Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002171

Physical Location & Seq

Genomic Coordinates Reverse (-)

6855363 .. 6858670

Gene Structure 3308 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0087800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGGAGCTCAAGTCGCTTTCTTTCCCCGCCGACAACCCTCCGCTTTCAGTACTCGCGGCGGCCAAGCTCGCCGGGATTTCGCTCCCCACCGACGCCTCTCTCGCTCCCGATTCTCCTCCGGTTCTTCACTTCTCCGACGGGCGAAACCTGCGCGGCGTCTCTGCGCTTCTTCGTTATTTCGGTCGTGTTTCGAATCTGTGCGGCGGCGATGCGTTTCAAGATGCTCAGATTGTTGAGTGGCTTGAGTTCGCTCCGGTGCTTTCAGTCGGCTCTGCTTTCGAGGATGCCTGCAAGCATTTAGATGAGTATTTGGGAAGCAGAACCTTCTTGGTTGATCATTCGTTTTCGATCGCCGATATCGCAATCTGGTCAGGCCTTGCAGGAGCTGGGCTTAGATGGGAGAGTTTGAGGAAGTCAAAGAAATATCAAAATCTTACTAGGTGGTATGGTTCGATATTGGCGGAACATGGTGATGCATTGAATCAAGTGACAGGTGCATATGTTGGCAAGAAAGGCTCAGCGAAATCGAAAGAGAACCCGGCCAGTCAGCAGTCGAAGGGCGTAAATGGAGATGTAGTGAAAGCAGGAACCAACAGGGGAACATTCGAGGTGGATCTTCCGGAGGCTGAGGTTGGAAAGGTGAAGTTGAGGTTTGCGCCGGAGCCGAGTGGTTATCTTCACATTGGGCACTCGAAAGCTGCGTTGTTGAATCAGTATTTTGCTCAGCGGTATCAAGGTCAGGTTATTGTGCGGTTTGATGATACAAATCCTGCTAAAGAAAGCAACGAGTTTGTGGATAATCTTCTCAAGGATATTGAGACTTTGGGCATCAAGTATGAGACGGTTACCCATACTTCAAATTACTTCCCTGAGTTGATGGAAATGGCCAAGAAGCTGATTAAAGAAGGTAAAGCATATGTCGATGATACACCTAGAGAGGAGATGCAAAAACAACGAATGGATGGGATTGAGTCAAAGTGTAGAAACCACAGCATAGAGGAAAATGAGAAATTGTGGGAGGAGATGATTGCAGGTTCAGAGAGGGGTCTGCAGTGTTGTGTCAGAGGGAAGCTGGATATGCAGGACCCTAATAAATCACTCAGAGATCCAGTTTATTATCGTTGCAATCCAATGCCACATCATAGGAAAGAGATAGGGTCCAAGTACAAGGTCTACCCAACTTATGATTTTGCTTGTCCATTTGTTGATTCCATTGAAGGTATAACTCATGCACTTCGATCCAGTGAGTATCATGATCGCAACGCCCAGTACTATCGGATTCAAGATGATATGGGACTGAGAAGAGTGCATCTGTATGAGTTCAGTAGGTTGAACATGGTCTATACACTCCTCAGCAAGCGCAAGCTTTTGTGGTTTGTTCAAAATGAGAAGGTCAACGGATGGGATGATCCTCGATTTCCAACTGTTCAAGGAATTGTGCGTAGAGGTCTCAAAGTTGAAGCATTGATACAGTTCATTCTTGAGCAGGGGGCTTCAAAGAATCTGAATCTTATGGAATGGGACAAACTGTGGACAATTAACAAGAAGATTATTGATCCTGTATGCCCAAGACATACTGCCGTCATTGAAGAGGGACGAGTGTTGTTGACCCTCTCTAATGGCCCTGAAAAGCCATTTGTCCGCATAATACCTAGGCATAAGAAGTATGAAGGTGCTGGAGAGAAGGCAACAACATTCACAAGAAGCATATGGATAGATCGAGCTGATGCAGAGTTGATATCAGTAGACGAGGAAGTGACATTGATGGATTGGGGGAATGCCATTGTTAAGAAGATTGAGAAAGACCAAGACGGAAATCTTGCGCTCACAGGGGTTTTGCATCTTGAAGGATCTGTGAAAACCACCAAATTGAAGCTTACCTGGCTGCCTGAAATAGATGAACTGGTTAAGCTCTCATTGATGGAGTTTGATTATCTGATAACAAAGAAGAAGCTTGAGGAGGGCGAGGATTTCCTTGATGTGCTTAACCCATGTACCGAAAAGGAGACAGCAGCCCTTGGGGATTCCAACATGCGAAATCTGAAGCGTGGAGATGTATTGCAACTTGAGAGGAAAGGGTACTTCAGATGTGATGTACCTTACCTCAGGCCTTCAAAGCCTATTGTTCTCTTTGCAATCCCCGACGGCAGGCAGCAGGCTGGGTTAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010045 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071241 GO:0071248 GO:0071289 GO:0080090 GO:0140110 GO:1901698 GO:1901700 GO:1903506 GO:2000026 GO:2000112 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2H2_6

Protein Analysis

723

Amino Acids

81.81

Weight (kDa)

6.79

Isoelectric Point (pI)

33.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1c	PF00749	213 - 519	4.3e-103	tRNA synthetases class I (E and Q), catalytic domain
tRNA-synt_1c_C	PF03950	522 - 607	4.4e-16	tRNA synthetases class I (E and Q), anti-codon binding domain
tRNA-synt_1c_C2	PF20974	625 - 698	6.9e-14	tRNA synthetases class I (E and Q), anti-codon binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002171)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37430 AT3G53600
fragaria_vesca	FvH4_6g14410 FvH4_6g14411
malus_domestica	MD04G1119600.v1.1 MD12G1136900.v1.1
prunus_persica	Prupe.6G249300_v2.0.a1
pyrus_communis	pycom04g10910 pycom12g13140
rosa_chinensis	RchiOBHm_Chr3g0467501 RchiOBHm_Chr3g0467521 RchiOBHm_Chr3g0467531 RchiOBHm_Chr3g0467541
rosa_laevigata	RLG00000024493 RLG00000024494 RLG00000024497 RLG00000024498 RLG00000024500 RLG00000024501
rosa_multiflora	Rmu_co8150280.1_g000001 Rmu_sc0000286.1_g000002 Rmu_sc0000286.1_g000003 Rmu_sc0000286.1_g000005 Rmu_sc0006408.1_g000010
rosa_roxburghii	Rroxscaffold_6G00413620 Rroxscaffold_6G00413630 Rroxscaffold_6G00413640
rosa_rugosa	Rorug03G0087700 Rorug03G0087800 Rorug03G0087900 Rorug03G0087900
rosa_samantha	Rh3AG135700 Rh3AG135800 Rh3BG157300 Rh3BG157400 Rh3BG157500 Rh3BG157600 Rh3CG157400 Rh3CG157500 Rh3DG158300 Rh3DG158400
