Rorug05G0343300

Haloacid dehalogenase-like hydrolase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0001386
Physical Location & Seq
Reverse (-)
42135330 .. 42138963
3634 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0343300.1

Sequence Viewer

Length: 1758 bp
ATGCCGCCGAAGAACGAGAAGACGAAGCTGGGGAGAGCCCTGGTGCGGCAGCACAACCAGTTGATTCAGCAGACCAAAGAGAAGGGCATCATGTACAGAAAGATGCAGAAGAAGGTTCTAGAATCCGTCACGGAGGTCAGCGACATCGACGCCGTAATCGAACAGGCCGACGAGGCCGACCGCCTCTTCTCCCTCAACAACCCTAACCCCAATCTTCTCATCAACCTGGACGGGAGTGAGATAACCCCGCCGGAGCAAAGGAGGGAGCAGCAGAGGAAGGAGGAGGCCTTGCACGCCGGTAGTCTCCAGGTGCCACGGAGGCCGCCGTGGACTCCGGAGATGTCGGTGGAGGAGCTCGATGACAATGAGAGGCAGGCCTTCTTGGTCTGGCGCAGAAGCCTCGCCAGGCTGGAGGAGAATGACAAGCTTGTTCTCACTCCTTTTGAGAAGAACCTGGATATCTGGAGGCAGCTGTGGCGTGTCGTTGAGCGCAGCGATTTGCTTGTGATGGTTGTTGATGCCCGAGATCCTCTGTTCTACCGCTGCCCTGATCTTGAGGTATATGCACGAGAGGTTGACAAGCACAAAAGGACAATGCTTCTTGTTAATAAAGCAGATCTGTTACCTGTATCTGTTAGAGAGAAGTGGGCAAAATATTTCCGTTCCCAAGAGATTCTTTTTGTCTTTTGGTCGGCCAAAGCTGCTTCAGCAGCCATAGAAGGGAAACAACTCAGTTCTCCGTGGAGTACAGAAAATTGCCAGCAGAATTCAGAGGACCCTGATACAAAAATATATGGGAGAGATGAGCTTTTGGCTCGTTTACAGTCTGAGGCTGAAGAGATAGTCAAACTTAGAAGGAACTCGGGATCCAGTGGCACAGGCTCATCCAACATTCGTTCGCAAATTGGAAGTGTATCACCTTCAACTAGTGTTGTTGTGGGGTTTGTTGGTTATCCAAATGTTGGGAAAAGCTCAACAATAAATGCCTTGGTAGGCCAGAAGAAGACAGGCGTTACCTCCACTCCAGGGAAGACGAAGCATTTCCAAACATTGATTATATCTGATGCGTTGACACTTTGTGACTGCCCTGGATTAGTGTTTCCATCCTTTTCAAGCTCAAGACATGAGATGATTGCTTGTGGTGTATTGCCAATTGATCGAATGACTGAAAAGAGGGAGGCTGTGCAGGTAGTGGCTGATCGAGTTCCAAGACATGTTATTGAAAAAGTGTACAATATTGATCTGCCAAAACCGAAATCCTATGAATTGCAATCGCGGCCACCTCTGGCAGCTGAGCTTATGCGAGCCTACTGTGCCTCCCGTGGGTATGTTGCCTCAAGTGGGCTGCCTGATGAAACTAGAGCTGCCCGTCAATTGTTGAGGGACTACATTGATGGGAAGCTGCCCCATTATGAAATGCCCCCTGGAGTGACAGATGAAGAAGATGACGTGGGACACATCTCCGAACAGCATGAATCAGATTCATCTGATATGGAAACCCCTCCAGATTCTGATGGTGAAAATGTGCCAGAGATTGATCATGTCCTGGATGACCTCAATTCATTTGACATAGCCAATGGGCTTGCTACCAATAAGAAAGCAACTGTCAAGAAGCTCAATGCACCTCATAAACAACACAAGAAGCCTCAGAGGAAAAAAGATCGCACATGGAGGGTAGGGAATGATGGTGGTGATGGAATGCCGGTAGCAAGAGTCTATCAGAAACCAGTGAACACGGGTCCTGTTAAGGTTGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Hydrolase_6 Hydrolase_like

