Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002533

Physical Location & Seq

Genomic Coordinates Forward (+)

12862732 .. 12867242

Gene Structure 4511 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0156000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1575 bp

ATGGCGGAGGTGAGAGGATCGAACTCATTCCGTGACGAGATGGCCAGTCTATTGGGGGATGCAGGGATCCGATACGCCGCGGCCGATCCTATCGGAATCTCGACGGCGTCGTTTGCAGCACCGACGGCGGGTCACGTCTCCGGCTACTCGCCGGAGCAATCGGAGAGTTTGAAGGATCAGGTTAAGGGATTTGCAATGGCTTGGGGGGAGATTCTGCTGGATTTGGGGAGAGGATGTAAGGACATTGTGCAGCAGAGCTTTTTGACTGAGGACTCGTACATTGTGAGGAAGCTTGAGACGCCCTGCGCCAAAGCGTCGGCGAAGTTGAGGTACTTGAATGAGTTCTTGCCGGAGGATCGCGATCCGGCTCACGCTTGGCTGGTGATTCTCTTTGTTTTCATTCTTGCACTTACAGCTATAAGTATAAATACCGAACATGACAGCTTGGTTCGACAAGTGAAGAGAGTGCAGATGCATCGTCCCAGTGCTACTCATGTACTACTTCCAGATGGAAGGCGATTGGCTTATCACGAGCAAGGTGTCCCAGCTAAAACAACTCGGATTTCACTGATTGCTCCTCATTCTTTTCTTTCATCACGACTTGCAGGTATGCCGGGAATTAAAATATCATTGCTTGAAGAGTTTGGTATCCGCTTGATCACATATGATCTTCCTGGCTTTGGGGAGAGTGATCCTCATCCCAGCAGGAATCTTAACTCATCTGCGATAGATATCCTGTGTTTAGCCAATGCCATTGGTATTGAAGACAAGTTCTGGGTGCTGGGCCACTCAAGTGGAGCCATGCATGCTTGGGCTGCTCTTAGATACATTCCTGACAAAGTTGCAGGTGCAGCTATGGTGGCCCCAATAATTAATCCCTATGAACCTGGCATGACTAAGGAAGAGATGAAAAGAACTTGGGAACCATGGGTTTTTAGAAGGAAAACAATGTACTTCTTTGCTCGTAGGTTTCCAAAGTTTCTAAACTCTTATTATCGCCGAAGCTTCCTATCAGGAAAGCATGACAGAATTGACAAGTGGTTATCTCTCTCACTGGGCAAGAGGGATGAAATTCTAATCGAAGAGCCAAAAATTGAAGAGCATTTGCAAAGGGATGTGGAGGAGTCGATCCGCCAGGATAGTACTAAACCCTTTATAGAGGAAGCTGTGCTACAAGTATCTAAGTGGGGTTTTAGTGTGGCAGATCTTCAGGTGCAGAAAAAGTGTCAACAGAGAGGAATTTTAACTTGGCTCAGGTCCTTCTACAGTGAGGCAGAATGTGAACTGACTGGATTTCTAGGCCAGATACACATATGGCAGGGGATGGATGATCAGATAATCCCACCATCAGTGACTGACTATATTTCGCGGGTTTTACCCGGAGCTTATGTGCATAAGCTCCCAAATGAAGGCCACTTCTCCTACTTGTATTTCTGTGATGAATGCCATAGACAGATGTTTACTACTCTTTTCGGAAGCCCTCAAGGTCCAGTTAAGGAAGTTGTTACTCCAACTCAAGTGGAAGGCAATTCTGAAGAGCTATCATCATCAAATGCTGATTCTCCCACGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L22

Protein Analysis

524

Amino Acids

58.97

Weight (kDa)

6.09

Isoelectric Point (pI)

