Rorug03G0156600

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0001246
Physical Location & Seq
Reverse (-)
12891056 .. 12901042
9987 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0156600.1

Sequence Viewer

Length: 2037 bp
ATGCGACAGGGGCTGTTTGGTGGTCAAGAGATCGGAATCTGTGGATTGCGATCGAGCTCTGGCCAAGGATTGAAGGAGCCGTCTAAGATCGGCCAGACCAGAACTTTGGATGAACGCCTGAAACCTTTTCTGAAGGGCAAGGCACCCGGCGGTCAGCATATTGCTTGGATACTGTGCGGGTTGTCGATTCGACGTCTAGGCGGATTGCTGGCGGTGGAGAGCAGTGGCGGATCAGAGCGGCCACGACGGGCGCGGCTTAAAGATGGGGCCGATCAGTCCGACTTTGTGCCGGAGGAACTTTCCCGGCGAGGGATGGCAGGTAGAAGTAGAACTCCACATCAGCCCCATCACACCACGGCGCGGCACAATACCTCCTTCAGGCTTCAGCCCTCTATCAATTTTCTTGACATTCAAAACCCTCTCCCCATTTCTCTTCTCTGCTCCAAGACTCAACCTTTAGCTCTGTCTACAATGGCCGATGATACTACGGCTTCTCACAGAAGAGACCCTATCAAATCCTCAGTTGGGAGTGTTGCGGGACAGCGGAGGCGGCAGAATGCAATTACAGTGGGAAGAGAAAGAAGAGAATCGTTGGTTCGTGCGAAGCGCTTGTGTAGAGTGGGGACTAATGGTGACAGTGTTGATCCTCTTGACAGTGAAATGATTATCGATGAAGAGCAGCCAATCTTAGAGGCTCAAACATCTGCAGCAGTGGAAGAGTTGAAGTCTGCAGCTGCACATCAGGGGAAAGGTGCTTGGCAAAAGAGGGTGAGCGCCCTGCGAGAACTCAGGCGCTTACTGTCTAGATCAGAATTCCCTCCTGTTGATGCCGCTCTTAAAGCTGGTGCAGTGCCTTTACTAGTGCAGTGCCTCTCATTTGGCTCTCCAGATGAGCAGTTACTTGAGGCAGCTTGGTGCCTTACAAACATAGCAGCAGGGAAACCTGAGGAAACAAAAGCTTTGTTGCCAGCTTTACCACTACTTATTGCTTATCTTGGAGAAAAGAGCTCCGCGCCTGTTGCTGAGCAATGTGCATGGGCAATCGGAAACGTCGCTGGTGAAGGAGAAGAGCTGAGAAATGTTTTGCTTTCTCAGGGTGCCTTACCACCTCTTGCAAGAATGATGCTTCCAGACAAGGGTTCAACTGTGAGGACAGCTGCTTGGGCGCTGTCAAACCTAATCAAGGGACCCAATCCAAAGGCTGCAAATGAGCTCATTAGAGTTGAAGGAGTATTGGATGCAATTATACGGCACCTGAGAAAGGCAGATGATGAGTTAGCAACTGAAGTTGCATGGGTGGTTGTGTATCTCTCAGCCCTTTCAAATATTGCTACCAGTATGCTAGTGAAGAGTGATGTCCTTCAACTGCTTGTGGAAAGATTCGCGACATCCAACAGTTTACAGTTGCTTATTCCGGTGCTAAGGAGTTTAGGTAATCTTATAGCCGGTGATTCACAGACAACCCATGCTATTATTGCCCCCGGGAATGAAATCACAGGTAACATCATAGAGGTCTTGGTGAAATGTTTGAGGAGTGAACACCGGGTCCTAAAGAAGGAAGCTGCTTGGGTGCTGTCTAATATAGCTGCTGGTTCTATAGAACACAAGCAATTAATATACTCAAGTGAGGCAGTGCCATTGCTGATACGCCTTCTTTCCACAGCACCATTTGATATTCGAAAAGAAGTAGCATATGTACTAGGCAACCTCTGTGTTTCCCCTATTACACCAACAGAAGGTGATGGAAAGCCAAGTCTGATTCTGGAGCACTTGGTTTCACTTGTTGGTAGAGGATGCCTTCCTGGTTTCATTGATTTGGTTAGCTCTGTTGATACTGAAGCTGCAAGAGTAGGACTACAGTTCATGGAACTGGTTTTGAGAGGGATGCCAAATGGTGAGGGGCCAAAGCTTGTTGAGAAAGAGAATGGGATTGAAGCGATGGAAAGATTCCAGTTTCATGAAAATGAAGACCTGAGAATTATGGCAAATAGTCTAGTAGATAAGTACTTTGGAGAGGACTATGGGCTTGATGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