Protein Analysis

585

Amino Acids

65.87

Weight (kDa)

6.68

Isoelectric Point (pI)

54.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MMR_HSR1 PF01926 313 - 379 3.3e-15 50S ribosome-binding GTPase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1177
AccB1I GGYRCC 1 cut(s) 310
AccB7I CCANNNNNTGG 1 cut(s) 962
AccII CGCG 1 cut(s) 1276
AccIII TCCGGA 1 cut(s) 334
AciI CCGC 7 cut(s) 5, 46, 181, 248, 323, 541, 1276
AclWI GGATC 3 cut(s) 521, 861, 874
AcoI YGGCCR 2 cut(s) 693, 1277
AcsI RAATTY 1 cut(s) 766
AcuI CTGAAG 2 cut(s) 690, 855
AcyI GRCGYC 1 cut(s) 150
AdeI CACNNNGTG 1 cut(s) 1079
AfaI GTAC 3 cut(s) 95, 748, 1232
AfiI CCNNNNNNNGG 6 cut(s) 45, 720, 962, 1026, 1323, 1341
AflIII ACRYGT 1 cut(s) 1213
AgsI TTSAA 3 cut(s) 924, 1113, 1223
AhlI ACTAGT 1 cut(s) 926
AjiI CACGTC 1 cut(s) 1450
AjnI CCWGG 9 cut(s) 39, 225, 306, 404, 453, 1024, 1087, 1423, 1545
AloI GAACNNNNNNTCC 2 cut(s) 851, 883
Alw21I GWGCWC 1 cut(s) 357
Alw26I GTCTC 1 cut(s) 308
AlwI GGATC 3 cut(s) 521, 861, 874
AlwNI CAGNNNCTG 1 cut(s) 1511
Ama87I CYCGRG 2 cut(s) 522, 862
Aor13HI TCCGGA 1 cut(s) 334
AoxI GGCC 8 cut(s) 165, 174, 285, 320, 375, 693, 994, 1277
ApoI RAATTY 1 cut(s) 766
Asp700I GAANNNNTTC 1 cut(s) 1040
AspLEI GCGC 2 cut(s) 393, 492
AspS9I GGNCC 2 cut(s) 775, 1739
AsuHPI GGTGA 3 cut(s) 909, 1529, 1703
AvaI CYCGRG 2 cut(s) 522, 862
AvaII GGWCC 2 cut(s) 775, 1739
BamHI GGATCC 1 cut(s) 866
BanI GGYRCC 1 cut(s) 310
BanII GRGCYC 2 cut(s) 40, 357
BauI CACGAG 1 cut(s) 567
BbsI GAAGAC 3 cut(s) 26, 1010, 1037
Bbv12I GWGCWC 1 cut(s) 357
BccI CCATC 6 cut(s) 502, 1111, 1388, 1508, 1679, 1688
BceAI ACGGC 2 cut(s) 137, 310
BcgI CGANNNNNNTGC 2 cut(s) 382, 416
BciT130I CCWGG 9 cut(s) 41, 227, 308, 406, 455, 1026, 1089, 1425, 1547
BclI TGATCA 1 cut(s) 1537
BcoDI GTCTC 1 cut(s) 308
BcuI ACTAGT 1 cut(s) 926
BfaI CTAG 3 cut(s) 119, 927, 1359
BfuAI ACCTGC 1 cut(s) 1177
BglI GCCNNNNNGGC 2 cut(s) 173, 319
BglII AGATCT 1 cut(s) 616
BlpI GCTNAGC 1 cut(s) 1293
Bme1390I CCNGG 9 cut(s) 41, 227, 308, 406, 455, 1026, 1089, 1425, 1547
Bme18I GGWCC 2 cut(s) 775, 1739
BmeT110I CYCGRG 2 cut(s) 522, 862