56.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Abhydrolase_1	PF00561	210 - 476	6.4e-21	alpha/beta hydrolase fold
Hydrolase_4	PF12146	212 - 300	1.1e-07	Serine aminopeptidase, S33
Abhydrolase_6	PF12697	215 - 476	1e-11	Alpha/beta hydrolase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002533)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52370 AT1G52370 AT1G52370 AT1G52370 AT4G28360
fragaria_vesca	FvH4_6g20730 FvH4_6g20730
malus_domestica	MD12G1043300.v1.1 MD12G1043400.v1.1 MD14G1042400.v1.1
prunus_persica	Prupe.7G091500_v2.0.a1 Prupe.7G091500_v2.0.a1 Prupe.7G091500_v2.0.a1 Prupe.7G091500_v2.0.a1
pyrus_communis	pycom12g03740 pycom14g03610
rosa_chinensis	RchiOBHm_Chr3g0476631 RchiOBHm_Chr7g0223381
rosa_laevigata	RLG00000001980
rosa_multiflora	Rmu_sc0008241.1_g000012 Rmu_sc0009107.1_g000009 Rmu_sc0022781.1_g000001
rosa_roxburghii	Rroxscaffold_3G00235860 Rroxscaffold_6G00405140
rosa_rugosa	Rorug03G0156000 Rorug03G0156000 Rorug03G0156000 Rorug03G0156100 Rorug03G0156200 Rorug07G0216400 Rorug07G0216400
rosa_samantha	Rh3AG206400 Rh3BG238800 Rh3CG232700 Rh3DG232700 Rh7AG360100 Rh7BG350100 Rh7CG378500 Rh7DG355300
rosa_wichuraiana	Rw3G018800 Rw7G030600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	836
Acc36I	ACCTGC	2 cut(s)	596, 836
AccII	CGCG	3 cut(s)	80, 360, 1369
AciI	CCGC	7 cut(s)	5, 78, 80, 128, 652, 1132, 1369
AclWI	GGATC	9 cut(s)	25, 61, 74, 80, 183, 356, 363, 686, 1123
AcoI	YGGCCR	2 cut(s)	42, 81
AcsI	RAATTY	2 cut(s)	1071, 1239
AcuI	CTGAAG	2 cut(s)	1193, 1554
AcyI	GRCGYC	2 cut(s)	107, 299
AdeI	CACNNNGTG	1 cut(s)	1572
AfaI	GTAC	5 cut(s)	278, 332, 498, 953, 1144
AfiI	CCNNNNNNNGG	3 cut(s)	128, 680, 1409
AgsI	TTSAA	5 cut(s)	172, 337, 638, 764, 1097
AhdI	GACNNNNNGTC	1 cut(s)	129
AjiI	CACGTC	1 cut(s)	136
AjnI	CCWGG	3 cut(s)	673, 886, 1134
AjuI	GAANNNNNNNTTGG	2 cut(s)	1231, 1263
AleI	CACNNNNGTG	1 cut(s)	792
Alw26I	GTCTC	2 cut(s)	142, 290
AlwI	GGATC	9 cut(s)	25, 61, 74, 80, 183, 356, 363, 686, 1123
AlwNI	CAGNNNCTG	1 cut(s)	1355
AoxI	GGCC	6 cut(s)	42, 81, 784, 861, 1300, 1411
ApeKI	GCWGC	4 cut(s)	116, 250, 815, 851
ApoI	RAATTY	2 cut(s)	1071, 1239
AseI	ATTAAT	1 cut(s)	873
Asp700I	GAANNNNTTC	2 cut(s)	26, 341
AspLEI	GCGC	1 cut(s)	308
AspS9I	GGNCC	4 cut(s)	784, 862, 1257, 1487
