Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0002550

Physical Location & Seq

Genomic Coordinates Reverse (-)

53372105 .. 53377670

Gene Structure 5566 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0434600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGGCACTTTCTCTCAGACTACACACCCTTCTCTCCACCACTTCCAGACCCAACTTTTCATCAAATGCCACTCTCACTCCTCCAAACCCATCTCTCTCTCTCTCCTCCTCACTTCTTCCCCACCACCTACCTCTCAGAACCCCACACTCCCTTACCATCAAAGCCGCCTCTTCTCCAGCAACCGTAGCAGAGCCCAAGGGCATCAAGATTAATTTGGTTCCCACCAAACCGATCGAAGGCCAGAAGACCGGAACCAGCGGTCTCCGAAAGAAGGTGAAAGTTTTTCAGCAAGAGAATTACCTTGCCAATTGGATCCAGGCGTTATTTGATTCATTGCCACCAGAGGATTACAAGGATGGTTTACTGGTGTTGGGAGGTGATGGTCGTTACTTTAATCGTGAAGCTGCACAGATTATCATCAAAATTGCCGCAGGGAATGGTGTTGGGAAAATTTTGGTTGGCAAGGAAGGAATTTTGTCAACACCTGCTGTTTCTGCTGTTATCCGCAAGAGGAAGGCCAATGGTGGTTTTATAATGAGTGCAAGCCACAATCCTGGTGGACCTGATTATGATTGGGGTATTAAGTTTAATTACAGTAGTGGACAACCTGCACCTGAGTCCATCACTGACAAGATTTATGGAAACACTCTTTCTATCTCAGTAATAAAGATAGCAGACATCGCTGATGTTGACTTATCTTCTGTTGGAGTTATAAACTATGGAAACTTCACTGTTGAAGTTATTGATCCAGTTACTGACTATTTGGAACTAATGGAGAATGTATTTGATTTCCAGCTTATCAAAAATCTTCTGATGTTAGACTTCAGGTTTCTATTTGATGCCATGCATGCTGTTACTGGTGCTTATGCAAAACCCATCTTTGTGGATAAACTGGGAGCCACTCCGGATTCAATTTCAAATGGAGTGCCTCTAGAGGATTTTGGGCATGGTCATCCAGATCCTAATCTCACGTATGCTAAGGATCTCGTCGATGTTTTGTACAGTAAAAATGGACCCGACTTTGGAGCCGCAAGTGATGGGGATGGTGATAGAAACATGATTCTTGGTAAAGGCTTTTTTGTTACTCCTTCAGACTCTGTTGCAATTATCGCAGCCAATGCTCAAGAAGCTATTCCATATTTTCAGAGTGGCCCCAAGGGATTAGCACGGTCCATGCCAACAAGCGGTGCACTTGATCATGTTGCTGAAAAGTTAAAGCTTCCTTTCTTTGAGGTTCCCACTGGTTGGAAGTTCTTTGGGAATCTTATGGATGCTGGGAAGTTATCTATATGTGGGGAAGAGAGTTTTGGAACAGGTTCTGACCACATCCGCGAGAAGGATGGCATATGGGCTGTCTTAGCTTGGCTTTCTATCATTGCATATCGGAACAAAGACAAAAAACCTGGCGAGAAGTTGGTCTCTGTTGCAGACGTTGTGAAGGAACACTGGGCAACCTATGGAAGAAATTTCTTTTCTCGATATGACTATGAAGAATGTGCATCTGAAGGTGCCAATAAGATGATAAATCATCTTAGAGAATTAATCTCTAGGAGCAAGCCTGGTGAAAAGTTTGGAAATTATGCTCTCAAATTTGCCGATGACTTCACCTATACTGATCCTGTTGATGGAAGTGTGGCATCAAAGCAAGGTGTTCGGTTTGTTTTTACTGATGGATCGAGGATCATATATCGTTTATCAGGAACAGGTTCAGCAGGAGCAACTATTCGAATATACATTGAACAGTATGAACCAGATGTCTCCAAACATGATGAGGACGCCCAAGTGGCACTGAAACCCTTAATAGATTTGGCATTGTCTGTATCGAAGCTGAAGGAGTTCACTGGAAGGGAGAAGCCCACAGTCATCACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003002 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009753 GO:0009755 GO:0009790 GO:0009791 GO:0009793 GO:0009867 