BEST Arabidopsis thaliana protein match is
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| B_lectin | PF01453 | 82 - 177 | 2.2e-25 | D-mannose binding lectin |
| S_locus_glycop | PF00954 | 213 - 324 | 5.8e-21 | S-locus glycoprotein domain |
| PAN_2 | PF08276 | 346 - 418 | 7.7e-08 | PAN-like domain |
| GUB_WAK_bind | PF13947 | 445 - 502 | 1e-05 | Wall-associated receptor kinase galacturonan-binding |
| Pkinase | PF00069 | 715 - 983 | 1.3e-43 | Protein kinase domain |
| PK_Tyr_Ser-Thr | PF07714 | 718 - 984 | 1.9e-45 | Protein tyrosine and serine/threonine kinase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1475, 1931, 2729 |
| Acc36I | ACCTGC | 2 cut(s) | 1038, 1754 |
| AccB1I | GGYRCC | 1 cut(s) | 1131 |
| AccI | GTMKAC | 1 cut(s) | 1719 |
| AciI | CCGC | 3 cut(s) | 1272, 1691, 1922 |
| AclWI | GGATC | 2 cut(s) | 89, 2594 |
| AcoI | YGGCCR | 4 cut(s) | 1104, 1276, 1733, 2370 |
| AcsI | RAATTY | 9 cut(s) | 143, 709, 793, 985, 1499, 1738, 2261, 2767, 3016 |
| AcuI | CTGAAG | 5 cut(s) | 708, 1200, 1475, 1659, 2592 |
| AfaI | GTAC | 8 cut(s) | 33, 635, 1201, 1403, 1492, 1506, 1825, 2097 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 331, 565, 566, 1153, 1218, 1666 |
| AflIII | ACRYGT | 2 cut(s) | 2646, 3008 |
| AjiI | CACGTC | 1 cut(s) | 1233 |
| AjnI | CCWGG | 6 cut(s) | 423, 502, 652, 1152, 1434, 2995 |
| Alw21I | GWGCWC | 3 cut(s) | 1192, 1376, 2017 |
| Alw26I | GTCTC | 5 cut(s) | 540, 595, 1323, 1386, 2655 |
| Alw44I | GTGCAC | 1 cut(s) | 2013 |
| AlwI | GGATC | 2 cut(s) | 89, 2594 |
| Ama87I | CYCGRG | 5 cut(s) | 190, 1653, 2233, 2463, 2954 |
| AoxI | GGCC | 8 cut(s) | 929, 1104, 1276, 1432, 1733, 2177, 2245, 2370 |
| ApaLI | GTGCAC | 1 cut(s) | 2013 |
| ApeKI | GCWGC | 6 cut(s) | 452, 717, 909, 912, 1044, 1570 |
| ApoI | RAATTY | 9 cut(s) | 143, 709, 793, 985, 1499, 1738, 2261, 2767, 3016 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 379, 1897 |
| AspLEI | GCGC | 1 cut(s) | 197 |
| AspS9I | GGNCC | 2 cut(s) | 360, 2177 |
| AsuC2I | CCSGG | 3 cut(s) | 567, 954, 2202 |
| AsuHPI | GGTGA | 4 cut(s) | 568, 799, 2474, 2953 |
| AvaI | CYCGRG | 5 cut(s) | 190, 1653, 2233, 2463, 2954 |
| AvaII | GGWCC | 1 cut(s) | 360 |
| AxyI | CCTNAGG | 1 cut(s) | 1873 |
| BaeGI | GKGCMC | 1 cut(s) | 2017 |
| BalI | TGGCCA | 4 cut(s) | 1106, 1278, 1735, 2372 |
| BanI | GGYRCC | 1 cut(s) | 1131 |
