Rorug02G0414000

membrane protein At1g16860-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0001653
Physical Location & Seq
Reverse (-)
53005271 .. 53007402
2132 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0414000.1

Sequence Viewer

Length: 1959 bp
ATGAGACACCGCCGCCACCTGAGACTGGTTCTGGCAATCCCCACGCGCCGCCACTACGCCACAAAATACACCGCCAAAGTAACCTCAACCTCCCCAACCGGCCGCACCCTCTCCGTCGAGGTGACCCCGCCACCTCCCCTCCCCACCGACATCCGCGGCTACACTCTCCCCCGCCGCGACCTCGTCTGCAAAGCCACCCAAATCATCCTCCACCAATCCCGCTCCGCCACGTCGGACCCCTTCCTCGACCTCTCCGACTACCTCTCCTCGCTCTCCCTCTCCCTCACCCCCGCCGAGGCCTCCGAGATCCTCAAGTCTCTAAACGACCCCGACCTCGCCTTAAAATTCTTCCGATTCTGCCCCTCCCTTTCCCCCAAATTCCAACACGACGCCTTCACCTGCAACCGCCTCCTCCTCATCCTCTCCAAGTCCGCCGCCCCCGCCCGCTTCGACCTCGCCCGCTCGATCGTCTCCGACATGCACCGCTCCAACATACGCGGCAACATCTCCACCGTCAATCTCCTCATCGGCCTCTTCGGCAACACCGACGACCTGGAAACCGCCATGGGCCTGGTGAAGAAATGGAGCCTCAGCATGACCTCCTACACATACAAATGTCTAGTTCAGGCCTACTTGCGATCCTACAATTCCACCAAGGCCTTCCAGTCCTACATGGAAATGCGTCGCCATGGTCACAAATTGGACATTTACTCTTACAATATGCTGCTGCATGCACTTGCCAAAGACGAAAAGGTTGAGCAGGCACACAAGGTGTTTGAAGATATGAAGAGGAAGGATTGCGAGCCGGATGAGTTTACATACACAATCATGATCAGAATGAGTGGGAAATTGGGTAAAGGGGATGAGTGTCTGGCGTTTTTTCAGGACTTGTTGAACAAAGGTTGCAATTTGAATTTGATTGTTTATAATACCGTCATTCAGGCTCTTGCTAGGAGCAACATGGTTGATAAGGCGGTCCTTGTGTTTGCGACAATGGTGGAAGCTGATTGTAGGCCGAATGAGTTTACTTACAGTGTGATTTTGAATCTTCTGGTTGCGCAAGGGCAGCTTGGTAGGTTAGATGAGGTGGTGGAGATGTCGAAGAGATATGTGACTAAGTCTATATATGCCTATCTTGTTAAGACGTTGAGCAAATTGGGTCATGATGATGAAGCCCACCGGCTGTTCTGCAACATGTGGAAATTCCATGACAAGGGGGATCGAGATGCGTACATGTCAATGTTAGAGAGTTTGTGTTCGGCAGGTAAAACCGCGGAGGCCATTGATATGTTGAGTAGCATTCATGAGAAAGGGGTATCCACTGACACTATGATGTATAACACAGTGTTGGCCGCGCTTGGGAGGTTGAAGCAAATATCAAATCTTCATGAAGTGTATGAAAAGATGAAAAATGATGGCCCTGAACCGGATATATTTACCTACAACATTATGATTTCCAGCTTTGGTAGGGCTGGGAAGGTTGATGAGGCGATGACAATATTCGAACAGCTTGAGAACAGTGATTGTAAACCTGATATCGTATCTTACAATTCATTGATCAATTGCCTTGGGAAGAATGGTGATGTGGATGAAGCCCACATGAGGTTCAAGGAGATGCAGGAGAAAGGGTTCAGCCCTGATGTTGTCACCTACAGCACCCTAATCGAGTGCTTTGGCAAGACAGATAGGGTTGAAATGGCGTGCAGGTTGTTCGATGACATGCTTGCTCAAGGCTGCTGTCCCAACATTGTCACCTACAACATCTTGCTTGATTGTCTTGAGAGGTGTGGGAGGACTGCCGAGGCGGTGGATTTGTATGCAAAACTAAAGCAGCAGGGTTTGACGCCGGATTGGATTACATATTCAGTGCTTGAACGACTGCAAAGTGGTTCTCATAGGAAATTCAGAGTTCGTAGGCAGAGTCCAATCACAGGTTGGGTTGTCAGCCCTATAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

