Rorug02G0538900

BEST Arabidopsis thaliana protein match is

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0001705
Physical Location & Seq
Reverse (-)
66839798 .. 66844398
4601 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0538900.1

Sequence Viewer

Length: 3075 bp
ATGAAGTTTATCCGAAGAACAAAGATAACAAAAGCAAATGGCATGCTATCTTCCATCTTCTTATCATATGTACTCTTGTTGTGCTTTTCTCACCCCTTCTGCTCTGCTAGAGATACAATAACCGAAGATGATCCAATTATAGATGATGGATCAGAAGGTCTTGTTTCAGCTGGAGGAAAATTTGAACTGGGATTCTTTTCCCTAAATGGAACAGGAAGCTCAGGCAGTTATAGAAGATATGTTGGCATATGGTATCACAACATGACTCCAACAGTTATATGGGTTGCCAACAGAGACAAGCCACTACTTGCCAATCACACTGGAGTTCTTGCAATTAATCAGGGTACCCTTAAAGTGTTGGACACAACTTCTGGAATGCCCTTATGGTCGGTAGAGATCGATAAAATACGTTCTTTCAATCGGACAGCGAAACTCAAGTATGATGGGAACTTGGTGTTAAGTGATACTGGTGAGTTGACAGCGGATCCTTTGTGGCAGAGCTTTCAAAACCCAACTGATACATTCATTCCTGGGATGCTAATGGATAGTAACTTGGAGTTGACTTCATGGAGCAACGAAGATGACCCAAGAACTGGGAACTTCACCTTCAAACTAGATCAACAAAGTCAGTATATTATCTTAAAAAATTTAATGCCTTACTGGAAAACGGGAGGACCAGGTGAGTTTTTCAGGTCAGTTGAAATGCCTCGGGTAGTAACTTACTTATTATCAAATTTCAGCAACAGCACTGTTACAAGTATAGGGATTGGTAAGTTCAACAAGAGCACTGTTACTAGTCCTCCCCAATTTGATTACACTCATGCACGATTGGTGATATCCCATAGTGGAGAGCTGAAGATTTCAACATGGATTGAAGACTTGCAGTGGGTTCCGGTTTGGTCAGAGCCAAAAGATCAATGCAGTGTGTATAATGCTTGTGGGAACTTTGGCAGCTGTAATACTAATAATAACCCGGTGGTGTGCAAGTGTTTGCCAGGTTTTAAGCCCCAGTCTCTAGATAAATGGACTTCTGGAGACTTCTCAGACGGATGCACAAGAGACTCGTCAATATGTGGGCGTGATGACACCTTTTTGAGTTTGAAGATGATGAAAGTGGGAAACCCAGACACAGAGATTGTTGTTCACAATGAAACAGAATGCAAGAACACGTGCCTCAACAGCTGCCAGTGCCAGGCATACTCATATGCCGCACCTGAAAGCATAGCTCAAAGGGGTCTTCGTAAAACTTCCTTGTGCAGGGTATGGCTTAAGGACTTAAATAATCTTGTAGAAGAGTATGACAATAGTCATGACATTGCTGCTCGAGTTGCCTTGTCTGATATAGAATCAACTATAAGAGACTGCAGCCCTTGTGGCACAACTACAATTCCTTATCCTCTGAGCACTAGATCAGATTGTGGCGACCCCATGTACTTAAGTTTCGCGTGCAATGCCGCCATTAATGAATTTAGCTTCCTGGGACCAGATGACACCTCCTTTAGGGTTATAAATATCAGCCGAAGTACACAACGATTCATTATCAAACCCAAAAATATGAATTATTGTGATTCTAGAAACAGAGTGCTGAACATTTCCTTCCCGTTTAAGGTAATCAGTTGGTGTAGCTCTGACCTGATGAGGAATTTTATTTCCGGCATAAATTCATCCAGCGATCCTTCTGTAATAGAGATGGGTTGGGAGCCACCACCGGAAGCAAGCTGCACTACCTTAGAAGACTGCAGGGATTGGCCATATTCAACTTGCAATCCAGTAATAGGGGGAAAGAAAAAATGCCTTTGCAATACAAATTTTCAATGGAGCGGCATTGACTTAAATTGTACTCAAGGAAATCTACAAGAGCTATCAAATAAGAGTTCAAGGAAAAAACTGTTATTGTCTCTGGTTGTCATGGCAGTCATAAGTGGGATTTTTCTGGCATGCATCATTGGTTTTTGTATATGGAGAAGAAAGATTACTAAGAGACGAGATCAAGTAAGTCGTCCGCAGCTCGATAGTGAAAGACGAGTCAAAGAGCTCATAGACACGAGTGACTTCAATGAAGAAGATGACAAAGGCATAGATGTACCTTTTTTTGATTTGCAAAGCATACTAGACGCTACAGATAATTTCTCAATTGGAAACAAGCTTGGACAGGGGGGGTATGGGCCTGTTTACAAGGGGATCTTCCCTGGAGGCCAAGAAATTGCTGTAAAGAGGCTATCAAGAGCTTCAGGACAAGGGTTACAGGAGTTTAAGAATGAGGTGGTGCTAATCGCCAAACTTCAACATCGTAATCTTGTAAGACTCAGAGGATATTGCATGAAAGGAGAAGAAAAGATTTTACTCTATGAGTACATGCCTAACAAAAGCTTGGATTCCTTTATATTTGATCATACACAAAGCATGTTTCTCAATTGGGAGATGCGGTTTAACATCATTTTGGGAATTGCTCGAGGACTTCTTTATCTTCATCAAGATTCCAGGTTGAGGATCATTCATAGAGATTTGAAAACCAGCAACGTTCTTTTGGATGAGGAGATGAACCCCAAAATATCCGACTTCGGCTTGGCCAGGATTGTTGGAGGCAAAGAAACCGAGGCAAACACAAATACAGTAGTAGGAACCTATGGTTACATGTCGCCGGAATATGCATTGGATGGAAATTTCTCTGTCAAATCAGATGTCTTTAGTTTCGGTGTGGTTCTTCTAGAGATAATCAGCGGAAAAAAGAACGCAGGATTTGATCAGTCCAAACAAACTTTCAGTCTCCTTAGTTATACATGGGGACTCTGGACAGAAAACAAGGTGTTGGATTTAATGGAAAACAATTTGGAAGAAAGTTGCAACAGAAGTGAATTTATAAAGTGTGTAAATGTTGGGCTCTTATGCGTACAAGAAGATCCGGTTGATCGCCCTACAATGTCAAATGTTGTTACCTTGCTTGACAGTGAAACTGCAATCCCACCAACTCCTAAACAACCAGCGTTTTTCACACGGAGAGGCAACTCTAGCACAACTTCCTCTTCTACTAAACCAGAAACATATTCTGAAATAACTACTCTGGAAGGTAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF569

Protein Analysis

1024

Amino Acids

114.83

Weight (kDa)

5.87

Isoelectric Point (pI)

43.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 91 - 185 5.1e-21 D-mannose binding lectin
S_locus_glycop PF00954 260 - 337 1.4e-19 S-locus glycoprotein domain
PAN_2 PF08276 358 - 428 6e-12 PAN-like domain
Pkinase PF00069 711 - 978 5.3e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 712 - 980 2.4e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1508, 2861
Acc65I GGTACC 1 cut(s) 344
AccB1I GGYRCC 1 cut(s) 344
AccB7I CCANNNNNTGG 1 cut(s) 593
AccBSI CCGCTC 1 cut(s) 1821
AccII CGCG 1 cut(s) 1445
AciI CCGC 7 cut(s) 482, 1209, 1455, 1821, 2003, 2425, 2721
AclI AACGTT 1 cut(s) 2520
AclWI GGATC 8 cut(s) 125, 157, 479, 492, 1667, 2189, 2498, 2894
AcoI YGGCCR 2 cut(s) 1748, 2568
AcsI RAATTY 9 cut(s) 179, 646, 733, 1466, 1642, 1660, 1807, 2662, 2855
AcuI CTGAAG 2 cut(s) 875, 2214