678

Amino Acids

73.48

Weight (kDa)

7.21

Isoelectric Point (pI)

47.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Arm PF00514 274 - 312 4.8e-07 Armadillo/beta-catenin-like repeat
Arm PF00514 358 - 393 4.6e-06 Armadillo/beta-catenin-like repeat
Arm PF00514 534 - 571 1.1e-06 Armadillo/beta-catenin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 196
Acc36I ACCTGC 1 cut(s) 308
AccB1I GGYRCC 4 cut(s) 142, 915, 1097, 1251
AccBSI CCGCTC 2 cut(s) 238, 833
AccI GTMKAC 1 cut(s) 467
AccII CGCG 4 cut(s) 253, 361, 1013, 1385
AclWI GGATC 2 cut(s) 238, 638
AcoI YGGCCR 4 cut(s) 61, 91, 239, 474
AcsI RAATTY 1 cut(s) 812
AcuI CTGAAG 5 cut(s) 152, 361, 368, 1305, 1857
AcyI GRCGYC 1 cut(s) 193
AfaI GTAC 2 cut(s) 1698, 2006
AfeI AGCGCT 1 cut(s) 608
AfiI CCNNNNNNNGG 9 cut(s) 309, 360, 378, 525, 1136, 1183, 1261, 1555, 1736
AgsI TTSAA 8 cut(s) 73, 413, 724, 1143, 1226, 1323, 1364, 1934
AhlI ACTAGT 1 cut(s) 859
AjnI CCWGG 1 cut(s) 1801
AloI GAACNNNNNNTCC 2 cut(s) 1530, 1562
Alw21I GWGCWC 4 cut(s) 59, 1010, 1215, 1770
Alw26I GTCTC 1 cut(s) 498
AlwI GGATC 2 cut(s) 238, 638
AlwNI CAGNNNCTG 1 cut(s) 13
Ama87I CYCGRG 1 cut(s) 1481
Aor51HI AGCGCT 1 cut(s) 608
AoxI GGCC 6 cut(s) 61, 91, 239, 267, 474, 1901
ApoI RAATTY 1 cut(s) 812
ArsI GACNNNNNNTTYG 2 cut(s) 88, 120
AseI ATTAAT 1 cut(s) 1613
AspLEI GCGC 7 cut(s) 253, 361, 609, 776, 795, 1015, 1168
AspS9I GGNCC 4 cut(s) 267, 1187, 1546, 1901
AsuC2I CCSGG 5 cut(s) 147, 304, 1482, 1483, 1544
AsuHPI GGTGA 7 cut(s) 644, 781, 1070, 1460, 1531, 1751, 1907
AsuII TTCGAA 1 cut(s) 1678
AvaI CYCGRG 1 cut(s) 1481
AvaII GGWCC 2 cut(s) 1187, 1546
AxyI CCTNAGG 1 cut(s) 945
BalI TGGCCA 1 cut(s) 63
BanI GGYRCC 4 cut(s) 142, 915, 1097, 1251
BanII GRGCYC 3 cut(s) 59, 1010, 1215
BbsI GAAGAC 1 cut(s) 1974
Bbv12I GWGCWC 4 cut(s) 59, 1010, 1215, 1770
BccI CCATC 5 cut(s) 257, 307, 354, 1736, 1933
BceAI ACGGC 4 cut(s) 64, 372, 504, 1265
BciT130I CCWGG 1 cut(s) 1803
BciVI GTATCC 1 cut(s) 162
BcnI CCSGG 5 cut(s) 147, 304, 1482, 1483, 1544
BcoDI GTCTC 1 cut(s) 498
BcuI ACTAGT 1 cut(s) 859
BfaI CTAG 7 cut(s) 197, 804, 860, 1343, 1700, 1994, 2035
BfmI CTRYAG 4 cut(s) 705, 729, 1596, 1856
BfoI RGCGCY 4 cut(s) 610, 777, 796, 1169
BfuAI ACCTGC 1 cut(s) 308
BfuI GTATCC 1 cut(s) 162
BlpI GCTNAGC 1 cut(s) 1023