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010033 GO:0010051 GO:0010072 GO:0010154 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045892 GO:0045934 GO:0046983 GO:0048316 GO:0048367 GO:0048507 GO:0048508 GO:0048519 GO:0048523 GO:0048532 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0080090 GO:0090421 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

623

Amino Acids

67.75

Weight (kDa)

6.26

Isoelectric Point (pI)

24.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PGM_PMM_I	PF02878	81 - 217	3.6e-33	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
PGM_PMM_II	PF02879	253 - 355	3.2e-11	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PGM_PMM_III	PF02880	364 - 467	6.8e-22	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
PGM1_C_vert_fung	PF24947	488 - 620	3.4e-51	Phosphoglucomutase-1, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002550)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g33770 FvH4_7g33770 FvH4_7g33770 FvH4_7g33770 FvH4_7g33770 FvH4_7g33770 FvH4_7g33770
malus_domestica	MD01G1234100.v1.1 MD07G1306300.v1.1
prunus_persica	Prupe.2G324300_v2.0.a1
pyrus_communis	pycom01g24260 pycom07g27930
rosa_chinensis	RchiOBHm_Chr1g0382471 RchiOBHm_Chr1g0382481 RchiOBHm_Chr1g0383911
rosa_laevigata	RLG00000026087 RLG00000026174 RLG00000026177
rosa_multiflora	Rmu_sc0000110.1_g000051 Rmu_sc0003885.1_g000009 Rmu_sc0005139.1_g000028
rosa_roxburghii	Rroxscaffold_4G00277160 Rroxscaffold_4G00278020 Rroxscaffold_4G00278080
rosa_rugosa	Rorug01G0434600 Rorug01G0434900 Rorug01G0443000
rosa_samantha	Rh1AG459200 Rh1AG459300 Rh1AG459600 Rh1AG468900 Rh1BG415700 Rh1BG426600 Rh1CG429700 Rh1CG429800 Rh1CG439400 Rh1DG447800 Rh1DG447900 Rh1DG459400
rosa_wichuraiana	Rw1G040350 Rw1G041180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	533, 713
AarI	CACCTGC	1 cut(s)	493
Acc36I	ACCTGC	2 cut(s)	493, 616
AccB1I	GGYRCC	1 cut(s)	1508
AccB7I	CCANNNNNTGG	1 cut(s)	1245
AccII	CGCG	1 cut(s)	1332
AccIII	TCCGGA	1 cut(s)	904
AciI	CCGC	7 cut(s)	165, 258, 429, 505, 1029, 1185, 1330
AclWI	GGATC	8 cut(s)	307, 320, 740, 953, 990, 1610, 1681, 1688
AcsI	RAATTY	4 cut(s)	450, 471, 1465, 1589
AcuI	CTGAAG	4 cut(s)	808, 1074, 1524, 1850
AcyI	GRCGYC	1 cut(s)	1776
AfaI	GTAC	1 cut(s)	1001
AfiI	CCNNNNNNNGG	7 cut(s)	236, 271, 1022, 1184, 1245, 1336, 1625
AgsI	TTSAA	4 cut(s)	737, 912, 918, 1739