AcvI CACGTG 1 cut(s) 1170
AfaI GTAC 8 cut(s) 72, 346, 1433, 1525, 1840, 2085, 2354, 2892
AfiI CCNNNNNNNGG 7 cut(s) 593, 1192, 1257, 1500, 1606, 1775, 2487
AflII CTTAAG 2 cut(s) 1268, 1435
AflIII ACRYGT 2 cut(s) 1167, 2634
AhlI ACTAGT 1 cut(s) 794
AjnI CCWGG 8 cut(s) 529, 676, 994, 1191, 1476, 2188, 2480, 2570
AjuI GAANNNNNNNTTGG 2 cut(s) 2744, 2776
Alw21I GWGCWC 3 cut(s) 788, 1406, 2037
Alw26I GTCTC 8 cut(s) 288, 1017, 1029, 1053, 1353, 1902, 1975, 2771
AlwI GGATC 8 cut(s) 125, 157, 479, 492, 1667, 2189, 2498, 2894
Ama87I CYCGRG 3 cut(s) 708, 1323, 2451
AoxI GGCC 4 cut(s) 1748, 2165, 2194, 2568
ApeKI GCWGC 6 cut(s) 951, 1182, 1319, 1365, 1719, 2005
ApoI RAATTY 9 cut(s) 179, 646, 733, 1466, 1642, 1660, 1807, 2662, 2855
ArsI GACNNNNNNTTYG 4 cut(s) 2667, 2699, 2749, 2781
AseI ATTAAT 2 cut(s) 336, 1461
Asp718I GGTACC 1 cut(s) 344
AspS9I GGNCC 3 cut(s) 674, 1481, 2165
AsuC2I CCSGG 1 cut(s) 974
AsuHPI GGTGA 5 cut(s) 83, 482, 595, 692, 844
AvaI CYCGRG 3 cut(s) 708, 1323, 2451
AvaII GGWCC 2 cut(s) 674, 1481
BalI TGGCCA 2 cut(s) 1750, 2570
BamHI GGATCC 1 cut(s) 484
BanI GGYRCC 1 cut(s) 344
BanII GRGCYC 2 cut(s) 2037, 2883
BarI GAAGNNNNNNTAC 2 cut(s) 1957, 1989
BauI CACGAG 1 cut(s) 2044
BbrPI CACGTG 1 cut(s) 1170
BbsI GAAGAC 3 cut(s) 882, 1229, 1740
Bbv12I GWGCWC 3 cut(s) 788, 1406, 2037
BbvI GCAGC 6 cut(s) 963, 1169, 1306, 1377, 1706, 2017
BccI CCATC 5 cut(s) 62, 140, 437, 1684, 2651
BciT130I CCWGG 8 cut(s) 531, 678, 996, 1193, 1478, 2190, 2482, 2572
BclI TGATCA 2 cut(s) 2389, 2743
BcnI CCSGG 1 cut(s) 974
BcoDI GTCTC 8 cut(s) 288, 1017, 1029, 1053, 1353, 1902, 1975, 2771
BcuI ACTAGT 1 cut(s) 794
BfaI CTAG 9 cut(s) 108, 614, 795, 1016, 1407, 1572, 2111, 2708, 3009
BfmI CTRYAG 3 cut(s) 1363, 1738, 2118
BfrI CTTAAG 2 cut(s) 1268, 1435
BglI GCCNNNNNGGC 1 cut(s) 1374
BisI GCNGC 9 cut(s) 952, 1183, 1209, 1320, 1366, 1455, 1720, 1822, 2006
BlsI GCNGC 9 cut(s) 953, 1184, 1210, 1321, 1367, 1456, 1721, 1823, 2007
Bme1390I CCNGG 9 cut(s) 531, 678, 974, 996, 1193, 1478, 2190, 2482, 2572
Bme18I GGWCC 2 cut(s) 674, 1481
BmeT110I CYCGRG 3 cut(s) 708, 1323, 2451
BmgT120I GGNCC 3 cut(s) 674, 1481, 2165
