut(s) 485, 1266, 1467
BseNI ACTGG 4 cut(s) 6, 537, 785, 1158
BseRI GAGGAG 2 cut(s) 692, 1350
BseSI GKGCMC 1 cut(s) 806
BseXI GCAGC 5 cut(s) 291, 294, 1003, 1357, 1498
BsgI GTGCAG 1 cut(s) 298
BshFI GGCC 4 cut(s) 5, 164, 804, 968
BshNI GGYRCC 1 cut(s) 292
BsiHKAI GWGCWC 2 cut(s) 388, 1113
BsiSI CCGG 3 cut(s) 365, 650, 999
BslFI GGGAC 1 cut(s) 1168
BslI CCNNNNNNNGG 3 cut(s) 171, 799, 1331
BsmAI GTCTC 2 cut(s) 691, 704
BsmBI CGTCTC 1 cut(s) 704
BsmFI GGGAC 1 cut(s) 1168
BsnI GGCC 4 cut(s) 5, 164, 804, 968
Bso31I GGTCTC 1 cut(s) 691
Bsp120I GGGCCC 1 cut(s) 802
Bsp1286I GDGCHC 3 cut(s) 388, 806, 1113
Bsp143I GATC 8 cut(s) 122, 138, 146, 466, 781, 922, 1091, 1503
BspACI CCGC 2 cut(s) 609, 1289
BspANI GGCC 4 cut(s) 5, 164, 804, 968
BspCNI CTCAG 3 cut(s) 486, 1267, 1468
BspHI TCATGA 1 cut(s) 847
BspLI GGNNCC 5 cut(s) 294, 803, 804, 874, 1056
BspMAI CTGCAG 1 cut(s) 1206
BspMI ACCTGC 1 cut(s) 1209
BspOI GCTAGC 1 cut(s) 1244
BspPI GGATC 3 cut(s) 776, 917, 1099
BspT107I GGYRCC 1 cut(s) 292
BspTNI GGTCTC 1 cut(s) 691
BsrDI GCAATG 1 cut(s) 268
BsrI ACTGG 4 cut(s) 6, 537, 785, 1158
BssECI CCNNGG 3 cut(s) 324, 805, 1186
BssMI GATC 8 cut(s) 122, 138, 146, 466, 781, 922, 1091, 1503
BssNAI GTATAC 1 cut(s) 1442
BssT1I CCWWGG 1 cut(s) 324
Bst1107I GTATAC 1 cut(s) 1442
Bst2UI CCWGG 4 cut(s) 287, 807, 877, 907
Bst4CI ACNGT 4 cut(s) 185, 371, 1252, 1265
Bst6I CTCTTC 2 cut(s) 1402, 1494
BstC8I GCNNGC 1 cut(s) 1242
BstDEI CTNAG 7 cut(s) 494, 558, 701, 738, 1275, 1327, 1476
BstF5I GGATG 2 cut(s) 400, 1462
BstH2I RGCGCY 1 cut(s) 1484
BstHHI GCGC 2 cut(s) 942, 1483
BstKTI GATC 8 cut(s) 125, 141, 149, 469, 784, 925, 1094, 1506
BstMAI GTCTC 2 cut(s) 691, 704
BstMBI GATC 8 cut(s) 122, 138, 146, 466, 781, 922, 1091, 1503
BstMWI GCNNNNNNNGC 3 cut(s) 279, 329, 974
BstNI CCWGG 4 cut(s) 287, 807, 877, 907
BstNSI RCATGY 1 cut(s) 1088
BstSCI CCNGG 5 cut(s) 285, 805, 875, 905, 997
BstSFI CTRYAG 1 cut(s) 1202
BstSLI GKGCMC 1 cut(s) 806
BstV1I GCAGC 5 cut(s) 291, 294, 1003, 1357, 1498
BstZ17I GTATAC 1 cut(s) 1442
Bsu36I CCTNAGG 1 cut(s) 1275
BsuRI GGCC 4 cut(s) 5, 164, 804, 968
BtsCI GGATG 2 cut(s) 400, 1462
BtsI GCAGTG 1 cut(s) 388
