Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002806

Physical Location & Seq

Genomic Coordinates Reverse (-)

1326019 .. 1328336

Gene Structure 2318 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0017000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1185 bp

ATGCCCGAGTCAAACAACCATAACTCACCTTCCCCTTCAACTCAAGCTAGTAGAAGATCATCGTCATCTTCATCATGGCCTTTGAACTTTCTCTTCTTCTCAATACTGGTTCCTGTGGCGGCAGCTCTGCTAATCCTCTACCAGCTCGACTCGTTCGAACCGGCTCCTCTGCCGCTTCACGAGTTAAGCCACCGAGTCACAGCTGCCCCAGCGCGTAATGCTCACATGCTCAAAGGGTCGGAGTTTATAGGTGTTGGGGCTTTAATGGCACCGGAAGACATTGCTTATGATTCAAAGTCGGGACTCATTTACACGGGCTGTGCGGACGGGTGGGTCAAGCGAGTCACGTTGAACGAGTCGGCTGCTGACTCGGTGGTTGAGAACTGGGTTAACACCGGCGGGAGACCGCTCGGACTCGCTCACGGTCATGACGGTCAGCTCTTGGTCGCGGATACAGAGAAGGGACTACTGAGTATAACTGAGGACGGAGAAGTGGAGCTGTTGACTGATGAGGCTGAGGGTGTGAAATTCAAGCTTACAGATGCTGTGGATGTAGCAAAAGATGGCATGATTTACTTCACAGATGCTTCGTATATGTACAGCTTAAAAGACTTCATCTTGGACCTTTTGGAGGGCAAACCCCATGGTAGATTTGTCAGCTACGATCCAACTATGAAAGAGACCAAAGTGCTAGTCCCCGACCTCTACTTTGCTAATGGAGTTGCAGTCTCTCCGGATCAGAATTTTGTGATCTTCTGTGAAAGTGTCATGAGAAGATGTAAAAAGTACTACCTGCAAGGCGAGAAGAAAGGAAACGTAGAGAACTTCATTGACAACTTGCCGGGCCCCCCTGATAATATTCGATATGATGGAGAAGGCCATTACTGGATTGCATTTCCTACGGAGATTACATATTCTTGGAATCTAGCAATTAGGTACCCTTTTATTCGAAAATGGCTGGCAATCATGGAGAAGTATACAGCAGGAAGACCACATATGGAGAAAAATTCTGGTGTAATGGCTGTTAATTTGGAAGGGGAACCTATTGCCCACTATTTGGATCTAGGCTTATCAGCCATTTCAAGTGGGATCAAGATCGGAAATTACCTATACTGCGGTTCAATTATCTATCCATACATTATCCGCTTCGATCTGGAACGGCATCCTGCACACGCCGCTACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0008144 GO:0016020 GO:0016208 GO:0017076 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0036094 GO:0043167 GO:0043168 GO:0043169 GO:0044464 GO:0071944 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Usp

Protein Analysis

394

Amino Acids

43.68

Weight (kDa)

5.32

Isoelectric Point (pI)