BmiI GGNNCC 6 cut(s) 346, 486, 891, 1482, 1701, 2623
BmrFI CCNGG 9 cut(s) 531, 678, 974, 996, 1193, 1478, 2190, 2482, 2572
BmrI ACTGGG 3 cut(s) 197, 603, 1003
BmsI GCATC 4 cut(s) 525, 1040, 1950, 2412
BmuI ACTGGG 3 cut(s) 197, 603, 1003
BoxI GACNNNNGTC 1 cut(s) 1305
BpiI GAAGAC 3 cut(s) 882, 1229, 1740
BpmI CTGGAG 4 cut(s) 192, 342, 1053, 2211
Bpu10I CCTNAGC 1 cut(s) 220
BpuEI CTTGAG 2 cut(s) 419, 1827
BpuMI CCSGG 1 cut(s) 974
Bsa29I ATCGAT 1 cut(s) 399
BsaAI YACGTR 1 cut(s) 1170
BsaJI CCNNGG 5 cut(s) 530, 707, 1477, 2188, 2595
BsaWI WCCGGW 3 cut(s) 892, 1708, 2902
BsaXI ACNNNNNCTCC 4 cut(s) 784, 814, 2411, 2441
Bsc4I CCNNNNNNNGG 7 cut(s) 593, 1192, 1257, 1500, 1606, 1775, 2487
Bse1I ACTGG 8 cut(s) 192, 325, 472, 598, 665, 1009, 1186, 1769
Bse3DI GCAATG 2 cut(s) 1314, 1456
BseBI CCWGG 8 cut(s) 531, 678, 996, 1193, 1478, 2190, 2482, 2572
BseCI ATCGAT 1 cut(s) 399
BseDI CCNNGG 5 cut(s) 530, 707, 1477, 2188, 2595
BseGI GGATG 5 cut(s) 540, 1055, 1664, 2536, 2662
BseLI CCNNNNNNNGG 7 cut(s) 593, 1192, 1257, 1500, 1606, 1775, 2487
BseMI GCAATG 2 cut(s) 1314, 1456
BseMII CTCAG 4 cut(s) 234, 1056, 1391, 2320
BseNI ACTGG 8 cut(s) 192, 325, 472, 598, 665, 1009, 1186, 1769
BseRI GAGGAG 1 cut(s) 2549
BseXI GCAGC 6 cut(s) 963, 1169, 1306, 1377, 1706, 2017
BsgI GTGCAG 2 cut(s) 1276, 1705
Bsh1236I CGCG 1 cut(s) 1445
BshFI GGCC 4 cut(s) 1750, 2167, 2196, 2570
BshNI GGYRCC 1 cut(s) 344
BshVI ATCGAT 1 cut(s) 399
BsiHKAI GWGCWC 3 cut(s) 788, 1406, 2037
BsiHKCI CYCGRG 3 cut(s) 708, 1323, 2451
BsiSI CCGG 6 cut(s) 893, 974, 1653, 1709, 2642, 2903
BslFI GGGAC 2 cut(s) 1494, 2799
BslI CCNNNNNNNGG 7 cut(s) 593, 1192, 1257, 1500, 1606, 1775, 2487
BsmAI GTCTC 8 cut(s) 288, 1017, 1029, 1053, 1353, 1902, 1975, 2771
BsmBI CGTCTC 1 cut(s) 1975
BsmFI GGGAC 2 cut(s) 1494, 2799
BsmI GAATGC 2 cut(s) 381, 1163
BsnI GGCC 4 cut(s) 1750, 2167, 2196, 2570
BsoBI CYCGRG 3 cut(s) 708, 1323, 2451
Bsp1286I GDGCHC 4 cut(s) 788, 1406, 2037, 2883
BspACI CCGC 7 cut(s) 482, 1209, 1455, 1821, 2003, 2425, 2721
BspANI GGCC 4 cut(s) 1750, 2167, 2196, 2570
BspCNI CTCAG 4 cut(s) 233, 1055, 1392, 2319
BspDI ATCGAT 1 cut(s) 399
BspFNI CGCG 1 cut(s) 1445
BspHI TCATGA 1 cut(s) 1309
