Eukaryotic family of unknown function (DUF1754)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16810 AT1G16810 AT1G16810 |
| fragaria_vesca | FvH4_2g30690 FvH4_6g37010 FvH4_6g37010 |
| malus_domestica | MD09G1165100.v1.1 MD15G1110000.v1.1 |
| prunus_persica | Prupe.1G462200_v2.0.a1 Prupe.3G022600_v2.0.a1 Prupe.3G022600_v2.0.a1 |
| pyrus_communis | pycom09g08240 pycom15g10010 |
| rosa_chinensis | RchiOBHm_Chr2g0149551 RchiOBHm_Chr6g0312211 |
| rosa_laevigata | RLG00000008248 RLG00000009118 RLG00000010342 RLG00000020419 |
| rosa_multiflora | Rmu_sc0006867.1_g000014 Rmu_sc0010924.1_g000005 Rmu_sc0023979.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00098020 Rroxscaffold_3G00254310 Rroxscaffold_7G00156950 Rroxscaffold_7G00195390 |
| rosa_rugosa | Rorug02G0412100 Rorug02G0412100 Rorug02G0412200 Rorug02G0412300 |
| rosa_samantha | Rh2AG472700 Rh2BG484700 Rh2CG458600 Rh2DG493900 Rh6AG511000 Rh6BG522000 Rh6DG513200 |
| rosa_wichuraiana | Rw2G038530 Rw6G044440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 264 |
| AciI | CCGC | 1 cut(s) | 188 |
| AclWI | GGATC | 1 cut(s) | 80 |
| AcoI | YGGCCR | 1 cut(s) | 246 |
| AcsI | RAATTY | 1 cut(s) | 278 |
| AcuI | CTGAAG | 1 cut(s) | 56 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 329 |
| AgsI | TTSAA | 4 cut(s) | 58, 152, 224, 283 |
| AjnI | CCWGG | 1 cut(s) | 334 |
| AluBI | AGCT | 3 cut(s) | 34, 40, 227 |
| AluI | AGCT | 3 cut(s) | 34, 40, 227 |
| AlwI | GGATC | 1 cut(s) | 80 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 292 |
| Ama87I | CYCGRG | 1 cut(s) | 203 |
| AoxI | GGCC | 2 cut(s) | 246, 331 |
| ApoI | RAATTY | 1 cut(s) | 278 |
| AspS9I | GGNCC | 1 cut(s) | 332 |
| AsuHPI | GGTGA | 1 cut(s) | 34 |
| AvaI | CYCGRG | 1 cut(s) | 203 |
| BalI | TGGCCA | 1 cut(s) | 248 |
| BbsI | GAAGAC | 1 cut(s) | 92 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 248, 282 |
| BciT130I | CCWGG | 1 cut(s) | 336 |
| BclI | TGATCA | 1 cut(s) | 172 |
| BfaI | CTAG | 1 cut(s) | 128 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 245 |
| Bme1390I | CCNGG | 1 cut(s) | 336 |
| BmeT110I | CYCGRG | 1 cut(s) | 203 |
| BmgT120I | GGNCC | 1 cut(s) | 332 |
| BmrFI | CCNGG | 1 cut(s) | 336 |
| BmsI | GCATC | 2 cut(s) | 131, 268 |
| BpiI | GAAGAC | 1 cut(s) | 92 |
| BpmI | CTGGAG | 1 cut(s) | 183 |
| BsaJI | CCNNGG | 2 cut(s) | 156, 334 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 329 |
| Bse118I | RCCGGY | 1 cut(s) | 184 |
| BseBI | CCWGG | 1 cut(s) | 336 |
| BseDI | CCNNGG | 2 cut(s) | 156, 334 |
| BseGI | GGATG | 2 cut(s) | 146, 318 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 329 |
