Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0004375

Physical Location & Seq

Genomic Coordinates Forward (+)

54819231 .. 54820867

Gene Structure 1637 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0377500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGTCGATCTCCGGCGACCAAACCCACCGCCACCCTCACATCCTAGTCTACCCTTACCCTGCACAAGGCCACATGCTACCACTCCTCGACCTAACCAACCAACTAGCCCTCCGCGCCCTCACCATAACAATCGTCATCACCCCCAAAAACCTCCCAACCCTCACACCACTCCTCTCCGCCCACCCCTCAATCCAAACCCTCGTCCTCCCATTTCCTTCACACCCCAAAATACCCCCCGGCGTCGAAAACGTCAAGGACATCGGCACCCACGGCAACCTCGCCGTCATCAACGCCCTCGCCAACCTCCACGACCCGATCATCCAGTGGTTCGAGTCCCACCCTAACCCCCCTGTTGCTCTCATGTCAGACTTCTTTCTCGGCTACACTCTCCGCCTCGCTGACCACCTCAAAATCCCGAGAATAACCTTCTTCTCGTCCGGAGCTTTCTTGGCTTCGATTCAAGAGTACTGTTGGCGGAACCTAGACCTGGTCCAGTCGTCGTCGGTTATTGACTTCCCCTCTGTTCCTCGGTCGCCCTCGTTGAAAAAGGAGCACGTGCCGTCGATTGTGTTGGCTCACAGAGGAACGGATCCCGAGTCTGAGCTCCTGAGGGTTTCCATGCTTGCCAATACCGACAGTTGGGGCTGTGTTTTCAATACCTTTCAGGACTTGGAGGGTGAGTATTTGGATCACTTGAAGAGAAGAATGGGCCACAACCGGGTTTACAGTGTCGGCCCATTGAGTCTGATTGGTGCCGGAGATGGTGGTTTGGATCGGGGAAACCTGAACACGGGTTCCGGTGGCGATTTAATGGCGTGGCTTGACGGGTGTCCTGATGGGTCTGTGCTGTACGTTTGTTTTGGGAGTCAAAAATTGTTGAATAGTAAACAAATGGAGGCGTTGGCTAGTGGGCTCGAGCGGAGCGGGGTGAGATTTGTGTGGGCTGTGAAGACGGGCTCGGCCCAAGAAGCAAAGGACGGGTACGGTGTTGTGCCCGAGGGGTTTGAGGAGCGGGTTGCCGGGCGGGGCTGGCTGGTGAAAGGTTGGGCGCCGCAGGTGTTGATATTGGGTCACCGGGCCGTGGGCGGATTCGTGAGCCATTGCGGGTGGAATTCAGTGCTCGAAGCGATAGTGGGTGGGGTTTTGATATTGGGCTGGCCCATGGAGGCGGACCAGTATGTGAATGTCAAGCTGTTGGTGGAGGACATGGGTGTGGCCATACAAGTGTGCGAGGGTGCGAGCGGTGTACCCGACCCGGCCCAATTAGGAAAGGTGATTGCCGAGTCACTAAGCGGCGACTCGGCTGAAAAGGTAAGGGCAAAGGAGCTGAGGGACAAGGCATTTGTCGCTGTGAGAGATGGTGGTAGCTCTTCAAAAGATTTGGATGAGCTTGTGAAACAGTTGAGCCAACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0005742 GO:0005743 GO:0005773 GO:0005774 GO:0006605 GO:0006626 GO:0006810 GO:0006839 GO:0006886 GO:0006996 GO:0007005 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015399 GO:0015405 GO:0015450 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0019866 GO:0019867 GO:0022804 GO:0022857 GO:0022884 GO:0030150 GO:0031090 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044437 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0044743 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070585 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072655 GO:0098588 GO:0098796 GO:0098798 GO:0098799 GO:0098805 GO:1904680 GO:1990542

KEGG Pathways

Metabolic & Signaling

ko05014 map05014

Pfam Domains

Protein Families

Porin_3

Protein Analysis

471

Amino Acids

50.99

Weight (kDa)

5.97

Isoelectric Point (pI)