BspLI GGNNCC 6 cut(s) 346, 486, 891, 1482, 1701, 2623
BspMAI CTGCAG 2 cut(s) 1367, 1742
BspPI GGATC 8 cut(s) 125, 157, 479, 492, 1667, 2189, 2498, 2894
BspT107I GGYRCC 1 cut(s) 344
BspTI CTTAAG 2 cut(s) 1268, 1435
BsrBI CCGCTC 1 cut(s) 1821
BsrDI GCAATG 2 cut(s) 1314, 1456
BsrI ACTGG 8 cut(s) 192, 325, 472, 598, 665, 1009, 1186, 1769
BssECI CCNNGG 5 cut(s) 530, 707, 1477, 2188, 2595
BssSI CACGAG 1 cut(s) 2044
Bst2BI CACGAG 1 cut(s) 2044
Bst2UI CCWGG 8 cut(s) 531, 678, 996, 1193, 1478, 2190, 2482, 2572
Bst4CI ACNGT 6 cut(s) 274, 751, 790, 1890, 2614, 2948
Bst6I CTCTTC 2 cut(s) 1287, 3028
BstAFI CTTAAG 2 cut(s) 1268, 1435
BstBAI YACGTR 1 cut(s) 1170
BstC8I GCNNGC 4 cut(s) 44, 1447, 1717, 1939
BstDEI CTNAG 7 cut(s) 220, 1042, 1400, 1729, 1977, 2306, 2771
BstENI CCTNNNNNAGG 2 cut(s) 1255, 1498
BstF5I GGATG 5 cut(s) 540, 1055, 1664, 2536, 2662
BstFNI CGCG 1 cut(s) 1445
BstMAI GTCTC 8 cut(s) 288, 1017, 1029, 1053, 1353, 1902, 1975, 2771
BstMWI GCNNNNNNNGC 6 cut(s) 1179, 1188, 1328, 1374, 1451, 3009
BstNI CCWGG 8 cut(s) 531, 678, 996, 1193, 1478, 2190, 2482, 2572
BstNSI RCATGY 5 cut(s) 46, 1941, 2359, 2407, 2638
BstPAI GACNNNNGTC 1 cut(s) 1305
BstSCI CCNGG 9 cut(s) 529, 676, 972, 994, 1191, 1476, 2188, 2480, 2570
BstSFI CTRYAG 3 cut(s) 1363, 1738, 2118
BstUI CGCG 1 cut(s) 1445
BstV1I GCAGC 6 cut(s) 963, 1169, 1306, 1377, 1706, 2017
BstV2I GAAGAC 3 cut(s) 882, 1229, 1740
BstX2I RGATCY 3 cut(s) 484, 2181, 2899
BstYI RGATCY 3 cut(s) 484, 2181, 2899
Bsu15I ATCGAT 1 cut(s) 399
BsuRI GGCC 4 cut(s) 1750, 2167, 2196, 2570
BsuTUI ATCGAT 1 cut(s) 399
BtsCI GGATG 5 cut(s) 540, 1055, 1664, 2536, 2662
BtsI GCAGTG 2 cut(s) 890, 928
BtsIMutI CAGTG 7 cut(s) 318, 747, 786, 890, 928, 1193, 2953
Cac8I GCNNGC 4 cut(s) 44, 1447, 1717, 1939
CciI TCATGA 1 cut(s) 1309
Cfr13I GGNCC 3 cut(s) 674, 1481, 2165
ClaI ATCGAT 1 cut(s) 399
CseI GACGC 1 cut(s) 2123
CsiI ACCWGGT 1 cut(s) 676
Csp6I GTAC 8 cut(s) 71, 345, 1432, 1524, 1839, 2084, 2353, 2891
CviQI GTAC 8 cut(s) 71, 345, 1432, 1524, 1839, 2084, 2353, 2891
DdeI CTNAG 7 cut(s) 220, 1042, 1400, 1729, 1977, 2306, 2771
EaeI YGGCCR 2 cut(s) 1748, 2568
Eam1104I CTCTTC 2 cut(s) 1287, 3028
