Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001660

Physical Location & Seq

Genomic Coordinates Forward (+)

47473123 .. 47480915

Gene Structure 7793 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0372400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2334 bp

ATGAATCTCTACGCTCACGACCTCTCTCTCCTCGACTTCAACTTCAACTTGTCCGATCCCATTTCCGATCCCTTCTCCCACCGCACCACTTCTTTCTTTTCCGAAACTGCCCCTACTGACGACGACGGCGGCGACGCCTCTGATGGCAGGGGCAGGAACAGAACCAACGGTAAGCGCGTGGAGCGCAGTCCCAGCCCTCCCAAGTACCGCCACGACGGCACCTCGCCTCTCCCTCTCGGAATGGATTGGAGCCCTCCGCCTCGCAAATGGGATGGACGGGACTCTGTTTGGCCACATAATCCTCGTACAGGATGGAGTTACTGCGTCACAGTTCCTTCTTGGACTTACCTGCCCAAACCGAGAGGTTCAGATCCTGTGGTGTTTTATAGGGTTCAAGTTGGTCTACAATCACCGGAAGGAATCACAACCACTCGAGGGATATTACGAAGATTTAATGATTTTCTAAAGCTATTTTCTGAACTTAAAAAGGCATTCCCCCTGAAAGATCTTCCTCCAGCTCCTCCAAAGGGGTTTCTGAGAATGAAAAGTCGGATACTATTGGAAGAGCGAAGGTGTTCTTTGGAGGATTGGATAGAAAAGCTATTGTCAGATATCGATATATCAAGAAGTTTGTTGGTTGCAACCTTTCTAGAGCTGGAAGCTGCTGCGAGGTCTTCATTCAATGATCCGCAGCTAATTTCAGATGTAAACTCAACAAGTGGCACAGCTCCGTCTTCTCTGTTACAAACCCAATCAGATCTCTCTGTTGTTGCTGGTAGCTCATCTGTCACATCAGATAATGGTAATGATACTCCATACGAGGTATCTGAGCTTGGAACACCAAGGTATGGAGATGATAGCCGTGCTAATCTTGCCATGGAGTATTCGACATCTGATCAGGACTTAGATGATTCGATAGATACATCTGTTAAGGTTGGCCTATTTAACCAGAAATTTATTCGGGGAAGCCTAGAAAGGCTCTCCAGGCGCCAAATTTCCGGTAGAAGTAATGTGAATACTATAGACAAGGAGCAAACAAGTGAAAATACCTATGGTTCTAAACCTCTTTGCATGGATGGAACCGAGTTCTTTGTAGAACATGAGGAAAGGAAGAGGGATGGCCATGCTCGAAGACCATCAACAGAGAGTTTTGGAAGCGATACTTCTACCTTGCGGGTGGGCAATTTATATGGTGATGGCTCCCTCAACCTTCCTGAAAGTTCTGAAGCTCCTACAATTGCAGATACTTTTGACAACTCAAATTTGAAGTTTTCAAGGGCTATACTAGCTGCTTTTCCACATGATGAGCGACAAAAATTAAACAGAGTTCTGATTACATTGCAGCAGAGATTAGGAACAGCAAAAATTGACATCGAGGATCTTATAGCAAGATTGAATCAAGAAGTTGCTGTGAGACAATTCCTCACAACAAAGGTTAAAGATCTGGAAGTGGAACTTGAAACTACCCAACAAAATTGTAAAGAAAATATTCAGCAGGCTGTCTTAAATGAAAAAGAAAGATTTACCCAAATGCAGTGGGATATGGAGGAACTGCGAAGGAAGTGCTTGGACCTGGAATTACAATTGAGATCTGAGCAGGATGCAAGGGAGCATTCGGAGTCAACCAAAATTTCTATCATTCAGGAGAATGACATATTGCTACAGGAGTTGGATGTCTCTAGGCGGCAGCTTGACAACTTGCAGAAATTTCATGAAGAGTTTGAGGTGAAATCAAAGACAGATGTAAAGCTACTTGTTAAAGAGGTCAAATCTCTTCGAAATTCACAATCAGAACTGAAGCAGGAACTCAGTCGATTGATGAAGGAAAAATTAGAAGTAGAGAGAACACTTCAAAAAGAAAAGCGAAGAATAGAGTGTGCAGCAACTACTAATGCAAAGCTGCTGCATGAATGTGAAATACTTCGCAGTCGGCTTCAAGAATGTAGTGTCAATTTTCTGGTTGAAGAGGAAGATAAACTGATCTTGGATACTTCATCACCATCTGATGCTATTGATCTACTGACAACGTCTGACAATCGAATTGGTCTTCTTCTTGCGGAGGCACAGCTCCTTGCACAGGATGTCGAAAGTGCTGTTATAGCAGTGGACGACGCTCAAGACATCAAGGGTGGTGATAGGATGGCTGATGATGAGTTGAGGAAGATGCTGACAGATCAGTTTGTTGACAATGCCAGACTAAGAATGCAGGTCAATTCAGTAATCCGTTGTGCTCTAAATGCAAATATTAAAGATGAAAATGATGATGATGATGATGATGATGATGAAGATTCACATTTAAGAAAAACTGTTTTAAGCAAATTCTTGGAGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0005886 GO:0005911 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009507 GO:0009536 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0010033 GO:0010467 GO:0015934 GO:0016020 GO:0019538 GO:0022625 GO:0022626 GO:0030054 GO:0030312 GO:0032991 GO:0034641 GO:0034645 GO:0042221 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0050896 GO:0055044 GO:0071704 GO:0071944 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L28e

