Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0001387

Physical Location & Seq

Genomic Coordinates Forward (+)

26319726 .. 26322630

Gene Structure 2905 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0149800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1077 bp

ATGCTTTGTGATCAGATCCCTCCTCTATCTTGCTGTACCCACCAAACCCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGTCTCTCAGAAATCAAGTCAAGTCATGGCTAACGACAAGGGTCTGATCGTGAGTTTCGGGGAGATGCTGATCGACTTCGTGCCCACCGCTTCGGGCGTTTCCCTGGCCGAAGCCCCGGGGTTCTTGAAAGCCCCCGGTGGCGCCCCCGCCAACGTCGCCATCGCCGTGGCTCGGCTCGGCGGCCACGCCTCCTTCGTCGGCAAACTCGGCGACGACGAGTTCGGCCACATGCTCGCCGGAATCTTGAAGGAGAACGGCGTGACCGGAGACGGCATCCTGTTCGACCAGGGCGCGCGCACCGCTCTGGCCTTCGTGACCCTACGCGCCGACGGAGAGCGTGAGTTCATGTTCTACCGGAACCCTAGCGCCGATATGCTGCTCAAGCCCGAAGAGCTCAATTTCGAGCTCATCAGATCGGCCAAAGTGTTCCACTATGGATCAATAAGCTTGATCGTGGAGCCATGCAGGTCGGCACATCTAAAGGCAATGGAGGTTGCCAAAGATGCCGGTGCCTTGCTTTCTTATGACCCGAACCTCCGGCTACCACTGTGGCCCTCACCTAAGGAGGCACGCGAGCAGATATTGAGTATATGGGAAAAGGCAGAAGTGATCAAGGTCAGTGATGTGGAGCTCGAGTTCCTCACAGGAAATGACAGTATTGATGATGAAAATGCACTGACTCTATGGCACTCTAACTTGAAGCTCCTCCTTGTCACTCTTGGTGAGAAGGGTTGCAAATACTACACTAAGAATTTCCGTGGATCTGTGGAAGCTTTCCATGTAACTGCGGTAGATACTACTGGTGCTGGTGATGCATTTGTGGGTGCTCTTCTCACAAAGATTGTTGATGACCAATCCATTCTTGAGGATGAGCCAAGATTGAGGGAAGTACTCAAATTTGCAAATGCATGTGGAGCAATTACAACTACTAAGAAGGGAGCAATTCCTGCACTCCCCACTGAGTCTGATGCCCTCGCCCTAATCAAAGGGGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009739 GO:0009740 GO:0009755 GO:0009889 GO:0009987 GO:0010029 GO:0010033 GO:0010099 GO:0010468 GO:0010476 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044444 GO:0044464 GO:0048518 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0080090 GO:0097159 GO:0097305 GO:0097306 GO:0140110 GO:1900140 GO:1901363 GO:1901700 GO:1901701 GO:1903506 GO:2000026 GO:2000030 GO:2000112 GO:2000306 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04612 ko05152 map04612 map05152

Pfam Domains

Protein Families

CBFD_NFYB_HMF

Protein Analysis

358

Amino Acids

38.38

Weight (kDa)

5.12

Isoelectric Point (pI)