EarI CTCTTC 2 cut(s) 1287, 3028
Ecl136II GAGCTC 1 cut(s) 2035
Eco24I GRGCYC 2 cut(s) 2037, 2883
Eco32I GATATC 1 cut(s) 837
Eco47I GGWCC 2 cut(s) 674, 1481
Eco53kI GAGCTC 1 cut(s) 2035
Eco57I CTGAAG 2 cut(s) 875, 2214
Eco72I CACGTG 1 cut(s) 1170
Eco88I CYCGRG 3 cut(s) 708, 1323, 2451
EcoICRI GAGCTC 1 cut(s) 2035
EcoNI CCTNNNNNAGG 2 cut(s) 1255, 1498
EcoRII CCWGG 8 cut(s) 529, 676, 994, 1191, 1476, 2188, 2480, 2570
EcoRV GATATC 1 cut(s) 837
EcoT22I ATGCAT 2 cut(s) 1943, 2653
EcoT38I GRGCYC 2 cut(s) 2037, 2883
Esp3I CGTCTC 1 cut(s) 1975
FalI AAGNNNNNCTT 2 cut(s) 2168, 2200
FaqI GGGAC 2 cut(s) 1494, 2799
FauNDI CATATG 3 cut(s) 67, 248, 1204
FbaI TGATCA 2 cut(s) 2389, 2743
Fnu4HI GCNGC 9 cut(s) 952, 1183, 1209, 1320, 1366, 1455, 1720, 1822, 2006
FokI GGATG 5 cut(s) 547, 1062, 1651, 2543, 2669
FriOI GRGCYC 2 cut(s) 2037, 2883
Fsp4HI GCNGC 9 cut(s) 952, 1183, 1209, 1320, 1366, 1455, 1720, 1822, 2006
FspBI CTAG 9 cut(s) 108, 614, 795, 1016, 1407, 1572, 2111, 2708, 3009
GluI GCNGC 9 cut(s) 952, 1183, 1209, 1320, 1366, 1455, 1720, 1822, 2006
GsuI CTGGAG 4 cut(s) 192, 342, 1053, 2211
HaeIII GGCC 4 cut(s) 1750, 2167, 2196, 2570
HapII CCGG 6 cut(s) 893, 974, 1653, 1709, 2642, 2903
HgaI GACGC 1 cut(s) 2123
HincII GTYRAC 2 cut(s) 477, 561
HindII GTYRAC 2 cut(s) 477, 561
HindIII AAGCTT 2 cut(s) 2144, 2368
HpaII CCGG 6 cut(s) 893, 974, 1653, 1709, 2642, 2903
HphI GGTGA 5 cut(s) 83, 482, 595, 692, 844
Hpy166II GTNNAC 5 cut(s) 477, 561, 1144, 1526, 2173
Hpy8I GTNNAC 5 cut(s) 477, 561, 1144, 1526, 2173
HpyAV CCTTC 6 cut(s) 106, 149, 616, 1606, 1686, 3059
HpyCH4III ACNGT 6 cut(s) 274, 751, 790, 1890, 2614, 2948
HpyCH4IV ACGT 3 cut(s) 409, 1169, 2520
HpyF10VI GCNNNNNNNGC 6 cut(s) 1179, 1188, 1328, 1374, 1451, 3009
HpyF3I CTNAG 7 cut(s) 220, 1042, 1400, 1729, 1977, 2306, 2771
HpySE526I ACGT 3 cut(s) 409, 1169, 2520
KpnI GGTACC 1 cut(s) 348
Ksp22I TGATCA 2 cut(s) 2389, 2743
LmnI GCTCC 3 cut(s) 570, 1699, 1818
Lsp1109I GCAGC 6 cut(s) 963, 1169, 1306, 1377, 1706, 2017
LweI GCATC 4 cut(s) 525, 1040, 1950, 2412
MabI ACCWGGT 1 cut(s) 676
MaeI CTAG 9 cut(s) 108, 614, 795, 1016, 1407, 1572, 2111, 2708, 3009
MaeII ACGT 3 cut(s) 409, 1169, 2520