rosa_wichuraiana	Rw3G012890 Rw3G012900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	156, 1022
AccI	GTMKAC	2 cut(s)	1173, 1746
AccII	CGCG	2 cut(s)	56, 153
AccIII	TCCGGA	1 cut(s)	619
AclWI	GGATC	6 cut(s)	621, 1100, 1233, 1403, 1550, 1858
AcoI	YGGCCR	3 cut(s)	60, 540, 885
AcuI	CTGAAG	2 cut(s)	2063, 2068
AcyI	GRCGYC	2 cut(s)	93, 156
AfaI	GTAC	6 cut(s)	51, 1166, 1271, 1996, 2081, 2097
AfiI	CCNNNNNNNGG	1 cut(s)	2148
AjnI	CCWGG	1 cut(s)	1880
Alw21I	GWGCWC	1 cut(s)	9
Alw26I	GTCTC	5 cut(s)	163, 812, 833, 1454, 2000
AlwI	GGATC	6 cut(s)	621, 1100, 1233, 1403, 1550, 1858
AlwNI	CAGNNNCTG	1 cut(s)	386
Aor13HI	TCCGGA	1 cut(s)	619
AoxI	GGCC	6 cut(s)	60, 373, 540, 885, 1621, 2108
ApeKI	GCWGC	4 cut(s)	698, 1885, 2012, 2152
AspA2I	CCTAGG	1 cut(s)	1652
AspLEI	GCGC	5 cut(s)	153, 166, 658, 1362, 1825
AspS9I	GGNCC	3 cut(s)	1084, 1158, 1622
AsuC2I	CCSGG	2 cut(s)	73, 539
AsuHPI	GGTGA	2 cut(s)	482, 652
AsuII	TTCGAA	1 cut(s)	191
AvaII	GGWCC	2 cut(s)	1084, 1158
AvrII	CCTAGG	1 cut(s)	1652
AxyI	CCTNAGG	1 cut(s)	2105
BaeGI	GKGCMC	1 cut(s)	690
BaeI	ACNNNNGTAYC	2 cut(s)	1978, 2011
BalI	TGGCCA	1 cut(s)	887
BanII	GRGCYC	1 cut(s)	9
BarI	GAAGNNNNNNTAC	2 cut(s)	1452, 1484
Bbv12I	GWGCWC	1 cut(s)	9
BbvCI	CCTCAGC	2 cut(s)	627, 1352
BbvI	GCAGC	4 cut(s)	685, 1872, 2024, 2164
BccI	CCATC	6 cut(s)	390, 871, 956, 1395, 1759, 1915
BceAI	ACGGC	2 cut(s)	1565, 2161
BciT130I	CCWGG	1 cut(s)	1882
BclI	TGATCA	1 cut(s)	334
BcnI	CCSGG	2 cut(s)	73, 539
BcoDI	GTCTC	5 cut(s)	163, 812, 833, 1454, 2000
BfaI	CTAG	3 cut(s)	438, 933, 1653
BfmI	CTRYAG	1 cut(s)	1049
BfuAI	ACCTGC	2 cut(s)	156, 1022
BisI	GCNGC	9 cut(s)	57, 60, 154, 202, 205, 699, 1886, 2013, 2153
BlnI	CCTAGG	1 cut(s)	1652
BlpI	GCTNAGC	2 cut(s)	517, 723
BlsI	GCNGC	9 cut(s)	58, 61, 155, 203, 206, 700, 1887, 2014, 2154
BmcAI	AGTACT	2 cut(s)	51, 1271
Bme1390I	CCNGG	3 cut(s)	73, 539, 1882
Bme18I	GGWCC	2 cut(s)	1084, 1158
BmgT120I	GGNCC	3 cut(s)	1084, 1158, 1622
BmiI	GGNNCC	4 cut(s)	589, 663, 1086, 1159
BmrFI	CCNGG	3 cut(s)	73, 539, 1882
BmrI	ACTGGG	1 cut(s)	1261