40.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SSL_N	PF20067	77 - 115	2.9e-06	Strictosidine synthase-like, N-terminal
SGL	PF08450	130 - 299	4.7e-14	SMP-30/Gluconolactonase/LRE-like region
Str_synth	PF03088	181 - 267	9.7e-34	Strictosidine synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002806)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62550
fragaria_vesca	FvH4_5g39370 FvH4_6g07300 FvH4_6g07300 FvH4_6g07300 FvH4_6g07300
malus_domestica	MD03G1296200.v1.1 MD04G1194600.v1.1 MD11G1315600.v1.1 MD12G1206900.v1.1
prunus_persica	Prupe.6G314600_v2.0.a1 Prupe.6G314600_v2.0.a1 Prupe.8G271100_v2.0.a1
pyrus_communis	pycom04g17190 pycom12g19480
rosa_chinensis	RchiOBHm_Chr3g0456911 RchiOBHm_Chr7g0241661
rosa_laevigata	RLG00000000556 RLG00000025265 RLG00000025268
rosa_multiflora	Rmu_sc0000133.1_g000003 Rmu_sc0002268.1_g000009 Rmu_sc0019791.1_g000001 Rmu_sc0026340.1_g000004
rosa_roxburghii	Rroxscaffold_3G00218840 Rroxscaffold_6G00422380
rosa_rugosa	Rorug03G0017000 Rorug03G0017000 Rorug07G0346000
rosa_samantha	Rh3AG077300 Rh3BG079100 Rh3CG079000 Rh3DG081000 Rh7AG500600 Rh7BG471700 Rh7CG517000 Rh7DG485500
rosa_wichuraiana	Rw3G006630 Rw7G042290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	332
Acc36I	ACCTGC	1 cut(s)	801
Acc65I	GGTACC	1 cut(s)	936
AccB1I	GGYRCC	2 cut(s)	268, 936
AccB7I	CCANNNNNTGG	1 cut(s)	1057
AccBSI	CCGCTC	1 cut(s)	409
AccI	GTMKAC	1 cut(s)	977
AccII	CGCG	2 cut(s)	214, 449
AccIII	TCCGGA	1 cut(s)	733
AciI	CCGC	9 cut(s)	119, 173, 323, 399, 407, 449, 1116, 1144, 1176
AclWI	GGATC	4 cut(s)	659, 744, 1068, 1097
AcsI	RAATTY	3 cut(s)	527, 742, 1006
AfaI	GTAC	3 cut(s)	599, 788, 938
AfiI	CCNNNNNNNGG	2 cut(s)	631, 1057
AgsI	TTSAA	7 cut(s)	39, 85, 294, 352, 532, 1083, 1122
AluBI	AGCT	9 cut(s)	47, 125, 145, 203, 439, 499, 535, 603, 660
AluI	AGCT	9 cut(s)	47, 125, 145, 203, 439, 499, 535, 603, 660
Alw26I	GTCTC	3 cut(s)	397, 674, 733
AlwI	GGATC	4 cut(s)	659, 744, 1068, 1097
AlwNI	CAGNNNCTG	1 cut(s)	545
Ama87I	CYCGRG	1 cut(s)	5
Aor13HI	TCCGGA	1 cut(s)	733
AoxI	GGCC	3 cut(s)	77, 844, 877
ApaI	GGGCCC	1 cut(s)	848
ApeKI	GCWGC	3 cut(s)	122, 203, 362
ApoI	RAATTY	3 cut(s)	527, 742, 1006
ArsI	GACNNNNNNTTYG	4 cut(s)	678, 692, 710, 724
Asp718I	GGTACC	1 cut(s)	936
AspLEI	GCGC	1 cut(s)	214
AspS9I	GGNCC	3 cut(s)	622, 844, 845
AsuC2I	CCSGG	1 cut(s)	843
AsuHPI	GGTGA	1 cut(s)	18
AsuII	TTCGAA	2 cut(s)	156, 949
AvaI	CYCGRG	1 cut(s)	5
AvaII	GGWCC	1 cut(s)	622
BaeGI	GKGCMC	1 cut(s)	848
BanI	GGYRCC	2 cut(s)	268, 936
BanII	GRGCYC	1 cut(s)	848