AsuC2I	CCSGG	2 cut(s)	615, 1380
AsuHPI	GGTGA	2 cut(s)	22, 394
AvaII	GGWCC	2 cut(s)	1257, 1487
BalI	TGGCCA	1 cut(s)	44
BamHI	GGATCC	1 cut(s)	66
BarI	GAAGNNNNNNTAC	4 cut(s)	314, 346, 1155, 1187
BauI	CACGAG	1 cut(s)	530
BbsI	GAAGAC	1 cut(s)	771
BbvI	GCAGC	4 cut(s)	128, 262, 802, 863
BccI	CCATC	4 cut(s)	34, 503, 1318, 1354
BceAI	ACGGC	2 cut(s)	120, 141
BcgI	CGANNNNNNTGC	2 cut(s)	458, 492
BciT130I	CCWGG	3 cut(s)	675, 888, 1136
BciVI	GTATCC	1 cut(s)	659
BclI	TGATCA	2 cut(s)	657, 1330
BcnI	CCSGG	2 cut(s)	615, 1380
BcoDI	GTCTC	2 cut(s)	142, 290
BfaI	CTAG	1 cut(s)	1298
BfmI	CTRYAG	1 cut(s)	1264
BfuAI	ACCTGC	2 cut(s)	596, 836
BfuI	GTATCC	1 cut(s)	659
BglII	AGATCT	1 cut(s)	1204
BisI	GCNGC	6 cut(s)	78, 81, 117, 251, 816, 852
BlsI	GCNGC	6 cut(s)	79, 82, 118, 252, 817, 853
BmcAI	AGTACT	1 cut(s)	1144
Bme1390I	CCNGG	5 cut(s)	615, 675, 888, 1136, 1380
Bme18I	GGWCC	2 cut(s)	1257, 1487
BmeRI	GACNNNNNGTC	1 cut(s)	129
BmgBI	CACGTC	1 cut(s)	136
BmgT120I	GGNCC	4 cut(s)	784, 862, 1257, 1487
BmiI	GGNNCC	4 cut(s)	68, 799, 864, 924
BmrFI	CCNGG	5 cut(s)	615, 675, 888, 1136, 1380
BmrI	ACTGGG	2 cut(s)	477, 1064
BmsI	GCATC	3 cut(s)	49, 462, 484
BmuI	ACTGGG	2 cut(s)	477, 1064
BpiI	GAAGAC	1 cut(s)	771
BplI	GAGNNNNNCTC	2 cut(s)	679, 711
Bpu10I	CCTNAGC	1 cut(s)	1253
BpuEI	CTTGAG	4 cut(s)	314, 775, 1467, 1500
BpuMI	CCSGG	2 cut(s)	615, 1380
BsaBI	GATNNNNATC	3 cut(s)	360, 696, 731
BsaHI	GRCGYC	2 cut(s)	107, 299
BsaJI	CCNNGG	3 cut(s)	78, 926, 1566
BsaXI	ACNNNNNCTCC	4 cut(s)	220, 250, 1374, 1404
Bsc4I	CCNNNNNNNGG	3 cut(s)	128, 680, 1409
Bse1I	ACTGG	5 cut(s)	45, 483, 1059, 1294, 1490
Bse3DI	GCAATG	2 cut(s)	201, 629
Bse8I	GATNNNNATC	3 cut(s)	360, 696, 731
BseBI	CCWGG	3 cut(s)	675, 888, 1136
BseDI	CCNNGG	3 cut(s)	78, 926, 1566
BseGI	GGATG	7 cut(s)	64, 239, 697, 1072, 1120, 1329, 1333
BseJI	GATNNNNATC	3 cut(s)	360, 696, 731
BseLI	CCNNNNNNNGG	3 cut(s)	128, 680, 1409
BseMI	GCAATG	2 cut(s)	201, 629
BseMII	CTCAG	2 cut(s)	258, 1267
BseNI	ACTGG	5 cut(s)	45, 483, 1059, 1294, 1490
BseRI	GAGGAG	2 cut(s)	567, 1136
BseX3I	CGGCCG	1 cut(s)	81
BseXI	GCAGC	4 cut(s)	128, 262, 802, 863
BseYI	CCCAGC	3 cut(s)	544, 701, 781
BsgI	GTGCAG	4 cut(s)	269, 488, 870, 1235
Bsh1236I	CGCG	3 cut(s)	80, 360, 1369
Bsh1285I	CGRYCG	1 cut(s)	84
BshFI	GGCC	6 cut(s)	44, 83, 786, 863, 1302, 1413