652

Amino Acids

73.97

Weight (kDa)

8.38

Isoelectric Point (pI)

43.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_24 PF23276 194 - 296 3.6e-06 Fungal tetratrico peptide repeats
PPR_2 PF13041 201 - 248 5.3e-09 PPR repeat family
PPR_long PF17177 208 - 373 1.8e-17 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 226 - 283 2.8e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 231 - 263 5.3e-06 PPR repeat
PPR_2 PF13041 235 - 280 3.4e-17 PPR repeat family
PPR PF01535 237 - 267 6.7e-06 PPR repeat
PPR_3 PF13812 294 - 352 1.1e-07 Pentatricopeptide repeat domain
PPR_1 PF12854 300 - 333 5.1e-06 PPR repeat
PPR_2 PF13041 305 - 351 6e-12 PPR repeat family
TPR_24 PF23276 411 - 503 2.2e-07 Fungal tetratrico peptide repeats
PPR_3 PF13812 433 - 489 4.2e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 442 - 488 1.3e-10 PPR repeat family
PPR_long PF17177 465 - 626 1.5e-11 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 465 - 526 1.5e-12 Pentatricopeptide repeat domain
PPR_1 PF12854 473 - 504 1.1e-10 PPR repeat
PPR_2 PF13041 476 - 523 6.1e-14 PPR repeat family
PPR PF01535 479 - 509 2e-07 PPR repeat
TPR_24 PF23276 497 - 608 6.6e-08 Fungal tetratrico peptide repeats
PPR_3 PF13812 500 - 560 3.5e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 508 - 539 7.1e-10 PPR repeat
PPR_2 PF13041 511 - 559 7.3e-18 PPR repeat family
PPR PF01535 514 - 544 2.6e-09 PPR repeat
PPR_3 PF13812 536 - 591 3.8e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 542 - 574 4.7e-09 PPR repeat
PPR_2 PF13041 546 - 593 2e-16 PPR repeat family
PPR PF01535 549 - 579 3.2e-06 PPR repeat
PPR_3 PF13812 569 - 624 6.5e-07 Pentatricopeptide repeat domain
PPR_1 PF12854 578 - 605 5e-07 PPR repeat
PPR_2 PF13041 581 - 624 4.6e-12 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 927
AarI CACCTGC 1 cut(s) 407
Acc16I TGCGCA 1 cut(s) 1059
Acc36I ACCTGC 3 cut(s) 407, 1253, 1695
AccBSI CCGCTC 3 cut(s) 222, 462, 486
AccII CGCG 6 cut(s) 46, 156, 177, 498, 1274, 1355
AclWI GGATC 3 cut(s) 301, 633, 1227
AcoI YGGCCR 2 cut(s) 100, 1350
AcsI RAATTY 5 cut(s) 344, 377, 913, 1202, 1901