| BseMII | CTCAG | 1 cut(s) | 297 |
| Bsh1236I | CGCG | 1 cut(s) | 264 |
| Bsh1285I | CGRYCG | 1 cut(s) | 268 |
| BshFI | GGCC | 2 cut(s) | 248, 333 |
| BsiEI | CGRYCG | 1 cut(s) | 268 |
| BsiHKCI | CYCGRG | 1 cut(s) | 203 |
| BsiSI | CCGG | 1 cut(s) | 185 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 329 |
| BsnI | GGCC | 2 cut(s) | 248, 333 |
| BsoBI | CYCGRG | 1 cut(s) | 203 |
| Bsp143I | GATC | 3 cut(s) | 72, 172, 265 |
| Bsp68I | TCGCGA | 1 cut(s) | 264 |
| BspACI | CCGC | 1 cut(s) | 188 |
| BspANI | GGCC | 2 cut(s) | 248, 333 |
| BspCNI | CTCAG | 1 cut(s) | 298 |
| BspFNI | CGCG | 1 cut(s) | 264 |
| BspPI | GGATC | 1 cut(s) | 80 |
| BsrFI | RCCGGY | 1 cut(s) | 184 |
| BssAI | RCCGGY | 1 cut(s) | 184 |
| BssECI | CCNNGG | 2 cut(s) | 156, 334 |
| BssMI | GATC | 3 cut(s) | 72, 172, 265 |
| BssT1I | CCWWGG | 1 cut(s) | 156 |
| Bst2UI | CCWGG | 1 cut(s) | 336 |
| Bst6I | CTCTTC | 1 cut(s) | 129 |
| BstC8I | GCNNGC | 2 cut(s) | 210, 237 |
| BstDEI | CTNAG | 1 cut(s) | 306 |
| BstF5I | GGATG | 2 cut(s) | 146, 318 |
| BstFNI | CGCG | 1 cut(s) | 264 |
| BstKTI | GATC | 3 cut(s) | 75, 175, 268 |
| BstMBI | GATC | 3 cut(s) | 72, 172, 265 |
| BstMCI | CGRYCG | 1 cut(s) | 268 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 245 |
| BstNI | CCWGG | 1 cut(s) | 336 |
| BstSCI | CCNGG | 1 cut(s) | 334 |
| BstUI | CGCG | 1 cut(s) | 264 |
| BstV2I | GAAGAC | 1 cut(s) | 92 |
| BsuRI | GGCC | 2 cut(s) | 248, 333 |
| BtgZI | GCGATG | 1 cut(s) | 245 |
| BtsCI | GGATG | 2 cut(s) | 146, 318 |
| BtuMI | TCGCGA | 1 cut(s) | 264 |
| Cac8I | GCNNGC | 2 cut(s) | 210, 237 |
| CaiI | CAGNNNCTG | 1 cut(s) | 292 |
| Cfr10I | RCCGGY | 1 cut(s) | 184 |
| Cfr13I | GGNCC | 1 cut(s) | 332 |
| DdeI | CTNAG | 1 cut(s) | 306 |
| DpnI | GATC | 3 cut(s) | 74, 174, 267 |
| DpnII | GATC | 3 cut(s) | 72, 172, 265 |
| EaeI | YGGCCR | 1 cut(s) | 246 |
| Eam1104I | CTCTTC | 1 cut(s) | 129 |
| EarI | CTCTTC | 1 cut(s) | 129 |
| EciI | GGCGGA | 1 cut(s) | 203 |
| Eco130I | CCWWGG | 1 cut(s) | 156 |
| Eco32I | GATATC | 1 cut(s) | 200 |
| Eco57I | CTGAAG | 1 cut(s) | 56 |
| Eco88I | CYCGRG | 1 cut(s) | 203 |
| EcoO109I | RGGNCCY | 1 cut(s) | 332 |
| EcoRI | GAATTC | 1 cut(s) | 278 |
| EcoRII | CCWGG | 1 cut(s) | 334 |
| EcoRV | GATATC | 1 cut(s) | 200 |
| EcoT14I | CCWWGG | 1 cut(s) | 156 |
| ErhI | CCWWGG | 1 cut(s) | 156 |
| FaiI | YATR | 1 cut(s) | 114 |
| FbaI | TGATCA | 1 cut(s) | 172 |
| FokI | GGATG | 2 cut(s) | 153, 305 |
| FspBI | CTAG | 1 cut(s) | 128 |
| GsuI | CTGGAG | 1 cut(s) | 183 |
| HaeIII | GGCC | 2 cut(s) | 248, 333 |
| HapII | CCGG | 1 cut(s) | 185 |
| HinfI | GANTC | 1 cut(s) | 152 |
