No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0455531 RchiOBHm_Chr3g0455581 RchiOBHm_Chr5g0002701 RchiOBHm_Chr6g0248951 |
| rosa_laevigata | RLG00000025338 |
| rosa_multiflora | Rmu_co8241263.1_g000001 Rmu_sc0006994.1_g000001 Rmu_sc0009084.1_g000018 |
| rosa_roxburghii | Rroxscaffold_1G00073180 Rroxscaffold_6G00423550 Rroxscaffold_6G00424060 Rroxscaffold_6G00424070 |
| rosa_rugosa | Rorug03G0008400 Rorug03G0008400 Rorug04G0398400 |
| rosa_samantha | Rh3DG071500 Rh3DG071600 Rh4CG231700 Rh5AG021700 Rh5BG024600 Rh5BG366200 Rh5CG024000 Rh5DG023000 Rh6AG051900 |
| rosa_wichuraiana | Rw3G005400 Rw3G005430 Rw5G002020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 190 |
| AciI | CCGC | 3 cut(s) | 202, 238, 263 |
| AclWI | GGATC | 3 cut(s) | 33, 135, 148 |
| AcsI | RAATTY | 1 cut(s) | 41 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 201 |
| AgsI | TTSAA | 3 cut(s) | 41, 47, 245 |
| AjnI | CCWGG | 1 cut(s) | 210 |
| AluBI | AGCT | 1 cut(s) | 178 |
| AluI | AGCT | 1 cut(s) | 178 |
| Alw26I | GTCTC | 1 cut(s) | 258 |
| AlwI | GGATC | 3 cut(s) | 33, 135, 148 |
| ApoI | RAATTY | 1 cut(s) | 41 |
| AsuHPI | GGTGA | 1 cut(s) | 295 |
| AxyI | CCTNAGG | 1 cut(s) | 120 |
| BamHI | GGATCC | 1 cut(s) | 140 |
| BciT130I | CCWGG | 1 cut(s) | 212 |
| BcoDI | GTCTC | 1 cut(s) | 258 |
| Bme1390I | CCNGG | 1 cut(s) | 212 |
| BmiI | GGNNCC | 1 cut(s) | 142 |
| BmrFI | CCNGG | 1 cut(s) | 212 |
| BpuEI | CTTGAG | 1 cut(s) | 164 |
| BsaI | GGTCTC | 1 cut(s) | 258 |
| BsaJI | CCNNGG | 1 cut(s) | 211 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 201 |
| Bse21I | CCTNAGG | 1 cut(s) | 120 |
| BseBI | CCWGG | 1 cut(s) | 212 |
| BseDI | CCNNGG | 1 cut(s) | 211 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 201 |
| BseMII | CTCAG | 1 cut(s) | 111 |
| BseRI | GAGGAG | 3 cut(s) | 101, 246, 249 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 201 |
| BsmAI | GTCTC | 1 cut(s) | 258 |
| BsmI | GAATGC | 1 cut(s) | 240 |
| Bso31I | GGTCTC | 1 cut(s) | 258 |
| Bsp143I | GATC | 2 cut(s) | 25, 140 |
| BspACI | CCGC | 3 cut(s) | 202, 238, 263 |
| BspCNI | CTCAG | 1 cut(s) | 112 |
| BspLI | GGNNCC | 1 cut(s) | 142 |
| BspPI | GGATC | 3 cut(s) | 33, 135, 148 |
| BspTNI | GGTCTC | 1 cut(s) | 258 |
| BssECI | CCNNGG | 1 cut(s) | 211 |
| BssMI | GATC | 2 cut(s) | 25, 140 |
| Bst2UI | CCWGG | 1 cut(s) | 212 |
| BstC8I | GCNNGC | 2 cut(s) | 204, 208 |
| BstDEI | CTNAG | 1 cut(s) | 120 |
| BstKTI | GATC | 2 cut(s) | 28, 143 |
| BstMAI | GTCTC | 1 cut(s) | 258 |