AjnI	CCWGG	4 cut(s)	315, 553, 1402, 1558
AjuI	GAANNNNNNNTTGG	2 cut(s)	1290, 1322
AluBI	AGCT	6 cut(s)	404, 796, 1130, 1219, 1361, 1828
AluI	AGCT	6 cut(s)	404, 796, 1130, 1219, 1361, 1828
Alw21I	GWGCWC	1 cut(s)	1192
Alw26I	GTCTC	3 cut(s)	266, 1423, 1762
Alw44I	GTGCAC	1 cut(s)	1188
AlwI	GGATC	8 cut(s)	307, 320, 740, 953, 990, 1610, 1681, 1688
AlwNI	CAGNNNCTG	3 cut(s)	755, 1097, 1319
Aor13HI	TCCGGA	1 cut(s)	904
AoxI	GGCC	3 cut(s)	238, 516, 1150
ApaLI	GTGCAC	1 cut(s)	1188
ApeKI	GCWGC	2 cut(s)	404, 1112
ApoI	RAATTY	4 cut(s)	450, 471, 1465, 1589
AseI	ATTAAT	2 cut(s)	210, 1541
Asp700I	GAANNNNTTC	4 cut(s)	1131, 1315, 1705, 1835
AspS9I	GGNCC	4 cut(s)	560, 1013, 1151, 1170
AsuHPI	GGTGA	5 cut(s)	286, 389, 1058, 1574, 1597
AsuII	TTCGAA	1 cut(s)	1726
AvaII	GGWCC	3 cut(s)	560, 1013, 1170
BaeGI	GKGCMC	1 cut(s)	1192
BamHI	GGATCC	1 cut(s)	312
BanI	GGYRCC	1 cut(s)	1508
BanII	GRGCYC	1 cut(s)	195
BbsI	GAAGAC	1 cut(s)	251
Bbv12I	GWGCWC	1 cut(s)	1192
BbvI	GCAGC	2 cut(s)	391, 1124
BcgI	CGANNNNNNTGC	2 cut(s)	1634, 1668
BciT130I	CCWGG	4 cut(s)	317, 555, 1404, 1560
BclI	TGATCA	1 cut(s)	1195
BcoDI	GTCTC	3 cut(s)	266, 1423, 1762
BfaI	CTAG	2 cut(s)	932, 1548
BfuAI	ACCTGC	2 cut(s)	493, 616
BglI	GCCNNNNNGGC	1 cut(s)	1784
BisI	GCNGC	5 cut(s)	165, 405, 429, 1029, 1113
BlsI	GCNGC	5 cut(s)	166, 406, 430, 1030, 1114
Bme1390I	CCNGG	4 cut(s)	317, 555, 1404, 1560
Bme18I	GGWCC	3 cut(s)	560, 1013, 1170
BmgT120I	GGNCC	4 cut(s)	560, 1013, 1151, 1170
BmiI	GGNNCC	9 cut(s)	219, 253, 314, 898, 1015, 1027, 1153, 1236, 1510
BmrFI	CCNGG	4 cut(s)	317, 555, 1404, 1560
BmrI	ACTGGG	2 cut(s)	902, 1456
BmsI	GCATC	5 cut(s)	210, 829, 1261, 1508, 1646
BmuI	ACTGGG	2 cut(s)	902, 1456
BpiI	GAAGAC	1 cut(s)	251
BpmI	CTGGAG	1 cut(s)	159
Bpu10I	CCTNAGC	1 cut(s)	978
Bpu14I	TTCGAA	1 cut(s)	1726
BpuEI	CTTGAG	1 cut(s)	1107
BsaAI	YACGTR	1 cut(s)	972
BsaBI	GATNNNNATC	2 cut(s)	416, 963
BsaHI	GRCGYC	1 cut(s)	1776
BsaI	GGTCTC	2 cut(s)	266, 1423
BsaJI	CCNNGG	2 cut(s)	195, 1155
BsaWI	WCCGGW	2 cut(s)	248, 904
BsaXI	ACNNNNNCTCC	2 cut(s)	61, 91
Bsc4I	CCNNNNNNNGG	7 cut(s)	236, 271, 1022, 1184, 1245, 1336, 1625
Bse1I	ACTGG	7 cut(s)	369, 749, 862, 897, 1246, 1451, 1846
Bse3DI	GCAATG	2 cut(s)	332, 1374
Bse8I	GATNNNNATC	2 cut(s)	416, 963
BseAI	TCCGGA	1 cut(s)	904
BseBI	CCWGG	4 cut(s)	317, 555, 1404, 1560
BseDI	CCNNGG	2 cut(s)	195, 1155