25.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PfkB	PF00294	42 - 347	6.4e-72	pfkB family carbohydrate kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001387)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08970 AT1G08970 AT1G08970 AT1G08970 AT1G54830 AT1G54830 AT1G54830
fragaria_vesca	FvH4_4g14750 FvH4_6g05540 FvH4_6g05540
malus_domestica	MD04G1207500.v1.1 MD12G1221800.v1.1 MD13G1185200.v1.1 MD16G1185900.v1.1
prunus_persica	Prupe.1G152500_v2.0.a1 Prupe.1G152500_v2.0.a1 Prupe.1G152500_v2.0.a1 Prupe.1G152500_v2.0.a1 Prupe.1G152500_v2.0.a1 Prupe.1G152500_v2.0.a1 Prupe.6G328500_v2.0.a1 Prupe.6G328500_v2.0.a1 Prupe.6G328500_v2.0.a1
pyrus_communis	pycom04g18370 pycom12g20790 pycom13g15980 pycom16g15560
rosa_chinensis	RchiOBHm_Chr3g0454311 RchiOBHm_Chr4g0417851
rosa_laevigata	RLG00000007894 RLG00000025463
rosa_multiflora	Rmu_sc0001340.1_g000002 Rmu_sc0004911.1_g000014 Rmu_sc0005844.1_g000004 Rmu_sc0007543.1_g000006
rosa_roxburghii	Rroxscaffold_165G00437130 Rroxscaffold_5G00361270 Rroxscaffold_6G00425220
rosa_rugosa	Rorug02G0654100 Rorug04G0149700.1 Rorug04G0149800
rosa_samantha	Rh3AG058100 Rh3BG059800 Rh3CG059000 Rh3CG291100 Rh3DG060300 Rh4AG212100 Rh4BG218900 Rh4CG223100 Rh4DG209900
rosa_wichuraiana	Rw3G004450 Rw3G023190 Rw4G017990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	537
AccB1I	GGYRCC	2 cut(s)	221, 590
AccBSI	CCGCTC	1 cut(s)	383
AccII	CGCG	4 cut(s)	374, 376, 405, 654
AciI	CCGC	5 cut(s)	168, 228, 261, 381, 869
AclWI	GGATC	3 cut(s)	10, 526, 850
AcoI	YGGCCR	4 cut(s)	186, 262, 304, 498
AcsI	RAATTY	2 cut(s)	832, 977
AcyI	GRCGYC	1 cut(s)	222
AfaI	GTAC	2 cut(s)	37, 972
AfiI	CCNNNNNNNGG	1 cut(s)	252
AgsI	TTSAA	3 cut(s)	208, 328, 781
AjnI	CCWGG	2 cut(s)	183, 366
AloI	GAACNNNNNNTCC	2 cut(s)	701, 733
AluBI	AGCT	6 cut(s)	475, 487, 528, 712, 784, 854
AluI	AGCT	6 cut(s)	475, 487, 528, 712, 784, 854
Alw21I	GWGCWC	4 cut(s)	477, 489, 714, 910
Alw26I	GTCTC	2 cut(s)	88, 342
AlwI	GGATC	3 cut(s)	10, 526, 850
Ama87I	CYCGRG	2 cut(s)	196, 713
AoxI	GGCC	6 cut(s)	186, 262, 304, 387, 498, 632
ApeKI	GCWGC	1 cut(s)	457
ApoI	RAATTY	2 cut(s)	832, 977
ArsI	GACNNNNNNTTYG	2 cut(s)	284, 316
AspLEI	GCGC	6 cut(s)	224, 374, 376, 378, 407, 449
AspS9I	GGNCC	1 cut(s)	633
AsuC2I	CCSGG	3 cut(s)	197, 198, 216
AsuHPI	GGTGA	3 cut(s)	630, 815, 902
AvaI	CYCGRG	2 cut(s)	196, 713
AxyI	CCTNAGG	1 cut(s)	642
BaeGI	GKGCMC	1 cut(s)	165
BanI	GGYRCC	2 cut(s)	221, 590
BanII	GRGCYC	3 cut(s)	477, 489, 714
Bbv12I	GWGCWC	4 cut(s)	477, 489, 714, 910
BbvI	GCAGC	1 cut(s)	444
