Rorug05G0086300

Belongs to the mitochondrial carrier (TC 2.A.29) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0005939
Physical Location & Seq
Forward (+)
7448678 .. 7453326
4649 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0086300.1

Sequence Viewer

Length: 3381 bp
ATGGAGAGAATTACTTGGTTCTTCCTGGCCGCGGCTAGCTGCTTAACCATGGCAGCAGCACAAACCAATAGTAATCTCACCACAGACGAGTATGCTCTTCTTGCTCTCAAAGCCCGTATCACCAGTGACCCTCAAAACATTATTTTCACCAACTGGTCAACCACCACCTCTGTTTGCAACTGGGTTGGTGTCACTTGTGGTGCACGCCATCATCGAGTCGCAAGCCTGAACCTCTCTTACATGGGACTCACAAGCACCATTCCTCCGGAACTTGGCAACCTTTCATTTCTTGTTAGGCTAAGCTTTAAAAATAATAGTTTTCACGGTACCTTGCCTCCAGAGTTGGCTCGTCTACGGAGATTAAAGTTCATTACCTTTGGTTTCAACAACTTTATGGGTATCATTCTGTCATGGTTCGGGTCCTTATCAAAACTTCAAGCCTTTTATTTGTATGGTAATCAGTTTTCGGGTTACATACCCAGTGCCATCTTCAACTTATCAGCACTCGACGTAATTGATTTGAAGTATAACCAGCTATCAGGTAGCATACCCGCTGCCATCTTCAACTTATCAGCACTCGAAGTAATTAATTTGAGCTATAACCAGCTATCAGGTAGCATACCGAGAGAAATCGGAAACCTAACAGTGTTGAAGGAGATATACCTTGATAGTAATAATTTCAAAGAACTTCCGAATGAGATTGGCAATTTGGATCAATTAGAAGAATTGTATGTGCAAAACAATGCCTTACAGGGGCCTCTTCCTACGGTTGTCTTCAACATGTCGTCTTTAACAATTTTGACCTTCTTTGGAAACAACTTGACTGGTAGTCTTCCGGACAATATATGTCAATATCTTCCGAGCATTCAAACCTTGAGTTTGTCAAAAAACCAACTTGTCGGTCCACTCTCATCCAAATGGTCGCAATGCAAACAACTTCTTTCATTAGAATTGGGGATGAATAGTTTCAGTGGAAGCATACCCACCAATATTGCCAATTTAACCCAAATACAGCAGATTGTCCTTAGCACAAACTATTTGACAGGTACTATACCACATGAGATTGGTTATCTTCCGAATTTAGAGACATTGGGCCTCGGAACTAATAATCTCAATGGCGTCATCCCATCTCCAATTTTCAATATTTCCACTATAACATCATTAGATCTTACTGCTAATGATCTCTTAGGTAGCCTCCCAACAAAGATAGGCCTTGAGCTTCCAAACCTAGTAGAGTTCTCTCTAGGAGGAAATAAACTCAGCGGAGTAATCCCCAAATCCATCTCCAATGCTTCGCAGCTCACGATGATAGATCTGGGAGATAACTTCCTTTCCGGCTTTATTCCTAGCACGCTATGCACCTTAACAAAGCTTGAGGTGCTTTCCTTATTCCAGAATAATTTAACCCTTGATACTTCTATTCCAGAATTAGATATTCTCTCTTGTTTGCCAAATCTTAAAAAATTGGTAGAATTCCAAATCCCAAACAATCCATTAAATGCCAAACTTCCGATTTCCTTTTGGAATTTCTCTACATCACTTCACATTGTCAAACTAGGGAATTGCAACATGAGAGGTAACATCCCCAATGAGATAGGCCACTCGAGCAGCTTGATACTCTTAGATCTGGGAGAAAATGAACTAAGTGGATCAGTTCCGACCTCAATGGGAAGATTACAAAACCTCCAAATTTTGGATTTGAGTGGTAACAAATTGCAAGGACACATTCCAGATGAGCTTTGTCAACTGAACCATCTTGGTGAGTTATCTTTGTATGGGAATCAACTTTCAGGTTCAATACCTTCATGCTTGGGTAATCTAACCGCAACCCTAAGAAGTCTATTATTAGGATCTAATATGTTGAATTCAACAATACCATCTACCTTGTGGAGACTCACATATATCTTGAAATTAGACTTATCATCCAATTCACTAATTGGACCTGTCTCGGAAGCTGTTGGTAATTTGAAAGTTGCCACACTTATAGAGTTATCAAACAACCAATTATCTGGTAGTATACCAAACAGCATTGGGAGCCTACAGAATCTGGTCCATCTATCCTTGGCAAATAATAATTTACAAGGACTAATTCCAAGTTCAGTTGGCAAGTCGATCAGCTTGGAATTTTTGGATTTATCCAAAAACAATTTGTCTGGAGTGATTCCCAAGTCTCTTGAATCACTCTCATATCTCAAGTATCTGAATTTGTCTTTCAACAAACTCAGAGGAGAAATTCCAACAGGCGGGCCTTTCAAAAACTTGTCTGCTCAGTCTTTTGTTTCAAACCATGGACTCTGTGGTGCATCCCAATTTCATGTTCCACCATGTAAAAGGAAAACTAGCAGATCTATCTTGAAATATGTCATTCCAGGGATCTTGTCACCGATGCTTCTTTTAACCATCTTATTTTGGATGGTCATGTTATGCAGAAAAAAGGATGTGGAAGCTCCAACAGAGACCGCTGTTTTGGCTCAACTTGGATGGAGAAGAATTTCATACAACGAACTTGTTAGTGCGACAAATGGATTCAACCTAAGAAACTTACTTGGGAGGGGGGGTTTTGGCTCAGTATATAGAGGAAGACTCTCAGATGGAATAGATGTTGCTATAAAGGTTTTTAATTCAGAGACAGAAAGCGCATTTACAAGTTTTGAGGTTGAATGTGAAATGCTAAGCAATATTCGTCACCGAAATCTCGTCAAAGTCATTAGTTGCTGCAGTGAAATTGATTTCAAAGCTCTTATACTGAATTTCATGCCTAATGGGAGCCTGGAAAAGTGGTTGTATTCTCAGAATTGTTCTTTGAGCATGCTGCAGAGGTTGGATATAATGATAGATGTTGCATCGGCATTGGAGTACCTCCATCATGGTTATGATGTACCTATTGTCCATTGTGATTTGAAGCCAAGCAATATACTACTAGATGATGATATGGGTGCACATGTTTCTGATTTTGGCATTGCAAAATTCCTAAATGGAGGAGATTCTATGACTCAAACCATGACCCTAGCCACAATTGGGTATATGGCTCCAGAGTATGGAATGGAAGGAAAAGTTTCGAGAAAGGGGGATGTGTATAGTTTTGGTATTGTAGTGATGGAAACATTCACAAGAAGGAAGCCAACAGATGAAATGTTTGTTGGGGATATGAGTTTAAAGCAATGGGTTGCGAATTCACTATATCAAGATGCAATAGTTGATGTTGTTGATGCCAATCTACTTGGGACCGAGGAAGATCATGATTTTGTGGGCAAGAGAGAATGTTTATCATCCATTATGACATTAGGTCTTGGTTGTTCAGCAGAATCACCAGAAGAGAGGATAAATATGCAAGAGGCTCTAGCCACACTCAATAAAATCAAGATCAAGCTTATAGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mito_carr

Protein Analysis

1126

Amino Acids

123.18

Weight (kDa)

5.8

Isoelectric Point (pI)

32.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 28 - 66 1.5e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 166 - 269 1.6e-10 Leucine-rich repeat region
LRR_8 PF13855 184 - 227 1.3e-06 Leucine rich repeat
LRR_14 PF23598 193 - 294 1.1e-09 Leucine-rich repeat region
LRR_14 PF23598 354 - 540 6.1e-06 Leucine-rich repeat region
LRR_8 PF13855 408 - 468 1.1e-07 Leucine rich repeat