BseGI	GGATG	6 cut(s)	361, 952, 1048, 1276, 1326, 1345
BseJI	GATNNNNATC	2 cut(s)	416, 963
BseLI	CCNNNNNNNGG	7 cut(s)	236, 271, 1022, 1184, 1245, 1336, 1625
BseMI	GCAATG	2 cut(s)	332, 1374
BseMII	CTCAG	4 cut(s)	28, 148, 606, 672
BseNI	ACTGG	7 cut(s)	369, 749, 862, 897, 1246, 1451, 1846
BseRI	GAGGAG	3 cut(s)	69, 94, 97
BseSI	GKGCMC	1 cut(s)	1192
BseXI	GCAGC	2 cut(s)	391, 1124
BseYI	CCCAGC	1 cut(s)	1274
BsgI	GTGCAG	2 cut(s)	390, 594
Bsh1236I	CGCG	1 cut(s)	1332
Bsh1285I	CGRYCG	1 cut(s)	234
BshFI	GGCC	3 cut(s)	240, 518, 1152
BshNI	GGYRCC	1 cut(s)	1508
BsiEI	CGRYCG	1 cut(s)	234
BsiHKAI	GWGCWC	1 cut(s)	1192
BsiSI	CCGG	2 cut(s)	249, 905
BslI	CCNNNNNNNGG	7 cut(s)	236, 271, 1022, 1184, 1245, 1336, 1625
BsmAI	GTCTC	3 cut(s)	266, 1423, 1762
BsnI	GGCC	3 cut(s)	240, 518, 1152
Bso31I	GGTCTC	2 cut(s)	266, 1423
Bsp119I	TTCGAA	1 cut(s)	1726
Bsp1286I	GDGCHC	2 cut(s)	195, 1192
Bsp13I	TCCGGA	1 cut(s)	904
Bsp1407I	TGTACA	1 cut(s)	999
Bsp143I	GATC	9 cut(s)	231, 312, 745, 958, 982, 1195, 1615, 1673, 1680
BspACI	CCGC	7 cut(s)	165, 258, 429, 505, 1029, 1185, 1330
BspANI	GGCC	3 cut(s)	240, 518, 1152
BspCNI	CTCAG	4 cut(s)	27, 147, 607, 671
BspEI	TCCGGA	1 cut(s)	904
BspFNI	CGCG	1 cut(s)	1332
BspLI	GGNNCC	9 cut(s)	219, 253, 314, 898, 1015, 1027, 1153, 1236, 1510
BspMI	ACCTGC	2 cut(s)	493, 616
BspPI	GGATC	8 cut(s)	307, 320, 740, 953, 990, 1610, 1681, 1688
BspT104I	TTCGAA	1 cut(s)	1726
BspT107I	GGYRCC	1 cut(s)	1508
BspTNI	GGTCTC	2 cut(s)	266, 1423
BsrDI	GCAATG	2 cut(s)	332, 1374
BsrGI	TGTACA	1 cut(s)	999
BsrI	ACTGG	7 cut(s)	369, 749, 862, 897, 1246, 1451, 1846
BssECI	CCNNGG	2 cut(s)	195, 1155
BssMI	GATC	9 cut(s)	231, 312, 745, 958, 982, 1195, 1615, 1673, 1680
BssNI	GRCGYC	1 cut(s)	1776
BssT1I	CCWWGG	2 cut(s)	195, 1155
Bst2UI	CCWGG	4 cut(s)	317, 555, 1404, 1560
Bst4CI	ACNGT	7 cut(s)	184, 596, 733, 1004, 1170, 1743, 1861
Bst6I	CTCTTC	2 cut(s)	175, 1293
BstACI	GRCGYC	1 cut(s)	1776
BstAPI	GCANNNNNTGC	1 cut(s)	1118
BstAUI	TGTACA	1 cut(s)	999
BstBAI	YACGTR	1 cut(s)	972
BstBI	TTCGAA	1 cut(s)	1726
BstC8I	GCNNGC	3 cut(s)	544, 849, 1556
BstDEI	CTNAG	7 cut(s)	14, 134, 615, 658, 978, 1357, 1532
BstF5I	GGATG	6 cut(s)	361, 952, 1048, 1276, 1326, 1345
BstFNI	CGCG	1 cut(s)	1332
BstKTI	GATC	9 cut(s)	234, 315, 748, 961, 985, 1198, 1618, 1676, 1683
BstMAI	GTCTC	3 cut(s)	266, 1423, 1762
BstMBI	GATC	9 cut(s)	231, 312, 745, 958, 982, 1195, 1615, 1673, 1680