| BstMBI | GATC | 2 cut(s) | 25, 140 |
| BstNI | CCWGG | 1 cut(s) | 212 |
| BstNSI | RCATGY | 1 cut(s) | 210 |
| BstSCI | CCNGG | 1 cut(s) | 210 |
| BstX2I | RGATCY | 1 cut(s) | 140 |
| BstYI | RGATCY | 1 cut(s) | 140 |
| Bsu36I | CCTNAGG | 1 cut(s) | 120 |
| Cac8I | GCNNGC | 2 cut(s) | 204, 208 |
| CviAII | CATG | 1 cut(s) | 207 |
| CviJI | RGCY | 2 cut(s) | 5, 178 |
| CviKI_1 | RGCY | 2 cut(s) | 5, 178 |
| DdeI | CTNAG | 1 cut(s) | 120 |
| DpnI | GATC | 2 cut(s) | 27, 142 |
| DpnII | GATC | 2 cut(s) | 25, 140 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 190 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 190 |
| EciI | GGCGGA | 1 cut(s) | 252 |
| Eco31I | GGTCTC | 1 cut(s) | 258 |
| Eco81I | CCTNAGG | 1 cut(s) | 120 |
| EcoRII | CCWGG | 1 cut(s) | 210 |
| FaeI | CATG | 1 cut(s) | 210 |
| FaiI | YATR | 5 cut(s) | 65, 134, 208, 279, 295 |
| FatI | CATG | 1 cut(s) | 206 |
| FauI | CCCGC | 1 cut(s) | 195 |
| Hin1II | CATG | 1 cut(s) | 210 |
| HphI | GGTGA | 1 cut(s) | 295 |
| Hpy188I | TCNGA | 1 cut(s) | 140 |
| Hpy188III | TCNNGA | 1 cut(s) | 181 |
| HpyF3I | CTNAG | 1 cut(s) | 120 |
| Hsp92II | CATG | 1 cut(s) | 210 |
| Kzo9I | GATC | 2 cut(s) | 25, 140 |
| LmnI | GCTCC | 1 cut(s) | 290 |
| LpnPI | CCDG | 4 cut(s) | 132, 188, 197, 224 |
| MalI | GATC | 2 cut(s) | 27, 142 |
| MboI | GATC | 2 cut(s) | 25, 140 |
| MflI | RGATCY | 1 cut(s) | 140 |
| MluCI | AATT | 1 cut(s) | 41 |
| MmeI | TCCRAC | 3 cut(s) | 63, 85, 118 |
| MnlI | CCTC | 7 cut(s) | 9, 70, 79, 115, 154, 267, 270 |
| MspR9I | CCNGG | 1 cut(s) | 212 |
| Mva1269I | GAATGC | 1 cut(s) | 240 |
| MvaI | CCWGG | 1 cut(s) | 212 |
| NdeII | GATC | 2 cut(s) | 25, 140 |
| NlaIII | CATG | 1 cut(s) | 210 |
| NlaIV | GGNNCC | 1 cut(s) | 142 |
| NspI | RCATGY | 1 cut(s) | 210 |
| PaeI | GCATGC | 1 cut(s) | 210 |
| PctI | GAATGC | 1 cut(s) | 240 |
| Psp6I | CCWGG | 1 cut(s) | 210 |
| PspGI | CCWGG | 1 cut(s) | 210 |
| PspN4I | GGNNCC | 1 cut(s) | 142 |
| PsuI | RGATCY | 1 cut(s) | 140 |
| Sau3AI | GATC | 2 cut(s) | 25, 140 |
| ScrFI | CCNGG | 1 cut(s) | 212 |
| SetI | ASST | 5 cut(s) | 81, 121, 126, 167, 180 |
| SmlI | CTYRAG | 1 cut(s) | 179 |
| SmoI | CTYRAG | 1 cut(s) | 179 |
| SphI | GCATGC | 1 cut(s) | 210 |
| Sse9I | AATT | 1 cut(s) | 41 |
| SsiI | CCGC | 3 cut(s) | 202, 238, 263 |
| StyD4I | CCNGG | 1 cut(s) | 210 |
| TaqI | TCGA | 1 cut(s) | 14 |
| TaqII | GACCGA | 1 cut(s) | 200 |
| TasI | AATT | 1 cut(s) | 41 |
| XapI | RAATTY | 1 cut(s) | 41 |
| XceI | RCATGY | 1 cut(s) | 210 |