LRR_14 PF23598 512 - 636 1.3e-07 Leucine-rich repeat region
LRR_8 PF13855 538 - 596 3.4e-06 Leucine rich repeat
LRR_14 PF23598 628 - 741 2.7e-06 Leucine-rich repeat region
LRR_8 PF13855 682 - 741 3.9e-08 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 845 - 1114 3.4e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 845 - 1115 2.3e-41 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 326
AccB1I GGYRCC 1 cut(s) 326
AccB7I CCANNNNNTGG 2 cut(s) 1693, 3038
AccI GTMKAC 2 cut(s) 352, 2017
AccII CGCG 1 cut(s) 32
AccIII TCCGGA 2 cut(s) 265, 835
AciI CCGC 7 cut(s) 30, 32, 552, 1263, 1824, 2244, 2460
AclWI GGATC 4 cut(s) 720, 1657, 1858, 2381
AcoI YGGCCR 1 cut(s) 27
AcyI GRCGYC 1 cut(s) 1119
AfaI GTAC 4 cut(s) 328, 1048, 2858, 2880
AfiI CCNNNNNNNGG 7 cut(s) 31, 272, 753, 1693, 2243, 3018, 3038
AflIII ACRYGT 2 cut(s) 780, 2941
AhdI GACNNNNNGTC 2 cut(s) 828, 3285
AjnI CCWGG 3 cut(s) 24, 2368, 2769
AjuI GAANNNNNNNTTGG 4 cut(s) 2301, 2333, 3123, 3155
Alw21I GWGCWC 2 cut(s) 205, 2941
Alw26I GTCTC 6 cut(s) 1079, 1885, 1951, 2175, 2450, 2621
Alw44I GTGCAC 2 cut(s) 201, 2937
AlwI GGATC 4 cut(s) 720, 1657, 1858, 2381
AlwNI CAGNNNCTG 1 cut(s) 2047
Ama87I CYCGRG 1 cut(s) 1603
Aor13HI TCCGGA 2 cut(s) 265, 835
AoxI GGCC 6 cut(s) 27, 755, 1093, 1210, 1597, 2246
ApaLI GTGCAC 2 cut(s) 201, 2937
ApeKI GCWGC 8 cut(s) 39, 53, 56, 554, 1297, 1608, 2715, 2812
ArsI GACNNNNNNTTYG 2 cut(s) 2449, 2481
AseI ATTAAT 1 cut(s) 588
Asp700I GAANNNNTTC 3 cut(s) 965, 2491, 3055
Asp718I GGTACC 1 cut(s) 326
AspLEI GCGC 1 cut(s) 2639
AspS9I GGNCC 8 cut(s) 420, 755, 902, 1093, 1940, 2050, 2246, 3225
AsuHPI GGTGA 7 cut(s) 70, 112, 139, 1772, 2373, 2678, 3300
AsuNHI GCTAGC 1 cut(s) 35
AvaI CYCGRG 1 cut(s) 1603
AvaII GGWCC 5 cut(s) 420, 902, 1940, 2050, 3225
BaeGI GKGCMC 2 cut(s) 205, 2941
BanI GGYRCC 1 cut(s) 326
BarI GAAGNNNNNNTAC 2 cut(s) 644, 676
BbsI GAAGAC 3 cut(s) 766, 824, 2587
Bbv12I GWGCWC 2 cut(s) 205, 2941
BbvI GCAGC 8 cut(s) 26, 65, 68, 541, 1309, 1620, 2702, 2799
BciT130I CCWGG 3 cut(s) 26, 2370, 2771
BcoDI GTCTC 6 cut(s) 1079, 1885, 1951, 2175, 2450, 2621