BstMCI	CGRYCG	1 cut(s)	234
BstMWI	GCNNNNNNNGC	9 cut(s)	185, 494, 680, 848, 1109, 1118, 1127, 1358, 1784
BstNI	CCWGG	4 cut(s)	317, 555, 1404, 1560
BstNSI	RCATGY	1 cut(s)	851
BstSCI	CCNGG	4 cut(s)	315, 553, 1402, 1558
BstSLI	GKGCMC	1 cut(s)	1192
BstUI	CGCG	1 cut(s)	1332
BstV1I	GCAGC	2 cut(s)	391, 1124
BstV2I	GAAGAC	1 cut(s)	251
BstX2I	RGATCY	3 cut(s)	312, 958, 982
BstXI	CCANNNNNNTGG	2 cut(s)	554, 883
BstYI	RGATCY	3 cut(s)	312, 958, 982
BsuRI	GGCC	3 cut(s)	240, 518, 1152
BtgZI	GCGATG	1 cut(s)	664
BtsCI	GGATG	6 cut(s)	361, 952, 1048, 1276, 1326, 1345
BtsIMutI	CAGTG	6 cut(s)	624, 729, 1239, 1444, 1787, 1839
BveI	ACCTGC	2 cut(s)	493, 616
Cac8I	GCNNGC	3 cut(s)	544, 849, 1556
CaiI	CAGNNNCTG	3 cut(s)	755, 1097, 1319
Cfr13I	GGNCC	4 cut(s)	560, 1013, 1151, 1170
CseI	GACGC	1 cut(s)	1784
Csp6I	GTAC	1 cut(s)	1000
CspCI	CAANNNNNGTGG	2 cut(s)	538, 573
CviAII	CATG	7 cut(s)	844, 848, 947, 1057, 1174, 1199, 1766
CviQI	GTAC	1 cut(s)	1000
DdeI	CTNAG	7 cut(s)	14, 134, 615, 658, 978, 1357, 1532
DpnI	GATC	9 cut(s)	233, 314, 747, 960, 984, 1197, 1617, 1675, 1682
DpnII	GATC	9 cut(s)	231, 312, 745, 958, 982, 1195, 1615, 1673, 1680
Eam1104I	CTCTTC	2 cut(s)	175, 1293
EarI	CTCTTC	2 cut(s)	175, 1293
Eco130I	CCWWGG	2 cut(s)	195, 1155
Eco24I	GRGCYC	1 cut(s)	195
Eco31I	GGTCTC	2 cut(s)	266, 1423
Eco47I	GGWCC	3 cut(s)	560, 1013, 1170
Eco57I	CTGAAG	4 cut(s)	808, 1074, 1524, 1850
EcoRII	CCWGG	4 cut(s)	315, 553, 1402, 1558
EcoT14I	CCWWGG	2 cut(s)	195, 1155
EcoT22I	ATGCAT	1 cut(s)	849
EcoT38I	GRGCYC	1 cut(s)	195
ErhI	CCWWGG	2 cut(s)	195, 1155
FaeI	CATG	7 cut(s)	847, 851, 950, 1060, 1177, 1202, 1769
FatI	CATG	7 cut(s)	843, 847, 946, 1056, 1173, 1198, 1765
FauNDI	CATATG	1 cut(s)	1346
FbaI	TGATCA	1 cut(s)	1195
Fnu4HI	GCNGC	5 cut(s)	165, 405, 429, 1029, 1113
FokI	GGATG	6 cut(s)	368, 939, 1055, 1283, 1313, 1352
FriOI	GRGCYC	1 cut(s)	195
Fsp4HI	GCNGC	5 cut(s)	165, 405, 429, 1029, 1113
FspBI	CTAG	2 cut(s)	932, 1548
GluI	GCNGC	5 cut(s)	165, 405, 429, 1029, 1113
GsaI	CCCAGC	1 cut(s)	1278
GsuI	CTGGAG	1 cut(s)	159
HaeIII	GGCC	3 cut(s)	240, 518, 1152
HapII	CCGG	2 cut(s)	249, 905
HgaI	GACGC	1 cut(s)	1784
Hin1I	GRCGYC	1 cut(s)	1776
Hin1II	CATG	7 cut(s)	847, 851, 950, 1060, 1177, 1202, 1769
HincII	GTYRAC	2 cut(s)	480, 691
HindII	GTYRAC	2 cut(s)	480, 691
HindIII	AAGCTT	1 cut(s)	1217
HinfI	GANTC	6 cut(s)	329, 617, 908, 1060, 1094, 1261