AcyI GRCGYC 2 cut(s) 390, 1844
AdeI CACNNNGTG 1 cut(s) 772
AfaI GTAC 1 cut(s) 1232
AfiI CCNNNNNNNGG 7 cut(s) 25, 295, 1213, 1359, 1426, 1602, 1931
AflIII ACRYGT 2 cut(s) 1194, 1233
AgsI TTSAA 8 cut(s) 779, 895, 913, 1045, 1369, 1609, 1694, 1874
AjiI CACGTC 1 cut(s) 231
AjnI CCWGG 2 cut(s) 552, 570
AloI GAACNNNNNNTCC 2 cut(s) 1613, 1645
AluBI AGCT 4 cut(s) 1004, 1069, 1461, 1510
AluI AGCT 4 cut(s) 1004, 1069, 1461, 1510
Alw26I GTCTC 3 cut(s) 16, 321, 475
AlwI GGATC 3 cut(s) 301, 633, 1227
ApeKI GCWGC 5 cut(s) 724, 727, 1066, 1734, 1831
ApoI RAATTY 5 cut(s) 344, 377, 913, 1202, 1901
Asp700I GAANNNNTTC 1 cut(s) 1628
AspLEI GCGC 3 cut(s) 48, 1060, 1357
AspS9I GGNCC 4 cut(s) 235, 568, 976, 1418
AsuHPI GGTGA 7 cut(s) 133, 277, 388, 586, 1592, 1639, 1744
AsuII TTCGAA 1 cut(s) 1503
AvaII GGWCC 2 cut(s) 235, 976
BbvCI CCTCAGC 1 cut(s) 590
BbvI GCAGC 5 cut(s) 711, 714, 1078, 1721, 1843
BccI CCATC 1 cut(s) 1409
BcgI CGANNNNNNTGC 4 cut(s) 1645, 1679, 1693, 1727
BciT130I CCWGG 2 cut(s) 554, 572
BciVI GTATCC 1 cut(s) 1327
BclI TGATCA 2 cut(s) 831, 1557
BcoDI GTCTC 3 cut(s) 16, 321, 475
BfaI CTAG 2 cut(s) 620, 951
BfmI CTRYAG 1 cut(s) 1651
BfuAI ACCTGC 3 cut(s) 407, 1253, 1695
BfuI GTATCC 1 cut(s) 1327
BglI GCCNNNNNGGC 1 cut(s) 537
Bme1390I CCNGG 2 cut(s) 554, 572
Bme18I GGWCC 2 cut(s) 235, 976
BmgBI CACGTC 1 cut(s) 231
BmgT120I GGNCC 4 cut(s) 235, 568, 976, 1418
BmiI GGNNCC 2 cut(s) 237, 587
BmrFI CCNGG 2 cut(s) 554, 572
BmsI GCATC 2 cut(s) 1216, 1605
Bpu10I CCTNAGC 1 cut(s) 590
Bpu14I TTCGAA 1 cut(s) 1503
BpuEI CTTGAG 4 cut(s) 296, 1532, 1713, 1799
BsaHI GRCGYC 2 cut(s) 390, 1844
BsaJI CCNNGG 8 cut(s) 154, 294, 564, 654, 688, 1272, 1567, 1800
BsaWI WCCGGW 1 cut(s) 1426
BsaXI ACNNNNNCTCC 6 cut(s) 123, 153, 248, 278, 1613, 1643
Bsc4I CCNNNNNNNGG 7 cut(s) 25, 295, 1213, 1359, 1426, 1602, 1931
Bse118I RCCGGY 2 cut(s) 98, 1179
Bse1I ACTGG 2 cut(s) 30, 664
BseBI CCWGG 2 cut(s) 554, 572
BseDI CCNNGG 8 cut(s) 154, 294, 564, 654, 688, 1272, 1567, 1800
BseGI GGATG 6 cut(s) 150, 204, 417, 814, 868, 1594
BseLI CCNNNNNNNGG 7 cut(s) 25, 295, 1213, 1359, 1426, 1602, 1931
BseMII CTCAG 2 cut(s) 11, 604
BseNI ACTGG 2 cut(s) 30, 664
BseRI GAGGAG 4 cut(s) 256, 401, 404, 512