BmgBI CACGTC 1 cut(s) 1450
BmgT120I GGNCC 2 cut(s) 775, 1739
BmiI GGNNCC 4 cut(s) 312, 777, 868, 1740
BmrFI CCNGG 9 cut(s) 41, 227, 308, 406, 455, 1026, 1089, 1425, 1547
BmsI GCATC 4 cut(s) 93, 96, 508, 1054
BpiI GAAGAC 3 cut(s) 26, 1010, 1037
BpmI CTGGAG 6 cut(s) 290, 431, 484, 1008, 1446, 1488
Bpu1102I GCTNAGC 1 cut(s) 1293
BpuEI CTTGAG 3 cut(s) 575, 1102, 1321
BsaHI GRCGYC 1 cut(s) 150
BsaJI CCNNGG 9 cut(s) 39, 314, 326, 740, 987, 1025, 1087, 1321, 1423
BsaWI WCCGGW 1 cut(s) 334
BsaXI ACNNNNNCTCC 4 cut(s) 1006, 1036, 1301, 1331
Bsc4I CCNNNNNNNGG 6 cut(s) 45, 720, 962, 1026, 1323, 1341
Bse118I RCCGGY 2 cut(s) 296, 1702
Bse1I ACTGG 3 cut(s) 58, 870, 1727
BseAI TCCGGA 1 cut(s) 334
BseBI CCWGG 9 cut(s) 41, 227, 308, 406, 455, 1026, 1089, 1425, 1547
BseDI CCNNGG 9 cut(s) 39, 314, 326, 740, 987, 1025, 1087, 1321, 1423
BseGI GGATG 3 cut(s) 884, 1103, 1555
BseLI CCNNNNNNNGG 6 cut(s) 45, 720, 962, 1026, 1323, 1341
BseMII CTCAG 4 cut(s) 745, 819, 1284, 1661
BseNI ACTGG 3 cut(s) 58, 870, 1727
BseRI GAGGAG 3 cut(s) 296, 365, 428
BseYI CCCAGC 1 cut(s) 28
BsgI GTGCAG 1 cut(s) 1205
Bsh1236I CGCG 1 cut(s) 1276
Bsh1285I CGRYCG 1 cut(s) 181
BshFI GGCC 8 cut(s) 167, 176, 287, 322, 377, 695, 996, 1279
BshNI GGYRCC 1 cut(s) 310
BsiEI CGRYCG 1 cut(s) 181
BsiHKAI GWGCWC 1 cut(s) 357
BsiHKCI CYCGRG 2 cut(s) 522, 862
BsiSI CCGG 4 cut(s) 251, 297, 335, 1703
BslFI GGGAC 2 cut(s) 1397, 1467
BslI CCNNNNNNNGG 6 cut(s) 45, 720, 962, 1026, 1323, 1341
BsmAI GTCTC 1 cut(s) 308
BsmFI GGGAC 2 cut(s) 1397, 1467
BsmI GAATGC 1 cut(s) 1704
BsnI GGCC 8 cut(s) 167, 176, 287, 322, 377, 695, 996, 1279
BsoBI CYCGRG 2 cut(s) 522, 862
Bsp1286I GDGCHC 2 cut(s) 40, 357
Bsp13I TCCGGA 1 cut(s) 334
Bsp1407I TGTACA 2 cut(s) 93, 1230
Bsp143I GATC 9 cut(s) 526, 550, 616, 866, 1156, 1198, 1240, 1537, 1660
Bsp1720I GCTNAGC 1 cut(s) 1293
BspACI CCGC 7 cut(s) 5, 46, 181, 248, 323, 541, 1276
BspANI GGCC 8 cut(s) 167, 176, 287, 322, 377, 695, 996, 1279
BspCNI CTCAG 4 cut(s) 744, 820, 1285, 1660
BspEI TCCGGA 1 cut(s) 334
BspFNI CGCG 1 cut(s) 1276
BspLI GGNNCC 4 cut(s) 312, 777, 868, 1740
BspMI ACCTGC 1 cut(s) 1177