BsiEI	CGRYCG	1 cut(s)	84
BsiSI	CCGG	6 cut(s)	141, 152, 350, 365, 614, 1380
BslFI	GGGAC	2 cut(s)	465, 527
BslI	CCNNNNNNNGG	3 cut(s)	128, 680, 1409
BsmAI	GTCTC	2 cut(s)	142, 290
BsmBI	CGTCTC	2 cut(s)	142, 290
BsmFI	GGGAC	2 cut(s)	465, 527
BsmI	GAATGC	1 cut(s)	1448
BsnI	GGCC	6 cut(s)	44, 83, 786, 863, 1302, 1413
Bsp19I	CCATGG	1 cut(s)	926
Bsp68I	TCGCGA	1 cut(s)	360
BspACI	CCGC	7 cut(s)	5, 78, 80, 128, 652, 1132, 1369
BspANI	GGCC	6 cut(s)	44, 83, 786, 863, 1302, 1413
BspCNI	CTCAG	2 cut(s)	259, 1266
BspFNI	CGCG	3 cut(s)	80, 360, 1369
BspLI	GGNNCC	4 cut(s)	68, 799, 864, 924
BspMI	ACCTGC	2 cut(s)	596, 836
BspPI	GGATC	9 cut(s)	25, 61, 74, 80, 183, 356, 363, 686, 1123
BspQI	GCTCTTC	3 cut(s)	1077, 1092, 1530
BsrDI	GCAATG	2 cut(s)	201, 629
BsrI	ACTGG	5 cut(s)	45, 483, 1059, 1294, 1490
BssECI	CCNNGG	3 cut(s)	78, 926, 1566
BssNI	GRCGYC	2 cut(s)	107, 299
BssSI	CACGAG	1 cut(s)	530
BssT1I	CCWWGG	1 cut(s)	926
Bst2BI	CACGAG	1 cut(s)	530
Bst2UI	CCWGG	3 cut(s)	675, 888, 1136
Bst4CI	ACNGT	1 cut(s)	1268
Bst6I	CTCTTC	6 cut(s)	455, 633, 897, 1077, 1092, 1530
BstACI	GRCGYC	2 cut(s)	107, 299
BstC8I	GCNNGC	1 cut(s)	807
BstDEI	CTNAG	5 cut(s)	267, 821, 897, 1182, 1253
BstDSI	CCRYGG	3 cut(s)	78, 926, 1566
BstF5I	GGATG	7 cut(s)	64, 239, 697, 1072, 1120, 1329, 1333
BstFNI	CGCG	3 cut(s)	80, 360, 1369
BstHHI	GCGC	1 cut(s)	308
BstMAI	GTCTC	2 cut(s)	142, 290
BstMCI	CGRYCG	1 cut(s)	84
BstMWI	GCNNNNNNNGC	8 cut(s)	113, 125, 298, 413, 806, 815, 851, 860
BstNI	CCWGG	3 cut(s)	675, 888, 1136
BstNSI	RCATGY	1 cut(s)	809
BstSCI	CCNGG	5 cut(s)	613, 673, 886, 1134, 1378
BstSFI	CTRYAG	1 cut(s)	1264
BstUI	CGCG	3 cut(s)	80, 360, 1369
BstV1I	GCAGC	4 cut(s)	128, 262, 802, 863
BstV2I	GAAGAC	1 cut(s)	771
BstX2I	RGATCY	2 cut(s)	66, 1204
BstXI	CCANNNNNNTGG	2 cut(s)	52, 794
BstYI	RGATCY	2 cut(s)	66, 1204
BstZI	CGGCCG	1 cut(s)	81
BsuI	GTATCC	1 cut(s)	659
BsuRI	GGCC	6 cut(s)	44, 83, 786, 863, 1302, 1413
BtgI	CCRYGG	3 cut(s)	78, 926, 1566
BtrI	CACGTC	1 cut(s)	136
BtsCI	GGATG	7 cut(s)	64, 239, 697, 1072, 1120, 1329, 1333
BtsIMutI	CAGTG	5 cut(s)	490, 566, 1052, 1273, 1356
BtuMI	TCGCGA	1 cut(s)	360
BveI	ACCTGC	2 cut(s)	596, 836
Cac8I	GCNNGC	1 cut(s)	807
CaiI	CAGNNNCTG	1 cut(s)	1355
CfoI	GCGC	1 cut(s)	308
Cfr13I	GGNCC	4 cut(s)	784, 862, 1257, 1487