BtsIMutI CAGTG 6 cut(s) 13, 376, 388, 991, 1248, 1270
BveI ACCTGC 1 cut(s) 1209
Cac8I GCNNGC 1 cut(s) 1242
CaiI CAGNNNCTG 3 cut(s) 1037, 1201, 1250
CciI TCATGA 1 cut(s) 847
CfoI GCGC 2 cut(s) 942, 1483
Cfr13I GGNCC 6 cut(s) 163, 802, 803, 909, 967, 1055
CsiI ACCWGGT 1 cut(s) 875
Csp6I GTAC 2 cut(s) 49, 812
CviAII CATG 5 cut(s) 755, 848, 971, 1085, 1168
CviQI GTAC 2 cut(s) 49, 812
DdeI CTNAG 7 cut(s) 494, 558, 701, 738, 1275, 1327, 1476
DpnI GATC 8 cut(s) 124, 140, 148, 468, 783, 924, 1093, 1505
DpnII GATC 8 cut(s) 122, 138, 146, 466, 781, 922, 1091, 1503
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 1402, 1494
EarI CTCTTC 2 cut(s) 1402, 1494
Ecl136II GAGCTC 1 cut(s) 1111
Eco130I CCWWGG 1 cut(s) 324
Eco24I GRGCYC 2 cut(s) 806, 1113
Eco31I GGTCTC 1 cut(s) 691
Eco47I GGWCC 2 cut(s) 909, 1055
Eco53kI GAGCTC 1 cut(s) 1111
Eco57I CTGAAG 1 cut(s) 920
Eco81I CCTNAGG 1 cut(s) 1275
EcoICRI GAGCTC 1 cut(s) 1111
EcoO109I RGGNCCY 4 cut(s) 802, 803, 909, 1055
EcoRI GAATTC 2 cut(s) 525, 1226
EcoRII CCWGG 4 cut(s) 285, 805, 875, 905
EcoT14I CCWWGG 1 cut(s) 324
EcoT38I GRGCYC 2 cut(s) 806, 1113
ErhI CCWWGG 1 cut(s) 324
Esp3I CGTCTC 1 cut(s) 704
FaeI CATG 5 cut(s) 758, 851, 974, 1088, 1171
FaqI GGGAC 1 cut(s) 1168
FatI CATG 5 cut(s) 754, 847, 970, 1084, 1167
FauI CCCGC 1 cut(s) 1282
FauNDI CATATG 1 cut(s) 949
FblI GTMKAC 1 cut(s) 1441
Fnu4HI GCNGC 6 cut(s) 280, 283, 609, 1017, 1346, 1512
FokI GGATG 2 cut(s) 407, 1469
FriOI GRGCYC 2 cut(s) 806, 1113
Fsp4HI GCNGC 6 cut(s) 280, 283, 609, 1017, 1346, 1512
FspBI CTAG 3 cut(s) 117, 470, 1241
GlaI GCGC 2 cut(s) 941, 1482
GluI GCNGC 6 cut(s) 280, 283, 609, 1017, 1346, 1512
GsuI CTGGAG 1 cut(s) 1353
HaeII RGCGCY 1 cut(s) 1484
HaeIII GGCC 4 cut(s) 5, 164, 804, 968
HapII CCGG 3 cut(s) 365, 650, 999
HhaI GCGC 2 cut(s) 942, 1483
Hin1II CATG 5 cut(s) 758, 851, 974, 1088, 1171
Hin6I GCGC 2 cut(s) 940, 1481
HinP1I GCGC 2 cut(s) 940, 1481
HindIII AAGCTT 1 cut(s) 1431
HinfI GANTC 6 cut(s) 265, 454, 742, 1118, 1129, 1557
HpaII CCGG 3 cut(s) 365, 650, 999
HphI GGTGA 5 cut(s) 41, 173, 476, 737, 1168
Hpy166II GTNNAC 4 cut(s) 538, 812, 1261, 1442
Hpy188I TCNGA 7 cut(s) 303, 390, 918, 1117, 1190, 1197, 1284