BmsI	GCATC	9 cut(s)	199, 211, 274, 463, 837, 933, 1318, 1717, 1849
BmuI	ACTGGG	1 cut(s)	1261
BpmI	CTGGAG	1 cut(s)	1698
Bpu10I	CCTNAGC	2 cut(s)	627, 1352
Bpu1102I	GCTNAGC	2 cut(s)	517, 723
Bpu14I	TTCGAA	1 cut(s)	191
BpuEI	CTTGAG	5 cut(s)	263, 791, 1502, 1976, 2087
BpuMI	CCSGG	2 cut(s)	73, 539
BsaBI	GATNNNNATC	1 cut(s)	765
BsaHI	GRCGYC	2 cut(s)	93, 156
BsaI	GGTCTC	1 cut(s)	1454
BsaJI	CCNNGG	2 cut(s)	1652, 2017
BsaWI	WCCGGW	3 cut(s)	118, 253, 619
BsaXI	ACNNNNNCTCC	3 cut(s)	26, 561, 591
Bsc4I	CCNNNNNNNGG	1 cut(s)	2148
Bse1I	ACTGG	5 cut(s)	543, 1109, 1242, 1267, 1908
Bse21I	CCTNAGG	1 cut(s)	2105
Bse8I	GATNNNNATC	1 cut(s)	765
BseAI	TCCGGA	1 cut(s)	619
BseBI	CCWGG	1 cut(s)	1882
BseDI	CCNNGG	2 cut(s)	1652, 2017
BseGI	GGATG	4 cut(s)	289, 967, 1406, 1411
BseJI	GATNNNNATC	1 cut(s)	765
BseLI	CCNNNNNNNGG	1 cut(s)	2148
BseMII	CTCAG	9 cut(s)	239, 531, 618, 737, 861, 1114, 1289, 1366, 2119
BseNI	ACTGG	5 cut(s)	543, 1109, 1242, 1267, 1908
BseRI	GAGGAG	5 cut(s)	105, 953, 1034, 1340, 1973
BseSI	GKGCMC	1 cut(s)	690
BseXI	GCAGC	4 cut(s)	685, 1872, 2024, 2164
BseYI	CCCAGC	2 cut(s)	386, 2159
Bsh1236I	CGCG	2 cut(s)	56, 153
Bsh1285I	CGRYCG	2 cut(s)	184, 351
BshFI	GGCC	6 cut(s)	62, 375, 542, 887, 1623, 2110
BsiEI	CGRYCG	2 cut(s)	184, 351
BsiHKAI	GWGCWC	1 cut(s)	9
BsiSI	CCGG	6 cut(s)	72, 119, 254, 539, 620, 659
BslFI	GGGAC	3 cut(s)	1308, 1535, 1608
BslI	CCNNNNNNNGG	1 cut(s)	2148
BsmAI	GTCTC	5 cut(s)	163, 812, 833, 1454, 2000
BsmBI	CGTCTC	2 cut(s)	163, 833
BsmFI	GGGAC	3 cut(s)	1308, 1535, 1608
BsmI	GAATGC	1 cut(s)	1783
BsnI	GGCC	6 cut(s)	62, 375, 542, 887, 1623, 2110
Bso31I	GGTCTC	1 cut(s)	1454
Bsp119I	TTCGAA	1 cut(s)	191
Bsp1286I	GDGCHC	2 cut(s)	9, 690
Bsp13I	TCCGGA	1 cut(s)	619
Bsp1720I	GCTNAGC	2 cut(s)	517, 723
BspANI	GGCC	6 cut(s)	62, 375, 542, 887, 1623, 2110
BspCNI	CTCAG	9 cut(s)	238, 530, 619, 736, 862, 1113, 1290, 1365, 2118
BspEI	TCCGGA	1 cut(s)	619
BspFNI	CGCG	2 cut(s)	56, 153
BspHI	TCATGA	1 cut(s)	1252
BspLI	GGNNCC	4 cut(s)	589, 663, 1086, 1159
BspMAI	CTGCAG	1 cut(s)	1053
BspMI	ACCTGC	2 cut(s)	156, 1022