BseX3I CGGCCG 1 cut(s) 100
BseXI GCAGC 5 cut(s) 711, 714, 1078, 1721, 1843
BseYI CCCAGC 1 cut(s) 1472
BsgI GTGCAG 1 cut(s) 1723
Bsh1236I CGCG 6 cut(s) 46, 156, 177, 498, 1274, 1355
Bsh1285I CGRYCG 2 cut(s) 103, 468
BsiEI CGRYCG 2 cut(s) 103, 468
BsiSI CCGG 5 cut(s) 99, 806, 1180, 1427, 1847
BslFI GGGAC 1 cut(s) 1725
BslI CCNNNNNNNGG 7 cut(s) 25, 295, 1213, 1359, 1426, 1602, 1931
BsmAI GTCTC 3 cut(s) 16, 321, 475
BsmBI CGTCTC 1 cut(s) 475
BsmFI GGGAC 1 cut(s) 1725
BsmI GAATGC 1 cut(s) 1299
Bsp119I TTCGAA 1 cut(s) 1503
Bsp143I GATC 6 cut(s) 306, 465, 638, 831, 1219, 1557
Bsp19I CCATGG 2 cut(s) 564, 688
BspCNI CTCAG 2 cut(s) 12, 603
BspFNI CGCG 6 cut(s) 46, 156, 177, 498, 1274, 1355
BspHI TCATGA 4 cut(s) 828, 1162, 1303, 1387
BspLI GGNNCC 2 cut(s) 237, 587
BspMI ACCTGC 3 cut(s) 407, 1253, 1695
BspPI GGATC 3 cut(s) 301, 633, 1227
BspT104I TTCGAA 1 cut(s) 1503
BsrBI CCGCTC 3 cut(s) 222, 462, 486
BsrFI RCCGGY 2 cut(s) 98, 1179
BsrI ACTGG 2 cut(s) 30, 664
BssAI RCCGGY 2 cut(s) 98, 1179
BssECI CCNNGG 8 cut(s) 154, 294, 564, 654, 688, 1272, 1567, 1800
BssMI GATC 6 cut(s) 306, 465, 638, 831, 1219, 1557
BssNI GRCGYC 2 cut(s) 390, 1844
BssT1I CCWWGG 4 cut(s) 564, 654, 688, 1567
Bst2UI CCWGG 2 cut(s) 554, 572
Bst4CI ACNGT 5 cut(s) 514, 934, 1034, 1345, 1520
Bst6I CTCTTC 3 cut(s) 539, 782, 1097
BstACI GRCGYC 2 cut(s) 390, 1844
BstBI TTCGAA 1 cut(s) 1503
BstC8I GCNNGC 7 cut(s) 445, 460, 732, 762, 803, 1702, 1725
BstDEI CTNAG 3 cut(s) 20, 590, 1116
BstDSI CCRYGG 4 cut(s) 154, 564, 688, 1272
BstEII GGTNACC 1 cut(s) 121
BstF5I GGATG 6 cut(s) 150, 204, 417, 814, 868, 1594
BstFNI CGCG 6 cut(s) 46, 156, 177, 498, 1274, 1355
BstHHI GCGC 3 cut(s) 48, 1060, 1357
BstKTI GATC 6 cut(s) 309, 468, 641, 834, 1222, 1560
BstMAI GTCTC 3 cut(s) 16, 321, 475
BstMBI GATC 6 cut(s) 306, 465, 638, 831, 1219, 1557
BstMCI CGRYCG 2 cut(s) 103, 468
BstMWI GCNNNNNNNGC 3 cut(s) 440, 537, 1066
BstNI CCWGG 2 cut(s) 554, 572
BstNSI RCATGY 5 cut(s) 481, 734, 1198, 1237, 1723
BstPI GGTNACC 1 cut(s) 121
BstSCI CCNGG 2 cut(s) 552, 570
BstSFI CTRYAG 1 cut(s) 1651
BstUI CGCG 6 cut(s) 46, 156, 177, 498, 1274, 1355
BstV1I GCAGC 5 cut(s) 711, 714, 1078, 1721, 1843
BstX2I RGATCY 1 cut(s) 306
BstXI CCANNNNNNTGG 1 cut(s) 571