| BanII | GRGCYC | 1 cut(s) | 1192 |
| BauI | CACGAG | 1 cut(s) | 326 |
| BbsI | GAAGAC | 2 cut(s) | 378, 1188 |
| Bbv12I | GWGCWC | 3 cut(s) | 1192, 1376, 2017 |
| BbvCI | CCTCAGC | 1 cut(s) | 2334 |
| BbvI | GCAGC | 6 cut(s) | 464, 729, 899, 921, 1056, 1582 |
| BccI | CCATC | 6 cut(s) | 308, 442, 1588, 1757, 1855, 1867 |
| BceAI | ACGGC | 2 cut(s) | 1078, 2656 |
| BciT130I | CCWGG | 6 cut(s) | 425, 504, 654, 1154, 1436, 2997 |
| BciVI | GTATCC | 1 cut(s) | 2891 |
| BclI | TGATCA | 1 cut(s) | 442 |
| BcnI | CCSGG | 3 cut(s) | 567, 954, 2202 |
| BcoDI | GTCTC | 5 cut(s) | 540, 595, 1323, 1386, 2655 |
| BfaI | CTAG | 7 cut(s) | 735, 1136, 1175, 1218, 1548, 2159, 2493 |
| BfmI | CTRYAG | 3 cut(s) | 174, 1568, 2130 |
| BfoI | RGCGCY | 1 cut(s) | 198 |
| BfuAI | ACCTGC | 2 cut(s) | 1038, 1754 |
| BfuI | GTATCC | 1 cut(s) | 2891 |
| BglII | AGATCT | 2 cut(s) | 1243, 2515 |
| BisI | GCNGC | 6 cut(s) | 453, 718, 910, 913, 1045, 1571 |
| BlsI | GCNGC | 6 cut(s) | 454, 719, 911, 914, 1046, 1572 |
| BmcAI | AGTACT | 2 cut(s) | 33, 1492 |
| Bme1390I | CCNGG | 9 cut(s) | 425, 504, 567, 654, 954, 1154, 1436, 2202, 2997 |
| Bme18I | GGWCC | 1 cut(s) | 360 |
| BmeT110I | CYCGRG | 5 cut(s) | 190, 1653, 2233, 2463, 2954 |
| BmgBI | CACGTC | 1 cut(s) | 1233 |
| BmgT120I | GGNCC | 2 cut(s) | 360, 2177 |
| BmiI | GGNNCC | 3 cut(s) | 864, 1133, 1698 |
| BmrFI | CCNGG | 9 cut(s) | 425, 504, 567, 654, 954, 1154, 1436, 2202, 2997 |
| BmrI | ACTGGG | 1 cut(s) | 1141 |
| BmsI | GCATC | 4 cut(s) | 498, 1488, 1766, 2137 |
| BmuI | ACTGGG | 1 cut(s) | 1141 |
| BpiI | GAAGAC | 2 cut(s) | 378, 1188 |
| BpmI | CTGGAG | 5 cut(s) | 315, 366, 822, 1011, 2898 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1370, 2334 |
| BpuEI | CTTGAG | 2 cut(s) | 1075, 1812 |
| BpuMI | CCSGG | 3 cut(s) | 567, 954, 2202 |
| BsaBI | GATNNNNATC | 2 cut(s) | 441, 2354 |
| BsaI | GGTCTC | 1 cut(s) | 1386 |
| BsaJI | CCNNGG | 5 cut(s) | 503, 566, 1510, 1621, 2248 |
| BsaWI | WCCGGW | 1 cut(s) | 1376 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 154, 184 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 331, 565, 566, 1153, 1218, 1666 |
| Bse21I | CCTNAGG | 1 cut(s) | 1873 |
| Bse3DI | GCAATG | 2 cut(s) | 1618, 2605 |
| Bse8I | GATNNNNATC | 2 cut(s) | 441, 2354 |
| BseBI | CCWGG | 6 cut(s) | 425, 504, 654, 1154, 1436, 2997 |
| BseDI | CCNNGG | 5 cut(s) | 503, 566, 1510, 1621, 2248 |