BmcAI AGTACT 1 cut(s) 2006
Bme1390I CCNGG 6 cut(s) 147, 304, 1482, 1483, 1544, 1803
Bme18I GGWCC 2 cut(s) 1187, 1546
BmeT110I CYCGRG 1 cut(s) 1481
BmgT120I GGNCC 4 cut(s) 267, 1187, 1546, 1901
BmrFI CCNGG 6 cut(s) 147, 304, 1482, 1483, 1544, 1803
BmsI GCATC 5 cut(s) 817, 1113, 1228, 1784, 1875
BpiI GAAGAC 1 cut(s) 1974
BpmI CTGGAG 2 cut(s) 870, 1784
Bpu10I CCTNAGC 1 cut(s) 1421
Bpu1102I GCTNAGC 1 cut(s) 1023
Bpu14I TTCGAA 1 cut(s) 1678
BpuEI CTTGAG 2 cut(s) 923, 1606
BpuMI CCSGG 5 cut(s) 147, 304, 1482, 1483, 1544
Bsa29I ATCGAT 1 cut(s) 669
BsaBI GATNNNNATC 2 cut(s) 35, 49
BsaHI GRCGYC 1 cut(s) 193
BsaI GGTCTC 1 cut(s) 498
BsaJI CCNNGG 4 cut(s) 64, 354, 1480, 1481
BsaWI WCCGGW 1 cut(s) 1414
BsaXI ACNNNNNCTCC 4 cut(s) 356, 386, 1417, 1447
Bsc4I CCNNNNNNNGG 9 cut(s) 309, 360, 378, 525, 1136, 1183, 1261, 1555, 1736
Bse118I RCCGGY 1 cut(s) 1445
Bse1I ACTGG 3 cut(s) 1335, 1875, 1951
Bse21I CCTNAGG 1 cut(s) 945
Bse3DI GCAATG 2 cut(s) 1034, 1637
Bse8I GATNNNNATC 2 cut(s) 35, 49
BseBI CCWGG 1 cut(s) 1803
BseCI ATCGAT 1 cut(s) 669
BseDI CCNNGG 4 cut(s) 64, 354, 1480, 1481
BseGI GGATG 6 cut(s) 115, 318, 1243, 1388, 1799, 1890
BseJI GATNNNNATC 2 cut(s) 35, 49
BseLI CCNNNNNNNGG 9 cut(s) 309, 360, 378, 525, 1136, 1183, 1261, 1555, 1736
BseMI GCAATG 2 cut(s) 1034, 1637
BseMII CTCAG 9 cut(s) 534, 802, 936, 1014, 1064, 1106, 1247, 1326, 1964
BseNI ACTGG 3 cut(s) 1335, 1875, 1951
BseRI GAGGAG 1 cut(s) 1546
BsgI GTGCAG 3 cut(s) 720, 867, 884
Bsh1236I CGCG 4 cut(s) 253, 361, 1013, 1385
Bsh1285I CGRYCG 1 cut(s) 53
BshFI GGCC 6 cut(s) 63, 93, 241, 269, 476, 1903
BshNI GGYRCC 4 cut(s) 142, 915, 1097, 1251
BshVI ATCGAT 1 cut(s) 669
BsiEI CGRYCG 1 cut(s) 53
BsiHKAI GWGCWC 4 cut(s) 59, 1010, 1215, 1770
BsiHKCI CYCGRG 1 cut(s) 1481
BsiSI CCGG 7 cut(s) 147, 290, 304, 1415, 1446, 1482, 1543
BslFI GGGAC 3 cut(s) 552, 637, 1200
BslI CCNNNNNNNGG 9 cut(s) 309, 360, 378, 525, 1136, 1183, 1261, 1555, 1736
BsmAI GTCTC 1 cut(s) 498
BsmFI GGGAC 3 cut(s) 552, 637, 1200
BsmI GAATGC 1 cut(s) 562
BsnI GGCC 6 cut(s) 63, 93, 241, 269, 476, 1903
Bso31I GGTCTC 1 cut(s) 498
BsoBI CYCGRG 1 cut(s) 1481
Bsp119I TTCGAA 1 cut(s) 1678
Bsp1286I GDGCHC 4 cut(s) 59, 1010, 1215, 1770
Bsp143I GATC 7 cut(s) 30, 50, 87, 230, 271, 643, 806
Bsp1720I GCTNAGC 1 cut(s) 1023
Bsp68I TCGCGA 1 cut(s) 1385