BfaI CTAG 9 cut(s) 36, 1229, 1244, 1347, 1556, 2340, 2921, 3008, 3341
BfmI CTRYAG 3 cut(s) 2039, 2716, 2813
BglII AGATCT 4 cut(s) 1165, 1312, 1624, 2345
BlpI GCTNAGC 2 cut(s) 299, 2672
Bme1390I CCNGG 3 cut(s) 26, 2370, 2771
Bme18I GGWCC 5 cut(s) 420, 902, 1940, 2050, 3225
BmeRI GACNNNNNGTC 2 cut(s) 828, 3285
BmeT110I CYCGRG 1 cut(s) 1603
BmgT120I GGNCC 8 cut(s) 420, 755, 902, 1093, 1940, 2050, 2246, 3225
BmiI GGNNCC 7 cut(s) 328, 421, 756, 2036, 2768, 3030, 3226
BmrFI CCNGG 3 cut(s) 26, 2370, 2771
BmrI ACTGGG 2 cut(s) 190, 474
BmsI GCATC 5 cut(s) 2312, 2376, 2852, 3178, 3199
BmtI GCTAGC 1 cut(s) 39
BmuI ACTGGG 2 cut(s) 190, 474
BpiI GAAGAC 3 cut(s) 766, 824, 2587
BplI GAGNNNNNCTC 2 cut(s) 2568, 2600
BpmI CTGGAG 3 cut(s) 321, 2175, 3015
Bpu10I CCTNAGC 1 cut(s) 1025
Bpu1102I GCTNAGC 2 cut(s) 299, 2672
BpuEI CTTGAG 4 cut(s) 895, 1235, 1394, 2177
BsaBI GATNNNNATC 1 cut(s) 3213
BsaHI GRCGYC 1 cut(s) 1119
BsaI GGTCTC 1 cut(s) 2450
BsaJI CCNNGG 7 cut(s) 30, 48, 1096, 2061, 2287, 2369, 3228
BsaWI WCCGGW 2 cut(s) 265, 835
BsaXI ACNNNNNCTCC 8 cut(s) 247, 277, 319, 349, 1668, 1698, 2542, 2572
Bsc4I CCNNNNNNNGG 7 cut(s) 31, 272, 753, 1693, 2243, 3018, 3038
Bse1I ACTGG 5 cut(s) 123, 158, 185, 480, 829
Bse3DI GCAATG 3 cut(s) 932, 2958, 3167
Bse8I GATNNNNATC 1 cut(s) 3213
BseAI TCCGGA 2 cut(s) 265, 835
BseBI CCWGG 3 cut(s) 26, 2370, 2771
BseDI CCNNGG 7 cut(s) 30, 48, 1096, 2061, 2287, 2369, 3228
BseJI GATNNNNATC 1 cut(s) 3213
BseLI CCNNNNNNNGG 7 cut(s) 31, 272, 753, 1693, 2243, 3018, 3038
BseMI GCAATG 3 cut(s) 932, 2958, 3167
BseMII CTCAG 6 cut(s) 1273, 2236, 2282, 2580, 2601, 2804
BseNI ACTGG 5 cut(s) 123, 158, 185, 480, 829
BseRI GAGGAG 2 cut(s) 2241, 2994
BseSI GKGCMC 2 cut(s) 205, 2941
BseXI GCAGC 8 cut(s) 26, 65, 68, 541, 1309, 1620, 2702, 2799
Bsh1236I CGCG 1 cut(s) 32
BshFI GGCC 6 cut(s) 29, 757, 1095, 1212, 1599, 2248
BshNI GGYRCC 1 cut(s) 326
BsiHKAI GWGCWC 2 cut(s) 205, 2941
BsiHKCI CYCGRG 1 cut(s) 1603
BsiSI CCGG 3 cut(s) 266, 836, 1335
BslFI GGGAC 2 cut(s) 258, 3238
BslI CCNNNNNNNGG 7 cut(s) 31, 272, 753, 1693, 2243, 3018, 3038
BsmAI GTCTC 6 cut(s) 1079, 1885, 1951, 2175, 2450, 2621