| BseGI | GGATG | 3 cut(s) | 513, 1013, 2698 |
| BseJI | GATNNNNATC | 2 cut(s) | 441, 2354 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 331, 565, 566, 1153, 1218, 1666 |
| BseMI | GCAATG | 2 cut(s) | 1618, 2605 |
| BseMII | CTCAG | 6 cut(s) | 684, 1361, 2157, 2325, 2531, 2673 |
| BseRI | GAGGAG | 3 cut(s) | 314, 2220, 2832 |
| BseSI | GKGCMC | 1 cut(s) | 2017 |
| BseXI | GCAGC | 6 cut(s) | 464, 729, 899, 921, 1056, 1582 |
| BsgI | GTGCAG | 1 cut(s) | 1141 |
| BshFI | GGCC | 8 cut(s) | 931, 1106, 1278, 1434, 1735, 2179, 2247, 2372 |
| BshNI | GGYRCC | 1 cut(s) | 1131 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1192, 1376, 2017 |
| BsiHKCI | CYCGRG | 5 cut(s) | 190, 1653, 2233, 2463, 2954 |
| BsiSI | CCGG | 5 cut(s) | 566, 954, 1377, 2201, 2857 |
| BslFI | GGGAC | 1 cut(s) | 955 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 331, 565, 566, 1153, 1218, 1666 |
| BsmAI | GTCTC | 5 cut(s) | 540, 595, 1323, 1386, 2655 |
| BsmBI | CGTCTC | 1 cut(s) | 540 |
| BsmFI | GGGAC | 1 cut(s) | 955 |
| BsmI | GAATGC | 3 cut(s) | 1810, 1882, 2749 |
| BsnI | GGCC | 8 cut(s) | 931, 1106, 1278, 1434, 1735, 2179, 2247, 2372 |
| Bso31I | GGTCTC | 1 cut(s) | 1386 |
| BsoBI | CYCGRG | 5 cut(s) | 190, 1653, 2233, 2463, 2954 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1192, 1376, 2017 |
| BspACI | CCGC | 3 cut(s) | 1272, 1691, 1922 |
| BspANI | GGCC | 8 cut(s) | 931, 1106, 1278, 1434, 1735, 2179, 2247, 2372 |
| BspCNI | CTCAG | 6 cut(s) | 683, 1362, 2156, 2326, 2532, 2674 |
| BspHI | TCATGA | 2 cut(s) | 1840, 2863 |
| BspLI | GGNNCC | 3 cut(s) | 864, 1133, 1698 |
| BspMAI | CTGCAG | 1 cut(s) | 1572 |
| BspMI | ACCTGC | 2 cut(s) | 1038, 1754 |
| BspPI | GGATC | 2 cut(s) | 89, 2594 |
| BspT107I | GGYRCC | 1 cut(s) | 1131 |
| BspTNI | GGTCTC | 1 cut(s) | 1386 |
| BsrDI | GCAATG | 2 cut(s) | 1618, 2605 |
| BssECI | CCNNGG | 5 cut(s) | 503, 566, 1510, 1621, 2248 |
| BssSI | CACGAG | 1 cut(s) | 326 |
| BssT1I | CCWWGG | 3 cut(s) | 1510, 1621, 2248 |
| Bst2BI | CACGAG | 1 cut(s) | 326 |
| Bst2UI | CCWGG | 6 cut(s) | 425, 504, 654, 1154, 1436, 2997 |
| Bst4CI | ACNGT | 7 cut(s) | 247, 606, 783, 813, 1324, 1388, 2842 |
| Bst6I | CTCTTC | 3 cut(s) | 1257, 1654, 2541 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 257 |
| BstC8I | GCNNGC | 3 cut(s) | 282, 1337, 1705 |
| BstEII | GGTNACC | 1 cut(s) | 317 |