BauI	CACGAG	1 cut(s)	179
BbsI	GAAGAC	2 cut(s)	282, 994
BbvCI	CCTCAGC	1 cut(s)	516
BbvI	GCAGC	3 cut(s)	134, 190, 349
BccI	CCATC	2 cut(s)	557, 863
BceAI	ACGGC	1 cut(s)	1175
BcgI	CGANNNNNNTGC	2 cut(s)	344, 378
BciVI	GTATCC	1 cut(s)	445
BcnI	CCSGG	1 cut(s)	843
BcoDI	GTCTC	3 cut(s)	397, 674, 733
BfaI	CTAG	4 cut(s)	48, 692, 926, 1064
BfuAI	ACCTGC	1 cut(s)	801
BfuI	GTATCC	1 cut(s)	445
BisI	GCNGC	6 cut(s)	120, 123, 173, 204, 363, 1176
BlsI	GCNGC	6 cut(s)	121, 124, 174, 205, 364, 1177
BmcAI	AGTACT	1 cut(s)	788
Bme1390I	CCNGG	1 cut(s)	843
Bme18I	GGWCC	1 cut(s)	622
BmeT110I	CYCGRG	1 cut(s)	5
BmgT120I	GGNCC	3 cut(s)	622, 844, 845
BmiI	GGNNCC	7 cut(s)	111, 165, 270, 846, 847, 938, 1041
BmrFI	CCNGG	1 cut(s)	843
BmrI	ACTGGG	1 cut(s)	394
BmsI	GCATC	3 cut(s)	532, 574, 1171
BmuI	ACTGGG	1 cut(s)	394
BpiI	GAAGAC	2 cut(s)	282, 994
Bpu10I	CCTNAGC	1 cut(s)	516
Bpu14I	TTCGAA	2 cut(s)	156, 949
BpuEI	CTTGAG	1 cut(s)	27
BpuMI	CCSGG	1 cut(s)	843
BsaBI	GATNNNNATC	1 cut(s)	1094
BsaI	GGTCTC	2 cut(s)	397, 674
BsaJI	CCNNGG	1 cut(s)	643
BsaWI	WCCGGW	2 cut(s)	271, 733
BsaXI	ACNNNNNCTCC	2 cut(s)	711, 741
Bsc4I	CCNNNNNNNGG	2 cut(s)	631, 1057
Bse118I	RCCGGY	2 cut(s)	160, 395
Bse1I	ACTGG	3 cut(s)	111, 389, 890
Bse3DI	GCAATG	1 cut(s)	279
Bse8I	GATNNNNATC	1 cut(s)	1094
BseAI	TCCGGA	1 cut(s)	733
BseDI	CCNNGG	1 cut(s)	643
BseGI	GGATG	2 cut(s)	556, 1162
BseJI	GATNNNNATC	1 cut(s)	1094
BseLI	CCNNNNNNNGG	2 cut(s)	631, 1057
BseMI	GCAATG	1 cut(s)	279
BseMII	CTCAG	3 cut(s)	461, 471, 507
BseNI	ACTGG	3 cut(s)	111, 389, 890
BseRI	GAGGAG	1 cut(s)	156
BseSI	GKGCMC	1 cut(s)	848
BseXI	GCAGC	3 cut(s)	134, 190, 349
BseYI	CCCAGC	1 cut(s)	208
BsgI	GTGCAG	1 cut(s)	1152
Bsh1236I	CGCG	2 cut(s)	214, 449
BshFI	GGCC	3 cut(s)	79, 846, 879
BshNI	GGYRCC	2 cut(s)	268, 936
BsiHKCI	CYCGRG	1 cut(s)	5
BsiSI	CCGG	5 cut(s)	161, 272, 396, 734, 842
BslFI	GGGAC	3 cut(s)	315, 477, 680
BslI	CCNNNNNNNGG	2 cut(s)	631, 1057
BsmAI	GTCTC	3 cut(s)	397, 674, 733
BsmFI	GGGAC	3 cut(s)	315, 477, 680
BsnI	GGCC	3 cut(s)	79, 846, 879
Bso31I	GGTCTC	2 cut(s)	397, 674
BsoBI	CYCGRG	1 cut(s)	5
Bsp119I	TTCGAA	2 cut(s)	156, 949
Bsp120I	GGGCCC	1 cut(s)	844
Bsp1286I	GDGCHC	1 cut(s)	848
Bsp13I	TCCGGA	1 cut(s)	733
Bsp1407I	TGTACA	1 cut(s)	597
Bsp143I	GATC	8 cut(s)	56, 664, 736, 750, 1060, 1089, 1095, 1150
Bsp19I	CCATGG	1 cut(s)	643
BspACI	CCGC	9 cut(s)	119, 173, 323, 399, 407, 449, 1116, 1144, 1176
BspANI	GGCC	3 cut(s)	79, 846, 879
BspCNI	CTCAG	3 cut(s)	462, 472, 508
BspEI	TCCGGA	1 cut(s)	733
BspFNI	CGCG	2 cut(s)	214, 449
BspHI	TCATGA	2 cut(s)	427, 768