Protein Analysis

777

Amino Acids

88.16

Weight (kDa)

4.98

Isoelectric Point (pI)

52.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PX	PF00787	145 - 218	2.9e-12	PX domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001660)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19730 AT2G19730 AT2G19730 AT4G29410 AT4G29410
fragaria_vesca	FvH4_1g06820 FvH4_6g32910
malus_domestica	MD02G1072800.v1.1 MD07G1062600.v1.1 MD09G1196500.v1.1 MD15G1202600.v1.1
prunus_persica	Prupe.3G052900_v2.0.a1 Prupe.7G214600_v2.0.a1 Prupe.7G214600_v2.0.a1
pyrus_communis	pycom09g11360 pycom15g18000 pycom17g18620
rosa_chinensis	RchiOBHm_Chr1g0323731 RchiOBHm_Chr2g0092591 RchiOBHm_Chr2g0142381 RchiOBHm_Chr2g0160241 RchiOBHm_Chr5g0080201
rosa_laevigata	RLG00000016326 RLG00000019956
rosa_multiflora	Rmu_sc0001211.1_g000033 Rmu_sc0004296.1_g000002 Rmu_sc0020806.1_g000001
rosa_roxburghii	Rroxscaffold_2G00102670 Rroxscaffold_2G00103250 Rroxscaffold_2G00148940
rosa_rugosa	Rorug02G0027800 Rorug02G0028000 Rorug02G0372400
rosa_samantha	Rh2AG073700 Rh2AG424200 Rh2BG074600 Rh2BG433800 Rh2BG561300 Rh2CG075700 Rh2DG072800 Rh2DG443700 Rh2DG569800 Rh5DG397100
rosa_wichuraiana	Rw0G015000 Rw2G005920 Rw2G045310 Rw5G024190 Rw7G017720 Rw7G039720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	357, 2197
AccB1I	GGYRCC	2 cut(s)	218, 987
AccB7I	CCANNNNNTGG	1 cut(s)	848
AccI	GTMKAC	1 cut(s)	403
AccII	CGCG	1 cut(s)	177
AciI	CCGC	8 cut(s)	82, 129, 208, 257, 689, 1174, 1684, 2057
AclWI	GGATC	5 cut(s)	50, 62, 365, 680, 1386
AcoI	YGGCCR	2 cut(s)	290, 1120
AcsI	RAATTY	7 cut(s)	953, 993, 1261, 1629, 1706, 1780, 2318
AcuI	CTGAAG	2 cut(s)	1245, 1817
AcyI	GRCGYC	2 cut(s)	135, 988
AfaI	GTAC	2 cut(s)	206, 307
AfiI	CCNNNNNNNGG	5 cut(s)	308, 435, 527, 848, 2077
AjnI	CCWGG	2 cut(s)	983, 1572
Alw21I	GWGCWC	1 cut(s)	2233
Alw26I	GTCTC	2 cut(s)	1408, 1681
AlwI	GGATC	5 cut(s)	50, 62, 365, 680, 1386
AlwNI	CAGNNNCTG	1 cut(s)	374
Ama87I	CYCGRG	1 cut(s)	432
AoxI	GGCC	3 cut(s)	290, 937, 1120
ApeKI	GCWGC	9 cut(s)	662, 665, 691, 1289, 1342, 1687, 1880, 1900, 1903
ApoI	RAATTY	7 cut(s)	953, 993, 1261, 1629, 1706, 1780, 2318
