Rorug03G0156400

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0001246
Physical Location & Seq
Forward (+)
12883693 .. 12885963
2271 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0156400.1

Sequence Viewer

Length: 2271 bp
ATGAAAATATTCAAAGCCTCAAAACCATTGACCTTCAACTACAGTCAGCCACCTTCAACCCTTTTACCCCACTTCAAAAACAAACTCTTTGGCAATGACTACATAACCTCCTTGTGTAGACAGAAGCTTTACAGAGAAGCCCTTCAAGCATTTGACTTTCTAGACAAGAACACCAATTTCAAAGTGTTTCCCAGCACTTATGCTAATTTGGTTTCCGCTTGCTCATTTTTAAGGTCTATAGAACATGGTAGGAGAATCCATCATCATATTTTGGGGTCCAATTGTGAGCAAGACGTTGTTCTTAAGAATCACATTCTCAACATGTATGGGAAATGTGGGTCGTTTTGGGATGCAAGGAAGGTATTTGATGAAATGCCTGAGAGAAATGTGGTGTCTTGGACTTCACTGATCGCTGGGTATTCACAGAATAGGCAAGAGGTTAAAGCAGTTGAGTTGTATTTCCAAATGCTTCGATCGGGTTGTAGGCCTGATCAGTTTACTTTCGGAAGCATAGTGAAAGCGTGCTCGGGTTTGGGGAATGTGTGGTTGGGGAGACAACTCCATGCCCATGTTGTGAAATCAGAAACTGGTTCACACCCTATTGCACAAAATGCGCTTACTTCAATGTACACAAAGTTTGGTCTGATTGCAGATGCATTTGATGTGTTTACGCGTGTTGCGATGAAGGATTTGATTTCTTGGGCTTCAATCATTGCAGGGTTTTCGCAACTTGGTTATGAGAAAGAAGCTTTGGCTCATTTTAAGGAAATGCTGTGTCAGGGTGCTCACACGCCGAATGAGTTTATATTTGGAAGTGCTTTTAGTGCGTGTAGCGGTCTTGTTCAACCGGAATATGGGAGGCAGATACATGGGATGTGCATAAAGTTTGGATTAGGGAGAGACAATTTTGCTGGATGCTCCCTTTGTGACATGTATGCAAAATGTGGGCATTTAGAATCTGCAAGAACTGTATTTTGTCACATAGACCGACCTGATTTGGTGTCCTGGAATGCAATGATCTCAGGGTGTTCTAGTGTTGGAGATGCCAATGAAGCCGTATCGTTCTTTTCTCGGATGCAGCATATGAGACTAATCCCCGATGAAGTTAGTGTTCTCTCTGTACTTTCTGCTTGCACGAGCTCTCCAACACTTTCTCAGGGTAGACAGGTTCACTCCTACATTATCAAGGCAGCTTTTGATTTCACTGTCGCTGTGTGTAATGCTTTGCTAACAATGTATGCAAAGTGTTCAAATCTCGATGATGCATTTGTTGTGTTTGAAAATATGAGAAATCATACTGATTCAGTTTCTTGGAATGCCATTATTACAGCGTGCATGCAGCACAACCAAGCTGGAGAAGTTTTCAGATTATTGAAGATAATGCTTAGTTCTGAAATTAGGCCTGATTATATTACTTTAAGTAATGTAATTGGAGCATGTGCAGATATAGCATCTCTGGAAGTTGGGAATCAAATTCATTGCTTTACTGTGAAAAGTGGGTTTGTACTTGGTGTTACTGTCAGCAATGGATTGGTTGACATGTATTCAAAGTGTGGATCGCTTGAAAGTGCCAGAAAGCTCTTTAGTTTGATGGAGAATCCAGATGTTGTGTCATGGAGTAGTTTAATTATGGGTTATGCTCAGTTCGGATGTGGAGAGGAAGCTCTTGAGCTGTTTAAAACAATGAAAGCATTGGGTGTAAAACCAAATGAAGTTACAATGGTGGGGGTCCTTACTGCTTGCAGTCATATTGGACTGGTTGAAGAAGGGCGGCAATTGTATAAAACCATGGAATCTGAACATGGTATTGTGCCGACAAGAGAGCATTGTTCTTGTATGGTTGACTTACTTGCTCGTGCCGGATGCTTACGTGAAGCGGAGGAGTTCATCAAGAAAATGACATTTGAACCCGACATTGTGGTGTGGAAGACTCTACTAGCTGCCTGCAAAACCTGTGGGAACACTGAAATAGGAAAACAGGCTGCAGAGAATGTACTAAAACTAGATCCTTCCAATTCTGCTGCACTTGTGTTACTTTGCAACATCAATGCTTCTTCCGGCAGATGGGATGAAGTTGCCAGGTTGAGGAATATGATGCGAGAAAGTGGCGTAAAGAAAGTTCCAGGTCAGAGCTGGATTGAAGTCAAGGATAGGATCCATGTATTTTTAGTTGAAGATAGTTCGCACCCTGAGAGGGGTCGAATATATGCAATGCTAGAGGAGTTGTGGTTGCAGATGTTGGATGATGGTTGTGATCCACTTCAGCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

756

Amino Acids

84.12

Weight (kDa)

6.66

Isoelectric Point (pI)

38.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 128 - 175 4.4e-11 PPR repeat family
PPR PF01535 131 - 161 1.5e-06 PPR repeat
PPR_2 PF13041 331 - 378 2e-08 PPR repeat family
PPR PF01535 334 - 362 1.3e-06 PPR repeat
PPR_2 PF13041 434 - 481 2.8e-08 PPR repeat family
PPR_2 PF13041 534 - 582 4.6e-11 PPR repeat family
PPR PF01535 537 - 567 4.8e-08 PPR repeat
E_motif PF20431 654 - 714 1.5e-18 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 118, 1162
AccII CGCG 1 cut(s) 673
AciI CCGC 4 cut(s) 216, 834, 1771, 1877
AclWI GGATC 5 cut(s) 1564, 2000, 2149, 2162, 2249
AcsI RAATTY 1 cut(s) 1473
AcuI CTGAAG 1 cut(s) 2246
AfaI GTAC 4 cut(s) 629, 1122, 1506, 1995
AfiI CCNNNNNNNGG 5 cut(s) 854, 2064, 2085, 2194, 2195
AflII CTTAAG 1 cut(s) 302
AflIII ACRYGT 4 cut(s) 321, 671, 930, 1539
AjnI CCWGG 3 cut(s) 1004, 2078, 2122
AjuI GAANNNNNNNTTGG 4 cut(s) 530, 562, 734, 766
Alw21I GWGCWC 3 cut(s) 527, 787, 1142
Alw26I GTCTC 3 cut(s) 547, 894, 1081
AlwI GGATC 5 cut(s) 1564, 2000, 2149, 2162, 2249
AlwNI CAGNNNCTG 1 cut(s) 587
Ama87I CYCGRG 1 cut(s) 526
AoxI GGCC 2 cut(s) 485, 1400
ApeKI GCWGC 6 cut(s) 1078, 1190, 1339, 1940, 1982, 2021
ApoI RAATTY 1 cut(s) 1473
Asp700I GAANNNNTTC 2 cut(s) 8, 141
AspLEI GCGC 1 cut(s) 616
AspS9I GGNCC 2 cut(s) 276, 1729
AvaI CYCGRG 1 cut(s) 526
AvaII GGWCC 2 cut(s) 276, 1729
BamHI GGATCC 1 cut(s) 2154
BanII GRGCYC 1 cut(s) 1142
BauI CACGAG 2 cut(s) 1135, 1854
BbsI GAAGAC 1 cut(s) 1934
Bbv12I GWGCWC 3 cut(s) 527, 787, 1142
BbvI GCAGC 6 cut(s) 1090, 1202, 1351, 1927, 1969, 2008
BccI CCATC 4 cut(s) 267, 1585, 2058, 2240
BceAI ACGGC 1 cut(s) 1040