BspPI GGATC 3 cut(s) 521, 861, 874
BspT107I GGYRCC 1 cut(s) 310
BsrFI RCCGGY 2 cut(s) 296, 1702
BsrGI TGTACA 2 cut(s) 93, 1230
BsrI ACTGG 3 cut(s) 58, 870, 1727
BssAI RCCGGY 2 cut(s) 296, 1702
BssECI CCNNGG 9 cut(s) 39, 314, 326, 740, 987, 1025, 1087, 1321, 1423
BssMI GATC 9 cut(s) 526, 550, 616, 866, 1156, 1198, 1240, 1537, 1660
BssNI GRCGYC 1 cut(s) 150
BssSI CACGAG 1 cut(s) 567
BssT1I CCWWGG 1 cut(s) 987
Bst2BI CACGAG 1 cut(s) 567
Bst2UI CCWGG 9 cut(s) 41, 227, 308, 406, 455, 1026, 1089, 1425, 1547
Bst4CI ACNGT 3 cut(s) 825, 1313, 1606
Bst6I CTCTTC 2 cut(s) 191, 831
BstACI GRCGYC 1 cut(s) 150
BstAUI TGTACA 2 cut(s) 93, 1230
BstC8I GCNNGC 5 cut(s) 294, 375, 761, 1305, 1584
BstDEI CTNAG 5 cut(s) 731, 828, 851, 1293, 1647
BstDSI CCRYGG 4 cut(s) 314, 326, 740, 1321
BstF5I GGATG 3 cut(s) 884, 1103, 1555
BstFNI CGCG 1 cut(s) 1276
BstHHI GCGC 2 cut(s) 393, 492
BstKTI GATC 9 cut(s) 529, 553, 619, 869, 1159, 1201, 1243, 1540, 1663
BstMAI GTCTC 1 cut(s) 308
BstMBI GATC 9 cut(s) 526, 550, 616, 866, 1156, 1198, 1240, 1537, 1660
BstMCI CGRYCG 1 cut(s) 181
BstMWI GCNNNNNNNGC 9 cut(s) 173, 293, 319, 475, 701, 707, 710, 1276, 1313
BstNI CCWGG 9 cut(s) 41, 227, 308, 406, 455, 1026, 1089, 1425, 1547
BstNSI RCATGY 1 cut(s) 1217
BstSCI CCNGG 9 cut(s) 39, 225, 306, 404, 453, 1024, 1087, 1423, 1545
BstUI CGCG 1 cut(s) 1276
BstV2I GAAGAC 3 cut(s) 26, 1010, 1037
BstX2I RGATCY 3 cut(s) 526, 616, 866
BstYI RGATCY 3 cut(s) 526, 616, 866
BsuRI GGCC 8 cut(s) 167, 176, 287, 322, 377, 695, 996, 1279
BtgI CCRYGG 4 cut(s) 314, 326, 740, 1321
BtrI CACGTC 1 cut(s) 1450
BtsCI GGATG 3 cut(s) 884, 1103, 1555
BtsIMutI CAGTG 2 cut(s) 877, 1734
BveI ACCTGC 1 cut(s) 1177
Cac8I GCNNGC 5 cut(s) 294, 375, 761, 1305, 1584
CaiI CAGNNNCTG 1 cut(s) 1511
CfoI GCGC 2 cut(s) 393, 492
Cfr10I RCCGGY 2 cut(s) 296, 1702
Cfr13I GGNCC 2 cut(s) 775, 1739
CseI GACGC 1 cut(s) 158
Csp6I GTAC 3 cut(s) 94, 747, 1231
CviAII CATG 6 cut(s) 91, 1124, 1214, 1472, 1541, 1668
CviQI GTAC 3 cut(s) 94, 747, 1231
DdeI CTNAG 5 cut(s) 731, 828, 851, 1293, 1647
DpnI GATC 9 cut(s) 528, 552, 618, 868, 1158, 1200, 1242, 1539, 1662