BspANI GGCC 6 cut(s) 63, 93, 241, 269, 476, 1903
BspCNI CTCAG 9 cut(s) 533, 801, 937, 1015, 1065, 1105, 1248, 1325, 1965
BspDI ATCGAT 1 cut(s) 669
BspFNI CGCG 4 cut(s) 253, 361, 1013, 1385
BspHI TCATGA 1 cut(s) 1957
BspMAI CTGCAG 2 cut(s) 709, 733
BspMI ACCTGC 1 cut(s) 308
BspPI GGATC 2 cut(s) 238, 638
BspQI GCTCTTC 2 cut(s) 669, 1062
BspT104I TTCGAA 1 cut(s) 1678
BspT107I GGYRCC 4 cut(s) 142, 915, 1097, 1251
BspTNI GGTCTC 1 cut(s) 498
BsrBI CCGCTC 2 cut(s) 238, 833
BsrDI GCAATG 2 cut(s) 1034, 1637
BsrFI RCCGGY 1 cut(s) 1445
BsrI ACTGG 3 cut(s) 1335, 1875, 1951
BssAI RCCGGY 1 cut(s) 1445
BssECI CCNNGG 4 cut(s) 64, 354, 1480, 1481
BssMI GATC 7 cut(s) 30, 50, 87, 230, 271, 643, 806
BssNI GRCGYC 1 cut(s) 193
BssT1I CCWWGG 1 cut(s) 64
Bst2UI CCWGG 1 cut(s) 1803
Bst4CI ACNGT 9 cut(s) 174, 568, 638, 656, 801, 1147, 1397, 1404, 1860
Bst6I CTCTTC 8 cut(s) 438, 496, 568, 577, 669, 711, 1062, 1343
BstACI GRCGYC 1 cut(s) 193
BstBI TTCGAA 1 cut(s) 1678
BstC8I GCNNGC 2 cut(s) 210, 969
BstDSI CCRYGG 1 cut(s) 354
BstENI CCTNNNNNAGG 4 cut(s) 376, 1181, 1259, 1553
BstF5I GGATG 6 cut(s) 115, 318, 1243, 1388, 1799, 1890
BstFNI CGCG 4 cut(s) 253, 361, 1013, 1385
BstH2I RGCGCY 4 cut(s) 610, 777, 796, 1169
BstHHI GCGC 7 cut(s) 253, 361, 609, 776, 795, 1015, 1168
BstKTI GATC 7 cut(s) 33, 53, 90, 233, 274, 646, 809
BstMAI GTCTC 1 cut(s) 498
BstMBI GATC 7 cut(s) 30, 50, 87, 230, 271, 643, 806
BstMCI CGRYCG 1 cut(s) 53
BstMWI GCNNNNNNNGC 6 cut(s) 10, 550, 839, 1019, 1163, 1475
BstNI CCWGG 1 cut(s) 1803
BstSCI CCNGG 6 cut(s) 145, 302, 1480, 1481, 1542, 1801
BstSFI CTRYAG 4 cut(s) 705, 729, 1596, 1856
BstUI CGCG 4 cut(s) 253, 361, 1013, 1385
BstV2I GAAGAC 1 cut(s) 1974
BstXI CCANNNNNNTGG 1 cut(s) 106
Bsu15I ATCGAT 1 cut(s) 669
Bsu36I CCTNAGG 1 cut(s) 945
BsuI GTATCC 1 cut(s) 162
BsuRI GGCC 6 cut(s) 63, 93, 241, 269, 476, 1903
BsuTUI ATCGAT 1 cut(s) 669
BtgI CCRYGG 1 cut(s) 354
BtgZI GCGATG 1 cut(s) 1952
BtsCI GGATG 6 cut(s) 115, 318, 1243, 1388, 1799, 1890
BtsI GCAGTG 5 cut(s) 229, 717, 855, 872, 1638
BtsIMutI CAGTG 8 cut(s) 229, 573, 643, 661, 717, 855, 872, 1638
BtuMI TCGCGA 1 cut(s) 1385
BveI ACCTGC 1 cut(s) 308
Cac8I GCNNGC 2 cut(s) 210, 969
CaiI CAGNNNCTG 1 cut(s) 13
CciI TCATGA 1 cut(s) 1957
CfoI GCGC 7 cut(s) 253, 361, 609, 776, 795, 1015, 1168