BcgI CGANNNNNNTGC 2 cut(s) 705, 739
BciT130I CCWGG 3 cut(s) 1006, 2080, 2124
BclI TGATCA 1 cut(s) 490
BcoDI GTCTC 3 cut(s) 547, 894, 1081
BfaI CTAG 5 cut(s) 161, 1032, 1937, 2003, 2216
BfmI CTRYAG 3 cut(s) 40, 237, 1983
BfrI CTTAAG 1 cut(s) 302
BisI GCNGC 7 cut(s) 1079, 1191, 1340, 1772, 1941, 1983, 2022
BlsI GCNGC 7 cut(s) 1080, 1192, 1341, 1773, 1942, 1984, 2023
Bme1390I CCNGG 3 cut(s) 1006, 2080, 2124
Bme18I GGWCC 2 cut(s) 276, 1729
BmeT110I CYCGRG 1 cut(s) 526
BmgT120I GGNCC 2 cut(s) 276, 1729
BmiI GGNNCC 3 cut(s) 277, 1730, 2156
BmrFI CCNGG 3 cut(s) 1006, 2080, 2124
BmsI GCATC 9 cut(s) 340, 643, 905, 1033, 1065, 1252, 1460, 1853, 2085
BpiI GAAGAC 1 cut(s) 1934
BpmI CTGGAG 1 cut(s) 1374
BpuEI CTTGAG 1 cut(s) 1688
BsaAI YACGTR 1 cut(s) 1871
BsaJI CCNNGG 1 cut(s) 1788
BsaWI WCCGGW 1 cut(s) 847
BsaXI ACNNNNNCTCC 6 cut(s) 92, 122, 1126, 1156, 2213, 2243
Bsc4I CCNNNNNNNGG 5 cut(s) 854, 2064, 2085, 2194, 2195
Bse1I ACTGG 2 cut(s) 592, 1761
Bse3DI GCAATG 6 cut(s) 100, 711, 1020, 1477, 1531, 2217
BseBI CCWGG 3 cut(s) 1006, 2080, 2124
BseDI CCNNGG 1 cut(s) 1788
BseGI GGATG 8 cut(s) 355, 879, 920, 1080, 1655, 1868, 2074, 2248
BseLI CCNNNNNNNGG 5 cut(s) 854, 2064, 2085, 2194, 2195
BseMI GCAATG 6 cut(s) 100, 711, 1020, 1477, 1531, 2217
BseMII CTCAG 5 cut(s) 369, 1035, 1169, 1655, 2181
BseNI ACTGG 2 cut(s) 592, 1761
BseRI GAGGAG 2 cut(s) 1895, 2234
BseXI GCAGC 6 cut(s) 1090, 1202, 1351, 1927, 1969, 2008
BseYI CCCAGC 2 cut(s) 191, 413
BsgI GTGCAG 2 cut(s) 1461, 2007
Bsh1236I CGCG 1 cut(s) 673
Bsh1285I CGRYCG 1 cut(s) 476
BshFI GGCC 2 cut(s) 487, 1402
BsiEI CGRYCG 1 cut(s) 476
BsiHKAI GWGCWC 3 cut(s) 527, 787, 1142
BsiHKCI CYCGRG 1 cut(s) 526
BsiSI CCGG 3 cut(s) 848, 1860, 2058
BslI CCNNNNNNNGG 5 cut(s) 854, 2064, 2085, 2194, 2195
BsmAI GTCTC 3 cut(s) 547, 894, 1081
BsmI GAATGC 2 cut(s) 1015, 1321
BsnI GGCC 2 cut(s) 487, 1402
BsoBI CYCGRG 1 cut(s) 526
Bsp1286I GDGCHC 3 cut(s) 527, 787, 1142
Bsp1407I TGTACA 1 cut(s) 627
Bsp143I GATC 8 cut(s) 408, 473, 490, 1017, 1556, 2005, 2154, 2254
Bsp19I CCATGG 1 cut(s) 1788
BspACI CCGC 4 cut(s) 216, 834, 1771, 1877
BspANI GGCC 2 cut(s) 487, 1402