33.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	281 - 408	9.2e-16	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004375)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50400 AT3G20000 AT3G20000
fragaria_vesca	FvH4_4g11890
malus_domestica	MD04G1030900.v1.1 MD13G1002300.v1.1 MD13G1277300.v1.1
prunus_persica	Prupe.1G180200_v2.0.a1 Prupe.1G350100_v2.0.a1
pyrus_communis	pycom04g02610 pycom13g29500
rosa_chinensis	RchiOBHm_Chr4g0409321 RchiOBHm_Chr4g0447041
rosa_laevigata	RLG00000005610 RLG00000008570
rosa_multiflora	Rmu_sc0014071.1_g000007 Rmu_sc0019356.1_g000004
rosa_roxburghii	Rroxscaffold_5G00353830 Rroxscaffold_5G00387360
rosa_rugosa	Rorug04G0092300 Rorug04G0377400 Rorug04G0377500 Rorug04G0377600
rosa_samantha	Rh4AG155400 Rh4AG438700 Rh4BG153700 Rh4BG447800 Rh4CG164300 Rh4CG464900 Rh4DG148300
rosa_wichuraiana	Rw4G012690 Rw4G037530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1045
Acc36I	ACCTGC	1 cut(s)	1045
AccB1I	GGYRCC	3 cut(s)	263, 752, 1048
AccBSI	CCGCTC	4 cut(s)	919, 924, 1012, 1242
AccI	GTMKAC	1 cut(s)	48
AccII	CGCG	1 cut(s)	114
AccIII	TCCGGA	1 cut(s)	437
AclWI	GGATC	4 cut(s)	584, 597, 696, 780
AcoI	YGGCCR	1 cut(s)	1215
AcsI	RAATTY	1 cut(s)	1111
AcvI	CACGTG	1 cut(s)	556
AcyI	GRCGYC	2 cut(s)	240, 1049
AfaI	GTAC	4 cut(s)	467, 851, 983, 1248
AfiI	CCNNNNNNNGG	6 cut(s)	65, 487, 639, 718, 790, 1081
AgsI	TTSAA	6 cut(s)	461, 544, 655, 697, 880, 1374
AjnI	CCWGG	1 cut(s)	486
AloI	GAACNNNNNNTCC	2 cut(s)	779, 811
AluBI	AGCT	6 cut(s)	443, 604, 1192, 1327, 1368, 1390
AluI	AGCT	6 cut(s)	443, 604, 1192, 1327, 1368, 1390
Alw21I	GWGCWC	3 cut(s)	555, 606, 1122
AlwI	GGATC	4 cut(s)	584, 597, 696, 780
Ama87I	CYCGRG	4 cut(s)	415, 593, 914, 995
Aor13HI	TCCGGA	1 cut(s)	437
AoxI	GGCC	8 cut(s)	67, 709, 733, 960, 1077, 1157, 1215, 1257
ApoI	RAATTY	1 cut(s)	1111
ArsI	GACNNNNNNTTYG	2 cut(s)	1325, 1357
AspLEI	GCGC	2 cut(s)	116, 1051
AspS9I	GGNCC	8 cut(s)	490, 709, 734, 961, 1077, 1158, 1171, 1258
AsuC2I	CCSGG	5 cut(s)	237, 719, 1021, 1076, 1256
AsuHPI	GGTGA	7 cut(s)	112, 130, 689, 940, 1048, 1064, 1285
AvaI	CYCGRG	4 cut(s)	415, 593, 914, 995
AvaII	GGWCC	2 cut(s)	490, 1171
AxyI	CCTNAGG	1 cut(s)	608
BaeGI	GKGCMC	1 cut(s)	996
BalI	TGGCCA	1 cut(s)	1217