| HpaII | CCGG | 1 cut(s) | 185 |
| HphI | GGTGA | 1 cut(s) | 34 |
| Hpy188I | TCNGA | 1 cut(s) | 177 |
| Hpy188III | TCNNGA | 3 cut(s) | 203, 263, 275 |
| HpyCH4IV | ACGT | 2 cut(s) | 18, 60 |
| HpyCH4V | TGCA | 1 cut(s) | 144 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 245 |
| HpyF3I | CTNAG | 1 cut(s) | 306 |
| HpySE526I | ACGT | 2 cut(s) | 18, 60 |
| Ksp22I | TGATCA | 1 cut(s) | 172 |
| Kzo9I | GATC | 3 cut(s) | 72, 172, 265 |
| LpnPI | CCDG | 6 cut(s) | 147, 194, 198, 260, 278, 321 |
| LweI | GCATC | 2 cut(s) | 131, 268 |
| MaeI | CTAG | 1 cut(s) | 128 |
| MaeII | ACGT | 2 cut(s) | 18, 60 |
| MalI | GATC | 3 cut(s) | 74, 174, 267 |
| MboI | GATC | 3 cut(s) | 72, 172, 265 |
| MboII | GAAGA | 3 cut(s) | 94, 97, 116 |
| MfeI | CAATTG | 1 cut(s) | 147 |
| MlsI | TGGCCA | 1 cut(s) | 248 |
| MluCI | AATT | 2 cut(s) | 147, 278 |
| MluNI | TGGCCA | 1 cut(s) | 248 |
| MnlI | CCTC | 3 cut(s) | 142, 186, 210 |
| Mox20I | TGGCCA | 1 cut(s) | 248 |
| MscI | TGGCCA | 1 cut(s) | 248 |
| MseI | TTAA | 1 cut(s) | 340 |
| Msp20I | TGGCCA | 1 cut(s) | 248 |
| MspI | CCGG | 1 cut(s) | 185 |
| MspR9I | CCNGG | 1 cut(s) | 336 |
| MunI | CAATTG | 1 cut(s) | 147 |
| MvaI | CCWGG | 1 cut(s) | 336 |
| MvnI | CGCG | 1 cut(s) | 264 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 245 |
| NdeII | GATC | 3 cut(s) | 72, 172, 265 |
| NruI | TCGCGA | 1 cut(s) | 264 |
| PaeR7I | CTCGAG | 1 cut(s) | 203 |
| PfeI | GAWTC | 1 cut(s) | 152 |
| Ple19I | CGATCG | 1 cut(s) | 268 |
| Psp6I | CCWGG | 1 cut(s) | 334 |
| PspGI | CCWGG | 1 cut(s) | 334 |
| PspPI | GGNCC | 1 cut(s) | 332 |
| PstNI | CAGNNNCTG | 1 cut(s) | 292 |
| PvuI | CGATCG | 1 cut(s) | 268 |
| RruI | TCGCGA | 1 cut(s) | 264 |
| SaqAI | TTAA | 1 cut(s) | 340 |
| Sau3AI | GATC | 3 cut(s) | 72, 172, 265 |
| Sau96I | GGNCC | 1 cut(s) | 332 |
| ScrFI | CCNGG | 1 cut(s) | 336 |
| SetI | ASST | 7 cut(s) | 21, 36, 42, 63, 70, 229, 303 |
| SfaNI | GCATC | 2 cut(s) | 131, 268 |
| Sfr274I | CTCGAG | 1 cut(s) | 203 |
| SgrAI | CRCCGGYG | 1 cut(s) | 184 |
| SlaI | CTCGAG | 1 cut(s) | 203 |
| SmlI | CTYRAG | 1 cut(s) | 203 |
| SmoI | CTYRAG | 1 cut(s) | 203 |
| Sse9I | AATT | 2 cut(s) | 147, 278 |
| SsiI | CCGC | 1 cut(s) | 188 |
| SspMI | CTAG | 1 cut(s) | 128 |
| StyD4I | CCNGG | 1 cut(s) | 334 |
| StyI | CCWWGG | 1 cut(s) | 156 |
| TaiI | ACGT | 2 cut(s) | 21, 63 |
| TaqI | TCGA | 1 cut(s) | 204 |
| TasI | AATT | 2 cut(s) | 147, 278 |
| TfiI | GAWTC | 1 cut(s) | 152 |
| Tru1I | TTAA | 1 cut(s) | 340 |
| Tru9I | TTAA | 1 cut(s) | 340 |
| XapI | RAATTY | 1 cut(s) | 278 |
| XhoI | CTCGAG | 1 cut(s) | 203 |
| XspI | CTAG | 1 cut(s) | 128 |