DpnII GATC 9 cut(s) 526, 550, 616, 866, 1156, 1198, 1240, 1537, 1660
DraIII CACNNNGTG 1 cut(s) 1079
EaeI YGGCCR 2 cut(s) 693, 1277
Eam1104I CTCTTC 2 cut(s) 191, 831
EarI CTCTTC 2 cut(s) 191, 831
Ecl136II GAGCTC 1 cut(s) 355
Eco130I CCWWGG 1 cut(s) 987
Eco147I AGGCCT 2 cut(s) 287, 377
Eco24I GRGCYC 2 cut(s) 40, 357
Eco32I GATATC 1 cut(s) 460
Eco47I GGWCC 2 cut(s) 775, 1739
Eco53kI GAGCTC 1 cut(s) 355
Eco57I CTGAAG 2 cut(s) 690, 855
Eco88I CYCGRG 2 cut(s) 522, 862
EcoICRI GAGCTC 1 cut(s) 355
EcoO109I RGGNCCY 2 cut(s) 775, 1739
EcoRI GAATTC 1 cut(s) 766
EcoRII CCWGG 9 cut(s) 39, 225, 306, 404, 453, 1024, 1087, 1423, 1545
EcoRV GATATC 1 cut(s) 460
EcoT14I CCWWGG 1 cut(s) 987
EcoT38I GRGCYC 2 cut(s) 40, 357
ErhI CCWWGG 1 cut(s) 987
FaeI CATG 6 cut(s) 94, 1127, 1217, 1475, 1544, 1671
FalI AAGNNNNNCTT 2 cut(s) 660, 692
FaqI GGGAC 2 cut(s) 1397, 1467
FatI CATG 6 cut(s) 90, 1123, 1213, 1471, 1540, 1667
FauI CCCGC 1 cut(s) 255
FbaI TGATCA 1 cut(s) 1537
FokI GGATG 3 cut(s) 871, 1090, 1562
FriOI GRGCYC 2 cut(s) 40, 357
FspBI CTAG 3 cut(s) 119, 927, 1359
GlaI GCGC 2 cut(s) 392, 491
GsaI CCCAGC 1 cut(s) 32
GsuI CTGGAG 6 cut(s) 290, 431, 484, 1008, 1446, 1488
HaeIII GGCC 8 cut(s) 167, 176, 287, 322, 377, 695, 996, 1279
HapII CCGG 4 cut(s) 251, 297, 335, 1703
HgaI GACGC 1 cut(s) 158
HhaI GCGC 2 cut(s) 393, 492
Hin1I GRCGYC 1 cut(s) 150
Hin1II CATG 6 cut(s) 94, 1127, 1217, 1475, 1544, 1671
Hin6I GCGC 2 cut(s) 391, 490
HinP1I GCGC 2 cut(s) 391, 490
HincII GTYRAC 2 cut(s) 577, 1071
HindII GTYRAC 2 cut(s) 577, 1071
HindIII AAGCTT 1 cut(s) 425
HinfI GANTC 8 cut(s) 64, 122, 331, 673, 1475, 1481, 1508, 1713
HpaII CCGG 4 cut(s) 251, 297, 335, 1703
HphI GGTGA 3 cut(s) 909, 1529, 1703
Hpy166II GTNNAC 6 cut(s) 330, 577, 821, 1071, 1231, 1732
Hpy188I TCNGA 9 cut(s) 772, 829, 1063, 1465, 1480, 1489, 1513, 1650, 1722
Hpy188III TCNNGA 8 cut(s) 119, 335, 463, 554, 864, 1119, 1505, 1609
Hpy8I GTNNAC 6 cut(s) 330, 577, 821, 1071, 1231, 1732
Hpy99I CGWCG 2 cut(s) 152, 173
HpyAV CCTTC 7 cut(s) 76, 106, 271, 388, 713, 849, 930
HpyCH4III ACNGT 3 cut(s) 825, 1313, 1606
HpyCH4IV ACGT 1 cut(s) 1449