Asp700I	GAANNNNTTC	3 cut(s)	574, 1488, 1920
AspLEI	GCGC	3 cut(s)	177, 186, 990
AspS9I	GGNCC	1 cut(s)	1570
AsuHPI	GGTGA	5 cut(s)	402, 1205, 1738, 1989, 2144
AsuII	TTCGAA	1 cut(s)	1777
AvaI	CYCGRG	1 cut(s)	432
AvaII	GGWCC	1 cut(s)	1570
BaeI	ACNNNNGTAYC	2 cut(s)	912, 945
BalI	TGGCCA	2 cut(s)	292, 1122
BanI	GGYRCC	2 cut(s)	218, 987
BanII	GRGCYC	1 cut(s)	254
BbsI	GAAGAC	4 cut(s)	666, 726, 1138, 2039
Bbv12I	GWGCWC	1 cut(s)	2233
BbvI	GCAGC	9 cut(s)	649, 652, 703, 1276, 1354, 1699, 1887, 1890, 1892
BccI	CCATC	9 cut(s)	137, 266, 306, 1070, 1112, 1144, 1190, 2008, 2134
BceAI	ACGGC	3 cut(s)	142, 232, 846
BcgI	CGANNNNNNTGC	2 cut(s)	1545, 1579
BciT130I	CCWGG	2 cut(s)	985, 1574
BciVI	GTATCC	2 cut(s)	546, 1981
BclI	TGATCA	1 cut(s)	895
BcoDI	GTCTC	2 cut(s)	1408, 1681
BfaI	CTAG	4 cut(s)	650, 971, 1286, 1680
BfmI	CTRYAG	2 cut(s)	1020, 1661
BfoI	RGCGCY	1 cut(s)	991
BfuAI	ACCTGC	2 cut(s)	357, 2197
BfuI	GTATCC	2 cut(s)	546, 1981
BglI	GCCNNNNNGGC	1 cut(s)	216
BglII	AGATCT	4 cut(s)	505, 757, 1441, 1589
Bme1390I	CCNGG	2 cut(s)	985, 1574
Bme18I	GGWCC	1 cut(s)	1570
BmeT110I	CYCGRG	1 cut(s)	432
BmgT120I	GGNCC	1 cut(s)	1570
BmiI	GGNNCC	5 cut(s)	220, 251, 989, 1081, 1201
BmrFI	CCNGG	2 cut(s)	985, 1574
BmsI	GCATC	3 cut(s)	1591, 1996, 2154
BpiI	GAAGAC	4 cut(s)	666, 726, 1138, 2039
BpmI	CTGGAG	2 cut(s)	498, 967
Bpu14I	TTCGAA	1 cut(s)	1777
BpuEI	CTTGAG	1 cut(s)	2100
Bsa29I	ATCGAT	1 cut(s)	615
BsaHI	GRCGYC	2 cut(s)	135, 988
BsaJI	CCNNGG	2 cut(s)	842, 876
BsaWI	WCCGGW	2 cut(s)	412, 998
Bsc4I	CCNNNNNNNGG	5 cut(s)	308, 435, 527, 848, 2077
Bse3DI	GCAATG	1 cut(s)	1337
BseBI	CCWGG	2 cut(s)	985, 1574
BseCI	ATCGAT	1 cut(s)	615
BseDI	CCNNGG	2 cut(s)	842, 876
BseGI	GGATG	8 cut(s)	277, 317, 1081, 1123, 1606, 1678, 2086, 2145
BseLI	CCNNNNNNNGG	5 cut(s)	308, 435, 527, 848, 2077
BseMI	GCAATG	1 cut(s)	1337
BseMII	CTCAG	4 cut(s)	527, 819, 1584, 1822
BseRI	GAGGAG	2 cut(s)	20, 510
BseXI	GCAGC	9 cut(s)	649, 652, 703, 1276, 1354, 1699, 1887, 1890, 1892
BseYI	CCCAGC	1 cut(s)	191
BsgI	GTGCAG	1 cut(s)	1899
Bsh1236I	CGCG	1 cut(s)	177
BshFI	GGCC	3 cut(s)	292, 939, 1122