Cfr10I RCCGGY 1 cut(s) 1445
Cfr13I GGNCC 4 cut(s) 267, 1187, 1546, 1901
Cfr9I CCCGGG 1 cut(s) 1481
ClaI ATCGAT 1 cut(s) 669
Csp6I GTAC 2 cut(s) 1697, 2005
CspCI CAANNNNNGTGG 2 cut(s) 549, 584
CviAII CATG 5 cut(s) 1035, 1293, 1466, 1864, 1958
CviQI GTAC 2 cut(s) 1697, 2005
DpnI GATC 7 cut(s) 32, 52, 89, 232, 273, 645, 808
DpnII GATC 7 cut(s) 30, 50, 87, 230, 271, 643, 806
EaeI YGGCCR 4 cut(s) 61, 91, 239, 474
Eam1104I CTCTTC 8 cut(s) 438, 496, 568, 577, 669, 711, 1062, 1343
EarI CTCTTC 8 cut(s) 438, 496, 568, 577, 669, 711, 1062, 1343
EciI GGCGGA 2 cut(s) 216, 243
Ecl136II GAGCTC 3 cut(s) 57, 1008, 1213
Eco130I CCWWGG 1 cut(s) 64
Eco24I GRGCYC 3 cut(s) 59, 1010, 1215
Eco31I GGTCTC 1 cut(s) 498
Eco47I GGWCC 2 cut(s) 1187, 1546
Eco47III AGCGCT 1 cut(s) 608
Eco53kI GAGCTC 3 cut(s) 57, 1008, 1213
Eco57I CTGAAG 5 cut(s) 152, 361, 368, 1305, 1857
Eco81I CCTNAGG 1 cut(s) 945
Eco88I CYCGRG 1 cut(s) 1481
EcoICRI GAGCTC 3 cut(s) 57, 1008, 1213
EcoNI CCTNNNNNAGG 4 cut(s) 376, 1181, 1259, 1553
EcoO109I RGGNCCY 2 cut(s) 1187, 1546
EcoRI GAATTC 1 cut(s) 812
EcoRII CCWGG 1 cut(s) 1801
EcoT14I CCWWGG 1 cut(s) 64
EcoT38I GRGCYC 3 cut(s) 59, 1010, 1215
ErhI CCWWGG 1 cut(s) 64
FaeI CATG 5 cut(s) 1038, 1296, 1469, 1867, 1961
FaqI GGGAC 3 cut(s) 552, 637, 1200
FatI CATG 5 cut(s) 1034, 1292, 1465, 1863, 1957
FauI CCCGC 2 cut(s) 170, 529
FauNDI CATATG 1 cut(s) 1693
FblI GTMKAC 1 cut(s) 467
FokI GGATG 6 cut(s) 122, 325, 1250, 1375, 1806, 1897
FriOI GRGCYC 3 cut(s) 59, 1010, 1215
FspBI CTAG 7 cut(s) 197, 804, 860, 1343, 1700, 1994, 2035
GlaI GCGC 7 cut(s) 252, 360, 608, 775, 794, 1014, 1167
GsuI CTGGAG 2 cut(s) 870, 1784
HaeII RGCGCY 4 cut(s) 610, 777, 796, 1169
HaeIII GGCC 6 cut(s) 63, 93, 241, 269, 476, 1903
HapII CCGG 7 cut(s) 147, 290, 304, 1415, 1446, 1482, 1543
HhaI GCGC 7 cut(s) 253, 361, 609, 776, 795, 1015, 1168
Hin1I GRCGYC 1 cut(s) 193
Hin1II CATG 5 cut(s) 1038, 1296, 1469, 1867, 1961
Hin6I GCGC 7 cut(s) 251, 359, 607, 774, 793, 1013, 1166
HinP1I GCGC 7 cut(s) 251, 359, 607, 774, 793, 1013, 1166
HindIII AAGCTT 2 cut(s) 957, 1907
HinfI GANTC 8 cut(s) 36, 187, 448, 587, 1380, 1451, 1759, 1947
HpaII CCGG 7 cut(s) 147, 290, 304, 1415, 1446, 1482, 1543
HphI GGTGA 7 cut(s) 644, 781, 1070, 1460, 1531, 1751, 1907
Hpy166II GTNNAC 3 cut(s) 468, 1400, 1538