BspLI	GGNNCC	7 cut(s)	111, 165, 270, 846, 847, 938, 1041
BspMI	ACCTGC	1 cut(s)	801
BspPI	GGATC	4 cut(s)	659, 744, 1068, 1097
BspT104I	TTCGAA	2 cut(s)	156, 949
BspT107I	GGYRCC	2 cut(s)	268, 936
BspTNI	GGTCTC	2 cut(s)	397, 674
BsrBI	CCGCTC	1 cut(s)	409
BsrDI	GCAATG	1 cut(s)	279
BsrFI	RCCGGY	2 cut(s)	160, 395
BsrGI	TGTACA	1 cut(s)	597
BsrI	ACTGG	3 cut(s)	111, 389, 890
BssAI	RCCGGY	2 cut(s)	160, 395
BssECI	CCNNGG	1 cut(s)	643
BssMI	GATC	8 cut(s)	56, 664, 736, 750, 1060, 1089, 1095, 1150
BssNAI	GTATAC	1 cut(s)	978
BssSI	CACGAG	1 cut(s)	179
BssT1I	CCWWGG	1 cut(s)	643
Bst1107I	GTATAC	1 cut(s)	978
Bst2BI	CACGAG	1 cut(s)	179
Bst4CI	ACNGT	2 cut(s)	425, 434
Bst6I	CTCTTC	1 cut(s)	98
BstAUI	TGTACA	1 cut(s)	597
BstBI	TTCGAA	2 cut(s)	156, 949
BstC8I	GCNNGC	1 cut(s)	960
BstDEI	CTNAG	3 cut(s)	470, 480, 516
BstDSI	CCRYGG	1 cut(s)	643
BstENI	CCTNNNNNAGG	1 cut(s)	629
BstF5I	GGATG	2 cut(s)	556, 1162
BstFNI	CGCG	2 cut(s)	214, 449
BstHHI	GCGC	1 cut(s)	214
BstKTI	GATC	8 cut(s)	59, 667, 739, 753, 1063, 1092, 1098, 1153
BstMAI	GTCTC	3 cut(s)	397, 674, 733
BstMBI	GATC	8 cut(s)	56, 664, 736, 750, 1060, 1089, 1095, 1150
BstMWI	GCNNNNNNNGC	4 cut(s)	209, 218, 266, 1175
BstNSI	RCATGY	1 cut(s)	229
BstSCI	CCNGG	1 cut(s)	841
BstSLI	GKGCMC	1 cut(s)	848
BstUI	CGCG	2 cut(s)	214, 449
BstV1I	GCAGC	3 cut(s)	134, 190, 349
BstV2I	GAAGAC	2 cut(s)	282, 994
BstX2I	RGATCY	1 cut(s)	1060
BstYI	RGATCY	1 cut(s)	1060
BstZ17I	GTATAC	1 cut(s)	978
BsuI	GTATCC	1 cut(s)	445
BsuRI	GGCC	3 cut(s)	79, 846, 879
BtgI	CCRYGG	1 cut(s)	643
BtsCI	GGATG	2 cut(s)	556, 1162
BveI	ACCTGC	1 cut(s)	801
Cac8I	GCNNGC	1 cut(s)	960
CaiI	CAGNNNCTG	1 cut(s)	545
CciI	TCATGA	2 cut(s)	427, 768
CfoI	GCGC	1 cut(s)	214
Cfr10I	RCCGGY	2 cut(s)	160, 395
Cfr13I	GGNCC	3 cut(s)	622, 844, 845
Csp6I	GTAC	3 cut(s)	598, 787, 937
CviAII	CATG	8 cut(s)	75, 226, 428, 568, 644, 769, 967, 1182
CviQI	GTAC	3 cut(s)	598, 787, 937
DdeI	CTNAG	3 cut(s)	470, 480, 516
DpnI	GATC	8 cut(s)	58, 666, 738, 752, 1062, 1091, 1097, 1152
DpnII	GATC	8 cut(s)	56, 664, 736, 750, 1060, 1089, 1095, 1150
DrdI	GACNNNNNNGTC	1 cut(s)	332
DseDI	GACNNNNNNGTC	1 cut(s)	332
Eam1104I	CTCTTC	1 cut(s)	98
EarI	CTCTTC	1 cut(s)	98
Eco130I	CCWWGG	1 cut(s)	643
Eco24I	GRGCYC	1 cut(s)	848
Eco31I	GGTCTC	2 cut(s)	397, 674
Eco47I	GGWCC	1 cut(s)	622
Eco88I	CYCGRG	1 cut(s)	5
EcoNI	CCTNNNNNAGG	1 cut(s)	629
EcoO109I	RGGNCCY	1 cut(s)	845
EcoT14I	CCWWGG	1 cut(s)	643
EcoT38I	GRGCYC	1 cut(s)	848
ErhI	CCWWGG	1 cut(s)	643
FaeI	CATG	8 cut(s)	78, 229, 431, 571, 647, 772, 970, 1185