BshNI	GGYRCC	2 cut(s)	218, 987
BshVI	ATCGAT	1 cut(s)	615
BsiHKAI	GWGCWC	1 cut(s)	2233
BsiHKCI	CYCGRG	1 cut(s)	432
BsiSI	CCGG	2 cut(s)	413, 999
BslFI	GGGAC	2 cut(s)	174, 293
BslI	CCNNNNNNNGG	5 cut(s)	308, 435, 527, 848, 2077
BsmAI	GTCTC	2 cut(s)	1408, 1681
BsmFI	GGGAC	2 cut(s)	174, 293
BsmI	GAATGC	3 cut(s)	491, 1612, 2208
BsnI	GGCC	3 cut(s)	292, 939, 1122
BsoBI	CYCGRG	1 cut(s)	432
Bsp119I	TTCGAA	1 cut(s)	1777
Bsp1286I	GDGCHC	2 cut(s)	254, 2233
Bsp19I	CCATGG	1 cut(s)	876
BspACI	CCGC	8 cut(s)	82, 129, 208, 257, 689, 1174, 1684, 2057
BspANI	GGCC	3 cut(s)	292, 939, 1122
BspCNI	CTCAG	4 cut(s)	528, 820, 1585, 1821
BspDI	ATCGAT	1 cut(s)	615
BspFNI	CGCG	1 cut(s)	177
BspHI	TCATGA	1 cut(s)	1711
BspLI	GGNNCC	5 cut(s)	220, 251, 989, 1081, 1201
BspMI	ACCTGC	2 cut(s)	357, 2197
BspPI	GGATC	5 cut(s)	50, 62, 365, 680, 1386
BspQI	GCTCTTC	1 cut(s)	558
BspT104I	TTCGAA	1 cut(s)	1777
BspT107I	GGYRCC	2 cut(s)	218, 987
BsrDI	GCAATG	1 cut(s)	1337
BssECI	CCNNGG	2 cut(s)	842, 876
BssNI	GRCGYC	2 cut(s)	135, 988
BssT1I	CCWWGG	2 cut(s)	842, 876
Bst2UI	CCWGG	2 cut(s)	985, 1574
Bst4CI	ACNGT	3 cut(s)	170, 331, 2308
Bst6I	CTCTTC	5 cut(s)	558, 1106, 1710, 1779, 1959
BstACI	GRCGYC	2 cut(s)	135, 988
BstBI	TTCGAA	1 cut(s)	1777
BstC8I	GCNNGC	1 cut(s)	1497
BstDEI	CTNAG	6 cut(s)	536, 828, 904, 1593, 1808, 2198
BstDSI	CCRYGG	1 cut(s)	876
BstENI	CCTNNNNNAGG	2 cut(s)	306, 2075
BstF5I	GGATG	8 cut(s)	277, 317, 1081, 1123, 1606, 1678, 2086, 2145
BstFNI	CGCG	1 cut(s)	177
BstH2I	RGCGCY	1 cut(s)	991
BstHHI	GCGC	3 cut(s)	177, 186, 990
BstMAI	GTCTC	2 cut(s)	1408, 1681
BstMWI	GCNNNNNNNGC	9 cut(s)	181, 183, 192, 216, 872, 985, 1286, 2099, 2237
BstNI	CCWGG	2 cut(s)	985, 1574
BstSCI	CCNGG	2 cut(s)	983, 1572
BstSFI	CTRYAG	2 cut(s)	1020, 1661
BstUI	CGCG	1 cut(s)	177
BstV1I	GCAGC	9 cut(s)	649, 652, 703, 1276, 1354, 1699, 1887, 1890, 1892
BstV2I	GAAGAC	4 cut(s)	666, 726, 1138, 2039
BstX2I	RGATCY	6 cut(s)	370, 505, 757, 1378, 1441, 1589
BstYI	RGATCY	6 cut(s)	370, 505, 757, 1378, 1441, 1589
Bsu15I	ATCGAT	1 cut(s)	615
BsuI	GTATCC	2 cut(s)	546, 1981
BsuRI	GGCC	3 cut(s)	292, 939, 1122
BsuTUI	ATCGAT	1 cut(s)	615
