Rh7BG471700

Universal stress protein A-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0002806
Physical Location & Seq
Reverse (-)
55653486 .. 55654216
731 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG471700.1

Sequence Viewer

Length: 339 bp
ATGGAAGGGGATATTAGATACATGTTTTCGAAGAACGATGTAGTCGCCGCGATGGAGAAGTACGGGAATGACATGATAAATTCAGTGATGCAACGAGCTGAAGCTGTCTACAAAAACTTCAATGTCAACGCCAATGTAAATATCGAGAGAGTGGTTGGCAGCGGAGATCCGAAAGATGTGATTTGCAATGCAGTCGAGAAGCTTCGAGCTGATACCTTGGTCATGGGATCCCATGGCTATGGTTTCTTCAAGAGGGCACTTCTTGGAAGCGTGAGTGATTATTGTGCGAAACACGTCGAGTGTCCAGTGGTGATTGTCAAGCATCCTGACCACAAATAG

Protein Analysis

112

Amino Acids

12.47

Weight (kDa)

6.89

Isoelectric Point (pI)

21.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Usp PF00582 42 - 107 7.5e-22 Universal stress protein family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 108
AccII CGCG 1 cut(s) 50
AciI CCGC 2 cut(s) 48, 162
AclWI GGATC 3 cut(s) 161, 222, 235
AcsI RAATTY 1 cut(s) 79
AcuI CTGAAG 1 cut(s) 120
AfaI GTAC 1 cut(s) 62
AflIII ACRYGT 2 cut(s) 21, 292
AgsI TTSAA 2 cut(s) 121, 250
AjiI CACGTC 1 cut(s) 295
AluBI AGCT 4 cut(s) 98, 104, 202, 209
AluI AGCT 4 cut(s) 98, 104, 202, 209
AlwI GGATC 3 cut(s) 161, 222, 235
ApeKI GCWGC 1 cut(s) 159
ApoI RAATTY 1 cut(s) 79
AsuHPI GGTGA 1 cut(s) 322
AsuII TTCGAA 1 cut(s) 29
BaeGI GKGCMC 1 cut(s) 259
BaeI ACNNNNGTAYC 2 cut(s) 204, 237
BamHI GGATCC 1 cut(s) 227
BbvI GCAGC 1 cut(s) 171
BccI CCATC 1 cut(s) 46
BcgI CGANNNNNNTGC 2 cut(s) 175, 209
BisI GCNGC 2 cut(s) 48, 160
BlsI GCNGC 2 cut(s) 49, 161
BmgBI CACGTC 1 cut(s) 295
BmiI GGNNCC 1 cut(s) 229
BmsI GCATC 2 cut(s) 78, 331
Bpu14I TTCGAA 1 cut(s) 29
BsaJI CCNNGG 2 cut(s) 216, 232
Bse1I ACTGG 1 cut(s) 305
Bse3DI GCAATG 1 cut(s) 193
BseDI CCNNGG 2 cut(s) 216, 232
BseGI GGATG 1 cut(s) 322
BseMI GCAATG 1 cut(s) 193
BseNI ACTGG 1 cut(s) 305
BseSI GKGCMC 1 cut(s) 259
BseXI GCAGC 1 cut(s) 171
Bsh1236I CGCG 1 cut(s) 50
Bsp119I TTCGAA 1 cut(s) 29
Bsp1286I GDGCHC 1 cut(s) 259
Bsp143I GATC 2 cut(s) 166, 227
Bsp19I CCATGG 1 cut(s) 232
BspACI CCGC 2 cut(s) 48, 162
BspFNI CGCG 1 cut(s) 50
BspLI GGNNCC 1 cut(s) 229
BspPI GGATC 3 cut(s) 161, 222, 235
BspT104I TTCGAA 1 cut(s) 29
BsrDI GCAATG 1 cut(s) 193
BsrI ACTGG 1 cut(s) 305
BssECI CCNNGG 2 cut(s) 216, 232
BssMI GATC 2 cut(s) 166, 227
BssT1I CCWWGG 2 cut(s) 216, 232
BstBI TTCGAA 1 cut(s) 29
BstDSI CCRYGG 1 cut(s) 232
BstF5I GGATG 1 cut(s) 322
BstFNI CGCG 1 cut(s) 50
BstKTI GATC 2 cut(s) 169, 230
BstMBI GATC 2 cut(s) 166, 227
BstNSI RCATGY 1 cut(s) 25
BstSLI GKGCMC 1 cut(s) 259
BstUI CGCG 1 cut(s) 50
BstV1I GCAGC 1 cut(s) 171
BstX2I RGATCY 2 cut(s) 166, 227