FaqI	GGGAC	3 cut(s)	315, 477, 680
FatI	CATG	8 cut(s)	74, 225, 427, 567, 643, 768, 966, 1181
FauI	CCCGC	1 cut(s)	392
FauNDI	CATATG	1 cut(s)	996
FblI	GTMKAC	1 cut(s)	977
Fnu4HI	GCNGC	6 cut(s)	120, 123, 173, 204, 363, 1176
FokI	GGATG	2 cut(s)	563, 1149
FriOI	GRGCYC	1 cut(s)	848
Fsp4HI	GCNGC	6 cut(s)	120, 123, 173, 204, 363, 1176
FspBI	CTAG	4 cut(s)	48, 692, 926, 1064
GlaI	GCGC	1 cut(s)	213
GluI	GCNGC	6 cut(s)	120, 123, 173, 204, 363, 1176
GsaI	CCCAGC	1 cut(s)	212
HaeIII	GGCC	3 cut(s)	79, 846, 879
HapII	CCGG	5 cut(s)	161, 272, 396, 734, 842
HhaI	GCGC	1 cut(s)	214
Hin1II	CATG	8 cut(s)	78, 229, 431, 571, 647, 772, 970, 1185
Hin6I	GCGC	1 cut(s)	212
HinP1I	GCGC	1 cut(s)	212
HincII	GTYRAC	2 cut(s)	391, 504
HindII	GTYRAC	2 cut(s)	391, 504
HindIII	AAGCTT	1 cut(s)	533
HpaI	GTTAAC	1 cut(s)	391
HpaII	CCGG	5 cut(s)	161, 272, 396, 734, 842
HphI	GGTGA	1 cut(s)	18
Hpy166II	GTNNAC	3 cut(s)	391, 504, 978
Hpy188I	TCNGA	4 cut(s)	241, 413, 741, 1100
Hpy188III	TCNNGA	7 cut(s)	179, 300, 428, 734, 769, 1093, 1154
Hpy8I	GTNNAC	3 cut(s)	391, 504, 978
HpyAV	CCTTC	5 cut(s)	39, 45, 454, 869, 1028
HpyCH4III	ACNGT	2 cut(s)	425, 434
HpyCH4IV	ACGT	2 cut(s)	347, 816
HpyCH4V	TGCA	4 cut(s)	725, 796, 893, 1169
HpyF10VI	GCNNNNNNNGC	4 cut(s)	209, 218, 266, 1175
HpyF3I	CTNAG	3 cut(s)	470, 480, 516
HpySE526I	ACGT	2 cut(s)	347, 816
Hsp92II	CATG	8 cut(s)	78, 229, 431, 571, 647, 772, 970, 1185
HspAI	GCGC	1 cut(s)	212
Kpn2I	TCCGGA	1 cut(s)	733
KpnI	GGTACC	1 cut(s)	940
KspAI	GTTAAC	1 cut(s)	391
Kzo9I	GATC	8 cut(s)	56, 664, 736, 750, 1060, 1089, 1095, 1150
LmnI	GCTCC	2 cut(s)	169, 496
Lsp1109I	GCAGC	3 cut(s)	134, 190, 349
LweI	GCATC	3 cut(s)	532, 574, 1171
MaeI	CTAG	4 cut(s)	48, 692, 926, 1064
MaeII	ACGT	2 cut(s)	347, 816
MaeIII	GTNAC	2 cut(s)	196, 343
MalI	GATC	8 cut(s)	58, 666, 738, 752, 1062, 1091, 1097, 1152
MbiI	CCGCTC	1 cut(s)	409
MboI	GATC	8 cut(s)	56, 664, 736, 750, 1060, 1089, 1095, 1150
MboII	GAAGA	9 cut(s)	60, 66, 85, 88, 287, 745, 786, 817, 999
MflI	RGATCY	1 cut(s)	1060
MhlI	GDGCHC	1 cut(s)	848
MluCI	AATT	7 cut(s)	527, 742, 930, 1006, 1027, 1102, 1122
MlyI	GAGTC	8 cut(s)	17, 143, 204, 297, 351, 362, 365, 408
MmeI	TCCRAC	2 cut(s)	219, 692
MnlI	CCTC	7 cut(s)	146, 177, 475, 505, 511, 625, 713
MroI	TCCGGA	1 cut(s)	733
MseI	TTAA	5 cut(s)	185, 263, 390, 605, 1026
MslI	CAYNNNNRTG	1 cut(s)	426
MspA1I	CMGCKG	1 cut(s)	203
MspI	CCGG	5 cut(s)	161, 272, 396, 734, 842
MspR9I	CCNGG	1 cut(s)	843
MvnI	CGCG	2 cut(s)	214, 449
MwoI	GCNNNNNNNGC	4 cut(s)	209, 218, 266, 1175
NciI	CCSGG	1 cut(s)	843