BspCNI CTCAG 5 cut(s) 370, 1034, 1168, 1654, 2182
BspFNI CGCG 1 cut(s) 673
BspLI GGNNCC 3 cut(s) 277, 1730, 2156
BspMAI CTGCAG 1 cut(s) 1987
BspPI GGATC 5 cut(s) 1564, 2000, 2149, 2162, 2249
BspTI CTTAAG 1 cut(s) 302
BsrDI GCAATG 6 cut(s) 100, 711, 1020, 1477, 1531, 2217
BsrGI TGTACA 1 cut(s) 627
BsrI ACTGG 2 cut(s) 592, 1761
BssECI CCNNGG 1 cut(s) 1788
BssMI GATC 8 cut(s) 408, 473, 490, 1017, 1556, 2005, 2154, 2254
BssSI CACGAG 2 cut(s) 1135, 1854
BssT1I CCWWGG 1 cut(s) 1788
Bst2BI CACGAG 2 cut(s) 1135, 1854
Bst2UI CCWGG 3 cut(s) 1006, 2080, 2124
Bst4CI ACNGT 5 cut(s) 44, 970, 1207, 1489, 1519
BstAFI CTTAAG 1 cut(s) 302
BstAPI GCANNNNNTGC 1 cut(s) 611
BstAUI TGTACA 1 cut(s) 627
BstBAI YACGTR 1 cut(s) 1871
BstC8I GCNNGC 7 cut(s) 220, 523, 1132, 1333, 1337, 1741, 1945
BstDEI CTNAG 6 cut(s) 378, 1021, 1155, 1385, 1641, 2190
BstDSI CCRYGG 1 cut(s) 1788
BstF5I GGATG 8 cut(s) 355, 879, 920, 1080, 1655, 1868, 2074, 2248
BstFNI CGCG 1 cut(s) 673
BstHHI GCGC 1 cut(s) 616
BstKTI GATC 8 cut(s) 411, 476, 493, 1020, 1559, 2008, 2157, 2257
BstMAI GTCTC 3 cut(s) 547, 894, 1081
BstMBI GATC 8 cut(s) 408, 473, 490, 1017, 1556, 2005, 2154, 2254
BstMCI CGRYCG 1 cut(s) 476
BstMWI GCNNNNNNNGC 5 cut(s) 146, 611, 824, 1052, 1448
BstNI CCWGG 3 cut(s) 1006, 2080, 2124
BstNSI RCATGY 5 cut(s) 325, 934, 1339, 1440, 1543
BstSCI CCNGG 3 cut(s) 1004, 2078, 2122
BstSFI CTRYAG 3 cut(s) 40, 237, 1983
BstUI CGCG 1 cut(s) 673
BstV1I GCAGC 6 cut(s) 1090, 1202, 1351, 1927, 1969, 2008
BstV2I GAAGAC 1 cut(s) 1934
BstX2I RGATCY 2 cut(s) 2005, 2154
BstYI RGATCY 2 cut(s) 2005, 2154
BsuRI GGCC 2 cut(s) 487, 1402
BtgI CCRYGG 1 cut(s) 1788
BtgZI GCGATG 1 cut(s) 695
BtsCI GGATG 8 cut(s) 355, 879, 920, 1080, 1655, 1868, 2074, 2248
BtsIMutI CAGTG 3 cut(s) 404, 1203, 1962
Cac8I GCNNGC 7 cut(s) 220, 523, 1132, 1333, 1337, 1741, 1945
CaiI CAGNNNCTG 1 cut(s) 587
CfoI GCGC 1 cut(s) 616
Cfr13I GGNCC 2 cut(s) 276, 1729
Csp6I GTAC 4 cut(s) 628, 1121, 1505, 1994
CspCI CAANNNNNGTGG 2 cut(s) 1936, 1971
CviQI GTAC 4 cut(s) 628, 1121, 1505, 1994
DdeI CTNAG 6 cut(s) 378, 1021, 1155, 1385, 1641, 2190
DpnI GATC 8 cut(s) 410, 475, 492, 1019, 1558, 2007, 2156, 2256