BtgI	CCRYGG	1 cut(s)	876
BtsCI	GGATG	8 cut(s)	277, 317, 1081, 1123, 1606, 1678, 2086, 2145
BtsI	GCAGTG	2 cut(s)	1541, 2109
BtsIMutI	CAGTG	2 cut(s)	1541, 2109
BveI	ACCTGC	2 cut(s)	357, 2197
Cac8I	GCNNGC	1 cut(s)	1497
CaiI	CAGNNNCTG	1 cut(s)	374
CciI	TCATGA	1 cut(s)	1711
CfoI	GCGC	3 cut(s)	177, 186, 990
Cfr13I	GGNCC	1 cut(s)	1570
ClaI	ATCGAT	1 cut(s)	615
CseI	GACGC	3 cut(s)	143, 313, 2120
Csp6I	GTAC	2 cut(s)	205, 306
CspCI	CAANNNNNGTGG	2 cut(s)	1517, 1552
CviAII	CATG	7 cut(s)	877, 1072, 1100, 1124, 1301, 1712, 1907
CviQI	GTAC	2 cut(s)	205, 306
DdeI	CTNAG	6 cut(s)	536, 828, 904, 1593, 1808, 2198
DinI	GGCGCC	1 cut(s)	989
EaeI	YGGCCR	2 cut(s)	290, 1120
Eam1104I	CTCTTC	5 cut(s)	558, 1106, 1710, 1779, 1959
EarI	CTCTTC	5 cut(s)	558, 1106, 1710, 1779, 1959
EciI	GGCGGA	1 cut(s)	246
Eco130I	CCWWGG	2 cut(s)	842, 876
Eco24I	GRGCYC	1 cut(s)	254
Eco32I	GATATC	1 cut(s)	613
Eco47I	GGWCC	1 cut(s)	1570
Eco57I	CTGAAG	2 cut(s)	1245, 1817
Eco88I	CYCGRG	1 cut(s)	432
EcoNI	CCTNNNNNAGG	2 cut(s)	306, 2075
EcoRII	CCWGG	2 cut(s)	983, 1572
EcoRV	GATATC	1 cut(s)	613
EcoT14I	CCWWGG	2 cut(s)	842, 876
EcoT38I	GRGCYC	1 cut(s)	254
EgeI	GGCGCC	1 cut(s)	989
EheI	GGCGCC	1 cut(s)	989
ErhI	CCWWGG	2 cut(s)	842, 876
FaeI	CATG	7 cut(s)	880, 1075, 1103, 1127, 1304, 1715, 1910
FalI	AAGNNNNNCTT	6 cut(s)	562, 594, 1147, 1179, 1440, 1472
FaqI	GGGAC	2 cut(s)	174, 293
FatI	CATG	7 cut(s)	876, 1071, 1099, 1123, 1300, 1711, 1906
FauI	CCCGC	1 cut(s)	1167
FbaI	TGATCA	1 cut(s)	895
FblI	GTMKAC	1 cut(s)	403
FokI	GGATG	8 cut(s)	284, 324, 1088, 1130, 1613, 1685, 2093, 2152
FriOI	GRGCYC	1 cut(s)	254
FspBI	CTAG	4 cut(s)	650, 971, 1286, 1680
GlaI	GCGC	3 cut(s)	176, 185, 989
GsaI	CCCAGC	1 cut(s)	195
GsuI	CTGGAG	2 cut(s)	498, 967
HaeII	RGCGCY	1 cut(s)	991
HaeIII	GGCC	3 cut(s)	292, 939, 1122
HapII	CCGG	2 cut(s)	413, 999
HgaI	GACGC	3 cut(s)	143, 313, 2120
HhaI	GCGC	3 cut(s)	177, 186, 990
Hin1I	GRCGYC	2 cut(s)	135, 988
Hin1II	CATG	7 cut(s)	880, 1075, 1103, 1127, 1304, 1715, 1910
Hin6I	GCGC	3 cut(s)	175, 184, 988
HinP1I	GCGC	3 cut(s)	175, 184, 988
HincII	GTYRAC	2 cut(s)	1623, 2185
HindII	GTYRAC	2 cut(s)	1623, 2185