NcoI	CCATGG	1 cut(s)	643
NdeI	CATATG	1 cut(s)	996
NdeII	GATC	8 cut(s)	56, 664, 736, 750, 1060, 1089, 1095, 1150
NlaIII	CATG	8 cut(s)	78, 229, 431, 571, 647, 772, 970, 1185
NlaIV	GGNNCC	7 cut(s)	111, 165, 270, 846, 847, 938, 1041
NmuCI	GTSAC	2 cut(s)	196, 343
NspI	RCATGY	1 cut(s)	229
NspV	TTCGAA	2 cut(s)	156, 949
PagI	TCATGA	2 cut(s)	427, 768
PcsI	WCGNNNNNNNCGW	1 cut(s)	153
PfeI	GAWTC	2 cut(s)	290, 922
PflMI	CCANNNNNTGG	1 cut(s)	1057
PkrI	GCNGC	6 cut(s)	121, 124, 174, 205, 364, 1177
PleI	GAGTC	8 cut(s)	16, 143, 203, 297, 350, 362, 364, 408
PpsI	GAGTC	8 cut(s)	16, 143, 203, 297, 350, 362, 364, 408
PspFI	CCCAGC	1 cut(s)	208
PspN4I	GGNNCC	7 cut(s)	111, 165, 270, 846, 847, 938, 1041
PspOMI	GGGCCC	1 cut(s)	844
PspPI	GGNCC	3 cut(s)	622, 844, 845
PstNI	CAGNNNCTG	1 cut(s)	545
PsuI	RGATCY	1 cut(s)	1060
PvuII	CAGCTG	1 cut(s)	203
RsaI	GTAC	3 cut(s)	599, 788, 938
RsaNI	GTAC	3 cut(s)	598, 787, 937
RseI	CAYNNNNRTG	1 cut(s)	426
SaqAI	TTAA	5 cut(s)	185, 263, 390, 605, 1026
SatI	GCNGC	6 cut(s)	120, 123, 173, 204, 363, 1176
Sau3AI	GATC	8 cut(s)	56, 664, 736, 750, 1060, 1089, 1095, 1150
Sau96I	GGNCC	3 cut(s)	622, 844, 845
ScaI	AGTACT	1 cut(s)	788
SchI	GAGTC	8 cut(s)	17, 143, 204, 297, 351, 362, 365, 408
ScrFI	CCNGG	1 cut(s)	843
SduI	GDGCHC	1 cut(s)	848
SfaNI	GCATC	3 cut(s)	532, 574, 1171
SfuI	TTCGAA	2 cut(s)	156, 949
SgrAI	CRCCGGYG	1 cut(s)	395
SinI	GGWCC	1 cut(s)	622
SmiMI	CAYNNNNRTG	1 cut(s)	426
SmlI	CTYRAG	1 cut(s)	42
SmoI	CTYRAG	1 cut(s)	42
Sse9I	AATT	7 cut(s)	527, 742, 930, 1006, 1027, 1102, 1122
SsiI	CCGC	9 cut(s)	119, 173, 323, 399, 407, 449, 1116, 1144, 1176
SspI	AATATT	1 cut(s)	859
SspMI	CTAG	4 cut(s)	48, 692, 926, 1064
StyD4I	CCNGG	1 cut(s)	841
StyI	CCWWGG	1 cut(s)	643
TaaI	ACNGT	2 cut(s)	425, 434
TaiI	ACGT	2 cut(s)	350, 819
TaqI	TCGA	5 cut(s)	147, 156, 862, 949, 1149
TasI	AATT	7 cut(s)	527, 742, 930, 1006, 1027, 1102, 1122
TatI	WGTACW	2 cut(s)	597, 786
TauI	GCSGC	3 cut(s)	122, 175, 1178
TfiI	GAWTC	2 cut(s)	290, 922
Tru1I	TTAA	5 cut(s)	185, 263, 390, 605, 1026
Tru9I	TTAA	5 cut(s)	185, 263, 390, 605, 1026
TseFI	GTSAC	2 cut(s)	196, 343
TseI	GCWGC	3 cut(s)	122, 203, 362
Tsp45I	GTSAC	2 cut(s)	196, 343
TspDTI	ATGAA	4 cut(s)	60, 604, 689, 817
TspGWI	ACGGA	2 cut(s)	501, 917
Van91I	CCANNNNNTGG	1 cut(s)	1057
VpaK11BI	GGWCC	1 cut(s)	622
XagI	CCTNNNNNAGG	1 cut(s)	629
XapI	RAATTY	3 cut(s)	527, 742, 1006
XceI	RCATGY	1 cut(s)	229
XmiI	GTMKAC	1 cut(s)	977
XspI	CTAG	4 cut(s)	48, 692, 926, 1064
ZrmI	AGTACT	1 cut(s)	788

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.