DpnII GATC 8 cut(s) 408, 473, 490, 1017, 1556, 2005, 2154, 2254
DraI TTTAAA 1 cut(s) 1678
Ecl136II GAGCTC 1 cut(s) 1140
Eco130I CCWWGG 1 cut(s) 1788
Eco147I AGGCCT 2 cut(s) 487, 1402
Eco24I GRGCYC 1 cut(s) 1142
Eco47I GGWCC 2 cut(s) 276, 1729
Eco53kI GAGCTC 1 cut(s) 1140
Eco57I CTGAAG 1 cut(s) 2246
Eco88I CYCGRG 1 cut(s) 526
EcoICRI GAGCTC 1 cut(s) 1140
EcoO109I RGGNCCY 1 cut(s) 1729
EcoRII CCWGG 3 cut(s) 1004, 2078, 2122
EcoT14I CCWWGG 1 cut(s) 1788
EcoT22I ATGCAT 2 cut(s) 658, 1267
EcoT38I GRGCYC 1 cut(s) 1142
ErhI CCWWGG 1 cut(s) 1788
FauNDI CATATG 1 cut(s) 1083
FbaI TGATCA 1 cut(s) 490
FblI GTMKAC 2 cut(s) 118, 1162
Fnu4HI GCNGC 7 cut(s) 1079, 1191, 1340, 1772, 1941, 1983, 2022
FokI GGATG 8 cut(s) 362, 886, 927, 1087, 1662, 1875, 2081, 2255
FriOI GRGCYC 1 cut(s) 1142
Fsp4HI GCNGC 7 cut(s) 1079, 1191, 1340, 1772, 1941, 1983, 2022
FspBI CTAG 5 cut(s) 161, 1032, 1937, 2003, 2216
GlaI GCGC 1 cut(s) 615
GluI GCNGC 7 cut(s) 1079, 1191, 1340, 1772, 1941, 1983, 2022
GsaI CCCAGC 2 cut(s) 195, 417
GsuI CTGGAG 1 cut(s) 1374
HaeIII GGCC 2 cut(s) 487, 1402
HapII CCGG 3 cut(s) 848, 1860, 2058
HhaI GCGC 1 cut(s) 616
Hin6I GCGC 1 cut(s) 614
HinP1I GCGC 1 cut(s) 614
HincII GTYRAC 2 cut(s) 1537, 1843
HindII GTYRAC 2 cut(s) 1537, 1843
HindIII AAGCTT 2 cut(s) 125, 747
HinfI GANTC 8 cut(s) 255, 307, 956, 1301, 1468, 1597, 1793, 1930
HpaII CCGG 3 cut(s) 848, 1860, 2058
Hpy166II GTNNAC 9 cut(s) 119, 498, 593, 630, 669, 1163, 1171, 1537, 1843
Hpy188I TCNGA 9 cut(s) 506, 583, 645, 1074, 1367, 1393, 1649, 1798, 2130
Hpy188III TCNNGA 6 cut(s) 161, 1256, 1457, 1601, 1667, 1891
Hpy8I GTNNAC 9 cut(s) 119, 498, 593, 630, 669, 1163, 1171, 1537, 1843
HpyAV CCTTC 7 cut(s) 43, 63, 152, 352, 679, 1760, 2019
HpyCH4III ACNGT 5 cut(s) 44, 970, 1207, 1489, 1519
HpyCH4IV ACGT 2 cut(s) 294, 1870
HpyF10VI GCNNNNNNNGC 5 cut(s) 146, 611, 824, 1052, 1448
HpyF3I CTNAG 6 cut(s) 378, 1021, 1155, 1385, 1641, 2190
HpySE526I ACGT 2 cut(s) 294, 1870
HspAI GCGC 1 cut(s) 614
Ksp22I TGATCA 1 cut(s) 490
Kzo9I GATC 8 cut(s) 408, 473, 490, 1017, 1556, 2005, 2154, 2254
LmnI GCTCC 2 cut(s) 923, 1433