MaeIII GTNAC 8 cut(s) 548, 715, 751, 790, 2048, 2241, 2630, 2932
MbiI CCGCTC 1 cut(s) 1821
MfeI CAATTG 2 cut(s) 2133, 2413
MflI RGATCY 3 cut(s) 484, 2181, 2899
MhlI GDGCHC 4 cut(s) 788, 1406, 2037, 2883
MlsI TGGCCA 2 cut(s) 1750, 2570
MluNI TGGCCA 2 cut(s) 1750, 2570
MlyI GAGTC 5 cut(s) 259, 1055, 2034, 2298, 2781
MmeI TCCRAC 5 cut(s) 293, 339, 2560, 2580, 2790
Mox20I TGGCCA 2 cut(s) 1750, 2570
Mph1103I ATGCAT 2 cut(s) 1943, 2653
MscI TGGCCA 2 cut(s) 1750, 2570
Msp20I TGGCCA 2 cut(s) 1750, 2570
MspA1I CMGCKG 5 cut(s) 170, 482, 954, 1182, 2721
MspCI CTTAAG 2 cut(s) 1268, 1435
MspI CCGG 6 cut(s) 893, 974, 1653, 1709, 2642, 2903
MspR9I CCNGG 9 cut(s) 531, 678, 974, 996, 1193, 1478, 2190, 2482, 2572
MunI CAATTG 2 cut(s) 2133, 2413
Mva1269I GAATGC 2 cut(s) 381, 1163
MvaI CCWGG 8 cut(s) 531, 678, 996, 1193, 1478, 2190, 2482, 2572
MvnI CGCG 1 cut(s) 1445
MwoI GCNNNNNNNGC 6 cut(s) 1179, 1188, 1328, 1374, 1451, 3009
NciI CCSGG 1 cut(s) 974
NdeI CATATG 3 cut(s) 67, 248, 1204
NlaIV GGNNCC 6 cut(s) 346, 486, 891, 1482, 1701, 2623
NmuCI GTSAC 1 cut(s) 2048
NsiI ATGCAT 2 cut(s) 1943, 2653
NspI RCATGY 5 cut(s) 46, 1941, 2359, 2407, 2638
PaeI GCATGC 2 cut(s) 46, 1941
PaeR7I CTCGAG 2 cut(s) 1323, 2451
PagI TCATGA 1 cut(s) 1309
PciI ACATGT 1 cut(s) 2634
PctI GAATGC 2 cut(s) 381, 1163
PfeI GAWTC 6 cut(s) 192, 1346, 1533, 1568, 2375, 2477
PflMI CCANNNNNTGG 1 cut(s) 593
PkrI GCNGC 9 cut(s) 953, 1184, 1210, 1321, 1367, 1456, 1721, 1823, 2007
PleI GAGTC 5 cut(s) 259, 1055, 2033, 2298, 2781
PmaCI CACGTG 1 cut(s) 1170
PmlI CACGTG 1 cut(s) 1170
PpsI GAGTC 5 cut(s) 259, 1055, 2033, 2298, 2781
Ppu21I YACGTR 1 cut(s) 1170
PscI ACATGT 1 cut(s) 2634
PshAI GACNNNNGTC 1 cut(s) 1305
PshBI ATTAAT 2 cut(s) 336, 1461
PsiI TTATAA 2 cut(s) 1508, 2861
Psp124BI GAGCTC 1 cut(s) 2037
Psp1406I AACGTT 1 cut(s) 2520
Psp6I CCWGG 8 cut(s) 529, 676, 994, 1191, 1476, 2188, 2480, 2570
PspCI CACGTG 1 cut(s) 1170
PspGI CCWGG 8 cut(s) 529, 676, 994, 1191, 1476, 2188, 2480, 2570
PspN4I GGNNCC 6 cut(s) 346, 486, 891, 1482, 1701, 2623
PspPI GGNCC 3 cut(s) 674, 1481, 2165
PspXI VCTCGAGB 2 cut(s) 1323, 2451
PstI CTGCAG 2 cut(s) 1367, 1742
PsuI RGATCY 3 cut(s) 484, 2181, 2899