HinfI	GANTC	7 cut(s)	4, 281, 420, 911, 1396, 1619, 2288
HpaII	CCGG	2 cut(s)	413, 999
HphI	GGTGA	5 cut(s)	402, 1205, 1738, 1989, 2144
Hpy166II	GTNNAC	5 cut(s)	404, 709, 1623, 2107, 2185
Hpy8I	GTNNAC	5 cut(s)	404, 709, 1623, 2107, 2185
Hpy99I	CGWCG	5 cut(s)	125, 128, 137, 218, 2114
HpyAV	CCTTC	7 cut(s)	82, 345, 410, 564, 1220, 1551, 1816
HpyCH4III	ACNGT	3 cut(s)	170, 331, 2308
HpyCH4IV	ACGT	1 cut(s)	2027
HpyF10VI	GCNNNNNNNGC	9 cut(s)	181, 183, 192, 216, 872, 985, 1286, 2099, 2237
HpyF3I	CTNAG	6 cut(s)	536, 828, 904, 1593, 1808, 2198
HpySE526I	ACGT	1 cut(s)	2027
Hsp92I	GRCGYC	2 cut(s)	135, 988
Hsp92II	CATG	7 cut(s)	880, 1075, 1103, 1127, 1304, 1715, 1910
HspAI	GCGC	3 cut(s)	175, 184, 988
KasI	GGCGCC	1 cut(s)	987
Ksp22I	TGATCA	1 cut(s)	895
LguI	GCTCTTC	1 cut(s)	558
LmnI	GCTCC	9 cut(s)	181, 249, 523, 733, 1030, 1205, 1234, 1609, 2073
Lsp1109I	GCAGC	9 cut(s)	649, 652, 703, 1276, 1354, 1699, 1887, 1890, 1892
LweI	GCATC	3 cut(s)	1591, 1996, 2154
MaeI	CTAG	4 cut(s)	650, 971, 1286, 1680
MaeII	ACGT	1 cut(s)	2027
MaeIII	GTNAC	4 cut(s)	317, 325, 741, 787
MfeI	CAATTG	2 cut(s)	1236, 1583
MflI	RGATCY	6 cut(s)	370, 505, 757, 1378, 1441, 1589
MhlI	GDGCHC	2 cut(s)	254, 2233
MlsI	TGGCCA	2 cut(s)	292, 1122
MluNI	TGGCCA	2 cut(s)	292, 1122
Mly113I	GGCGCC	1 cut(s)	988
MlyI	GAGTC	2 cut(s)	275, 1628
MmeI	TCCRAC	2 cut(s)	530, 1650
Mox20I	TGGCCA	2 cut(s)	292, 1122
MroXI	GAANNNNTTC	3 cut(s)	574, 1488, 1920
MscI	TGGCCA	2 cut(s)	292, 1122
MslI	CAYNNNNRTG	1 cut(s)	1911
Msp20I	TGGCCA	2 cut(s)	292, 1122
MspI	CCGG	2 cut(s)	413, 999
MspR9I	CCNGG	2 cut(s)	985, 1574
MunI	CAATTG	2 cut(s)	1236, 1583
Mva1269I	GAATGC	3 cut(s)	491, 1612, 2208
MvaI	CCWGG	2 cut(s)	985, 1574
MvnI	CGCG	1 cut(s)	177
MwoI	GCNNNNNNNGC	9 cut(s)	181, 183, 192, 216, 872, 985, 1286, 2099, 2237
NarI	GGCGCC	1 cut(s)	988
NcoI	CCATGG	1 cut(s)	876
NlaIII	CATG	7 cut(s)	880, 1075, 1103, 1127, 1304, 1715, 1910
NlaIV	GGNNCC	5 cut(s)	220, 251, 989, 1081, 1201
NmuCI	GTSAC	2 cut(s)	325, 787
NspV	TTCGAA	1 cut(s)	1777
PaeR7I	CTCGAG	1 cut(s)	432
PagI	TCATGA	1 cut(s)	1711
PciSI	GCTCTTC	1 cut(s)	558
PcsI	WCGNNNNNNNCGW	2 cut(s)	129, 174