Hpy188III TCNNGA 9 cut(s) 117, 451, 487, 601, 848, 1058, 1106, 1274, 1357
Hpy8I GTNNAC 4 cut(s) 538, 812, 1261, 1442
HpyAV CCTTC 8 cut(s) 56, 154, 589, 676, 712, 944, 1042, 1157
HpyCH4III ACNGT 4 cut(s) 185, 371, 1252, 1265
HpyCH4IV ACGT 1 cut(s) 713
HpyCH4V TGCA 8 cut(s) 110, 279, 730, 758, 1204, 1392, 1460, 1514
HpyF10VI GCNNNNNNNGC 3 cut(s) 279, 329, 974
HpyF3I CTNAG 7 cut(s) 494, 558, 701, 738, 1275, 1327, 1476
HpySE526I ACGT 1 cut(s) 713
Hsp92II CATG 5 cut(s) 758, 851, 974, 1088, 1171
HspAI GCGC 2 cut(s) 940, 1481
Kzo9I GATC 8 cut(s) 122, 138, 146, 466, 781, 922, 1091, 1503
LmnI GCTCC 2 cut(s) 652, 834
Lsp1109I GCAGC 5 cut(s) 291, 294, 1003, 1357, 1498
LweI GCATC 2 cut(s) 203, 1447
MabI ACCWGGT 1 cut(s) 875
MaeI CTAG 3 cut(s) 117, 470, 1241
MaeII ACGT 1 cut(s) 713
MalI GATC 8 cut(s) 124, 140, 148, 468, 783, 924, 1093, 1505
MboI GATC 8 cut(s) 122, 138, 146, 466, 781, 922, 1091, 1503
MboII GAAGA 9 cut(s) 52, 132, 646, 687, 1379, 1394, 1419, 1439, 1511
MfeI CAATTG 1 cut(s) 1451
MhlI GDGCHC 3 cut(s) 388, 806, 1113
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 9 cut(s) 446, 525, 588, 764, 886, 1061, 1226, 1319, 1451
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 736, 1551
MmeI TCCRAC 3 cut(s) 337, 850, 1476
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 8 cut(s) 189, 459, 834, 1134, 1269, 1317, 1467, 1485
MslI CAYNNNNRTG 1 cut(s) 759
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 1289
MspI CCGG 3 cut(s) 365, 650, 999
MspR9I CCNGG 5 cut(s) 287, 807, 877, 907, 999
MunI CAATTG 1 cut(s) 1451
MvaI CCWGG 4 cut(s) 287, 807, 877, 907
MwoI GCNNNNNNNGC 3 cut(s) 279, 329, 974
NciI CCSGG 1 cut(s) 999
NdeI CATATG 1 cut(s) 949
NdeII GATC 8 cut(s) 122, 138, 146, 466, 781, 922, 1091, 1503
NheI GCTAGC 1 cut(s) 1240
NlaIII CATG 5 cut(s) 758, 851, 974, 1088, 1171
NlaIV GGNNCC 5 cut(s) 294, 803, 804, 874, 1056
NspI RCATGY 1 cut(s) 1088
PagI TCATGA 1 cut(s) 847
PfeI GAWTC 4 cut(s) 265, 454, 1118, 1129
PkrI GCNGC 6 cut(s) 281, 284, 610, 1018, 1347, 1513
PleI GAGTC 2 cut(s) 736, 1551
PpsI GAGTC 2 cut(s) 736, 1551
PpuMI RGGWCCY 2 cut(s) 909, 1055
PshBI ATTAAT 1 cut(s) 1467
Psp124BI GAGCTC 1 cut(s) 1113