PvuII CAGCTG 3 cut(s) 170, 954, 1182
RsaI GTAC 8 cut(s) 72, 346, 1433, 1525, 1840, 2085, 2354, 2892
RsaNI GTAC 8 cut(s) 71, 345, 1432, 1524, 1839, 2084, 2353, 2891
SacI GAGCTC 1 cut(s) 2037
SatI GCNGC 9 cut(s) 952, 1183, 1209, 1320, 1366, 1455, 1720, 1822, 2006
Sau96I GGNCC 3 cut(s) 674, 1481, 2165
SchI GAGTC 5 cut(s) 259, 1055, 2034, 2298, 2781
ScrFI CCNGG 9 cut(s) 531, 678, 974, 996, 1193, 1478, 2190, 2482, 2572
SduI GDGCHC 4 cut(s) 788, 1406, 2037, 2883
SexAI ACCWGGT 1 cut(s) 676
SfaNI GCATC 4 cut(s) 525, 1040, 1950, 2412
SfcI CTRYAG 3 cut(s) 1363, 1738, 2118
Sfr274I CTCGAG 2 cut(s) 1323, 2451
SinI GGWCC 2 cut(s) 674, 1481
SlaI CTCGAG 2 cut(s) 1323, 2451
SmlI CTYRAG 6 cut(s) 434, 1268, 1323, 1435, 1842, 2451
SmoI CTYRAG 6 cut(s) 434, 1268, 1323, 1435, 1842, 2451
SpeI ACTAGT 1 cut(s) 794
SphI GCATGC 2 cut(s) 46, 1941
SsiI CCGC 7 cut(s) 482, 1209, 1455, 1821, 2003, 2425, 2721
SspMI CTAG 9 cut(s) 108, 614, 795, 1016, 1407, 1572, 2111, 2708, 3009
SstI GAGCTC 1 cut(s) 2037
StyD4I CCNGG 9 cut(s) 529, 676, 972, 994, 1191, 1476, 2188, 2480, 2570
TaaI ACNGT 6 cut(s) 274, 751, 790, 1890, 2614, 2948
TaiI ACGT 3 cut(s) 412, 1172, 2523
TaqI TCGA 4 cut(s) 399, 1324, 2010, 2452
TatI WGTACW 5 cut(s) 70, 1431, 1523, 1838, 2352
TauI GCSGC 3 cut(s) 1211, 1457, 1824
TfiI GAWTC 6 cut(s) 192, 1346, 1533, 1568, 2375, 2477
TscAI CASTG 7 cut(s) 325, 754, 793, 890, 928, 1193, 2953
TseFI GTSAC 1 cut(s) 2048
TseI GCWGC 6 cut(s) 951, 1182, 1319, 1365, 1719, 2005
Tsp45I GTSAC 1 cut(s) 2048
TspGWI ACGGA 2 cut(s) 1062, 3010
TspRI CASTG 7 cut(s) 325, 754, 793, 890, 928, 1193, 2953
Van91I CCANNNNNTGG 1 cut(s) 593
Vha464I CTTAAG 2 cut(s) 1268, 1435
VpaK11BI GGWCC 2 cut(s) 674, 1481
VspI ATTAAT 2 cut(s) 336, 1461
XagI CCTNNNNNAGG 2 cut(s) 1255, 1498
XapI RAATTY 9 cut(s) 179, 646, 733, 1466, 1642, 1660, 1807, 2662, 2855
XbaI TCTAGA 3 cut(s) 1015, 1571, 2707
XceI RCATGY 5 cut(s) 46, 1941, 2359, 2407, 2638
XcmI CCANNNNNNNNNTGG 1 cut(s) 276
XhoI CTCGAG 2 cut(s) 1323, 2451
XspI CTAG 9 cut(s) 108, 614, 795, 1016, 1407, 1572, 2111, 2708, 3009
Zsp2I ATGCAT 2 cut(s) 1943, 2653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.