BstXI CCANNNNNNTGG 1 cut(s) 239
BstYI RGATCY 2 cut(s) 166, 227
BtgI CCRYGG 1 cut(s) 232
BtgZI GCGATG 1 cut(s) 65
BtrI CACGTC 1 cut(s) 295
BtsCI GGATG 1 cut(s) 322
BtsIMutI CAGTG 2 cut(s) 90, 312
Csp6I GTAC 1 cut(s) 61
CviAII CATG 4 cut(s) 22, 73, 223, 233
CviJI RGCY 5 cut(s) 98, 104, 202, 209, 237
CviKI_1 RGCY 5 cut(s) 98, 104, 202, 209, 237
CviQI GTAC 1 cut(s) 61
DpnI GATC 2 cut(s) 168, 229
DpnII GATC 2 cut(s) 166, 227
Eco130I CCWWGG 2 cut(s) 216, 232
Eco57I CTGAAG 1 cut(s) 120
EcoT14I CCWWGG 2 cut(s) 216, 232
ErhI CCWWGG 2 cut(s) 216, 232
FaeI CATG 4 cut(s) 25, 76, 226, 236
FaiI YATR 5 cut(s) 23, 74, 224, 234, 240
FatI CATG 4 cut(s) 21, 72, 222, 232
FblI GTMKAC 1 cut(s) 108
Fnu4HI GCNGC 2 cut(s) 48, 160
FokI GGATG 1 cut(s) 309
Fsp4HI GCNGC 2 cut(s) 48, 160
GluI GCNGC 2 cut(s) 48, 160
Hin1II CATG 4 cut(s) 25, 76, 226, 236
HincII GTYRAC 1 cut(s) 127
HindII GTYRAC 1 cut(s) 127
HindIII AAGCTT 1 cut(s) 200
HphI GGTGA 1 cut(s) 322
Hpy166II GTNNAC 2 cut(s) 109, 127
Hpy188I TCNGA 1 cut(s) 171
Hpy188III TCNNGA 4 cut(s) 145, 196, 250, 326
Hpy8I GTNNAC 2 cut(s) 109, 127
Hpy99I CGWCG 1 cut(s) 299
HpyCH4IV ACGT 1 cut(s) 294
HpyCH4V TGCA 3 cut(s) 91, 186, 191
HpySE526I ACGT 1 cut(s) 294
Hsp92II CATG 4 cut(s) 25, 76, 226, 236
Kzo9I GATC 2 cut(s) 166, 227
LpnPI CCDG 1 cut(s) 318
Lsp1109I GCAGC 1 cut(s) 171
LweI GCATC 2 cut(s) 78, 331
MaeII ACGT 1 cut(s) 294
MalI GATC 2 cut(s) 168, 229
MboI GATC 2 cut(s) 166, 227
MboII GAAGA 2 cut(s) 43, 238
MflI RGATCY 2 cut(s) 166, 227
MhlI GDGCHC 1 cut(s) 259
MluCI AATT 1 cut(s) 79
MnlI CCTC 1 cut(s) 246
MslI CAYNNNNRTG 1 cut(s) 237
MspA1I CMGCKG 1 cut(s) 162
MvnI CGCG 1 cut(s) 50
NcoI CCATGG 1 cut(s) 232
NdeII GATC 2 cut(s) 166, 227
NlaIII CATG 4 cut(s) 25, 76, 226, 236
NlaIV GGNNCC 1 cut(s) 229
NspI RCATGY 1 cut(s) 25
NspV TTCGAA 1 cut(s) 29
PciI ACATGT 1 cut(s) 21
PkrI GCNGC 2 cut(s) 49, 161
PscI ACATGT 1 cut(s) 21
PspN4I GGNNCC 1 cut(s) 229
PsuI RGATCY 2 cut(s) 166, 227
RsaI GTAC 1 cut(s) 62
RsaNI GTAC 1 cut(s) 61
RseI CAYNNNNRTG 1 cut(s) 237
SatI GCNGC 2 cut(s) 48, 160
Sau3AI GATC 2 cut(s) 166, 227
SduI GDGCHC 1 cut(s) 259
SetI ASST 6 cut(s) 100, 106, 204, 211, 218, 297
SfaNI GCATC 2 cut(s) 78, 331
SfuI TTCGAA 1 cut(s) 29
SmiMI CAYNNNNRTG 1 cut(s) 237
Sse9I AATT 1 cut(s) 79
SsiI CCGC 2 cut(s) 48, 162
StyI CCWWGG 2 cut(s) 216, 232
TaiI ACGT 1 cut(s) 297
TaqI TCGA 5 cut(s) 29, 144, 195, 205, 297
TasI AATT 1 cut(s) 79
TauI GCSGC 1 cut(s) 50
TscAI CASTG 2 cut(s) 90, 312
TseI GCWGC 1 cut(s) 159
TspRI CASTG 2 cut(s) 90, 312
XapI RAATTY 1 cut(s) 79
XceI RCATGY 1 cut(s) 25
XmiI GTMKAC 1 cut(s) 108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.