Lsp1109I GCAGC 6 cut(s) 1090, 1202, 1351, 1927, 1969, 2008
LweI GCATC 9 cut(s) 340, 643, 905, 1033, 1065, 1252, 1460, 1853, 2085
MaeI CTAG 5 cut(s) 161, 1032, 1937, 2003, 2216
MaeII ACGT 2 cut(s) 294, 1870
MaeIII GTNAC 5 cut(s) 926, 977, 1513, 1714, 2031
MalI GATC 8 cut(s) 410, 475, 492, 1019, 1558, 2007, 2156, 2256
MboI GATC 8 cut(s) 408, 473, 490, 1017, 1556, 2005, 2154, 2254
MboII GAAGA 5 cut(s) 1387, 1775, 1939, 2046, 2186
MfeI CAATTG 2 cut(s) 280, 1775
MflI RGATCY 2 cut(s) 2005, 2154
MhlI GDGCHC 3 cut(s) 527, 787, 1142
MluI ACGCGT 1 cut(s) 671
MlyI GAGTC 1 cut(s) 1924
MmeI TCCRAC 3 cut(s) 1018, 1169, 2220
MnlI CCTC 9 cut(s) 28, 118, 430, 852, 1651, 1873, 2079, 2187, 2212
Mph1103I ATGCAT 2 cut(s) 658, 1267
MroXI GAANNNNTTC 2 cut(s) 8, 141
MseI TTAA 7 cut(s) 230, 303, 441, 762, 1418, 1625, 1677
MslI CAYNNNNRTG 2 cut(s) 567, 1919
MspCI CTTAAG 1 cut(s) 302
MspI CCGG 3 cut(s) 848, 1860, 2058
MspR9I CCNGG 3 cut(s) 1006, 2080, 2124
MunI CAATTG 2 cut(s) 280, 1775
Mva1269I GAATGC 2 cut(s) 1015, 1321
MvaI CCWGG 3 cut(s) 1006, 2080, 2124
MvnI CGCG 1 cut(s) 673
MwoI GCNNNNNNNGC 5 cut(s) 146, 611, 824, 1052, 1448
NcoI CCATGG 1 cut(s) 1788
NdeI CATATG 1 cut(s) 1083
NdeII GATC 8 cut(s) 408, 473, 490, 1017, 1556, 2005, 2154, 2254
NlaIV GGNNCC 3 cut(s) 277, 1730, 2156
NmuCI GTSAC 2 cut(s) 926, 977
NsiI ATGCAT 2 cut(s) 658, 1267
NspI RCATGY 5 cut(s) 325, 934, 1339, 1440, 1543
PaeI GCATGC 1 cut(s) 1339
PceI AGGCCT 2 cut(s) 487, 1402
PciI ACATGT 3 cut(s) 321, 930, 1539
PcsI WCGNNNNNNNCGW 1 cut(s) 677
PctI GAATGC 2 cut(s) 1015, 1321
PdmI GAANNNNTTC 2 cut(s) 8, 141
PfeI GAWTC 7 cut(s) 255, 307, 956, 1301, 1468, 1597, 1793
PfoI TCCNGGA 1 cut(s) 1004
PkrI GCNGC 7 cut(s) 1080, 1192, 1341, 1773, 1942, 1984, 2023
Ple19I CGATCG 1 cut(s) 476
PleI GAGTC 1 cut(s) 1924
PpsI GAGTC 1 cut(s) 1924
Ppu21I YACGTR 1 cut(s) 1871
PpuMI RGGWCCY 1 cut(s) 1729
PscI ACATGT 3 cut(s) 321, 930, 1539
Psp124BI GAGCTC 1 cut(s) 1142
Psp5II RGGWCCY 1 cut(s) 1729
Psp6I CCWGG 3 cut(s) 1004, 2078, 2122
PspFI CCCAGC 2 cut(s) 191, 413
PspGI CCWGG 3 cut(s) 1004, 2078, 2122
PspN4I GGNNCC 3 cut(s) 277, 1730, 2156
PspPI GGNCC 2 cut(s) 276, 1729