BsmFI GGGAC 2 cut(s) 258, 3238
BsmI GAATGC 1 cut(s) 864
BsnI GGCC 6 cut(s) 29, 757, 1095, 1212, 1599, 2248
Bso31I GGTCTC 1 cut(s) 2450
BsoBI CYCGRG 1 cut(s) 1603
Bsp1286I GDGCHC 2 cut(s) 205, 2941
Bsp13I TCCGGA 2 cut(s) 265, 835
Bsp1720I GCTNAGC 2 cut(s) 299, 2672
Bsp19I CCATGG 2 cut(s) 48, 2287
BspACI CCGC 7 cut(s) 30, 32, 552, 1263, 1824, 2244, 2460
BspANI GGCC 6 cut(s) 29, 757, 1095, 1212, 1599, 2248
BspCNI CTCAG 6 cut(s) 1272, 2235, 2281, 2579, 2600, 2803
BspEI TCCGGA 2 cut(s) 265, 835
BspFNI CGCG 1 cut(s) 32
BspHI TCATGA 1 cut(s) 3238
BspLI GGNNCC 7 cut(s) 328, 421, 756, 2036, 2768, 3030, 3226
BspMAI CTGCAG 2 cut(s) 2720, 2817
BspOI GCTAGC 1 cut(s) 39
BspPI GGATC 4 cut(s) 720, 1657, 1858, 2381
BspQI GCTCTTC 1 cut(s) 102
BspT107I GGYRCC 1 cut(s) 326
BspTNI GGTCTC 1 cut(s) 2450
BsrDI GCAATG 3 cut(s) 932, 2958, 3167
BsrI ACTGG 5 cut(s) 123, 158, 185, 480, 829
BssECI CCNNGG 7 cut(s) 30, 48, 1096, 2061, 2287, 2369, 3228
BssNAI GTATAC 1 cut(s) 2018
BssNI GRCGYC 1 cut(s) 1119
BssT1I CCWWGG 3 cut(s) 48, 2061, 2287
Bst1107I GTATAC 1 cut(s) 2018
Bst2UI CCWGG 3 cut(s) 26, 2370, 2771
Bst4CI ACNGT 3 cut(s) 326, 646, 769
Bst6I CTCTTC 3 cut(s) 102, 765, 3309
BstACI GRCGYC 1 cut(s) 1119
BstAPI GCANNNNNTGC 1 cut(s) 1356
BstC8I GCNNGC 6 cut(s) 37, 205, 223, 1352, 2246, 2810
BstDSI CCRYGG 3 cut(s) 30, 48, 2287
BstFNI CGCG 1 cut(s) 32
BstHHI GCGC 1 cut(s) 2639
BstMAI GTCTC 6 cut(s) 1079, 1885, 1951, 2175, 2450, 2621
BstMWI GCNNNNNNNGC 7 cut(s) 101, 110, 1356, 1378, 1605, 2034, 2468
BstNI CCWGG 3 cut(s) 26, 2370, 2771
BstNSI RCATGY 3 cut(s) 784, 2812, 2945
BstSCI CCNGG 3 cut(s) 24, 2368, 2769
BstSFI CTRYAG 3 cut(s) 2039, 2716, 2813
BstSLI GKGCMC 2 cut(s) 205, 2941
BstUI CGCG 1 cut(s) 32
BstV1I GCAGC 8 cut(s) 26, 65, 68, 541, 1309, 1620, 2702, 2799
BstV2I GAAGAC 3 cut(s) 766, 824, 2587
BstX2I RGATCY 6 cut(s) 1165, 1312, 1624, 1850, 2345, 2373
BstXI CCANNNNNNTGG 1 cut(s) 2009
BstYI RGATCY 6 cut(s) 1165, 1312, 1624, 1850, 2345, 2373
BstZ17I GTATAC 1 cut(s) 2018
BsuRI GGCC 6 cut(s) 29, 757, 1095, 1212, 1599, 2248
BtgI CCRYGG 3 cut(s) 30, 48, 2287