Hpy188I TCNGA 7 cut(s) 35, 132, 235, 280, 811, 1046, 1758
Hpy188III TCNNGA 9 cut(s) 26, 404, 650, 804, 887, 1130, 1384, 1763, 1958
Hpy8I GTNNAC 3 cut(s) 468, 1400, 1538
Hpy99I CGWCG 3 cut(s) 195, 249, 1055
HpyCH4III ACNGT 9 cut(s) 174, 568, 638, 656, 801, 1147, 1397, 1404, 1860
HpyCH4IV ACGT 2 cut(s) 193, 1050
HpyF10VI GCNNNNNNNGC 6 cut(s) 10, 550, 839, 1019, 1163, 1475
HpySE526I ACGT 2 cut(s) 193, 1050
Hsp92I GRCGYC 1 cut(s) 193
Hsp92II CATG 5 cut(s) 1038, 1296, 1469, 1867, 1961
HspAI GCGC 7 cut(s) 251, 359, 607, 774, 793, 1013, 1166
KflI GGGWCCC 1 cut(s) 1187
Kzo9I GATC 7 cut(s) 30, 50, 87, 230, 271, 643, 806
LguI GCTCTTC 2 cut(s) 669, 1062
LmnI GCTCC 4 cut(s) 76, 446, 1013, 1765
LweI GCATC 5 cut(s) 817, 1113, 1228, 1784, 1875
MaeI CTAG 7 cut(s) 197, 804, 860, 1343, 1700, 1994, 2035
MaeII ACGT 2 cut(s) 193, 1050
MaeIII GTNAC 3 cut(s) 632, 897, 1499
MalI GATC 7 cut(s) 32, 52, 89, 232, 273, 645, 808
MbiI CCGCTC 2 cut(s) 238, 833
MboI GATC 7 cut(s) 30, 50, 87, 230, 271, 643, 806
MboII GAAGA 9 cut(s) 425, 513, 585, 594, 686, 728, 1079, 1360, 1979
MhlI GDGCHC 4 cut(s) 59, 1010, 1215, 1770
MlsI TGGCCA 1 cut(s) 63
MluCI AATT 6 cut(s) 397, 561, 812, 1242, 1610, 1977
MluNI TGGCCA 1 cut(s) 63
MlyI GAGTC 1 cut(s) 442
MmeI TCCRAC 2 cut(s) 303, 1416
Mox20I TGGCCA 1 cut(s) 63
MscI TGGCCA 1 cut(s) 63
MseI TTAA 3 cut(s) 258, 837, 1613
MslI CAYNNNNRTG 1 cut(s) 1962
Msp20I TGGCCA 1 cut(s) 63
MspA1I CMGCKG 3 cut(s) 544, 734, 1157
MspI CCGG 7 cut(s) 147, 290, 304, 1415, 1446, 1482, 1543
MspR9I CCNGG 6 cut(s) 147, 304, 1482, 1483, 1544, 1803
Mva1269I GAATGC 1 cut(s) 562
MvaI CCWGG 1 cut(s) 1803
MvnI CGCG 4 cut(s) 253, 361, 1013, 1385
MwoI GCNNNNNNNGC 6 cut(s) 10, 550, 839, 1019, 1163, 1475
NciI CCSGG 5 cut(s) 147, 304, 1482, 1483, 1544
NdeI CATATG 1 cut(s) 1693
NdeII GATC 7 cut(s) 30, 50, 87, 230, 271, 643, 806
NlaIII CATG 5 cut(s) 1038, 1296, 1469, 1867, 1961
NmuCI GTSAC 1 cut(s) 632
NruI TCGCGA 1 cut(s) 1385
NspV TTCGAA 1 cut(s) 1678
PagI TCATGA 1 cut(s) 1957
PciSI GCTCTTC 2 cut(s) 669, 1062
PctI GAATGC 1 cut(s) 562
PfeI GAWTC 7 cut(s) 36, 187, 587, 1380, 1451, 1759, 1947
Ple19I CGATCG 1 cut(s) 53
PleI GAGTC 1 cut(s) 442
PpsI GAGTC 1 cut(s) 442
PpuMI RGGWCCY 2 cut(s) 1187, 1546
PshBI ATTAAT 1 cut(s) 1613
Psp124BI GAGCTC 3 cut(s) 59, 1010, 1215
Psp5II RGGWCCY 2 cut(s) 1187, 1546