| BstF5I | GGATG | 3 cut(s) | 513, 1013, 2698 |
| BstH2I | RGCGCY | 1 cut(s) | 198 |
| BstHHI | GCGC | 1 cut(s) | 197 |
| BstMAI | GTCTC | 5 cut(s) | 540, 595, 1323, 1386, 2655 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 201, 257, 1440 |
| BstNI | CCWGG | 6 cut(s) | 425, 504, 654, 1154, 1436, 2997 |
| BstNSI | RCATGY | 6 cut(s) | 29, 92, 1953, 2650, 2856, 3012 |
| BstPI | GGTNACC | 1 cut(s) | 317 |
| BstSCI | CCNGG | 9 cut(s) | 423, 502, 565, 652, 952, 1152, 1434, 2200, 2995 |
| BstSFI | CTRYAG | 3 cut(s) | 174, 1568, 2130 |
| BstSLI | GKGCMC | 1 cut(s) | 2017 |
| BstV1I | GCAGC | 6 cut(s) | 464, 729, 899, 921, 1056, 1582 |
| BstV2I | GAAGAC | 2 cut(s) | 378, 1188 |
| BstX2I | RGATCY | 3 cut(s) | 1243, 2515, 2586 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 981 |
| BstYI | RGATCY | 3 cut(s) | 1243, 2515, 2586 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1873 |
| BsuI | GTATCC | 1 cut(s) | 2891 |
| BsuRI | GGCC | 8 cut(s) | 931, 1106, 1278, 1434, 1735, 2179, 2247, 2372 |
| BtgZI | GCGATG | 1 cut(s) | 1845 |
| BtrI | CACGTC | 1 cut(s) | 1233 |
| BtsCI | GGATG | 3 cut(s) | 513, 1013, 2698 |
| BtsI | GCAGTG | 1 cut(s) | 848 |
| BtsIMutI | CAGTG | 5 cut(s) | 80, 291, 848, 881, 1154 |
| BveI | ACCTGC | 2 cut(s) | 1038, 1754 |
| Cac8I | GCNNGC | 3 cut(s) | 282, 1337, 1705 |
| CciI | TCATGA | 2 cut(s) | 1840, 2863 |
| CfoI | GCGC | 1 cut(s) | 197 |
| Cfr13I | GGNCC | 2 cut(s) | 360, 2177 |
| CseI | GACGC | 1 cut(s) | 671 |
| CsiI | ACCWGGT | 2 cut(s) | 423, 2995 |
| Csp6I | GTAC | 8 cut(s) | 32, 634, 1200, 1402, 1491, 1505, 1824, 2096 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 352, 387 |
| CviQI | GTAC | 8 cut(s) | 32, 634, 1200, 1402, 1491, 1505, 1824, 2096 |
| EaeI | YGGCCR | 4 cut(s) | 1104, 1276, 1733, 2370 |
| Eam1104I | CTCTTC | 3 cut(s) | 1257, 1654, 2541 |
| EarI | CTCTTC | 3 cut(s) | 1257, 1654, 2541 |
| Ecl136II | GAGCTC | 1 cut(s) | 1190 |
| Eco130I | CCWWGG | 3 cut(s) | 1510, 1621, 2248 |
| Eco24I | GRGCYC | 1 cut(s) | 1192 |
| Eco31I | GGTCTC | 1 cut(s) | 1386 |
| Eco47I | GGWCC | 1 cut(s) | 360 |
| Eco53kI | GAGCTC | 1 cut(s) | 1190 |
| Eco57I | CTGAAG | 5 cut(s) | 708, 1200, 1475, 1659, 2592 |
| Eco81I | CCTNAGG | 1 cut(s) | 1873 |
| Eco88I | CYCGRG | 5 cut(s) | 190, 1653, 2233, 2463, 2954 |
| Eco91I | GGTNACC | 1 cut(s) | 317 |
| EcoICRI | GAGCTC | 1 cut(s) | 1190 |