PspPPI RGGWCCY 1 cut(s) 1729
PsrI GAACNNNNNNTAC 2 cut(s) 2103, 2135
PstI CTGCAG 1 cut(s) 1987
PstNI CAGNNNCTG 1 cut(s) 587
PsuI RGATCY 2 cut(s) 2005, 2154
PvuI CGATCG 1 cut(s) 476
RsaI GTAC 4 cut(s) 629, 1122, 1506, 1995
RsaNI GTAC 4 cut(s) 628, 1121, 1505, 1994
RseI CAYNNNNRTG 2 cut(s) 567, 1919
SacI GAGCTC 1 cut(s) 1142
SaqAI TTAA 7 cut(s) 230, 303, 441, 762, 1418, 1625, 1677
SatI GCNGC 7 cut(s) 1079, 1191, 1340, 1772, 1941, 1983, 2022
Sau3AI GATC 8 cut(s) 408, 473, 490, 1017, 1556, 2005, 2154, 2254
Sau96I GGNCC 2 cut(s) 276, 1729
SchI GAGTC 1 cut(s) 1924
ScrFI CCNGG 3 cut(s) 1006, 2080, 2124
SduI GDGCHC 3 cut(s) 527, 787, 1142
SfaNI GCATC 9 cut(s) 340, 643, 905, 1033, 1065, 1252, 1460, 1853, 2085
SfcI CTRYAG 3 cut(s) 40, 237, 1983
SinI GGWCC 2 cut(s) 276, 1729
SmiMI CAYNNNNRTG 2 cut(s) 567, 1919
SmlI CTYRAG 2 cut(s) 302, 1667
SmoI CTYRAG 2 cut(s) 302, 1667
SphI GCATGC 1 cut(s) 1339
SseBI AGGCCT 2 cut(s) 487, 1402
SsiI CCGC 4 cut(s) 216, 834, 1771, 1877
SspI AATATT 1 cut(s) 9
SspMI CTAG 5 cut(s) 161, 1032, 1937, 2003, 2216
SstI GAGCTC 1 cut(s) 1142
StuI AGGCCT 2 cut(s) 487, 1402
StyD4I CCNGG 3 cut(s) 1004, 2078, 2122
StyI CCWWGG 1 cut(s) 1788
TaaI ACNGT 5 cut(s) 44, 970, 1207, 1489, 1519
TaiI ACGT 2 cut(s) 297, 1873
TaqI TCGA 3 cut(s) 472, 1257, 2200
TaqII GACCGA 1 cut(s) 1002
TatI WGTACW 4 cut(s) 627, 1120, 1504, 1993
TauI GCSGC 1 cut(s) 1774
TfiI GAWTC 7 cut(s) 255, 307, 956, 1301, 1468, 1597, 1793
Tru1I TTAA 7 cut(s) 230, 303, 441, 762, 1418, 1625, 1677
Tru9I TTAA 7 cut(s) 230, 303, 441, 762, 1418, 1625, 1677
TscAI CASTG 3 cut(s) 411, 1210, 1969
TseFI GTSAC 2 cut(s) 926, 977
TseI GCWGC 6 cut(s) 1078, 1190, 1339, 1940, 1982, 2021
Tsp45I GTSAC 2 cut(s) 926, 977
TspRI CASTG 3 cut(s) 411, 1210, 1969
Vha464I CTTAAG 1 cut(s) 302
VpaK11BI GGWCC 2 cut(s) 276, 1729
XapI RAATTY 1 cut(s) 1473
XbaI TCTAGA 1 cut(s) 160
XceI RCATGY 5 cut(s) 325, 934, 1339, 1440, 1543
XcmI CCANNNNNNNNNTGG 1 cut(s) 2130
XmiI GTMKAC 2 cut(s) 118, 1162
XmnI GAANNNNTTC 2 cut(s) 8, 141
XspI CTAG 5 cut(s) 161, 1032, 1937, 2003, 2216
Zsp2I ATGCAT 2 cut(s) 658, 1267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.