PctI	GAATGC	3 cut(s)	491, 1612, 2208
PdmI	GAANNNNTTC	3 cut(s)	574, 1488, 1920
PfeI	GAWTC	5 cut(s)	4, 420, 911, 1396, 2288
PflFI	GACNNNGTC	1 cut(s)	2026
PflMI	CCANNNNNTGG	1 cut(s)	848
PleI	GAGTC	2 cut(s)	275, 1627
PluTI	GGCGCC	1 cut(s)	991
PpsI	GAGTC	2 cut(s)	275, 1627
Psp6I	CCWGG	2 cut(s)	983, 1572
PspFI	CCCAGC	1 cut(s)	191
PspGI	CCWGG	2 cut(s)	983, 1572
PspN4I	GGNNCC	5 cut(s)	220, 251, 989, 1081, 1201
PspPI	GGNCC	1 cut(s)	1570
PspXI	VCTCGAGB	1 cut(s)	432
PstNI	CAGNNNCTG	1 cut(s)	374
PsuI	RGATCY	6 cut(s)	370, 505, 757, 1378, 1441, 1589
PsyI	GACNNNGTC	1 cut(s)	2026
RsaI	GTAC	2 cut(s)	206, 307
RsaNI	GTAC	2 cut(s)	205, 306
RseI	CAYNNNNRTG	1 cut(s)	1911
SapI	GCTCTTC	1 cut(s)	558
Sau96I	GGNCC	1 cut(s)	1570
SchI	GAGTC	2 cut(s)	275, 1628
ScrFI	CCNGG	2 cut(s)	985, 1574
SduI	GDGCHC	2 cut(s)	254, 2233
SfaNI	GCATC	3 cut(s)	1591, 1996, 2154
SfcI	CTRYAG	2 cut(s)	1020, 1661
SfoI	GGCGCC	1 cut(s)	989
Sfr274I	CTCGAG	1 cut(s)	432
SfuI	TTCGAA	1 cut(s)	1777
SinI	GGWCC	1 cut(s)	1570
SlaI	CTCGAG	1 cut(s)	432
SmiMI	CAYNNNNRTG	1 cut(s)	1911
SmlI	CTYRAG	2 cut(s)	432, 2115
SmoI	CTYRAG	2 cut(s)	432, 2115
SsiI	CCGC	8 cut(s)	82, 129, 208, 257, 689, 1174, 1684, 2057
SspDI	GGCGCC	1 cut(s)	987
SspI	AATATT	2 cut(s)	1489, 2245
SspMI	CTAG	4 cut(s)	650, 971, 1286, 1680
StyD4I	CCNGG	2 cut(s)	983, 1572
StyI	CCWWGG	2 cut(s)	842, 876
TaaI	ACNGT	3 cut(s)	170, 331, 2308
TaiI	ACGT	1 cut(s)	2030
TauI	GCSGC	2 cut(s)	132, 1687
TfiI	GAWTC	5 cut(s)	4, 420, 911, 1396, 2288
TscAI	CASTG	2 cut(s)	1541, 2109
TseFI	GTSAC	2 cut(s)	325, 787
TseI	GCWGC	9 cut(s)	662, 665, 691, 1289, 1342, 1687, 1880, 1900, 1903
Tsp45I	GTSAC	2 cut(s)	325, 787
TspGWI	ACGGA	2 cut(s)	720, 2213
TspRI	CASTG	2 cut(s)	1541, 2109
Tth111I	GACNNNGTC	1 cut(s)	2026
Van91I	CCANNNNNTGG	1 cut(s)	848
VpaK11BI	GGWCC	1 cut(s)	1570
XagI	CCTNNNNNAGG	2 cut(s)	306, 2075
XapI	RAATTY	7 cut(s)	953, 993, 1261, 1629, 1706, 1780, 2318
XbaI	TCTAGA	1 cut(s)	649
XhoI	CTCGAG	1 cut(s)	432
XmiI	GTMKAC	1 cut(s)	403
XmnI	GAANNNNTTC	3 cut(s)	574, 1488, 1920
XspI	CTAG	4 cut(s)	650, 971, 1286, 1680

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.