BccI	CCATC	1 cut(s)	248
BceAI	ACGGC	3 cut(s)	230, 352, 367
BcgI	CGANNNNNNTGC	2 cut(s)	343, 377
BciT130I	CCWGG	2 cut(s)	185, 368
BclI	TGATCA	2 cut(s)	10, 690
BcnI	CCSGG	3 cut(s)	197, 198, 216
BcoDI	GTCTC	2 cut(s)	88, 342
BfaI	CTAG	1 cut(s)	444
BfoI	RGCGCY	2 cut(s)	225, 450
BfuAI	ACCTGC	1 cut(s)	537
BisI	GCNGC	2 cut(s)	262, 458
BlsI	GCNGC	2 cut(s)	263, 459
BmcAI	AGTACT	1 cut(s)	972
Bme1390I	CCNGG	5 cut(s)	185, 197, 198, 216, 368
BmeT110I	CYCGRG	2 cut(s)	196, 713
BmgT120I	GGNCC	1 cut(s)	633
BmiI	GGNNCC	4 cut(s)	223, 440, 540, 592
BmrFI	CCNGG	5 cut(s)	185, 197, 198, 216, 368
BmsI	GCATC	5 cut(s)	135, 363, 574, 883, 1039
BoxI	GACNNNNGTC	1 cut(s)	120
BpuEI	CTTGAG	2 cut(s)	446, 965
BpuMI	CCSGG	3 cut(s)	197, 198, 216
BsaBI	GATNNNNATC	1 cut(s)	149
BsaHI	GRCGYC	1 cut(s)	222
BsaI	GGTCTC	1 cut(s)	88
BsaJI	CCNNGG	8 cut(s)	183, 195, 196, 197, 214, 246, 367, 838
BsaWI	WCCGGW	2 cut(s)	344, 435
BsaXI	ACNNNNNCTCC	2 cut(s)	701, 731
Bsc4I	CCNNNNNNNGG	1 cut(s)	252
Bse118I	RCCGGY	1 cut(s)	587
Bse1I	ACTGG	1 cut(s)	886
Bse21I	CCTNAGG	1 cut(s)	642
Bse3DI	GCAATG	1 cut(s)	573
Bse8I	GATNNNNATC	1 cut(s)	149
BseBI	CCWGG	2 cut(s)	185, 368
BseDI	CCNNGG	8 cut(s)	183, 195, 196, 197, 214, 246, 367, 838
BseGI	GGATG	2 cut(s)	354, 955
BseJI	GATNNNNATC	1 cut(s)	149
BseLI	CCNNNNNNNGG	1 cut(s)	252
BseMI	GCAATG	1 cut(s)	573
BseMII	CTCAG	2 cut(s)	101, 1032
BseNI	ACTGG	1 cut(s)	886
BsePI	GCGCGC	2 cut(s)	372, 374
BseRI	GAGGAG	3 cut(s)	12, 41, 776
BseSI	GKGCMC	1 cut(s)	165
BseXI	GCAGC	1 cut(s)	444
BsgI	GTGCAG	1 cut(s)	1014
Bsh1236I	CGCG	4 cut(s)	374, 376, 405, 654
BshFI	GGCC	6 cut(s)	188, 264, 306, 389, 500, 634
BshNI	GGYRCC	2 cut(s)	221, 590
BsiHKAI	GWGCWC	4 cut(s)	477, 489, 714, 910
BsiHKCI	CYCGRG	2 cut(s)	196, 713
BsiSI	CCGG	7 cut(s)	197, 216, 318, 345, 436, 588, 619
BslI	CCNNNNNNNGG	1 cut(s)	252
BsmAI	GTCTC	2 cut(s)	88, 342
BsmBI	CGTCTC	1 cut(s)	342
BsnI	GGCC	6 cut(s)	188, 264, 306, 389, 500, 634
Bso31I	GGTCTC	1 cut(s)	88
BsoBI	CYCGRG	2 cut(s)	196, 713
Bsp1286I	GDGCHC	5 cut(s)	165, 477, 489, 714, 910
Bsp143I	GATC	9 cut(s)	10, 15, 126, 150, 494, 518, 531, 690, 842
BspACI	CCGC	5 cut(s)	168, 228, 261, 381, 869
BspANI	GGCC	6 cut(s)	188, 264, 306, 389, 500, 634
BspCNI	CTCAG	2 cut(s)	100, 1033
BspFNI	CGCG	4 cut(s)	374, 376, 405, 654
BspLI	GGNNCC	4 cut(s)	223, 440, 540, 592
BspMI	ACCTGC	1 cut(s)	537
BspPI	GGATC	3 cut(s)	10, 526, 850
BspQI	GCTCTTC	2 cut(s)	465, 915
BspT107I	GGYRCC	2 cut(s)	221, 590
BspTNI	GGTCTC	1 cut(s)	88
BsrBI	CCGCTC	1 cut(s)	383
BsrDI	GCAATG	1 cut(s)	573
BsrFI	RCCGGY	1 cut(s)	587