BamHI	GGATCC	1 cut(s)	589
BanI	GGYRCC	3 cut(s)	263, 752, 1048
BanII	GRGCYC	3 cut(s)	606, 915, 959
BbrPI	CACGTG	1 cut(s)	556
BbsI	GAAGAC	1 cut(s)	956
Bbv12I	GWGCWC	3 cut(s)	555, 606, 1122
BbvCI	CCTCAGC	1 cut(s)	1328
BccI	CCATC	3 cut(s)	755, 830, 1352
BceAI	ACGGC	4 cut(s)	266, 286, 544, 1064
BciT130I	CCWGG	1 cut(s)	488
BcnI	CCSGG	5 cut(s)	237, 719, 1021, 1076, 1256
BfaI	CTAG	4 cut(s)	44, 104, 482, 906
BfoI	RGCGCY	1 cut(s)	1052
BfuAI	ACCTGC	1 cut(s)	1045
BisI	GCNGC	2 cut(s)	1052, 1294
BlsI	GCNGC	2 cut(s)	1053, 1295
BmcAI	AGTACT	1 cut(s)	467
Bme1390I	CCNGG	6 cut(s)	237, 488, 719, 1021, 1076, 1256
Bme18I	GGWCC	2 cut(s)	490, 1171
BmeT110I	CYCGRG	4 cut(s)	415, 593, 914, 995
BmgT120I	GGNCC	8 cut(s)	490, 709, 734, 961, 1077, 1158, 1171, 1258
BmiI	GGNNCC	6 cut(s)	265, 479, 591, 754, 796, 1050
BmrFI	CCNGG	6 cut(s)	237, 488, 719, 1021, 1076, 1256
BoxI	GACNNNNGTC	1 cut(s)	828
BpiI	GAAGAC	1 cut(s)	956
Bpu10I	CCTNAGC	1 cut(s)	1328
BpuMI	CCSGG	5 cut(s)	237, 719, 1021, 1076, 1256
BsaAI	YACGTR	1 cut(s)	556
BsaHI	GRCGYC	2 cut(s)	240, 1049
BsaJI	CCNNGG	6 cut(s)	235, 268, 527, 996, 1080, 1161
BsaWI	WCCGGW	2 cut(s)	437, 797
BsaXI	ACNNNNNCTCC	4 cut(s)	93, 123, 665, 695
Bsc4I	CCNNNNNNNGG	6 cut(s)	65, 487, 639, 718, 790, 1081
Bse1I	ACTGG	3 cut(s)	322, 493, 1174
Bse21I	CCTNAGG	1 cut(s)	608
Bse3DI	GCAATG	1 cut(s)	1099
BseAI	TCCGGA	1 cut(s)	437
BseBI	CCWGG	1 cut(s)	488
BseDI	CCNNGG	6 cut(s)	235, 268, 527, 996, 1080, 1161
BseGI	GGATG	3 cut(s)	39, 318, 1390
BseLI	CCNNNNNNNGG	6 cut(s)	65, 487, 639, 718, 790, 1081
BseMI	GCAATG	1 cut(s)	1099
BseMII	CTCAG	3 cut(s)	591, 599, 1319
BseNI	ACTGG	3 cut(s)	322, 493, 1174
BseRI	GAGGAG	3 cut(s)	74, 161, 1022
BseSI	GKGCMC	1 cut(s)	996
BsgI	GTGCAG	1 cut(s)	45
Bsh1236I	CGCG	1 cut(s)	114
Bsh1285I	CGRYCG	1 cut(s)	533
BshFI	GGCC	8 cut(s)	69, 711, 735, 962, 1079, 1159, 1217, 1259
BshNI	GGYRCC	3 cut(s)	263, 752, 1048
BsiEI	CGRYCG	1 cut(s)	533
BsiHKAI	GWGCWC	3 cut(s)	555, 606, 1122
BsiHKCI	CYCGRG	4 cut(s)	415, 593, 914, 995
BsiSI	CCGG	9 cut(s)	12, 237, 438, 718, 756, 798, 1020, 1075, 1256
BslFI	GGGAC	2 cut(s)	319, 1346
BslI	CCNNNNNNNGG	6 cut(s)	65, 487, 639, 718, 790, 1081
BsmFI	GGGAC	2 cut(s)	319, 1346
BsnI	GGCC	8 cut(s)	69, 711, 735, 962, 1079, 1159, 1217, 1259