BtsI GCAGTG 1 cut(s) 2725
BtsIMutI CAGTG 5 cut(s) 130, 487, 651, 976, 2725
Cac8I GCNNGC 6 cut(s) 37, 205, 223, 1352, 2246, 2810
CaiI CAGNNNCTG 1 cut(s) 2047
CciI TCATGA 1 cut(s) 3238
CfoI GCGC 1 cut(s) 2639
Cfr13I GGNCC 8 cut(s) 420, 755, 902, 1093, 1940, 2050, 2246, 3225
Cfr42I CCGCGG 1 cut(s) 33
CseI GACGC 1 cut(s) 1108
Csp6I GTAC 4 cut(s) 327, 1047, 2857, 2879
CspCI CAANNNNNGTGG 2 cut(s) 973, 1008
CviQI GTAC 4 cut(s) 327, 1047, 2857, 2879
DraI TTTAAA 2 cut(s) 307, 3156
DriI GACNNNNNGTC 2 cut(s) 828, 3285
EaeI YGGCCR 1 cut(s) 27
Eam1104I CTCTTC 3 cut(s) 102, 765, 3309
Eam1105I GACNNNNNGTC 2 cut(s) 828, 3285
EarI CTCTTC 3 cut(s) 102, 765, 3309
Eco130I CCWWGG 3 cut(s) 48, 2061, 2287
Eco147I AGGCCT 1 cut(s) 1212
Eco31I GGTCTC 1 cut(s) 2450
Eco47I GGWCC 5 cut(s) 420, 902, 1940, 2050, 3225
Eco88I CYCGRG 1 cut(s) 1603
EcoO109I RGGNCCY 2 cut(s) 420, 755
EcoRI GAATTC 3 cut(s) 1472, 1864, 3172
EcoRII CCWGG 3 cut(s) 24, 2368, 2769
EcoT14I CCWWGG 3 cut(s) 48, 2061, 2287
ErhI CCWWGG 3 cut(s) 48, 2061, 2287
FaqI GGGAC 2 cut(s) 258, 3238
FauI CCCGC 2 cut(s) 559, 2237
FblI GTMKAC 2 cut(s) 352, 2017
FspBI CTAG 9 cut(s) 36, 1229, 1244, 1347, 1556, 2340, 2921, 3008, 3341
GlaI GCGC 1 cut(s) 2638
GsuI CTGGAG 3 cut(s) 321, 2175, 3015
HaeIII GGCC 6 cut(s) 29, 757, 1095, 1212, 1599, 2248
HapII CCGG 3 cut(s) 266, 836, 1335
HgaI GACGC 1 cut(s) 1108
HhaI GCGC 1 cut(s) 2639
Hin1I GRCGYC 1 cut(s) 1119
Hin6I GCGC 1 cut(s) 2637
HinP1I GCGC 1 cut(s) 2637
HincII GTYRAC 2 cut(s) 159, 1745
HindII GTYRAC 2 cut(s) 159, 1745
HindIII AAGCTT 3 cut(s) 301, 1370, 3368
HpaII CCGG 3 cut(s) 266, 836, 1335
HphI GGTGA 7 cut(s) 70, 112, 139, 1772, 2373, 2678, 3300
Hpy166II GTNNAC 7 cut(s) 159, 203, 353, 905, 1745, 2018, 2939
Hpy8I GTNNAC 7 cut(s) 159, 203, 353, 905, 1745, 2018, 2939
Hpy99I CGWCG 1 cut(s) 512
HpyAV CCTTC 5 cut(s) 646, 814, 1812, 3041, 3108
HpyCH4III ACNGT 3 cut(s) 326, 646, 769
HpyCH4IV ACGT 1 cut(s) 510
HpyF10VI GCNNNNNNNGC 7 cut(s) 101, 110, 1356, 1378, 1605, 2034, 2468
HpySE526I ACGT 1 cut(s) 510
Hsp92I GRCGYC 1 cut(s) 1119
HspAI GCGC 1 cut(s) 2637
Kpn2I TCCGGA 2 cut(s) 265, 835