HpyCH4V TGCA 6 cut(s) 106, 292, 566, 1186, 1270, 1622
HpyF10VI GCNNNNNNNGC 9 cut(s) 173, 293, 319, 475, 701, 707, 710, 1276, 1313
HpyF3I CTNAG 5 cut(s) 731, 828, 851, 1293, 1647
HpySE526I ACGT 1 cut(s) 1449
Hsp92I GRCGYC 1 cut(s) 150
Hsp92II CATG 6 cut(s) 94, 1127, 1217, 1475, 1544, 1671
HspAI GCGC 2 cut(s) 391, 490
Kpn2I TCCGGA 1 cut(s) 334
Ksp22I TGATCA 1 cut(s) 1537
Kzo9I GATC 9 cut(s) 526, 550, 616, 866, 1156, 1198, 1240, 1537, 1660
LmnI GCTCC 3 cut(s) 253, 265, 352
LweI GCATC 4 cut(s) 93, 96, 508, 1054
MaeI CTAG 3 cut(s) 119, 927, 1359
MaeII ACGT 1 cut(s) 1449
MaeIII GTNAC 5 cut(s) 127, 621, 1012, 1079, 1429
MalI GATC 9 cut(s) 528, 552, 618, 868, 1158, 1200, 1242, 1539, 1662
MboI GATC 9 cut(s) 526, 550, 616, 866, 1156, 1198, 1240, 1537, 1660
MfeI CAATTG 2 cut(s) 1152, 1373
MflI RGATCY 3 cut(s) 526, 616, 866
MhlI GDGCHC 2 cut(s) 40, 357
MluCI AATT 7 cut(s) 754, 766, 903, 1152, 1265, 1373, 1558
MlyI GAGTC 2 cut(s) 325, 1722
MmeI TCCRAC 2 cut(s) 912, 1732
MroI TCCGGA 1 cut(s) 334
MroXI GAANNNNTTC 1 cut(s) 1040
MseI TTAA 2 cut(s) 606, 1746
MspA1I CMGCKG 3 cut(s) 472, 543, 1292
MspI CCGG 4 cut(s) 251, 297, 335, 1703
MspR9I CCNGG 9 cut(s) 41, 227, 308, 406, 455, 1026, 1089, 1425, 1547
MunI CAATTG 2 cut(s) 1152, 1373
Mva1269I GAATGC 1 cut(s) 1704
MvaI CCWGG 9 cut(s) 41, 227, 308, 406, 455, 1026, 1089, 1425, 1547
MvnI CGCG 1 cut(s) 1276
MwoI GCNNNNNNNGC 9 cut(s) 173, 293, 319, 475, 701, 707, 710, 1276, 1313
NdeII GATC 9 cut(s) 526, 550, 616, 866, 1156, 1198, 1240, 1537, 1660
NlaIII CATG 6 cut(s) 94, 1127, 1217, 1475, 1544, 1671
NlaIV GGNNCC 4 cut(s) 312, 777, 868, 1740
NmuCI GTSAC 3 cut(s) 127, 1079, 1429
NspI RCATGY 1 cut(s) 1217
PceI AGGCCT 2 cut(s) 287, 377
PciI ACATGT 1 cut(s) 1213
PcsI WCGNNNNNNNCGW 2 cut(s) 156, 165
PctI GAATGC 1 cut(s) 1704
PdmI GAANNNNTTC 1 cut(s) 1040
PfeI GAWTC 6 cut(s) 64, 122, 673, 1475, 1481, 1508
PflMI CCANNNNNTGG 1 cut(s) 962
PfoI TCCNGGA 1 cut(s) 1545
PleI GAGTC 2 cut(s) 325, 1721
PpsI GAGTC 2 cut(s) 325, 1721
PpuMI RGGWCCY 2 cut(s) 775, 1739
PscI ACATGT 1 cut(s) 1213
Psp124BI GAGCTC 1 cut(s) 357
Psp5II RGGWCCY 2 cut(s) 775, 1739