BsoBI	CYCGRG	4 cut(s)	415, 593, 914, 995
Bsp1286I	GDGCHC	6 cut(s)	555, 606, 915, 959, 996, 1122
Bsp13I	TCCGGA	1 cut(s)	437
Bsp143I	GATC	5 cut(s)	6, 315, 589, 688, 772
Bsp19I	CCATGG	1 cut(s)	1161
BspANI	GGCC	8 cut(s)	69, 711, 735, 962, 1079, 1159, 1217, 1259
BspCNI	CTCAG	3 cut(s)	592, 600, 1320
BspEI	TCCGGA	1 cut(s)	437
BspFNI	CGCG	1 cut(s)	114
BspLI	GGNNCC	6 cut(s)	265, 479, 591, 754, 796, 1050
BspMI	ACCTGC	1 cut(s)	1045
BspPI	GGATC	4 cut(s)	584, 597, 696, 780
BspQI	GCTCTTC	1 cut(s)	1375
BspT107I	GGYRCC	3 cut(s)	263, 752, 1048
BsrBI	CCGCTC	4 cut(s)	919, 924, 1012, 1242
BsrDI	GCAATG	1 cut(s)	1099
BsrI	ACTGG	3 cut(s)	322, 493, 1174
BssECI	CCNNGG	6 cut(s)	235, 268, 527, 996, 1080, 1161
BssMI	GATC	5 cut(s)	6, 315, 589, 688, 772
BssNI	GRCGYC	2 cut(s)	240, 1049
BssT1I	CCWWGG	1 cut(s)	1161
Bst2UI	CCWGG	1 cut(s)	488
Bst4CI	ACNGT	5 cut(s)	470, 638, 728, 986, 1401
Bst6I	CTCTTC	2 cut(s)	692, 1375
BstACI	GRCGYC	2 cut(s)	240, 1049
BstBAI	YACGTR	1 cut(s)	556
BstC8I	GCNNGC	4 cut(s)	624, 1031, 1157, 1240
BstDEI	CTNAG	4 cut(s)	600, 608, 1289, 1328
BstDSI	CCRYGG	3 cut(s)	268, 1080, 1161
BstEII	GGTNACC	1 cut(s)	1070
BstENI	CCTNNNNNAGG	1 cut(s)	63
BstF5I	GGATG	3 cut(s)	39, 318, 1390
BstFNI	CGCG	1 cut(s)	114
BstH2I	RGCGCY	1 cut(s)	1052
BstHHI	GCGC	2 cut(s)	116, 1051
BstKTI	GATC	5 cut(s)	9, 318, 592, 691, 775
BstMBI	GATC	5 cut(s)	6, 315, 589, 688, 772
BstMCI	CGRYCG	1 cut(s)	533
BstMWI	GCNNNNNNNGC	6 cut(s)	113, 270, 449, 968, 1030, 1346
BstNI	CCWGG	1 cut(s)	488
BstNSI	RCATGY	1 cut(s)	76
BstPAI	GACNNNNGTC	1 cut(s)	828
BstPI	GGTNACC	1 cut(s)	1070
BstSCI	CCNGG	6 cut(s)	235, 486, 717, 1019, 1074, 1254
BstSLI	GKGCMC	1 cut(s)	996
BstUI	CGCG	1 cut(s)	114
BstV2I	GAAGAC	1 cut(s)	956
BstX2I	RGATCY	1 cut(s)	589
BstYI	RGATCY	1 cut(s)	589
Bsu36I	CCTNAGG	1 cut(s)	608
BsuRI	GGCC	8 cut(s)	69, 711, 735, 962, 1079, 1159, 1217, 1259
BtgI	CCRYGG	3 cut(s)	268, 1080, 1161
BtsCI	GGATG	3 cut(s)	39, 318, 1390
BtsIMutI	CAGTG	3 cut(s)	329, 733, 1122
BveI	ACCTGC	1 cut(s)	1045
Cac8I	GCNNGC	4 cut(s)	624, 1031, 1157, 1240
CfoI	GCGC	2 cut(s)	116, 1051
Cfr13I	GGNCC	8 cut(s)	490, 709, 734, 961, 1077, 1158, 1171, 1258
CseI	GACGC	1 cut(s)	229
CsiI	ACCWGGT	1 cut(s)	486