KpnI GGTACC 1 cut(s) 330
KspI CCGCGG 1 cut(s) 33
LguI GCTCTTC 1 cut(s) 102
LmnI GCTCC 4 cut(s) 2034, 2452, 2766, 3034
Lsp1109I GCAGC 8 cut(s) 26, 65, 68, 541, 1309, 1620, 2702, 2799
LweI GCATC 5 cut(s) 2312, 2376, 2852, 3178, 3199
MaeI CTAG 9 cut(s) 36, 1229, 1244, 1347, 1556, 2340, 2921, 3008, 3341
MaeII ACGT 1 cut(s) 510
MaeIII GTNAC 7 cut(s) 125, 190, 470, 1577, 1706, 2379, 2684
MfeI CAATTG 1 cut(s) 3015
MflI RGATCY 6 cut(s) 1165, 1312, 1624, 1850, 2345, 2373
MhlI GDGCHC 2 cut(s) 205, 2941
MlyI GAGTC 6 cut(s) 225, 240, 1887, 2286, 2577, 2986
MmeI TCCRAC 4 cut(s) 1682, 2261, 2474, 2802
MroI TCCGGA 2 cut(s) 265, 835
MroXI GAANNNNTTC 3 cut(s) 965, 2491, 3055
MslI CAYNNNNRTG 3 cut(s) 916, 1758, 2871
MspA1I CMGCKG 4 cut(s) 32, 554, 1263, 2462
MspI CCGG 3 cut(s) 266, 836, 1335
MspR9I CCNGG 3 cut(s) 26, 2370, 2771
MunI CAATTG 1 cut(s) 3015
Mva1269I GAATGC 1 cut(s) 864
MvaI CCWGG 3 cut(s) 26, 2370, 2771
MvnI CGCG 1 cut(s) 32
MwoI GCNNNNNNNGC 7 cut(s) 101, 110, 1356, 1378, 1605, 2034, 2468
NcoI CCATGG 2 cut(s) 48, 2287
NheI GCTAGC 1 cut(s) 35
NlaIV GGNNCC 7 cut(s) 328, 421, 756, 2036, 2768, 3030, 3226
NmuCI GTSAC 4 cut(s) 125, 190, 2379, 2684
NspI RCATGY 3 cut(s) 784, 2812, 2945
PaeI GCATGC 1 cut(s) 2812
PaeR7I CTCGAG 1 cut(s) 1603
PagI TCATGA 1 cut(s) 3238
PceI AGGCCT 1 cut(s) 1212
PciI ACATGT 2 cut(s) 780, 2941
PciSI GCTCTTC 1 cut(s) 102
PcsI WCGNNNNNNNCGW 2 cut(s) 211, 1301
PctI GAATGC 1 cut(s) 864
PdmI GAANNNNTTC 3 cut(s) 965, 2491, 3055
PfeI GAWTC 7 cut(s) 1780, 2044, 2161, 2177, 2526, 2984, 3305
PflMI CCANNNNNTGG 2 cut(s) 1693, 3038
PleI GAGTC 6 cut(s) 224, 240, 1887, 2286, 2577, 2986
PpsI GAGTC 6 cut(s) 224, 240, 1887, 2286, 2577, 2986
PpuMI RGGWCCY 1 cut(s) 420
PscI ACATGT 2 cut(s) 780, 2941
PshBI ATTAAT 1 cut(s) 588
Psp5II RGGWCCY 1 cut(s) 420
Psp6I CCWGG 3 cut(s) 24, 2368, 2769
PspGI CCWGG 3 cut(s) 24, 2368, 2769
PspN4I GGNNCC 7 cut(s) 328, 421, 756, 2036, 2768, 3030, 3226
PspPI GGNCC 8 cut(s) 420, 755, 902, 1093, 1940, 2050, 2246, 3225
PspPPI RGGWCCY 1 cut(s) 420
PspXI VCTCGAGB 1 cut(s) 1603
PsrI GAACNNNNNNTAC 2 cut(s) 221, 253
PstI CTGCAG 2 cut(s) 2720, 2817