Psp6I CCWGG 1 cut(s) 1801
PspGI CCWGG 1 cut(s) 1801
PspPI GGNCC 4 cut(s) 267, 1187, 1546, 1901
PspPPI RGGWCCY 2 cut(s) 1187, 1546
PstI CTGCAG 2 cut(s) 709, 733
PstNI CAGNNNCTG 1 cut(s) 13
PvuI CGATCG 1 cut(s) 53
PvuII CAGCTG 2 cut(s) 734, 1157
RruI TCGCGA 1 cut(s) 1385
RsaI GTAC 2 cut(s) 1698, 2006
RsaNI GTAC 2 cut(s) 1697, 2005
RseI CAYNNNNRTG 1 cut(s) 1962
SacI GAGCTC 3 cut(s) 59, 1010, 1215
SapI GCTCTTC 2 cut(s) 669, 1062
SaqAI TTAA 3 cut(s) 258, 837, 1613
Sau3AI GATC 7 cut(s) 30, 50, 87, 230, 271, 643, 806
Sau96I GGNCC 4 cut(s) 267, 1187, 1546, 1901
ScaI AGTACT 1 cut(s) 2006
SchI GAGTC 1 cut(s) 442
ScrFI CCNGG 6 cut(s) 147, 304, 1482, 1483, 1544, 1803
SduI GDGCHC 4 cut(s) 59, 1010, 1215, 1770
SfaNI GCATC 5 cut(s) 817, 1113, 1228, 1784, 1875
SfcI CTRYAG 4 cut(s) 705, 729, 1596, 1856
SfuI TTCGAA 1 cut(s) 1678
SinI GGWCC 2 cut(s) 1187, 1546
SmaI CCCGGG 1 cut(s) 1483
SmiMI CAYNNNNRTG 1 cut(s) 1962
SmlI CTYRAG 2 cut(s) 902, 1621
SmoI CTYRAG 2 cut(s) 902, 1621
SpeI ACTAGT 1 cut(s) 859
Sse9I AATT 6 cut(s) 397, 561, 812, 1242, 1610, 1977
SspI AATATT 1 cut(s) 1327
SspMI CTAG 7 cut(s) 197, 804, 860, 1343, 1700, 1994, 2035
SstI GAGCTC 3 cut(s) 59, 1010, 1215
StyD4I CCNGG 6 cut(s) 145, 302, 1480, 1481, 1542, 1801
StyI CCWWGG 1 cut(s) 64
TaaI ACNGT 9 cut(s) 174, 568, 638, 656, 801, 1147, 1397, 1404, 1860
TaiI ACGT 2 cut(s) 196, 1053
TaqI TCGA 5 cut(s) 53, 185, 190, 669, 1678
TasI AATT 6 cut(s) 397, 561, 812, 1242, 1610, 1977
TatI WGTACW 2 cut(s) 1696, 2004
TauI GCSGC 5 cut(s) 241, 256, 364, 553, 833
TfiI GAWTC 7 cut(s) 36, 187, 587, 1380, 1451, 1759, 1947
Tru1I TTAA 3 cut(s) 258, 837, 1613
Tru9I TTAA 3 cut(s) 258, 837, 1613
TscAI CASTG 8 cut(s) 229, 573, 643, 661, 717, 855, 872, 1638
TseFI GTSAC 1 cut(s) 632
Tsp45I GTSAC 1 cut(s) 632
TspDTI ATGAA 8 cut(s) 126, 687, 1503, 1798, 1852, 1946, 1974, 1980
TspMI CCCGGG 1 cut(s) 1481
TspRI CASTG 8 cut(s) 229, 573, 643, 661, 717, 855, 872, 1638
VpaK11BI GGWCC 2 cut(s) 1187, 1546
VspI ATTAAT 1 cut(s) 1613
XagI CCTNNNNNAGG 4 cut(s) 376, 1181, 1259, 1553
XapI RAATTY 1 cut(s) 812
XbaI TCTAGA 1 cut(s) 803
XmaI CCCGGG 1 cut(s) 1481
XmiI GTMKAC 1 cut(s) 467
XspI CTAG 7 cut(s) 197, 804, 860, 1343, 1700, 1994, 2035
ZraI GACGTC 1 cut(s) 194
ZrmI AGTACT 1 cut(s) 2006
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.