Cfr42I	CCGCGG	1 cut(s)	81
CseI	GACGC	3 cut(s)	96, 303, 307
Csp6I	GTAC	5 cut(s)	277, 331, 497, 952, 1143
CspCI	CAANNNNNGTGG	2 cut(s)	1500, 1535
CviAII	CATG	7 cut(s)	437, 494, 802, 806, 892, 927, 1022
CviQI	GTAC	5 cut(s)	277, 331, 497, 952, 1143
DdeI	CTNAG	5 cut(s)	267, 821, 897, 1182, 1253
DraIII	CACNNNGTG	1 cut(s)	1572
DriI	GACNNNNNGTC	1 cut(s)	129
EaeI	YGGCCR	2 cut(s)	42, 81
EagI	CGGCCG	1 cut(s)	81
Eam1104I	CTCTTC	6 cut(s)	455, 633, 897, 1077, 1092, 1530
Eam1105I	GACNNNNNGTC	1 cut(s)	129
EarI	CTCTTC	6 cut(s)	455, 633, 897, 1077, 1092, 1530
EciI	GGCGGA	2 cut(s)	20, 1121
EclXI	CGGCCG	1 cut(s)	81
Eco130I	CCWWGG	1 cut(s)	926
Eco32I	GATATC	1 cut(s)	733
Eco47I	GGWCC	2 cut(s)	1257, 1487
Eco52I	CGGCCG	1 cut(s)	81
Eco57I	CTGAAG	2 cut(s)	1193, 1554
EcoO109I	RGGNCCY	1 cut(s)	1257
EcoRII	CCWGG	3 cut(s)	673, 886, 1134
EcoRV	GATATC	1 cut(s)	733
EcoT14I	CCWWGG	1 cut(s)	926
EcoT22I	ATGCAT	2 cut(s)	477, 807
ErhI	CCWWGG	1 cut(s)	926
Esp3I	CGTCTC	2 cut(s)	142, 290
FaeI	CATG	7 cut(s)	440, 497, 805, 809, 895, 930, 1025
FaqI	GGGAC	2 cut(s)	465, 527
FatI	CATG	7 cut(s)	436, 493, 801, 805, 891, 926, 1021
FauI	CCCGC	2 cut(s)	121, 1362
FauNDI	CATATG	2 cut(s)	664, 1313
FbaI	TGATCA	2 cut(s)	657, 1330
Fnu4HI	GCNGC	6 cut(s)	78, 81, 117, 251, 816, 852
FokI	GGATG	7 cut(s)	71, 246, 684, 1079, 1127, 1336, 1340
Fsp4HI	GCNGC	6 cut(s)	78, 81, 117, 251, 816, 852
FspBI	CTAG	1 cut(s)	1298
GlaI	GCGC	1 cut(s)	307
GluI	GCNGC	6 cut(s)	78, 81, 117, 251, 816, 852
GsaI	CCCAGC	3 cut(s)	548, 705, 785
HaeIII	GGCC	6 cut(s)	44, 83, 786, 863, 1302, 1413
HapII	CCGG	6 cut(s)	141, 152, 350, 365, 614, 1380
HgaI	GACGC	3 cut(s)	96, 303, 307
HhaI	GCGC	1 cut(s)	308
Hin1I	GRCGYC	2 cut(s)	107, 299
Hin1II	CATG	7 cut(s)	440, 497, 805, 809, 895, 930, 1025
Hin6I	GCGC	1 cut(s)	306
HinP1I	GCGC	1 cut(s)	306
HincII	GTYRAC	1 cut(s)	1229
HindII	GTYRAC	1 cut(s)	1229
HindIII	AAGCTT	2 cut(s)	290, 1003
HinfI	GANTC	7 cut(s)	96, 211, 272, 385, 709, 1124, 1559
HpaII	CCGG	6 cut(s)	141, 152, 350, 365, 614, 1380
HphI	GGTGA	2 cut(s)	22, 394
Hpy166II	GTNNAC	3 cut(s)	1229, 1283, 1461
Hpy188I	TCNGA	7 cut(s)	71, 95, 163, 561, 1335, 1475, 1534
Hpy188III	TCNNGA	7 cut(s)	100, 359, 506, 530, 597, 833, 1014
Hpy8I	GTNNAC	3 cut(s)	1229, 1283, 1461
Hpy99I	CGWCG	4 cut(s)	106, 112, 127, 319
