Rh7CG517000

Universal stress protein A-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0002806
Physical Location & Seq
Reverse (-)
69612403 .. 69613924
1522 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG517000.1

Sequence Viewer

Length: 339 bp
ATGTTATGTTATGCAGGATACATGTTTTCGAAGAACGATGTAGTAGCCACGATGGAGAAGTACGGGAATGACATGATAAATTCAGTGATGCAACGAGCTGAAGCTGTCTACAAAAACTTCAATGTCAATGCCAATGTAAGTATCGAGAGAGTGGTTGGCAGCGGAGACCCGAAAGATGTGATTTGCAATGCAGTCGAGAAGCTTCGAGCTGATACCTTGGTCATGGGATCCCATGGCTATGGTTTCTTCAAGAGGGCTCTTCTTGGAAGCGTGAGTGATTATTGTGCGAAACACGTCGAGTGTCCAGTAGTGATTGTCAAGCATCCTGACCACAAATAG

Protein Analysis

112

Amino Acids

12.41

Weight (kDa)

7.68

Isoelectric Point (pI)

19.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Usp PF00582 42 - 107 7.3e-22 Universal stress protein family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 108
AciI CCGC 1 cut(s) 162
AclWI GGATC 2 cut(s) 222, 235
AcsI RAATTY 1 cut(s) 79
AcuI CTGAAG 1 cut(s) 120
AfaI GTAC 1 cut(s) 62
AflIII ACRYGT 2 cut(s) 21, 292
AgsI TTSAA 2 cut(s) 121, 250
AjiI CACGTC 1 cut(s) 295
AluBI AGCT 4 cut(s) 98, 104, 202, 209
AluI AGCT 4 cut(s) 98, 104, 202, 209
Alw26I GTCTC 1 cut(s) 159
AlwI GGATC 2 cut(s) 222, 235
ApeKI GCWGC 1 cut(s) 159
ApoI RAATTY 1 cut(s) 79
AsuII TTCGAA 1 cut(s) 29
BaeI ACNNNNGTAYC 2 cut(s) 204, 237
BamHI GGATCC 1 cut(s) 227
BanII GRGCYC 1 cut(s) 259
BbvI GCAGC 1 cut(s) 171
BccI CCATC 1 cut(s) 46
BcgI CGANNNNNNTGC 2 cut(s) 175, 209
BciVI GTATCC 1 cut(s) 11
BcoDI GTCTC 1 cut(s) 159
BfuI GTATCC 1 cut(s) 11
BisI GCNGC 1 cut(s) 160
BlsI GCNGC 1 cut(s) 161
BmgBI CACGTC 1 cut(s) 295
BmiI GGNNCC 1 cut(s) 229
BmsI GCATC 2 cut(s) 78, 331
Bpu14I TTCGAA 1 cut(s) 29
BsaI GGTCTC 1 cut(s) 159
BsaJI CCNNGG 2 cut(s) 216, 232
Bse1I ACTGG 1 cut(s) 305
Bse3DI GCAATG 1 cut(s) 193
BseDI CCNNGG 2 cut(s) 216, 232
BseGI GGATG 1 cut(s) 322
BseMI GCAATG 1 cut(s) 193
BseNI ACTGG 1 cut(s) 305
BseXI GCAGC 1 cut(s) 171
BsmAI GTCTC 1 cut(s) 159
Bso31I GGTCTC 1 cut(s) 159
Bsp119I TTCGAA 1 cut(s) 29
Bsp1286I GDGCHC 1 cut(s) 259
Bsp143I GATC 1 cut(s) 227
Bsp19I CCATGG 1 cut(s) 232
BspACI CCGC 1 cut(s) 162
BspLI GGNNCC 1 cut(s) 229
BspPI GGATC 2 cut(s) 222, 235
BspQI GCTCTTC 1 cut(s) 264
BspT104I TTCGAA 1 cut(s) 29
BspTNI GGTCTC 1 cut(s) 159
BsrDI GCAATG 1 cut(s) 193
BsrI ACTGG 1 cut(s) 305
BssECI CCNNGG 2 cut(s) 216, 232
BssMI GATC 1 cut(s) 227
BssT1I CCWWGG 2 cut(s) 216, 232
Bst6I CTCTTC 1 cut(s) 264
BstBI TTCGAA 1 cut(s) 29
BstDSI CCRYGG 1 cut(s) 232
BstF5I GGATG 1 cut(s) 322
BstKTI GATC 1 cut(s) 230
BstMAI GTCTC 1 cut(s) 159
BstMBI GATC 1 cut(s) 227
BstNSI RCATGY 1 cut(s) 25
BstV1I GCAGC 1 cut(s) 171
BstX2I RGATCY 1 cut(s) 227