HpaII	CCGG	2 cut(s)	249, 905
HphI	GGTGA	5 cut(s)	286, 389, 1058, 1574, 1597
Hpy166II	GTNNAC	7 cut(s)	362, 480, 560, 602, 691, 1190, 1839
Hpy188I	TCNGA	9 cut(s)	17, 137, 266, 813, 1093, 1146, 1321, 1386, 1504
Hpy188III	TCNNGA	9 cut(s)	45, 205, 398, 905, 932, 956, 1124, 1476, 1698
Hpy8I	GTNNAC	7 cut(s)	362, 480, 560, 602, 691, 1190, 1839
Hpy99I	CGWCG	1 cut(s)	992
HpyCH4III	ACNGT	7 cut(s)	184, 596, 733, 1004, 1170, 1743, 1861
HpyCH4IV	ACGT	2 cut(s)	971, 1431
HpyF10VI	GCNNNNNNNGC	9 cut(s)	185, 494, 680, 848, 1109, 1118, 1127, 1358, 1784
HpyF3I	CTNAG	7 cut(s)	14, 134, 615, 658, 978, 1357, 1532
HpySE526I	ACGT	2 cut(s)	971, 1431
Hsp92I	GRCGYC	1 cut(s)	1776
Hsp92II	CATG	7 cut(s)	847, 851, 950, 1060, 1177, 1202, 1769
Kpn2I	TCCGGA	1 cut(s)	904
Ksp22I	TGATCA	1 cut(s)	1195
Kzo9I	GATC	9 cut(s)	231, 312, 745, 958, 982, 1195, 1615, 1673, 1680
LmnI	GCTCC	4 cut(s)	896, 1025, 1551, 1715
Lsp1109I	GCAGC	2 cut(s)	391, 1124
LweI	GCATC	5 cut(s)	210, 829, 1261, 1508, 1646
MaeI	CTAG	2 cut(s)	932, 1548
MaeII	ACGT	2 cut(s)	971, 1431
MaeIII	GTNAC	4 cut(s)	386, 751, 853, 1081
MalI	GATC	9 cut(s)	233, 314, 747, 960, 984, 1197, 1617, 1675, 1682
MboI	GATC	9 cut(s)	231, 312, 745, 958, 982, 1195, 1615, 1673, 1680
MboII	GAAGA	8 cut(s)	107, 162, 256, 690, 800, 1310, 1473, 1502
MfeI	CAATTG	1 cut(s)	307
MflI	RGATCY	3 cut(s)	312, 958, 982
MhlI	GDGCHC	2 cut(s)	195, 1192
MlyI	GAGTC	2 cut(s)	626, 1088
MmeI	TCCRAC	2 cut(s)	685, 1226
Mph1103I	ATGCAT	1 cut(s)	849
MroI	TCCGGA	1 cut(s)	904
MroXI	GAANNNNTTC	4 cut(s)	1131, 1315, 1705, 1835
MseI	TTAA	7 cut(s)	210, 393, 582, 588, 1214, 1541, 1799
MslI	CAYNNNNRTG	1 cut(s)	881
MspA1I	CMGCKG	1 cut(s)	258
MspI	CCGG	2 cut(s)	249, 905
MspR9I	CCNGG	4 cut(s)	317, 555, 1404, 1560
MunI	CAATTG	1 cut(s)	307
MvaI	CCWGG	4 cut(s)	317, 555, 1404, 1560
MvnI	CGCG	1 cut(s)	1332
MwoI	GCNNNNNNNGC	9 cut(s)	185, 494, 680, 848, 1109, 1118, 1127, 1358, 1784
NdeI	CATATG	1 cut(s)	1346
NdeII	GATC	9 cut(s)	231, 312, 745, 958, 982, 1195, 1615, 1673, 1680
NlaIII	CATG	7 cut(s)	847, 851, 950, 1060, 1177, 1202, 1769
NlaIV	GGNNCC	9 cut(s)	219, 253, 314, 898, 1015, 1027, 1153, 1236, 1510
NsiI	ATGCAT	1 cut(s)	849
NspI	RCATGY	1 cut(s)	851
NspV	TTCGAA	1 cut(s)	1726
PaeI	GCATGC	1 cut(s)	851
PaqCI	CACCTGC	1 cut(s)	493
PdmI	GAANNNNTTC	4 cut(s)	1131, 1315, 1705, 1835
PfeI	GAWTC	4 cut(s)	329, 908, 1060, 1261