BspPI	GGATC	6 cut(s)	621, 1100, 1233, 1403, 1550, 1858
BspT104I	TTCGAA	1 cut(s)	191
BspTNI	GGTCTC	1 cut(s)	1454
BsrI	ACTGG	5 cut(s)	543, 1109, 1242, 1267, 1908
BssECI	CCNNGG	2 cut(s)	1652, 2017
BssNI	GRCGYC	2 cut(s)	93, 156
BssT1I	CCWWGG	2 cut(s)	1652, 2017
Bst2UI	CCWGG	1 cut(s)	1882
Bst4CI	ACNGT	4 cut(s)	844, 1426, 1473, 1530
Bst6I	CTCTTC	2 cut(s)	1297, 1584
BstACI	GRCGYC	2 cut(s)	93, 156
BstBI	TTCGAA	1 cut(s)	191
BstC8I	GCNNGC	7 cut(s)	69, 289, 293, 1358, 1364, 2150, 2157
BstEII	GGTNACC	1 cut(s)	844
BstF5I	GGATG	4 cut(s)	289, 967, 1406, 1411
BstFNI	CGCG	2 cut(s)	56, 153
BstHHI	GCGC	5 cut(s)	153, 166, 658, 1362, 1825
BstMAI	GTCTC	5 cut(s)	163, 812, 833, 1454, 2000
BstMCI	CGRYCG	2 cut(s)	184, 351
BstMWI	GCNNNNNNNGC	9 cut(s)	13, 68, 101, 148, 359, 513, 1078, 1882, 2116
BstNI	CCWGG	1 cut(s)	1882
BstNSI	RCATGY	1 cut(s)	2035
BstPI	GGTNACC	1 cut(s)	844
BstSCI	CCNGG	3 cut(s)	71, 537, 1880
BstSFI	CTRYAG	1 cut(s)	1049
BstSLI	GKGCMC	1 cut(s)	690
BstUI	CGCG	2 cut(s)	56, 153
BstV1I	GCAGC	4 cut(s)	685, 1872, 2024, 2164
BstX2I	RGATCY	3 cut(s)	613, 1105, 1850
BstYI	RGATCY	3 cut(s)	613, 1105, 1850
Bsu36I	CCTNAGG	1 cut(s)	2105
BsuRI	GGCC	6 cut(s)	62, 375, 542, 887, 1623, 2110
BtgZI	GCGATG	1 cut(s)	222
BtsCI	GGATG	4 cut(s)	289, 967, 1406, 1411
BtsI	GCAGTG	1 cut(s)	1058
BtsIMutI	CAGTG	2 cut(s)	1058, 1249
BveI	ACCTGC	2 cut(s)	156, 1022
Cac8I	GCNNGC	7 cut(s)	69, 289, 293, 1358, 1364, 2150, 2157
CaiI	CAGNNNCTG	1 cut(s)	386
CciI	TCATGA	1 cut(s)	1252
CfoI	GCGC	5 cut(s)	153, 166, 658, 1362, 1825
Cfr13I	GGNCC	3 cut(s)	1084, 1158, 1622
CseI	GACGC	2 cut(s)	101, 145
Csp6I	GTAC	6 cut(s)	50, 1165, 1270, 1995, 2080, 2096
CviAII	CATG	6 cut(s)	467, 1229, 1253, 1336, 1992, 2032
CviQI	GTAC	6 cut(s)	50, 1165, 1270, 1995, 2080, 2096
EaeI	YGGCCR	3 cut(s)	60, 540, 885
Eam1104I	CTCTTC	2 cut(s)	1297, 1584
EarI	CTCTTC	2 cut(s)	1297, 1584
EciI	GGCGGA	1 cut(s)	476
Ecl136II	GAGCTC	1 cut(s)	7
Eco130I	CCWWGG	2 cut(s)	1652, 2017
Eco147I	AGGCCT	2 cut(s)	375, 2110
Eco24I	GRGCYC	1 cut(s)	9
Eco31I	GGTCTC	1 cut(s)	1454
Eco32I	GATATC	2 cut(s)	358, 1740