BstYI RGATCY 1 cut(s) 306
BstZI CGGCCG 1 cut(s) 100
BsuI GTATCC 1 cut(s) 1327
BtgI CCRYGG 4 cut(s) 154, 564, 688, 1272
BtgZI GCGATG 1 cut(s) 1505
BtrI CACGTC 1 cut(s) 231
BtsCI GGATG 6 cut(s) 150, 204, 417, 814, 868, 1594
BtsIMutI CAGTG 5 cut(s) 1039, 1320, 1350, 1525, 1872
BveI ACCTGC 3 cut(s) 407, 1253, 1695
Cac8I GCNNGC 7 cut(s) 445, 460, 732, 762, 803, 1702, 1725
CciI TCATGA 4 cut(s) 828, 1162, 1303, 1387
CfoI GCGC 3 cut(s) 48, 1060, 1357
Cfr10I RCCGGY 2 cut(s) 98, 1179
Cfr13I GGNCC 4 cut(s) 235, 568, 976, 1418
Cfr42I CCGCGG 2 cut(s) 157, 1275
CseI GACGC 3 cut(s) 398, 671, 1852
Csp6I GTAC 1 cut(s) 1231
CviQI GTAC 1 cut(s) 1231
DdeI CTNAG 3 cut(s) 20, 590, 1116
DpnI GATC 6 cut(s) 308, 467, 640, 833, 1221, 1559
DpnII GATC 6 cut(s) 306, 465, 638, 831, 1219, 1557
DraIII CACNNNGTG 1 cut(s) 772
EaeI YGGCCR 2 cut(s) 100, 1350
EagI CGGCCG 1 cut(s) 100
Eam1104I CTCTTC 3 cut(s) 539, 782, 1097
EarI CTCTTC 3 cut(s) 539, 782, 1097
EciI GGCGGA 2 cut(s) 214, 421
EclXI CGGCCG 1 cut(s) 100
Eco130I CCWWGG 4 cut(s) 564, 654, 688, 1567
Eco147I AGGCCT 3 cut(s) 299, 629, 659
Eco32I GATATC 1 cut(s) 1537
Eco47I GGWCC 2 cut(s) 235, 976
Eco52I CGGCCG 1 cut(s) 100
Eco91I GGTNACC 1 cut(s) 121
EcoO65I GGTNACC 1 cut(s) 121
EcoRII CCWGG 2 cut(s) 552, 570
EcoRV GATATC 1 cut(s) 1537
EcoT14I CCWWGG 4 cut(s) 564, 654, 688, 1567
ErhI CCWWGG 4 cut(s) 564, 654, 688, 1567
Esp3I CGTCTC 1 cut(s) 475
FalI AAGNNNNNCTT 2 cut(s) 1053, 1085
FaqI GGGAC 1 cut(s) 1725
FauI CCCGC 7 cut(s) 135, 179, 227, 298, 448, 452, 467
FbaI TGATCA 2 cut(s) 831, 1557
FokI GGATG 6 cut(s) 137, 191, 404, 821, 875, 1601
FspBI CTAG 2 cut(s) 620, 951
FspI TGCGCA 1 cut(s) 1059
GlaI GCGC 3 cut(s) 47, 1059, 1356
GsaI CCCAGC 1 cut(s) 1476
HapII CCGG 5 cut(s) 99, 806, 1180, 1427, 1847
HgaI GACGC 3 cut(s) 398, 671, 1852
HhaI GCGC 3 cut(s) 48, 1060, 1357
Hin1I GRCGYC 2 cut(s) 390, 1844
Hin6I GCGC 3 cut(s) 46, 1058, 1355
HinP1I GCGC 3 cut(s) 46, 1058, 1355
HinfI GANTC 3 cut(s) 354, 1045, 1921
HpaII CCGG 5 cut(s) 99, 806, 1180, 1427, 1847
HphI GGTGA 7 cut(s) 133, 277, 388, 586, 1592, 1639, 1744
Hpy166II GTNNAC 3 cut(s) 816, 1026, 1529
Hpy188I TCNGA 7 cut(s) 235, 256, 304, 353, 475, 836, 1907