BsrI	ACTGG	1 cut(s)	886
BssAI	RCCGGY	1 cut(s)	587
BssECI	CCNNGG	8 cut(s)	183, 195, 196, 197, 214, 246, 367, 838
BssHII	GCGCGC	2 cut(s)	372, 374
BssMI	GATC	9 cut(s)	10, 15, 126, 150, 494, 518, 531, 690, 842
BssNI	GRCGYC	1 cut(s)	222
Bst2UI	CCWGG	2 cut(s)	185, 368
Bst4CI	ACNGT	2 cut(s)	630, 737
Bst6I	CTCTTC	2 cut(s)	465, 915
BstACI	GRCGYC	1 cut(s)	222
BstAPI	GCANNNNNTGC	1 cut(s)	1028
BstC8I	GCNNGC	5 cut(s)	315, 374, 376, 652, 656
BstDEI	CTNAG	5 cut(s)	87, 642, 828, 1011, 1041
BstDSI	CCRYGG	2 cut(s)	246, 838
BstF5I	GGATG	2 cut(s)	354, 955
BstFNI	CGCG	4 cut(s)	374, 376, 405, 654
BstH2I	RGCGCY	2 cut(s)	225, 450
BstHHI	GCGC	6 cut(s)	224, 374, 376, 378, 407, 449
BstKTI	GATC	9 cut(s)	13, 18, 129, 153, 497, 521, 534, 693, 845
BstMAI	GTCTC	2 cut(s)	88, 342
BstMBI	GATC	9 cut(s)	10, 15, 126, 150, 494, 518, 531, 690, 842
BstMWI	GCNNNNNNNGC	9 cut(s)	236, 288, 380, 463, 472, 584, 893, 995, 1028
BstNI	CCWGG	2 cut(s)	185, 368
BstNSI	RCATGY	2 cut(s)	313, 993
BstPAI	GACNNNNGTC	1 cut(s)	120
BstSCI	CCNGG	5 cut(s)	183, 195, 196, 214, 366
BstSLI	GKGCMC	1 cut(s)	165
BstUI	CGCG	4 cut(s)	374, 376, 405, 654
BstV1I	GCAGC	1 cut(s)	444
BstX2I	RGATCY	2 cut(s)	15, 842
BstXI	CCANNNNNNTGG	1 cut(s)	247
BstYI	RGATCY	2 cut(s)	15, 842
Bsu36I	CCTNAGG	1 cut(s)	642
BsuRI	GGCC	6 cut(s)	188, 264, 306, 389, 500, 634
BtgI	CCRYGG	2 cut(s)	246, 838
BtgZI	GCGATG	1 cut(s)	226
BtsCI	GGATG	2 cut(s)	354, 955
BtsIMutI	CAGTG	4 cut(s)	626, 706, 755, 1038
BveI	ACCTGC	1 cut(s)	537
Cac8I	GCNNGC	5 cut(s)	315, 374, 376, 652, 656
CfoI	GCGC	6 cut(s)	224, 374, 376, 378, 407, 449
Cfr10I	RCCGGY	1 cut(s)	587
Cfr13I	GGNCC	1 cut(s)	633
Cfr9I	CCCGGG	1 cut(s)	196
Csp6I	GTAC	2 cut(s)	36, 971
CviAII	CATG	6 cut(s)	106, 310, 427, 543, 860, 990
CviQI	GTAC	2 cut(s)	36, 971
DdeI	CTNAG	5 cut(s)	87, 642, 828, 1011, 1041
DinI	GGCGCC	1 cut(s)	223
DpnI	GATC	9 cut(s)	12, 17, 128, 152, 496, 520, 533, 692, 844
DpnII	GATC	9 cut(s)	10, 15, 126, 150, 494, 518, 531, 690, 842
EaeI	YGGCCR	4 cut(s)	186, 262, 304, 498
Eam1104I	CTCTTC	2 cut(s)	465, 915
EarI	CTCTTC	2 cut(s)	465, 915
Ecl136II	GAGCTC	3 cut(s)	475, 487, 712
Eco24I	GRGCYC	3 cut(s)	477, 489, 714
Eco31I	GGTCTC	1 cut(s)	88
Eco53kI	GAGCTC	3 cut(s)	475, 487, 712
Eco81I	CCTNAGG	1 cut(s)	642
Eco88I	CYCGRG	2 cut(s)	196, 713
EcoICRI	GAGCTC	3 cut(s)	475, 487, 712
EcoRII	CCWGG	2 cut(s)	183, 366
EcoT22I	ATGCAT	2 cut(s)	898, 991
EcoT38I	GRGCYC	3 cut(s)	477, 489, 714
EgeI	GGCGCC	1 cut(s)	223
EheI	GGCGCC	1 cut(s)	223
Esp3I	CGTCTC	1 cut(s)	342
FaeI	CATG	6 cut(s)	109, 313, 430, 546, 863, 993