Eco47I	GGWCC	2 cut(s)	1084, 1158
Eco53kI	GAGCTC	1 cut(s)	7
Eco57I	CTGAAG	2 cut(s)	2063, 2068
Eco81I	CCTNAGG	1 cut(s)	2105
Eco91I	GGTNACC	1 cut(s)	844
EcoICRI	GAGCTC	1 cut(s)	7
EcoO109I	RGGNCCY	1 cut(s)	1084
EcoO65I	GGTNACC	1 cut(s)	844
EcoRII	CCWGG	1 cut(s)	1880
EcoRV	GATATC	2 cut(s)	358, 1740
EcoT14I	CCWWGG	2 cut(s)	1652, 2017
EcoT22I	ATGCAT	1 cut(s)	478
EcoT38I	GRGCYC	1 cut(s)	9
ErhI	CCWWGG	2 cut(s)	1652, 2017
Esp3I	CGTCTC	2 cut(s)	163, 833
FaeI	CATG	6 cut(s)	470, 1232, 1256, 1339, 1995, 2035
FaqI	GGGAC	3 cut(s)	1308, 1535, 1608
FatI	CATG	6 cut(s)	466, 1228, 1252, 1335, 1991, 2031
FauI	CCCGC	1 cut(s)	34
FauNDI	CATATG	3 cut(s)	499, 916, 1709
FbaI	TGATCA	1 cut(s)	334
FblI	GTMKAC	2 cut(s)	1173, 1746
Fnu4HI	GCNGC	9 cut(s)	57, 60, 154, 202, 205, 699, 1886, 2013, 2153
FokI	GGATG	4 cut(s)	296, 974, 1413, 1418
FriOI	GRGCYC	1 cut(s)	9
Fsp4HI	GCNGC	9 cut(s)	57, 60, 154, 202, 205, 699, 1886, 2013, 2153
FspBI	CTAG	3 cut(s)	438, 933, 1653
GlaI	GCGC	5 cut(s)	152, 165, 657, 1361, 1824
GluI	GCNGC	9 cut(s)	57, 60, 154, 202, 205, 699, 1886, 2013, 2153
GsaI	CCCAGC	2 cut(s)	390, 2163
GsuI	CTGGAG	1 cut(s)	1698
HaeIII	GGCC	6 cut(s)	62, 375, 542, 887, 1623, 2110
HapII	CCGG	6 cut(s)	72, 119, 254, 539, 620, 659
HgaI	GACGC	2 cut(s)	101, 145
HhaI	GCGC	5 cut(s)	153, 166, 658, 1362, 1825
Hin1I	GRCGYC	2 cut(s)	93, 156
Hin1II	CATG	6 cut(s)	470, 1232, 1256, 1339, 1995, 2035
Hin6I	GCGC	5 cut(s)	151, 164, 656, 1360, 1823
HinP1I	GCGC	5 cut(s)	151, 164, 656, 1360, 1823
HincII	GTYRAC	2 cut(s)	1396, 1608
HindII	GTYRAC	2 cut(s)	1396, 1608
HindIII	AAGCTT	3 cut(s)	1364, 1874, 1952
HpaII	CCGG	6 cut(s)	72, 119, 254, 539, 620, 659
HphI	GGTGA	2 cut(s)	482, 652
Hpy166II	GTNNAC	5 cut(s)	1174, 1396, 1533, 1608, 1747
Hpy188III	TCNNGA	7 cut(s)	107, 218, 620, 1253, 1283, 1481, 1844
Hpy8I	GTNNAC	5 cut(s)	1174, 1396, 1533, 1608, 1747
Hpy99I	CGWCG	3 cut(s)	95, 140, 2147
HpyAV	CCTTC	9 cut(s)	334, 550, 899, 1211, 1384, 1664, 1678, 1841, 2121
HpyCH4III	ACNGT	4 cut(s)	844, 1426, 1473, 1530
HpyF10VI	GCNNNNNNNGC	9 cut(s)	13, 68, 101, 148, 359, 513, 1078, 1882, 2116