Psp5II RGGWCCY 2 cut(s) 909, 1055
Psp6I CCWGG 4 cut(s) 285, 805, 875, 905
PspGI CCWGG 4 cut(s) 285, 805, 875, 905
PspN4I GGNNCC 5 cut(s) 294, 803, 804, 874, 1056
PspOMI GGGCCC 1 cut(s) 802
PspPI GGNCC 6 cut(s) 163, 802, 803, 909, 967, 1055
PspPPI RGGWCCY 2 cut(s) 909, 1055
PstI CTGCAG 1 cut(s) 1206
PstNI CAGNNNCTG 3 cut(s) 1037, 1201, 1250
RsaI GTAC 2 cut(s) 50, 813
RsaNI GTAC 2 cut(s) 49, 812
RseI CAYNNNNRTG 1 cut(s) 759
SacI GAGCTC 1 cut(s) 1113
SaqAI TTAA 8 cut(s) 189, 459, 834, 1134, 1269, 1317, 1467, 1485
SatI GCNGC 6 cut(s) 280, 283, 609, 1017, 1346, 1512
Sau3AI GATC 8 cut(s) 122, 138, 146, 466, 781, 922, 1091, 1503
Sau96I GGNCC 6 cut(s) 163, 802, 803, 909, 967, 1055
SchI GAGTC 2 cut(s) 736, 1551
ScrFI CCNGG 5 cut(s) 287, 807, 877, 907, 999
SduI GDGCHC 3 cut(s) 388, 806, 1113
SexAI ACCWGGT 1 cut(s) 875
SfaNI GCATC 2 cut(s) 203, 1447
SfcI CTRYAG 1 cut(s) 1202
SinI GGWCC 2 cut(s) 909, 1055
SmiMI CAYNNNNRTG 1 cut(s) 759
SmlI CTYRAG 2 cut(s) 52, 1106
SmoI CTYRAG 2 cut(s) 52, 1106
Sse9I AATT 9 cut(s) 446, 525, 588, 764, 886, 1061, 1226, 1319, 1451
SsiI CCGC 2 cut(s) 609, 1289
SspI AATATT 2 cut(s) 1315, 1465
SspMI CTAG 3 cut(s) 117, 470, 1241
SstI GAGCTC 1 cut(s) 1113
StyD4I CCNGG 5 cut(s) 285, 805, 875, 905, 997
StyI CCWWGG 1 cut(s) 324
TaaI ACNGT 4 cut(s) 185, 371, 1252, 1265
TaiI ACGT 1 cut(s) 716
TaqI TCGA 1 cut(s) 450
TasI AATT 9 cut(s) 446, 525, 588, 764, 886, 1061, 1226, 1319, 1451
TatI WGTACW 1 cut(s) 48
TauI GCSGC 1 cut(s) 611
TfiI GAWTC 4 cut(s) 265, 454, 1118, 1129
Tru1I TTAA 8 cut(s) 189, 459, 834, 1134, 1269, 1317, 1467, 1485
Tru9I TTAA 8 cut(s) 189, 459, 834, 1134, 1269, 1317, 1467, 1485
TscAI CASTG 6 cut(s) 13, 376, 388, 991, 1255, 1270
TseI GCWGC 5 cut(s) 279, 282, 1016, 1345, 1511
TspDTI ATGAA 9 cut(s) 249, 257, 647, 683, 777, 966, 987, 1038, 1395
TspGWI ACGGA 3 cut(s) 187, 559, 1414
TspRI CASTG 6 cut(s) 13, 376, 388, 991, 1255, 1270
VpaK11BI GGWCC 2 cut(s) 909, 1055
VspI ATTAAT 1 cut(s) 1467
XapI RAATTY 4 cut(s) 446, 525, 764, 1226
XbaI TCTAGA 1 cut(s) 116
XceI RCATGY 1 cut(s) 1088
XmiI GTMKAC 1 cut(s) 1441
XspI CTAG 3 cut(s) 117, 470, 1241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.