| EcoO65I | GGTNACC | 1 cut(s) | 317 |
| EcoRI | GAATTC | 3 cut(s) | 985, 2261, 3016 |
| EcoRII | CCWGG | 6 cut(s) | 423, 502, 652, 1152, 1434, 2995 |
| EcoT14I | CCWWGG | 3 cut(s) | 1510, 1621, 2248 |
| EcoT38I | GRGCYC | 1 cut(s) | 1192 |
| ErhI | CCWWGG | 3 cut(s) | 1510, 1621, 2248 |
| Esp3I | CGTCTC | 1 cut(s) | 540 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1186, 1218, 1448, 1480 |
| FaqI | GGGAC | 1 cut(s) | 955 |
| FauNDI | CATATG | 2 cut(s) | 218, 2949 |
| FbaI | TGATCA | 1 cut(s) | 442 |
| FblI | GTMKAC | 1 cut(s) | 1719 |
| Fnu4HI | GCNGC | 6 cut(s) | 453, 718, 910, 913, 1045, 1571 |
| FokI | GGATG | 3 cut(s) | 520, 1020, 2705 |
| FriOI | GRGCYC | 1 cut(s) | 1192 |
| Fsp4HI | GCNGC | 6 cut(s) | 453, 718, 910, 913, 1045, 1571 |
| FspBI | CTAG | 7 cut(s) | 735, 1136, 1175, 1218, 1548, 2159, 2493 |
| GlaI | GCGC | 1 cut(s) | 196 |
| GluI | GCNGC | 6 cut(s) | 453, 718, 910, 913, 1045, 1571 |
| GsuI | CTGGAG | 5 cut(s) | 315, 366, 822, 1011, 2898 |
| HaeII | RGCGCY | 1 cut(s) | 198 |
| HaeIII | GGCC | 8 cut(s) | 931, 1106, 1278, 1434, 1735, 2179, 2247, 2372 |
| HapII | CCGG | 5 cut(s) | 566, 954, 1377, 2201, 2857 |
| HgaI | GACGC | 1 cut(s) | 671 |
| HhaI | GCGC | 1 cut(s) | 197 |
| Hin6I | GCGC | 1 cut(s) | 195 |
| HinP1I | GCGC | 1 cut(s) | 195 |
| HincII | GTYRAC | 1 cut(s) | 534 |
| HindII | GTYRAC | 1 cut(s) | 534 |
| HindIII | AAGCTT | 3 cut(s) | 2195, 2380, 2868 |
| HpaII | CCGG | 5 cut(s) | 566, 954, 1377, 2201, 2857 |
| HphI | GGTGA | 4 cut(s) | 568, 799, 2474, 2953 |
| Hpy166II | GTNNAC | 5 cut(s) | 363, 534, 1720, 2015, 2185 |
| Hpy8I | GTNNAC | 5 cut(s) | 363, 534, 1720, 2015, 2185 |
| HpyAV | CCTTC | 4 cut(s) | 589, 683, 1450, 2804 |
| HpyCH4III | ACNGT | 7 cut(s) | 247, 606, 783, 813, 1324, 1388, 2842 |
| HpyCH4IV | ACGT | 1 cut(s) | 1232 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 201, 257, 1440 |
| HpySE526I | ACGT | 1 cut(s) | 1232 |
| HspAI | GCGC | 1 cut(s) | 195 |
| Ksp22I | TGATCA | 1 cut(s) | 442 |
| LmnI | GCTCC | 4 cut(s) | 692, 862, 1684, 2917 |
| Lsp1109I | GCAGC | 6 cut(s) | 464, 729, 899, 921, 1056, 1582 |
| LweI | GCATC | 4 cut(s) | 498, 1488, 1766, 2137 |
| MabI | ACCWGGT | 2 cut(s) | 423, 2995 |
| MaeI | CTAG | 7 cut(s) | 735, 1136, 1175, 1218, 1548, 2159, 2493 |
| MaeII | ACGT | 1 cut(s) | 1232 |
| MaeIII | GTNAC | 8 cut(s) | 185, 232, 317, 340, 807, 3028, 3041, 3052 |