Hsp92I	GRCGYC	2 cut(s)	93, 156
Hsp92II	CATG	6 cut(s)	470, 1232, 1256, 1339, 1995, 2035
HspAI	GCGC	5 cut(s)	151, 164, 656, 1360, 1823
Kpn2I	TCCGGA	1 cut(s)	619
Ksp22I	TGATCA	1 cut(s)	334
LmnI	GCTCC	6 cut(s)	4, 87, 109, 256, 383, 661
Lsp1109I	GCAGC	4 cut(s)	685, 1872, 2024, 2164
LweI	GCATC	9 cut(s)	199, 211, 274, 463, 837, 933, 1318, 1717, 1849
MaeI	CTAG	3 cut(s)	438, 933, 1653
MaeIII	GTNAC	3 cut(s)	487, 844, 1756
MflI	RGATCY	3 cut(s)	613, 1105, 1850
MhlI	GDGCHC	2 cut(s)	9, 690
MlsI	TGGCCA	1 cut(s)	887
MluCI	AATT	5 cut(s)	859, 1010, 1434, 1536, 1868
MluNI	TGGCCA	1 cut(s)	887
MlyI	GAGTC	1 cut(s)	980
MmeI	TCCRAC	4 cut(s)	159, 613, 1445, 2052
Mox20I	TGGCCA	1 cut(s)	887
Mph1103I	ATGCAT	1 cut(s)	478
MroI	TCCGGA	1 cut(s)	619
MscI	TGGCCA	1 cut(s)	887
MseI	TTAA	6 cut(s)	900, 1539, 1788, 1908, 1986, 2165
MslI	CAYNNNNRTG	3 cut(s)	300, 471, 1314
Msp20I	TGGCCA	1 cut(s)	887
MspA1I	CMGCKG	1 cut(s)	727
MspI	CCGG	6 cut(s)	72, 119, 254, 539, 620, 659
MspR9I	CCNGG	3 cut(s)	73, 539, 1882
Mva1269I	GAATGC	1 cut(s)	1783
MvaI	CCWGG	1 cut(s)	1882
MvnI	CGCG	2 cut(s)	56, 153
MwoI	GCNNNNNNNGC	9 cut(s)	13, 68, 101, 148, 359, 513, 1078, 1882, 2116
NciI	CCSGG	2 cut(s)	73, 539
NdeI	CATATG	3 cut(s)	499, 916, 1709
NlaIII	CATG	6 cut(s)	470, 1232, 1256, 1339, 1995, 2035
NlaIV	GGNNCC	4 cut(s)	589, 663, 1086, 1159
NmeAIII	GCCGAG	1 cut(s)	690
NmuCI	GTSAC	2 cut(s)	487, 1756
NsiI	ATGCAT	1 cut(s)	478
NspI	RCATGY	1 cut(s)	2035
NspV	TTCGAA	1 cut(s)	191
PagI	TCATGA	1 cut(s)	1252
PceI	AGGCCT	2 cut(s)	375, 2110
PcsI	WCGNNNNNNNCGW	1 cut(s)	698
PctI	GAATGC	1 cut(s)	1783
PfeI	GAWTC	9 cut(s)	110, 193, 481, 709, 1208, 1279, 1501, 1507, 2024
PkrI	GCNGC	9 cut(s)	58, 61, 155, 203, 206, 700, 1887, 2014, 2154
Ple19I	CGATCG	1 cut(s)	351
PleI	GAGTC	1 cut(s)	979
PpsI	GAGTC	1 cut(s)	979
PpuMI	RGGWCCY	1 cut(s)	1084
Psp124BI	GAGCTC	1 cut(s)	9
Psp5II	RGGWCCY	1 cut(s)	1084
Psp6I	CCWGG	1 cut(s)	1880
PspEI	GGTNACC	1 cut(s)	844
PspFI	CCCAGC	2 cut(s)	386, 2159
PspGI	CCWGG	1 cut(s)	1880
PspN4I	GGNNCC	4 cut(s)	589, 663, 1086, 1159