Hpy188III TCNNGA 7 cut(s) 829, 884, 1163, 1223, 1304, 1388, 1778
Hpy8I GTNNAC 3 cut(s) 816, 1026, 1529
Hpy99I CGWCG 5 cut(s) 119, 235, 392, 551, 687
HpyAV CCTTC 5 cut(s) 250, 403, 670, 787, 1471
HpyCH4III ACNGT 5 cut(s) 514, 934, 1034, 1345, 1520
HpyCH4IV ACGT 2 cut(s) 230, 1145
HpyF10VI GCNNNNNNNGC 3 cut(s) 440, 537, 1066
HpyF3I CTNAG 3 cut(s) 20, 590, 1116
HpySE526I ACGT 2 cut(s) 230, 1145
Hsp92I GRCGYC 2 cut(s) 390, 1844
HspAI GCGC 3 cut(s) 46, 1058, 1355
Ksp22I TGATCA 2 cut(s) 831, 1557
KspI CCGCGG 2 cut(s) 157, 1275
Kzo9I GATC 6 cut(s) 306, 465, 638, 831, 1219, 1557
LmnI GCTCC 4 cut(s) 227, 491, 585, 954
Lsp1109I GCAGC 5 cut(s) 711, 714, 1078, 1721, 1843
LweI GCATC 2 cut(s) 1216, 1605
MaeI CTAG 2 cut(s) 620, 951
MaeII ACGT 2 cut(s) 230, 1145
MaeIII GTNAC 6 cut(s) 79, 121, 692, 1111, 1645, 1750
MalI GATC 6 cut(s) 308, 467, 640, 833, 1221, 1559
MbiI CCGCTC 3 cut(s) 222, 462, 486
MboI GATC 6 cut(s) 306, 465, 638, 831, 1219, 1557
MboII GAAGA 9 cut(s) 340, 526, 589, 791, 799, 1040, 1114, 1376, 1585
MfeI CAATTG 1 cut(s) 1561
MflI RGATCY 1 cut(s) 306
MlyI GAGTC 1 cut(s) 1930
MmeI TCCRAC 5 cut(s) 213, 279, 406, 498, 513
MroXI GAANNNNTTC 1 cut(s) 1628
MseI TTAA 2 cut(s) 341, 1140
MslI CAYNNNNRTG 7 cut(s) 613, 677, 827, 1167, 1238, 1286, 1331
MspA1I CMGCKG 2 cut(s) 156, 1274
MspI CCGG 5 cut(s) 99, 806, 1180, 1427, 1847
MspR9I CCNGG 2 cut(s) 554, 572
MunI CAATTG 1 cut(s) 1561
Mva1269I GAATGC 1 cut(s) 1299
MvaI CCWGG 2 cut(s) 554, 572
MvnI CGCG 6 cut(s) 46, 156, 177, 498, 1274, 1355
MwoI GCNNNNNNNGC 3 cut(s) 440, 537, 1066
NcoI CCATGG 2 cut(s) 564, 688
NdeII GATC 6 cut(s) 306, 465, 638, 831, 1219, 1557
NlaIV GGNNCC 2 cut(s) 237, 587
NmeAIII GCCGAG 2 cut(s) 319, 1825
NmuCI GTSAC 5 cut(s) 121, 692, 1111, 1645, 1750
NsbI TGCGCA 1 cut(s) 1059
NspI RCATGY 5 cut(s) 481, 734, 1198, 1237, 1723
NspV TTCGAA 1 cut(s) 1503
PaeI GCATGC 1 cut(s) 734
PagI TCATGA 4 cut(s) 828, 1162, 1303, 1387
PaqCI CACCTGC 1 cut(s) 407
PceI AGGCCT 3 cut(s) 299, 629, 659
PciI ACATGT 2 cut(s) 1194, 1233
PcsI WCGNNNNNNNCGW 2 cut(s) 252, 543
PctI GAATGC 1 cut(s) 1299
PdmI GAANNNNTTC 1 cut(s) 1628
PfeI GAWTC 2 cut(s) 354, 1045
PflFI GACNNNGTC 2 cut(s) 182, 1117
Ple19I CGATCG 1 cut(s) 468
PleI GAGTC 1 cut(s) 1929