BstXI CCANNNNNNTGG 1 cut(s) 239
BstYI RGATCY 1 cut(s) 227
BsuI GTATCC 1 cut(s) 11
BtgI CCRYGG 1 cut(s) 232
BtrI CACGTC 1 cut(s) 295
BtsCI GGATG 1 cut(s) 322
BtsIMutI CAGTG 1 cut(s) 90
Csp6I GTAC 1 cut(s) 61
CviAII CATG 4 cut(s) 22, 73, 223, 233
CviJI RGCY 7 cut(s) 47, 98, 104, 202, 209, 237, 257
CviKI_1 RGCY 7 cut(s) 47, 98, 104, 202, 209, 237, 257
CviQI GTAC 1 cut(s) 61
DpnI GATC 1 cut(s) 229
DpnII GATC 1 cut(s) 227
Eam1104I CTCTTC 1 cut(s) 264
EarI CTCTTC 1 cut(s) 264
Eco130I CCWWGG 2 cut(s) 216, 232
Eco24I GRGCYC 1 cut(s) 259
Eco31I GGTCTC 1 cut(s) 159
Eco57I CTGAAG 1 cut(s) 120
EcoT14I CCWWGG 2 cut(s) 216, 232
EcoT38I GRGCYC 1 cut(s) 259
ErhI CCWWGG 2 cut(s) 216, 232
FaeI CATG 4 cut(s) 25, 76, 226, 236
FaiI YATR 7 cut(s) 7, 12, 23, 74, 224, 234, 240
FatI CATG 4 cut(s) 21, 72, 222, 232
FblI GTMKAC 1 cut(s) 108
Fnu4HI GCNGC 1 cut(s) 160
FokI GGATG 1 cut(s) 309
FriOI GRGCYC 1 cut(s) 259
Fsp4HI GCNGC 1 cut(s) 160
GluI GCNGC 1 cut(s) 160
Hin1II CATG 4 cut(s) 25, 76, 226, 236
HindIII AAGCTT 1 cut(s) 200
Hpy166II GTNNAC 1 cut(s) 109
Hpy188III TCNNGA 4 cut(s) 145, 196, 250, 326
Hpy8I GTNNAC 1 cut(s) 109
Hpy99I CGWCG 1 cut(s) 299
HpyCH4IV ACGT 1 cut(s) 294
HpyCH4V TGCA 4 cut(s) 14, 91, 186, 191
HpySE526I ACGT 1 cut(s) 294
Hsp92II CATG 4 cut(s) 25, 76, 226, 236
Kzo9I GATC 1 cut(s) 227
LguI GCTCTTC 1 cut(s) 264
LpnPI CCDG 1 cut(s) 318
Lsp1109I GCAGC 1 cut(s) 171
LweI GCATC 2 cut(s) 78, 331
MaeII ACGT 1 cut(s) 294
MalI GATC 1 cut(s) 229
MboI GATC 1 cut(s) 227
MboII GAAGA 3 cut(s) 43, 238, 251
MflI RGATCY 1 cut(s) 227
MhlI GDGCHC 1 cut(s) 259
MluCI AATT 1 cut(s) 79
MnlI CCTC 1 cut(s) 246
MslI CAYNNNNRTG 1 cut(s) 237
MspA1I CMGCKG 1 cut(s) 162
NcoI CCATGG 1 cut(s) 232
NdeII GATC 1 cut(s) 227
NlaIII CATG 4 cut(s) 25, 76, 226, 236
NlaIV GGNNCC 1 cut(s) 229
NspI RCATGY 1 cut(s) 25
NspV TTCGAA 1 cut(s) 29
PciI ACATGT 1 cut(s) 21
PciSI GCTCTTC 1 cut(s) 264
PkrI GCNGC 1 cut(s) 161
PscI ACATGT 1 cut(s) 21
PspN4I GGNNCC 1 cut(s) 229
PsuI RGATCY 1 cut(s) 227
RsaI GTAC 1 cut(s) 62
RsaNI GTAC 1 cut(s) 61
RseI CAYNNNNRTG 1 cut(s) 237
SapI GCTCTTC 1 cut(s) 264
SatI GCNGC 1 cut(s) 160
Sau3AI GATC 1 cut(s) 227
SduI GDGCHC 1 cut(s) 259
SetI ASST 6 cut(s) 100, 106, 204, 211, 218, 297
SfaNI GCATC 2 cut(s) 78, 331
SfuI TTCGAA 1 cut(s) 29
SmiMI CAYNNNNRTG 1 cut(s) 237
Sse9I AATT 1 cut(s) 79
SsiI CCGC 1 cut(s) 162
StyI CCWWGG 2 cut(s) 216, 232
TaiI ACGT 1 cut(s) 297
TaqI TCGA 5 cut(s) 29, 144, 195, 205, 297
TasI AATT 1 cut(s) 79
TscAI CASTG 1 cut(s) 90
TseI GCWGC 1 cut(s) 159
TspRI CASTG 1 cut(s) 90
XapI RAATTY 1 cut(s) 79
XceI RCATGY 1 cut(s) 25
XmiI GTMKAC 1 cut(s) 108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.