| MfeI | CAATTG | 1 cut(s) | 1819 |
| MflI | RGATCY | 3 cut(s) | 1243, 2515, 2586 |
| MhlI | GDGCHC | 3 cut(s) | 1192, 1376, 2017 |
| MlsI | TGGCCA | 4 cut(s) | 1106, 1278, 1735, 2372 |
| MluNI | TGGCCA | 4 cut(s) | 1106, 1278, 1735, 2372 |
| MlyI | GAGTC | 6 cut(s) | 422, 1028, 1097, 1665, 2046, 2381 |
| MmeI | TCCRAC | 5 cut(s) | 312, 840, 1057, 1218, 2670 |
| Mox20I | TGGCCA | 4 cut(s) | 1106, 1278, 1735, 2372 |
| MroXI | GAANNNNTTC | 2 cut(s) | 379, 1897 |
| MscI | TGGCCA | 4 cut(s) | 1106, 1278, 1735, 2372 |
| MslI | CAYNNNNRTG | 1 cut(s) | 398 |
| Msp20I | TGGCCA | 4 cut(s) | 1106, 1278, 1735, 2372 |
| MspA1I | CMGCKG | 3 cut(s) | 912, 1693, 2918 |
| MspI | CCGG | 5 cut(s) | 566, 954, 1377, 2201, 2857 |
| MspR9I | CCNGG | 9 cut(s) | 425, 504, 567, 654, 954, 1154, 1436, 2202, 2997 |
| MunI | CAATTG | 1 cut(s) | 1819 |
| Mva1269I | GAATGC | 3 cut(s) | 1810, 1882, 2749 |
| MvaI | CCWGG | 6 cut(s) | 425, 504, 654, 1154, 1436, 2997 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 201, 257, 1440 |
| NciI | CCSGG | 3 cut(s) | 567, 954, 2202 |
| NdeI | CATATG | 2 cut(s) | 218, 2949 |
| NlaIV | GGNNCC | 3 cut(s) | 864, 1133, 1698 |
| NmuCI | GTSAC | 1 cut(s) | 232 |
| NspI | RCATGY | 6 cut(s) | 29, 92, 1953, 2650, 2856, 3012 |
| PaeR7I | CTCGAG | 3 cut(s) | 1653, 2233, 2954 |
| PagI | TCATGA | 2 cut(s) | 1840, 2863 |
| PciI | ACATGT | 2 cut(s) | 2646, 3008 |
| PctI | GAATGC | 3 cut(s) | 1810, 1882, 2749 |
| PdmI | GAANNNNTTC | 2 cut(s) | 379, 1897 |
| PfeI | GAWTC | 8 cut(s) | 113, 437, 1316, 1544, 2305, 2489, 2860, 2944 |
| PfoI | TCCNGGA | 1 cut(s) | 2200 |
| PkrI | GCNGC | 6 cut(s) | 454, 719, 911, 914, 1046, 1572 |
| PleI | GAGTC | 6 cut(s) | 421, 1027, 1096, 1664, 2045, 2381 |
| PpsI | GAGTC | 6 cut(s) | 421, 1027, 1096, 1664, 2045, 2381 |
| PscI | ACATGT | 2 cut(s) | 2646, 3008 |
| PsiI | TTATAA | 3 cut(s) | 1475, 1931, 2729 |
| Psp124BI | GAGCTC | 1 cut(s) | 1192 |
| Psp6I | CCWGG | 6 cut(s) | 423, 502, 652, 1152, 1434, 2995 |
| PspEI | GGTNACC | 1 cut(s) | 317 |
| PspGI | CCWGG | 6 cut(s) | 423, 502, 652, 1152, 1434, 2995 |
| PspN4I | GGNNCC | 3 cut(s) | 864, 1133, 1698 |
| PspPI | GGNCC | 2 cut(s) | 360, 2177 |
| PspXI | VCTCGAGB | 1 cut(s) | 2954 |
| PstI | CTGCAG | 1 cut(s) | 1572 |
| PsuI | RGATCY | 3 cut(s) | 1243, 2515, 2586 |
| PvuII | CAGCTG | 2 cut(s) | 912, 2918 |