PstNI CAGNNNCTG 1 cut(s) 2047
PsuI RGATCY 6 cut(s) 1165, 1312, 1624, 1850, 2345, 2373
RsaI GTAC 4 cut(s) 328, 1048, 2858, 2880
RsaNI GTAC 4 cut(s) 327, 1047, 2857, 2879
RseI CAYNNNNRTG 3 cut(s) 916, 1758, 2871
SacII CCGCGG 1 cut(s) 33
SapI GCTCTTC 1 cut(s) 102
Sau96I GGNCC 8 cut(s) 420, 755, 902, 1093, 1940, 2050, 2246, 3225
SchI GAGTC 6 cut(s) 225, 240, 1887, 2286, 2577, 2986
ScrFI CCNGG 3 cut(s) 26, 2370, 2771
SduI GDGCHC 2 cut(s) 205, 2941
SfaNI GCATC 5 cut(s) 2312, 2376, 2852, 3178, 3199
SfcI CTRYAG 3 cut(s) 2039, 2716, 2813
Sfr274I CTCGAG 1 cut(s) 1603
Sfr303I CCGCGG 1 cut(s) 33
SgrBI CCGCGG 1 cut(s) 33
SinI GGWCC 5 cut(s) 420, 902, 1940, 2050, 3225
SlaI CTCGAG 1 cut(s) 1603
SmiMI CAYNNNNRTG 3 cut(s) 916, 1758, 2871
SmlI CTYRAG 5 cut(s) 874, 1214, 1373, 1603, 2192
SmoI CTYRAG 5 cut(s) 874, 1214, 1373, 1603, 2192
SphI GCATGC 1 cut(s) 2812
SseBI AGGCCT 1 cut(s) 1212
SsiI CCGC 7 cut(s) 30, 32, 552, 1263, 1824, 2244, 2460
SspI AATATT 3 cut(s) 991, 1144, 2680
SspMI CTAG 9 cut(s) 36, 1229, 1244, 1347, 1556, 2340, 2921, 3008, 3341
StuI AGGCCT 1 cut(s) 1212
StyD4I CCNGG 3 cut(s) 24, 2368, 2769
StyI CCWWGG 3 cut(s) 48, 2061, 2287
TaaI ACNGT 3 cut(s) 326, 646, 769
TaiI ACGT 1 cut(s) 513
TaqI TCGA 6 cut(s) 214, 507, 579, 1604, 2111, 3059
TaqII GACCGA 2 cut(s) 890, 3242
TauI GCSGC 2 cut(s) 32, 35
TfiI GAWTC 7 cut(s) 1780, 2044, 2161, 2177, 2526, 2984, 3305
TscAI CASTG 5 cut(s) 130, 487, 651, 976, 2725
TseFI GTSAC 4 cut(s) 125, 190, 2379, 2684
TseI GCWGC 8 cut(s) 39, 53, 56, 554, 1297, 1608, 2715, 2812
Tsp45I GTSAC 4 cut(s) 125, 190, 2379, 2684
TspGWI ACGGA 1 cut(s) 370
TspRI CASTG 5 cut(s) 130, 487, 651, 976, 2725
Van91I CCANNNNNTGG 2 cut(s) 1693, 3038
VneI GTGCAC 2 cut(s) 201, 2937
VpaK11BI GGWCC 5 cut(s) 420, 902, 1940, 2050, 3225
VspI ATTAAT 1 cut(s) 588
XceI RCATGY 3 cut(s) 784, 2812, 2945
XcmI CCANNNNNNNNNTGG 2 cut(s) 1884, 2294
XhoI CTCGAG 1 cut(s) 1603
XmiI GTMKAC 2 cut(s) 352, 2017
XmnI GAANNNNTTC 3 cut(s) 965, 2491, 3055
XspI CTAG 9 cut(s) 36, 1229, 1244, 1347, 1556, 2340, 2921, 3008, 3341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.