FatI	CATG	6 cut(s)	105, 309, 426, 542, 859, 989
FauI	CCCGC	1 cut(s)	235
FbaI	TGATCA	2 cut(s)	10, 690
Fnu4HI	GCNGC	2 cut(s)	262, 458
FokI	GGATG	2 cut(s)	341, 962
FriOI	GRGCYC	3 cut(s)	477, 489, 714
Fsp4HI	GCNGC	2 cut(s)	262, 458
FspBI	CTAG	1 cut(s)	444
GlaI	GCGC	6 cut(s)	223, 373, 375, 377, 406, 448
GluI	GCNGC	2 cut(s)	262, 458
HaeII	RGCGCY	2 cut(s)	225, 450
HaeIII	GGCC	6 cut(s)	188, 264, 306, 389, 500, 634
HapII	CCGG	7 cut(s)	197, 216, 318, 345, 436, 588, 619
HhaI	GCGC	6 cut(s)	224, 374, 376, 378, 407, 449
Hin1I	GRCGYC	1 cut(s)	222
Hin1II	CATG	6 cut(s)	109, 313, 430, 546, 863, 993
Hin6I	GCGC	6 cut(s)	222, 372, 374, 376, 405, 447
HinP1I	GCGC	6 cut(s)	222, 372, 374, 376, 405, 447
HindIII	AAGCTT	2 cut(s)	526, 852
HinfI	GANTC	3 cut(s)	321, 760, 1043
HpaII	CCGG	7 cut(s)	197, 216, 318, 345, 436, 588, 619
HphI	GGTGA	3 cut(s)	630, 815, 902
Hpy188I	TCNGA	5 cut(s)	15, 90, 126, 494, 1048
Hpy188III	TCNNGA	5 cut(s)	130, 205, 325, 394, 944
Hpy99I	CGWCG	5 cut(s)	239, 281, 296, 299, 413
HpyAV	CCTTC	5 cut(s)	283, 322, 400, 802, 1009
HpyCH4III	ACNGT	2 cut(s)	630, 737
HpyCH4IV	ACGT	1 cut(s)	234
HpyCH4V	TGCA	7 cut(s)	546, 755, 816, 896, 983, 989, 1031
HpyF10VI	GCNNNNNNNGC	9 cut(s)	236, 288, 380, 463, 472, 584, 893, 995, 1028
HpyF3I	CTNAG	5 cut(s)	87, 642, 828, 1011, 1041
HpySE526I	ACGT	1 cut(s)	234
Hsp92I	GRCGYC	1 cut(s)	222
Hsp92II	CATG	6 cut(s)	109, 313, 430, 546, 863, 993
HspAI	GCGC	6 cut(s)	222, 372, 374, 376, 405, 447
KasI	GGCGCC	1 cut(s)	221
Ksp22I	TGATCA	2 cut(s)	10, 690
Kzo9I	GATC	9 cut(s)	10, 15, 126, 150, 494, 518, 531, 690, 842
LguI	GCTCTTC	2 cut(s)	465, 915
LmnI	GCTCC	5 cut(s)	538, 709, 789, 995, 1019
Lsp1109I	GCAGC	1 cut(s)	444
LweI	GCATC	5 cut(s)	135, 363, 574, 883, 1039
MaeI	CTAG	1 cut(s)	444
MaeII	ACGT	1 cut(s)	234
MaeIII	GTNAC	4 cut(s)	340, 394, 793, 862
MalI	GATC	9 cut(s)	12, 17, 128, 152, 496, 520, 533, 692, 844
MbiI	CCGCTC	1 cut(s)	383
MboI	GATC	9 cut(s)	10, 15, 126, 150, 494, 518, 531, 690, 842
MboII	GAAGA	2 cut(s)	482, 902
MflI	RGATCY	2 cut(s)	15, 842
MhlI	GDGCHC	5 cut(s)	165, 477, 489, 714, 910
MluCI	AATT	5 cut(s)	478, 832, 977, 999, 1023
Mly113I	GGCGCC	1 cut(s)	222
MlyI	GAGTC	2 cut(s)	754, 1052
Mph1103I	ATGCAT	2 cut(s)	898, 991
MslI	CAYNNNNRTG	1 cut(s)	245
MspI	CCGG	7 cut(s)	197, 216, 318, 345, 436, 588, 619
MspR9I	CCNGG	5 cut(s)	185, 197, 198, 216, 368
MvaI	CCWGG	2 cut(s)	185, 368
MvnI	CGCG	4 cut(s)	374, 376, 405, 654
MwoI	GCNNNNNNNGC	9 cut(s)	236, 288, 380, 463, 472, 584, 893, 995, 1028
NarI	GGCGCC	1 cut(s)	222