PpsI GAGTC 1 cut(s) 1929
PscI ACATGT 2 cut(s) 1194, 1233
PsiI TTATAA 1 cut(s) 927
Psp6I CCWGG 2 cut(s) 552, 570
PspEI GGTNACC 1 cut(s) 121
PspFI CCCAGC 1 cut(s) 1472
PspGI CCWGG 2 cut(s) 552, 570
PspN4I GGNNCC 2 cut(s) 237, 587
PspPI GGNCC 4 cut(s) 235, 568, 976, 1418
PsuI RGATCY 1 cut(s) 306
PsyI GACNNNGTC 2 cut(s) 182, 1117
PvuI CGATCG 1 cut(s) 468
RsaI GTAC 1 cut(s) 1232
RsaNI GTAC 1 cut(s) 1231
RseI CAYNNNNRTG 7 cut(s) 613, 677, 827, 1167, 1238, 1286, 1331
SacII CCGCGG 2 cut(s) 157, 1275
SaqAI TTAA 2 cut(s) 341, 1140
Sau3AI GATC 6 cut(s) 306, 465, 638, 831, 1219, 1557
Sau96I GGNCC 4 cut(s) 235, 568, 976, 1418
SchI GAGTC 1 cut(s) 1930
ScrFI CCNGG 2 cut(s) 554, 572
SfaNI GCATC 2 cut(s) 1216, 1605
SfcI CTRYAG 1 cut(s) 1651
Sfr303I CCGCGG 2 cut(s) 157, 1275
SfuI TTCGAA 1 cut(s) 1503
SgrBI CCGCGG 2 cut(s) 157, 1275
SinI GGWCC 2 cut(s) 235, 976
SmiMI CAYNNNNRTG 7 cut(s) 613, 677, 827, 1167, 1238, 1286, 1331
SmlI CTYRAG 4 cut(s) 311, 1511, 1728, 1778
SmoI CTYRAG 4 cut(s) 311, 1511, 1728, 1778
SphI GCATGC 1 cut(s) 734
SseBI AGGCCT 3 cut(s) 299, 629, 659
SspI AATATT 1 cut(s) 1500
SspMI CTAG 2 cut(s) 620, 951
StuI AGGCCT 3 cut(s) 299, 629, 659
StyD4I CCNGG 2 cut(s) 552, 570
StyI CCWWGG 4 cut(s) 564, 654, 688, 1567
TaaI ACNGT 5 cut(s) 514, 934, 1034, 1345, 1520
TaiI ACGT 2 cut(s) 233, 1148
TaqI TCGA 9 cut(s) 117, 246, 450, 464, 1100, 1222, 1503, 1665, 1713
TauI GCSGC 8 cut(s) 15, 51, 105, 159, 177, 437, 501, 1355
TfiI GAWTC 2 cut(s) 354, 1045
Tru1I TTAA 2 cut(s) 341, 1140
Tru9I TTAA 2 cut(s) 341, 1140
TscAI CASTG 5 cut(s) 1039, 1327, 1350, 1525, 1872
TseFI GTSAC 5 cut(s) 121, 692, 1111, 1645, 1750
TseI GCWGC 5 cut(s) 724, 727, 1066, 1734, 1831
Tsp45I GTSAC 5 cut(s) 121, 692, 1111, 1645, 1750
TspDTI ATGAA 9 cut(s) 800, 1185, 1292, 1376, 1404, 1413, 1421, 1542, 1605
TspGWI ACGGA 1 cut(s) 103
TspRI CASTG 5 cut(s) 1039, 1327, 1350, 1525, 1872
Tth111I GACNNNGTC 2 cut(s) 182, 1117
VpaK11BI GGWCC 2 cut(s) 235, 976
XapI RAATTY 5 cut(s) 344, 377, 913, 1202, 1901
XceI RCATGY 5 cut(s) 481, 734, 1198, 1237, 1723
XcmI CCANNNNNNNNNTGG 1 cut(s) 1932
XmnI GAANNNNTTC 1 cut(s) 1628
XspI CTAG 2 cut(s) 620, 951
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.