| RsaI | GTAC | 8 cut(s) | 33, 635, 1201, 1403, 1492, 1506, 1825, 2097 |
| RsaNI | GTAC | 8 cut(s) | 32, 634, 1200, 1402, 1491, 1505, 1824, 2096 |
| RseI | CAYNNNNRTG | 1 cut(s) | 398 |
| SacI | GAGCTC | 1 cut(s) | 1192 |
| SatI | GCNGC | 6 cut(s) | 453, 718, 910, 913, 1045, 1571 |
| Sau96I | GGNCC | 2 cut(s) | 360, 2177 |
| ScaI | AGTACT | 2 cut(s) | 33, 1492 |
| SchI | GAGTC | 6 cut(s) | 422, 1028, 1097, 1665, 2046, 2381 |
| ScrFI | CCNGG | 9 cut(s) | 425, 504, 567, 654, 954, 1154, 1436, 2202, 2997 |
| SduI | GDGCHC | 3 cut(s) | 1192, 1376, 2017 |
| SexAI | ACCWGGT | 2 cut(s) | 423, 2995 |
| SfaNI | GCATC | 4 cut(s) | 498, 1488, 1766, 2137 |
| SfcI | CTRYAG | 3 cut(s) | 174, 1568, 2130 |
| Sfr274I | CTCGAG | 3 cut(s) | 1653, 2233, 2954 |
| SinI | GGWCC | 1 cut(s) | 360 |
| SlaI | CTCGAG | 3 cut(s) | 1653, 2233, 2954 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 398 |
| SmlI | CTYRAG | 5 cut(s) | 1054, 1653, 1827, 2233, 2954 |
| SmoI | CTYRAG | 5 cut(s) | 1054, 1653, 1827, 2233, 2954 |
| SsiI | CCGC | 3 cut(s) | 1272, 1691, 1922 |
| SspI | AATATT | 1 cut(s) | 460 |
| SspMI | CTAG | 7 cut(s) | 735, 1136, 1175, 1218, 1548, 2159, 2493 |
| SstI | GAGCTC | 1 cut(s) | 1192 |
| StyD4I | CCNGG | 9 cut(s) | 423, 502, 565, 652, 952, 1152, 1434, 2200, 2995 |
| StyI | CCWWGG | 3 cut(s) | 1510, 1621, 2248 |
| TaaI | ACNGT | 7 cut(s) | 247, 606, 783, 813, 1324, 1388, 2842 |
| TaiI | ACGT | 1 cut(s) | 1235 |
| TatI | WGTACW | 5 cut(s) | 31, 1401, 1490, 1504, 1823 |
| TfiI | GAWTC | 8 cut(s) | 113, 437, 1316, 1544, 2305, 2489, 2860, 2944 |
| TscAI | CASTG | 5 cut(s) | 87, 298, 848, 881, 1154 |
| TseFI | GTSAC | 1 cut(s) | 232 |
| TseI | GCWGC | 6 cut(s) | 452, 717, 909, 912, 1044, 1570 |
| Tsp45I | GTSAC | 1 cut(s) | 232 |
| TspGWI | ACGGA | 2 cut(s) | 621, 1397 |
| TspRI | CASTG | 5 cut(s) | 87, 298, 848, 881, 1154 |
| VneI | GTGCAC | 1 cut(s) | 2013 |
| VpaK11BI | GGWCC | 1 cut(s) | 360 |
| XapI | RAATTY | 9 cut(s) | 143, 709, 793, 985, 1499, 1738, 2261, 2767, 3016 |
| XbaI | TCTAGA | 2 cut(s) | 1547, 2492 |
| XceI | RCATGY | 6 cut(s) | 29, 92, 1953, 2650, 2856, 3012 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2626 |
| XhoI | CTCGAG | 3 cut(s) | 1653, 2233, 2954 |
| XmiI | GTMKAC | 1 cut(s) | 1719 |
| XmnI | GAANNNNTTC | 2 cut(s) | 379, 1897 |
| XspI | CTAG | 7 cut(s) | 735, 1136, 1175, 1218, 1548, 2159, 2493 |
| ZrmI | AGTACT | 2 cut(s) | 33, 1492 |