Psp6I CCWGG 9 cut(s) 39, 225, 306, 404, 453, 1024, 1087, 1423, 1545
PspFI CCCAGC 1 cut(s) 28
PspGI CCWGG 9 cut(s) 39, 225, 306, 404, 453, 1024, 1087, 1423, 1545
PspN4I GGNNCC 4 cut(s) 312, 777, 868, 1740
PspPI GGNCC 2 cut(s) 775, 1739
PspPPI RGGWCCY 2 cut(s) 775, 1739
PstNI CAGNNNCTG 1 cut(s) 1511
PsuI RGATCY 3 cut(s) 526, 616, 866
PvuII CAGCTG 2 cut(s) 472, 1292
RsaI GTAC 3 cut(s) 95, 748, 1232
RsaNI GTAC 3 cut(s) 94, 747, 1231
SacI GAGCTC 1 cut(s) 357
SaqAI TTAA 2 cut(s) 606, 1746
Sau3AI GATC 9 cut(s) 526, 550, 616, 866, 1156, 1198, 1240, 1537, 1660
Sau96I GGNCC 2 cut(s) 775, 1739
SchI GAGTC 2 cut(s) 325, 1722
ScrFI CCNGG 9 cut(s) 41, 227, 308, 406, 455, 1026, 1089, 1425, 1547
SduI GDGCHC 2 cut(s) 40, 357
SfaNI GCATC 4 cut(s) 93, 96, 508, 1054
SfiI GGCCNNNNNGGCC 1 cut(s) 173
SinI GGWCC 2 cut(s) 775, 1739
SmlI CTYRAG 3 cut(s) 554, 1117, 1336
SmoI CTYRAG 3 cut(s) 554, 1117, 1336
SpeI ACTAGT 1 cut(s) 926
Sse9I AATT 7 cut(s) 754, 766, 903, 1152, 1265, 1373, 1558
SseBI AGGCCT 2 cut(s) 287, 377
SsiI CCGC 7 cut(s) 5, 46, 181, 248, 323, 541, 1276
SspI AATATT 2 cut(s) 656, 1237
SspMI CTAG 3 cut(s) 119, 927, 1359
SstI GAGCTC 1 cut(s) 357
StuI AGGCCT 2 cut(s) 287, 377
StyD4I CCNGG 9 cut(s) 39, 225, 306, 404, 453, 1024, 1087, 1423, 1545
StyI CCWWGG 1 cut(s) 987
TaaI ACNGT 3 cut(s) 825, 1313, 1606
TaiI ACGT 1 cut(s) 1452
TaqI TCGA 5 cut(s) 147, 159, 357, 1159, 1201
TasI AATT 7 cut(s) 754, 766, 903, 1152, 1265, 1373, 1558
TatI WGTACW 3 cut(s) 93, 746, 1230
TauI GCSGC 4 cut(s) 7, 49, 325, 1279
TfiI GAWTC 6 cut(s) 64, 122, 673, 1475, 1481, 1508
Tru1I TTAA 2 cut(s) 606, 1746
Tru9I TTAA 2 cut(s) 606, 1746
TscAI CASTG 2 cut(s) 877, 1734
TseFI GTSAC 3 cut(s) 127, 1079, 1429
Tsp45I GTSAC 3 cut(s) 127, 1079, 1429
TspDTI ATGAA 7 cut(s) 1278, 1368, 1428, 1452, 1473, 1488, 1551
TspGWI ACGGA 5 cut(s) 115, 146, 331, 650, 729
TspRI CASTG 2 cut(s) 877, 1734
Van91I CCANNNNNTGG 1 cut(s) 962
VpaK11BI GGWCC 2 cut(s) 775, 1739
XapI RAATTY 1 cut(s) 766
XbaI TCTAGA 1 cut(s) 118
XceI RCATGY 1 cut(s) 1217
XmnI GAANNNNTTC 1 cut(s) 1040
XspI CTAG 3 cut(s) 119, 927, 1359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.