Csp6I	GTAC	4 cut(s)	466, 850, 982, 1247
CviAII	CATG	5 cut(s)	73, 361, 619, 1162, 1207
CviQI	GTAC	4 cut(s)	466, 850, 982, 1247
DdeI	CTNAG	4 cut(s)	600, 608, 1289, 1328
DinI	GGCGCC	1 cut(s)	1050
DpnI	GATC	5 cut(s)	8, 317, 591, 690, 774
DpnII	GATC	5 cut(s)	6, 315, 589, 688, 772
EaeI	YGGCCR	1 cut(s)	1215
Eam1104I	CTCTTC	2 cut(s)	692, 1375
EarI	CTCTTC	2 cut(s)	692, 1375
EciI	GGCGGA	5 cut(s)	166, 380, 490, 1101, 1184
Ecl136II	GAGCTC	1 cut(s)	604
Eco130I	CCWWGG	1 cut(s)	1161
Eco24I	GRGCYC	3 cut(s)	606, 915, 959
Eco47I	GGWCC	2 cut(s)	490, 1171
Eco53kI	GAGCTC	1 cut(s)	604
Eco72I	CACGTG	1 cut(s)	556
Eco81I	CCTNAGG	1 cut(s)	608
Eco88I	CYCGRG	4 cut(s)	415, 593, 914, 995
Eco91I	GGTNACC	1 cut(s)	1070
EcoICRI	GAGCTC	1 cut(s)	604
EcoNI	CCTNNNNNAGG	1 cut(s)	63
EcoO65I	GGTNACC	1 cut(s)	1070
EcoRI	GAATTC	1 cut(s)	1111
EcoRII	CCWGG	1 cut(s)	486
EcoT14I	CCWWGG	1 cut(s)	1161
EcoT38I	GRGCYC	3 cut(s)	606, 915, 959
EgeI	GGCGCC	1 cut(s)	1050
EheI	GGCGCC	1 cut(s)	1050
ErhI	CCWWGG	1 cut(s)	1161
FaeI	CATG	5 cut(s)	76, 364, 622, 1165, 1210
FaiI	YATR	8 cut(s)	74, 125, 362, 620, 1163, 1179, 1208, 1220
FaqI	GGGAC	2 cut(s)	319, 1346
FatI	CATG	5 cut(s)	72, 360, 618, 1161, 1206
FauI	CCCGC	4 cut(s)	917, 1005, 1017, 1097
FblI	GTMKAC	1 cut(s)	48
Fnu4HI	GCNGC	2 cut(s)	1052, 1294
FokI	GGATG	3 cut(s)	26, 305, 1397
FriOI	GRGCYC	3 cut(s)	606, 915, 959
Fsp4HI	GCNGC	2 cut(s)	1052, 1294
FspBI	CTAG	4 cut(s)	44, 104, 482, 906
GlaI	GCGC	2 cut(s)	115, 1050
GluI	GCNGC	2 cut(s)	1052, 1294
HaeII	RGCGCY	1 cut(s)	1052
HaeIII	GGCC	8 cut(s)	69, 711, 735, 962, 1079, 1159, 1217, 1259
HapII	CCGG	9 cut(s)	12, 237, 438, 718, 756, 798, 1020, 1075, 1256
HgaI	GACGC	1 cut(s)	229
HhaI	GCGC	2 cut(s)	116, 1051
Hin1I	GRCGYC	2 cut(s)	240, 1049
Hin1II	CATG	5 cut(s)	76, 364, 622, 1165, 1210
Hin6I	GCGC	2 cut(s)	114, 1049
HinP1I	GCGC	2 cut(s)	114, 1049
HinfI	GANTC	8 cut(s)	332, 457, 596, 742, 865, 1089, 1283, 1298
HpaII	CCGG	9 cut(s)	12, 237, 438, 718, 756, 798, 1020, 1075, 1256
HphI	GGTGA	7 cut(s)	112, 130, 689, 940, 1048, 1064, 1285
Hpy166II	GTNNAC	4 cut(s)	49, 724, 887, 1247
Hpy188I	TCNGA	3 cut(s)	367, 601, 747
Hpy188III	TCNNGA	8 cut(s)	415, 438, 461, 593, 607, 665, 833, 1093
Hpy8I	GTNNAC	4 cut(s)	49, 724, 887, 1247