PspPI	GGNCC	3 cut(s)	1084, 1158, 1622
PspPPI	RGGWCCY	1 cut(s)	1084
PstI	CTGCAG	1 cut(s)	1053
PstNI	CAGNNNCTG	1 cut(s)	386
PsuI	RGATCY	3 cut(s)	613, 1105, 1850
PvuI	CGATCG	1 cut(s)	351
RsaI	GTAC	6 cut(s)	51, 1166, 1271, 1996, 2081, 2097
RsaNI	GTAC	6 cut(s)	50, 1165, 1270, 1995, 2080, 2096
RseI	CAYNNNNRTG	3 cut(s)	300, 471, 1314
SacI	GAGCTC	1 cut(s)	9
SaqAI	TTAA	6 cut(s)	900, 1539, 1788, 1908, 1986, 2165
SatI	GCNGC	9 cut(s)	57, 60, 154, 202, 205, 699, 1886, 2013, 2153
Sau96I	GGNCC	3 cut(s)	1084, 1158, 1622
ScaI	AGTACT	2 cut(s)	51, 1271
SchI	GAGTC	1 cut(s)	980
ScrFI	CCNGG	3 cut(s)	73, 539, 1882
SduI	GDGCHC	2 cut(s)	9, 690
SfaNI	GCATC	9 cut(s)	199, 211, 274, 463, 837, 933, 1318, 1717, 1849
SfcI	CTRYAG	1 cut(s)	1049
SfuI	TTCGAA	1 cut(s)	191
SinI	GGWCC	2 cut(s)	1084, 1158
SmiMI	CAYNNNNRTG	3 cut(s)	300, 471, 1314
SmlI	CTYRAG	6 cut(s)	8, 242, 806, 1481, 1955, 2066
SmoI	CTYRAG	6 cut(s)	8, 242, 806, 1481, 1955, 2066
Sse9I	AATT	5 cut(s)	859, 1010, 1434, 1536, 1868
SseBI	AGGCCT	2 cut(s)	375, 2110
SspMI	CTAG	3 cut(s)	438, 933, 1653
SstI	GAGCTC	1 cut(s)	9
StuI	AGGCCT	2 cut(s)	375, 2110
StyD4I	CCNGG	3 cut(s)	71, 537, 1880
StyI	CCWWGG	2 cut(s)	1652, 2017
TaaI	ACNGT	4 cut(s)	844, 1426, 1473, 1530
TaqII	GACCGA	1 cut(s)	170
TasI	AATT	5 cut(s)	859, 1010, 1434, 1536, 1868
TatI	WGTACW	3 cut(s)	49, 1164, 1269
TauI	GCSGC	5 cut(s)	59, 62, 156, 204, 207
TfiI	GAWTC	9 cut(s)	110, 193, 481, 709, 1208, 1279, 1501, 1507, 2024
Tru1I	TTAA	6 cut(s)	900, 1539, 1788, 1908, 1986, 2165
Tru9I	TTAA	6 cut(s)	900, 1539, 1788, 1908, 1986, 2165
TscAI	CASTG	2 cut(s)	1058, 1249
TseFI	GTSAC	2 cut(s)	487, 1756
TseI	GCWGC	4 cut(s)	698, 1885, 2012, 2152
Tsp45I	GTSAC	2 cut(s)	487, 1756
TspDTI	ATGAA	3 cut(s)	1465, 1683, 1914
TspGWI	ACGGA	2 cut(s)	1413, 1827
TspRI	CASTG	2 cut(s)	1058, 1249
VpaK11BI	GGWCC	2 cut(s)	1084, 1158
XceI	RCATGY	1 cut(s)	2035
XmaJI	CCTAGG	1 cut(s)	1652
XmiI	GTMKAC	2 cut(s)	1173, 1746
XspI	CTAG	3 cut(s)	438, 933, 1653
ZrmI	AGTACT	2 cut(s)	51, 1271
Zsp2I	ATGCAT	1 cut(s)	478

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.