PflMI	CCANNNNNTGG	1 cut(s)	1245
PkrI	GCNGC	5 cut(s)	166, 406, 430, 1030, 1114
Ple19I	CGATCG	1 cut(s)	234
PleI	GAGTC	2 cut(s)	625, 1088
PpsI	GAGTC	2 cut(s)	625, 1088
Ppu21I	YACGTR	1 cut(s)	972
PshBI	ATTAAT	2 cut(s)	210, 1541
PsiI	TTATAA	2 cut(s)	533, 713
Psp6I	CCWGG	4 cut(s)	315, 553, 1402, 1558
PspFI	CCCAGC	1 cut(s)	1274
PspGI	CCWGG	4 cut(s)	315, 553, 1402, 1558
PspN4I	GGNNCC	9 cut(s)	219, 253, 314, 898, 1015, 1027, 1153, 1236, 1510
PspPI	GGNCC	4 cut(s)	560, 1013, 1151, 1170
PstNI	CAGNNNCTG	3 cut(s)	755, 1097, 1319
PsuI	RGATCY	3 cut(s)	312, 958, 982
PvuI	CGATCG	1 cut(s)	234
RsaI	GTAC	1 cut(s)	1001
RsaNI	GTAC	1 cut(s)	1000
RseI	CAYNNNNRTG	1 cut(s)	881
SaqAI	TTAA	7 cut(s)	210, 393, 582, 588, 1214, 1541, 1799
SatI	GCNGC	5 cut(s)	165, 405, 429, 1029, 1113
Sau3AI	GATC	9 cut(s)	231, 312, 745, 958, 982, 1195, 1615, 1673, 1680
Sau96I	GGNCC	4 cut(s)	560, 1013, 1151, 1170
SchI	GAGTC	2 cut(s)	626, 1088
ScrFI	CCNGG	4 cut(s)	317, 555, 1404, 1560
SduI	GDGCHC	2 cut(s)	195, 1192
SfaNI	GCATC	5 cut(s)	210, 829, 1261, 1508, 1646
SfuI	TTCGAA	1 cut(s)	1726
SinI	GGWCC	3 cut(s)	560, 1013, 1170
SmiMI	CAYNNNNRTG	1 cut(s)	881
SmlI	CTYRAG	1 cut(s)	1122
SmoI	CTYRAG	1 cut(s)	1122
SphI	GCATGC	1 cut(s)	851
SsiI	CCGC	7 cut(s)	165, 258, 429, 505, 1029, 1185, 1330
SspMI	CTAG	2 cut(s)	932, 1548
StyD4I	CCNGG	4 cut(s)	315, 553, 1402, 1558
StyI	CCWWGG	2 cut(s)	195, 1155
TaaI	ACNGT	7 cut(s)	184, 596, 733, 1004, 1170, 1743, 1861
TaiI	ACGT	2 cut(s)	974, 1434
TaqI	TCGA	6 cut(s)	234, 990, 1477, 1676, 1726, 1823
TatI	WGTACW	1 cut(s)	999
TauI	GCSGC	3 cut(s)	167, 431, 1031
TfiI	GAWTC	4 cut(s)	329, 908, 1060, 1261
Tru1I	TTAA	7 cut(s)	210, 393, 582, 588, 1214, 1541, 1799
Tru9I	TTAA	7 cut(s)	210, 393, 582, 588, 1214, 1541, 1799
TscAI	CASTG	6 cut(s)	631, 736, 1246, 1451, 1794, 1846
TseI	GCWGC	2 cut(s)	404, 1112
TspDTI	ATGAA	4 cut(s)	48, 321, 1503, 1761
TspRI	CASTG	6 cut(s)	631, 736, 1246, 1451, 1794, 1846
Van91I	CCANNNNNTGG	1 cut(s)	1245
VneI	GTGCAC	1 cut(s)	1188
VpaK11BI	GGWCC	3 cut(s)	560, 1013, 1170
VspI	ATTAAT	2 cut(s)	210, 1541
XapI	RAATTY	4 cut(s)	450, 471, 1465, 1589
XbaI	TCTAGA	1 cut(s)	931
XceI	RCATGY	1 cut(s)	851
XcmI	CCANNNNNNNNNTGG	1 cut(s)	554
XmnI	GAANNNNTTC	4 cut(s)	1131, 1315, 1705, 1835
XspI	CTAG	2 cut(s)	932, 1548
Zsp2I	ATGCAT	1 cut(s)	849

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.