HpyAV	CCTTC	6 cut(s)	166, 507, 933, 1270, 1403, 1517
HpyCH4III	ACNGT	1 cut(s)	1268
HpyCH4IV	ACGT	1 cut(s)	135
HpyF10VI	GCNNNNNNNGC	8 cut(s)	113, 125, 298, 413, 806, 815, 851, 860
HpyF3I	CTNAG	5 cut(s)	267, 821, 897, 1182, 1253
HpySE526I	ACGT	1 cut(s)	135
Hsp92I	GRCGYC	2 cut(s)	107, 299
Hsp92II	CATG	7 cut(s)	440, 497, 805, 809, 895, 930, 1025
HspAI	GCGC	1 cut(s)	306
Ksp22I	TGATCA	2 cut(s)	657, 1330
KspI	CCGCGG	1 cut(s)	81
LguI	GCTCTTC	3 cut(s)	1077, 1092, 1530
LmnI	GCTCC	5 cut(s)	154, 580, 797, 1382, 1404
Lsp1109I	GCAGC	4 cut(s)	128, 262, 802, 863
LweI	GCATC	3 cut(s)	49, 462, 484
MaeI	CTAG	1 cut(s)	1298
MaeII	ACGT	1 cut(s)	135
MaeIII	GTNAC	4 cut(s)	32, 131, 1351, 1504
MboII	GAAGA	9 cut(s)	472, 650, 662, 776, 914, 1094, 1109, 1199, 1547
MflI	RGATCY	2 cut(s)	66, 1204
MlsI	TGGCCA	1 cut(s)	44
MluCI	AATT	7 cut(s)	618, 870, 1029, 1071, 1092, 1239, 1528
MluNI	TGGCCA	1 cut(s)	44
MlyI	GAGTC	2 cut(s)	266, 1133
MmeI	TCCRAC	1 cut(s)	1535
Mox20I	TGGCCA	1 cut(s)	44
Mph1103I	ATGCAT	2 cut(s)	477, 807
MroXI	GAANNNNTTC	2 cut(s)	26, 341
MscI	TGGCCA	1 cut(s)	44
MseI	TTAA	6 cut(s)	183, 621, 714, 873, 1244, 1494
MslI	CAYNNNNRTG	1 cut(s)	792
Msp20I	TGGCCA	1 cut(s)	44
MspA1I	CMGCKG	1 cut(s)	80
MspI	CCGG	6 cut(s)	141, 152, 350, 365, 614, 1380
MspR9I	CCNGG	5 cut(s)	615, 675, 888, 1136, 1380
Mva1269I	GAATGC	1 cut(s)	1448
MvaI	CCWGG	3 cut(s)	675, 888, 1136
MvnI	CGCG	3 cut(s)	80, 360, 1369
MwoI	GCNNNNNNNGC	8 cut(s)	113, 125, 298, 413, 806, 815, 851, 860
NciI	CCSGG	2 cut(s)	615, 1380
NcoI	CCATGG	1 cut(s)	926
NdeI	CATATG	2 cut(s)	664, 1313
NlaIII	CATG	7 cut(s)	440, 497, 805, 809, 895, 930, 1025
NlaIV	GGNNCC	4 cut(s)	68, 799, 864, 924
NmuCI	GTSAC	3 cut(s)	32, 131, 1351
NruI	TCGCGA	1 cut(s)	360
NsiI	ATGCAT	2 cut(s)	477, 807
NspI	RCATGY	1 cut(s)	809
OliI	CACNNNNGTG	1 cut(s)	792
PaeI	GCATGC	1 cut(s)	809
PaqCI	CACCTGC	1 cut(s)	836
PciSI	GCTCTTC	3 cut(s)	1077, 1092, 1530
PcsI	WCGNNNNNNNCGW	2 cut(s)	81, 107
PctI	GAATGC	1 cut(s)	1448
PdmI	GAANNNNTTC	2 cut(s)	26, 341
PfeI	GAWTC	5 cut(s)	96, 211, 385, 709, 1559
PflFI	GACNNNGTC	1 cut(s)	106
PkrI	GCNGC	6 cut(s)	79, 82, 118, 252, 817, 853
PleI	GAGTC	2 cut(s)	266, 1132
PpsI	GAGTC	2 cut(s)	266, 1132
PpuMI	RGGWCCY	1 cut(s)	1257
PshBI	ATTAAT	1 cut(s)	873
Psp5II	RGGWCCY	1 cut(s)	1257