Hpy99I	CGWCG	4 cut(s)	245, 502, 505, 565
HpyAV	CCTTC	2 cut(s)	225, 436
HpyCH4III	ACNGT	5 cut(s)	470, 638, 728, 986, 1401
HpyCH4IV	ACGT	3 cut(s)	249, 555, 852
HpyCH4V	TGCA	1 cut(s)	62
HpyF10VI	GCNNNNNNNGC	6 cut(s)	113, 270, 449, 968, 1030, 1346
HpyF3I	CTNAG	4 cut(s)	600, 608, 1289, 1328
HpySE526I	ACGT	3 cut(s)	249, 555, 852
Hsp92I	GRCGYC	2 cut(s)	240, 1049
Hsp92II	CATG	5 cut(s)	76, 364, 622, 1165, 1210
HspAI	GCGC	2 cut(s)	114, 1049
KasI	GGCGCC	1 cut(s)	1048
Kpn2I	TCCGGA	1 cut(s)	437
Kzo9I	GATC	5 cut(s)	6, 315, 589, 688, 772
LguI	GCTCTTC	1 cut(s)	1375
LmnI	GCTCC	6 cut(s)	440, 550, 609, 921, 1009, 1324
MabI	ACCWGGT	1 cut(s)	486
MaeI	CTAG	4 cut(s)	44, 104, 482, 906
MaeII	ACGT	3 cut(s)	249, 555, 852
MaeIII	GTNAC	2 cut(s)	1070, 1284
MalI	GATC	5 cut(s)	8, 317, 591, 690, 774
MbiI	CCGCTC	4 cut(s)	919, 924, 1012, 1242
MboI	GATC	5 cut(s)	6, 315, 589, 688, 772
MboII	GAAGA	5 cut(s)	421, 709, 714, 961, 1362
MflI	RGATCY	1 cut(s)	589
MhlI	GDGCHC	6 cut(s)	555, 606, 915, 959, 996, 1122
MlsI	TGGCCA	1 cut(s)	1217
MluCI	AATT	3 cut(s)	872, 1111, 1262
MluNI	TGGCCA	1 cut(s)	1217
Mly113I	GGCGCC	1 cut(s)	1049
MlyI	GAGTC	6 cut(s)	341, 605, 751, 874, 1292, 1292
Mox20I	TGGCCA	1 cut(s)	1217
MroI	TCCGGA	1 cut(s)	437
MscI	TGGCCA	1 cut(s)	1217
MseI	TTAA	1 cut(s)	809
MslI	CAYNNNNRTG	2 cut(s)	1211, 1223
Msp20I	TGGCCA	1 cut(s)	1217
MspI	CCGG	9 cut(s)	12, 237, 438, 718, 756, 798, 1020, 1075, 1256
MspR9I	CCNGG	6 cut(s)	237, 488, 719, 1021, 1076, 1256
MvaI	CCWGG	1 cut(s)	488
MvnI	CGCG	1 cut(s)	114
MwoI	GCNNNNNNNGC	6 cut(s)	113, 270, 449, 968, 1030, 1346
NarI	GGCGCC	1 cut(s)	1049
NciI	CCSGG	5 cut(s)	237, 719, 1021, 1076, 1256
NcoI	CCATGG	1 cut(s)	1161
NdeII	GATC	5 cut(s)	6, 315, 589, 688, 772
NlaIII	CATG	5 cut(s)	76, 364, 622, 1165, 1210
NlaIV	GGNNCC	6 cut(s)	265, 479, 591, 754, 796, 1050
NmeAIII	GCCGAG	4 cut(s)	357, 938, 1280, 1306
NmuCI	GTSAC	2 cut(s)	1070, 1284
NspI	RCATGY	1 cut(s)	76
PaeR7I	CTCGAG	1 cut(s)	914
PaqCI	CACCTGC	1 cut(s)	1045
PciSI	GCTCTTC	1 cut(s)	1375
PfeI	GAWTC	2 cut(s)	457, 1089
PflFI	GACNNNGTC	1 cut(s)	488
PkrI	GCNGC	2 cut(s)	1053, 1295
PleI	GAGTC	6 cut(s)	340, 604, 750, 873, 1291, 1292
PluTI	GGCGCC	1 cut(s)	1052
PmaCI	CACGTG	1 cut(s)	556
PmlI	CACGTG	1 cut(s)	556