NciI	CCSGG	3 cut(s)	197, 198, 216
NdeII	GATC	9 cut(s)	10, 15, 126, 150, 494, 518, 531, 690, 842
NlaIII	CATG	6 cut(s)	109, 313, 430, 546, 863, 993
NlaIV	GGNNCC	4 cut(s)	223, 440, 540, 592
NmeAIII	GCCGAG	3 cut(s)	232, 237, 267
NmuCI	GTSAC	3 cut(s)	340, 394, 793
NsiI	ATGCAT	2 cut(s)	898, 991
NspI	RCATGY	2 cut(s)	313, 993
PaeR7I	CTCGAG	1 cut(s)	713
PauI	GCGCGC	2 cut(s)	372, 374
PciSI	GCTCTTC	2 cut(s)	465, 915
PcsI	WCGNNNNNNNCGW	3 cut(s)	243, 273, 294
PfeI	GAWTC	1 cut(s)	321
PkrI	GCNGC	2 cut(s)	263, 459
PleI	GAGTC	2 cut(s)	754, 1051
PluTI	GGCGCC	1 cut(s)	225
PpsI	GAGTC	2 cut(s)	754, 1051
PshAI	GACNNNNGTC	1 cut(s)	120
Psp124BI	GAGCTC	3 cut(s)	477, 489, 714
Psp6I	CCWGG	2 cut(s)	183, 366
PspGI	CCWGG	2 cut(s)	183, 366
PspN4I	GGNNCC	4 cut(s)	223, 440, 540, 592
PspPI	GGNCC	1 cut(s)	633
PspXI	VCTCGAGB	1 cut(s)	713
PsuI	RGATCY	2 cut(s)	15, 842
PteI	GCGCGC	2 cut(s)	372, 374
RsaI	GTAC	2 cut(s)	37, 972
RsaNI	GTAC	2 cut(s)	36, 971
RseI	CAYNNNNRTG	1 cut(s)	245
SacI	GAGCTC	3 cut(s)	477, 489, 714
SapI	GCTCTTC	2 cut(s)	465, 915
SatI	GCNGC	2 cut(s)	262, 458
Sau3AI	GATC	9 cut(s)	10, 15, 126, 150, 494, 518, 531, 690, 842
Sau96I	GGNCC	1 cut(s)	633
ScaI	AGTACT	1 cut(s)	972
SchI	GAGTC	2 cut(s)	754, 1052
ScrFI	CCNGG	5 cut(s)	185, 197, 198, 216, 368
SduI	GDGCHC	5 cut(s)	165, 477, 489, 714, 910
SfaNI	GCATC	5 cut(s)	135, 363, 574, 883, 1039
SfoI	GGCGCC	1 cut(s)	223
Sfr274I	CTCGAG	1 cut(s)	713
SlaI	CTCGAG	1 cut(s)	713
SmaI	CCCGGG	1 cut(s)	198
SmiMI	CAYNNNNRTG	1 cut(s)	245
SmlI	CTYRAG	3 cut(s)	461, 713, 944
SmoI	CTYRAG	3 cut(s)	461, 713, 944
Sse9I	AATT	5 cut(s)	478, 832, 977, 999, 1023
SsiI	CCGC	5 cut(s)	168, 228, 261, 381, 869
SspDI	GGCGCC	1 cut(s)	221
SspMI	CTAG	1 cut(s)	444
SstI	GAGCTC	3 cut(s)	477, 489, 714
StyD4I	CCNGG	5 cut(s)	183, 195, 196, 214, 366
TaaI	ACNGT	2 cut(s)	630, 737
TaiI	ACGT	1 cut(s)	237
TaqI	TCGA	4 cut(s)	153, 363, 483, 714
TaqII	GACCGA	1 cut(s)	70
TasI	AATT	5 cut(s)	478, 832, 977, 999, 1023
TatI	WGTACW	1 cut(s)	970
TauI	GCSGC	1 cut(s)	264
TfiI	GAWTC	1 cut(s)	321
TscAI	CASTG	4 cut(s)	633, 706, 762, 1045
TseFI	GTSAC	3 cut(s)	340, 394, 793
TseI	GCWGC	1 cut(s)	457
Tsp45I	GTSAC	3 cut(s)	340, 394, 793
TspDTI	ATGAA	2 cut(s)	415, 762
TspGWI	ACGGA	2 cut(s)	426, 827
TspMI	CCCGGG	1 cut(s)	196
TspRI	CASTG	4 cut(s)	633, 706, 762, 1045
XapI	RAATTY	2 cut(s)	832, 977
XceI	RCATGY	2 cut(s)	313, 993
XhoI	CTCGAG	1 cut(s)	713
XmaI	CCCGGG	1 cut(s)	196
XspI	CTAG	1 cut(s)	444
ZrmI	AGTACT	1 cut(s)	972
Zsp2I	ATGCAT	2 cut(s)	898, 991

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.