Psp6I	CCWGG	3 cut(s)	673, 886, 1134
PspFI	CCCAGC	3 cut(s)	544, 701, 781
PspGI	CCWGG	3 cut(s)	673, 886, 1134
PspN4I	GGNNCC	4 cut(s)	68, 799, 864, 924
PspPI	GGNCC	4 cut(s)	784, 862, 1257, 1487
PspPPI	RGGWCCY	1 cut(s)	1257
PstNI	CAGNNNCTG	1 cut(s)	1355
PsuI	RGATCY	2 cut(s)	66, 1204
PsyI	GACNNNGTC	1 cut(s)	106
RruI	TCGCGA	1 cut(s)	360
RsaI	GTAC	5 cut(s)	278, 332, 498, 953, 1144
RsaNI	GTAC	5 cut(s)	277, 331, 497, 952, 1143
RseI	CAYNNNNRTG	1 cut(s)	792
SacII	CCGCGG	1 cut(s)	81
SapI	GCTCTTC	3 cut(s)	1077, 1092, 1530
SaqAI	TTAA	6 cut(s)	183, 621, 714, 873, 1244, 1494
SatI	GCNGC	6 cut(s)	78, 81, 117, 251, 816, 852
Sau96I	GGNCC	4 cut(s)	784, 862, 1257, 1487
ScaI	AGTACT	1 cut(s)	1144
SchI	GAGTC	2 cut(s)	266, 1133
ScrFI	CCNGG	5 cut(s)	615, 675, 888, 1136, 1380
SfaNI	GCATC	3 cut(s)	49, 462, 484
SfcI	CTRYAG	1 cut(s)	1264
Sfr303I	CCGCGG	1 cut(s)	81
SgrBI	CCGCGG	1 cut(s)	81
SinI	GGWCC	2 cut(s)	1257, 1487
SmiMI	CAYNNNNRTG	1 cut(s)	792
SmlI	CTYRAG	4 cut(s)	293, 790, 1482, 1515
SmoI	CTYRAG	4 cut(s)	293, 790, 1482, 1515
SphI	GCATGC	1 cut(s)	809
Sse9I	AATT	7 cut(s)	618, 870, 1029, 1071, 1092, 1239, 1528
SsiI	CCGC	7 cut(s)	5, 78, 80, 128, 652, 1132, 1369
SspMI	CTAG	1 cut(s)	1298
StyD4I	CCNGG	5 cut(s)	613, 673, 886, 1134, 1378
StyI	CCWWGG	1 cut(s)	926
TaaI	ACNGT	1 cut(s)	1268
TaiI	ACGT	1 cut(s)	138
TaqI	TCGA	5 cut(s)	20, 101, 451, 1080, 1127
TasI	AATT	7 cut(s)	618, 870, 1029, 1071, 1092, 1239, 1528
TatI	WGTACW	3 cut(s)	496, 951, 1142
TauI	GCSGC	2 cut(s)	80, 83
TfiI	GAWTC	5 cut(s)	96, 211, 385, 709, 1559
Tru1I	TTAA	6 cut(s)	183, 621, 714, 873, 1244, 1494
Tru9I	TTAA	6 cut(s)	183, 621, 714, 873, 1244, 1494
TscAI	CASTG	5 cut(s)	490, 573, 1059, 1273, 1356
TseFI	GTSAC	3 cut(s)	32, 131, 1351
TseI	GCWGC	4 cut(s)	116, 250, 815, 851
Tsp45I	GTSAC	3 cut(s)	32, 131, 1351
TspDTI	ATGAA	7 cut(s)	388, 582, 897, 923, 1083, 1422, 1455
TspGWI	ACGGA	1 cut(s)	20
TspRI	CASTG	5 cut(s)	490, 573, 1059, 1273, 1356
Tth111I	GACNNNGTC	1 cut(s)	106
VpaK11BI	GGWCC	2 cut(s)	1257, 1487
VspI	ATTAAT	1 cut(s)	873
XapI	RAATTY	2 cut(s)	1071, 1239
XceI	RCATGY	1 cut(s)	809
XmnI	GAANNNNTTC	2 cut(s)	26, 341
XspI	CTAG	1 cut(s)	1298
ZrmI	AGTACT	1 cut(s)	1144
Zsp2I	ATGCAT	2 cut(s)	477, 807

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.