PpsI	GAGTC	6 cut(s)	340, 604, 750, 873, 1291, 1292
Ppu21I	YACGTR	1 cut(s)	556
PshAI	GACNNNNGTC	1 cut(s)	828
Psp124BI	GAGCTC	1 cut(s)	606
Psp6I	CCWGG	1 cut(s)	486
PspCI	CACGTG	1 cut(s)	556
PspEI	GGTNACC	1 cut(s)	1070
PspGI	CCWGG	1 cut(s)	486
PspN4I	GGNNCC	6 cut(s)	265, 479, 591, 754, 796, 1050
PspPI	GGNCC	8 cut(s)	490, 709, 734, 961, 1077, 1158, 1171, 1258
PspXI	VCTCGAGB	1 cut(s)	914
PsuI	RGATCY	1 cut(s)	589
PsyI	GACNNNGTC	1 cut(s)	488
RsaI	GTAC	4 cut(s)	467, 851, 983, 1248
RsaNI	GTAC	4 cut(s)	466, 850, 982, 1247
RseI	CAYNNNNRTG	2 cut(s)	1211, 1223
SacI	GAGCTC	1 cut(s)	606
SapI	GCTCTTC	1 cut(s)	1375
SaqAI	TTAA	1 cut(s)	809
SatI	GCNGC	2 cut(s)	1052, 1294
Sau3AI	GATC	5 cut(s)	6, 315, 589, 688, 772
Sau96I	GGNCC	8 cut(s)	490, 709, 734, 961, 1077, 1158, 1171, 1258
ScaI	AGTACT	1 cut(s)	467
SchI	GAGTC	6 cut(s)	341, 605, 751, 874, 1292, 1292
ScrFI	CCNGG	6 cut(s)	237, 488, 719, 1021, 1076, 1256
SduI	GDGCHC	6 cut(s)	555, 606, 915, 959, 996, 1122
SexAI	ACCWGGT	1 cut(s)	486
SfoI	GGCGCC	1 cut(s)	1050
Sfr274I	CTCGAG	1 cut(s)	914
SinI	GGWCC	2 cut(s)	490, 1171
SlaI	CTCGAG	1 cut(s)	914
SmiMI	CAYNNNNRTG	2 cut(s)	1211, 1223
SmlI	CTYRAG	1 cut(s)	914
SmoI	CTYRAG	1 cut(s)	914
Sse9I	AATT	3 cut(s)	872, 1111, 1262
SspDI	GGCGCC	1 cut(s)	1048
SspMI	CTAG	4 cut(s)	44, 104, 482, 906
SstI	GAGCTC	1 cut(s)	606
StyD4I	CCNGG	6 cut(s)	235, 486, 717, 1019, 1074, 1254
StyI	CCWWGG	1 cut(s)	1161
TaaI	ACNGT	5 cut(s)	470, 638, 728, 986, 1401
TaiI	ACGT	3 cut(s)	252, 558, 855
TaqI	TCGA	8 cut(s)	5, 87, 243, 330, 455, 563, 915, 1122
TaqII	GACCGA	1 cut(s)	519
TasI	AATT	3 cut(s)	872, 1111, 1262
TatI	WGTACW	1 cut(s)	465
TauI	GCSGC	2 cut(s)	1054, 1296
TfiI	GAWTC	2 cut(s)	457, 1089
Tru1I	TTAA	1 cut(s)	809
Tru9I	TTAA	1 cut(s)	809
TscAI	CASTG	3 cut(s)	329, 733, 1122
TseFI	GTSAC	2 cut(s)	1070, 1284
Tsp45I	GTSAC	2 cut(s)	1070, 1284
TspGWI	ACGGA	1 cut(s)	602
TspRI	CASTG	3 cut(s)	329, 733, 1122
Tth111I	GACNNNGTC	1 cut(s)	488
VpaK11BI	GGWCC	2 cut(s)	490, 1171
XagI	CCTNNNNNAGG	1 cut(s)	63
XapI	RAATTY	1 cut(s)	1111
XceI	RCATGY	1 cut(s)	76
XhoI	CTCGAG	1 cut(s)	914
XmiI	GTMKAC	1 cut(s)	48
XspI	CTAG	4 cut(s)	44, 104, 482, 906
ZrmI	AGTACT	1 cut(s)	467

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.