Rh1AG323700

Haloacid dehalogenase-like hydrolase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
55758526 .. 55760124
1599 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG323700.1

Sequence Viewer

Length: 276 bp
ATGGTAAGTTGGCTAAGCGGTTCTGTGGTTAGCAGGGGTGGCATCCCAGAGTCGAAACGAGCTGCTGAACTAAGTGAAGTTCTGGGAGTCAATATCCTGCCATCTCAGGTTCTCTGTGACGTTTTAAGATCTGGAGGGATTCCTGGATGGGATAATGACCATCAGCCACCCGTTTATTTTGCCGCAGATGACCTTGAATATAAGGCTGCATTTCCTTCTCAGAGACTTGGAATGGGTGCATTCAGAATTGCACTAGAAAGCATATTCAACAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

91

Amino Acids

9.86

Weight (kDa)

5.18

Isoelectric Point (pI)

57.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 18, 183
AgsI TTSAA 2 cut(s) 197, 268
AjnI CCWGG 1 cut(s) 142
AluBI AGCT 1 cut(s) 62
AluI AGCT 1 cut(s) 62
Alw26I GTCTC 1 cut(s) 217
ApeKI GCWGC 2 cut(s) 62, 206
BbvI GCAGC 2 cut(s) 49, 193
BccI CCATC 3 cut(s) 109, 141, 168
BciT130I CCWGG 1 cut(s) 144
BcoDI GTCTC 1 cut(s) 217
BfaI CTAG 1 cut(s) 254
BglII AGATCT 1 cut(s) 128
BisI GCNGC 3 cut(s) 63, 183, 207
BlpI GCTNAGC 1 cut(s) 14
BlsI GCNGC 3 cut(s) 64, 184, 208
Bme1390I CCNGG 1 cut(s) 144
BmrFI CCNGG 1 cut(s) 144
BmsI GCATC 1 cut(s) 51
BpmI CTGGAG 1 cut(s) 153
Bpu1102I GCTNAGC 1 cut(s) 14
BseBI CCWGG 1 cut(s) 144
BseGI GGATG 2 cut(s) 42, 152
BseMII CTCAG 2 cut(s) 119, 233
BseXI GCAGC 2 cut(s) 49, 193
BsmAI GTCTC 1 cut(s) 217
BsmI GAATGC 1 cut(s) 239
Bsp143I GATC 1 cut(s) 128
Bsp1720I GCTNAGC 1 cut(s) 14
BspACI CCGC 2 cut(s) 18, 183
BspCNI CTCAG 2 cut(s) 118, 232
BssMI GATC 1 cut(s) 128
Bst2UI CCWGG 1 cut(s) 144
BstDEI CTNAG 4 cut(s) 14, 71, 105, 219
BstF5I GGATG 2 cut(s) 42, 152
BstKTI GATC 1 cut(s) 131
BstMAI GTCTC 1 cut(s) 217
BstMBI GATC 1 cut(s) 128
BstMWI GCNNNNNNNGC 1 cut(s) 39
BstNI CCWGG 1 cut(s) 144
BstSCI CCNGG 1 cut(s) 142
BstV1I GCAGC 2 cut(s) 49, 193
BstX2I RGATCY 1 cut(s) 128
BstYI RGATCY 1 cut(s) 128
BtsCI GGATG 2 cut(s) 42, 152
CviJI RGCY 4 cut(s) 13, 62, 166, 206
CviKI_1 RGCY 4 cut(s) 13, 62, 166, 206
DdeI CTNAG 4 cut(s) 14, 71, 105, 219
DpnI GATC 1 cut(s) 130
DpnII GATC 1 cut(s) 128
EcoRII CCWGG 1 cut(s) 142
FaiI YATR 2 cut(s) 201, 263
Fnu4HI GCNGC 3 cut(s) 63, 183, 207
FokI GGATG 2 cut(s) 29, 159
Fsp4HI GCNGC 3 cut(s) 63, 183, 207
FspBI CTAG 1 cut(s) 254
GluI GCNGC 3 cut(s) 63, 183, 207
GsuI CTGGAG 1 cut(s) 153
HinfI GANTC 3 cut(s) 50, 87, 139
Hpy188I TCNGA 2 cut(s) 222, 245
Hpy188III TCNNGA 1 cut(s) 132
HpyAV CCTTC 1 cut(s) 225
HpyCH4IV ACGT 1 cut(s) 120
HpyCH4V TGCA 3 cut(s) 209, 239, 251
HpyF10VI GCNNNNNNNGC 1 cut(s) 39
HpyF3I CTNAG 4 cut(s) 14, 71, 105, 219
HpySE526I ACGT 1 cut(s) 120
Kzo9I GATC 1 cut(s) 128
LpnPI CCDG 9 cut(s) 19, 60, 68, 92, 110, 117, 129, 156, 256
Lsp1109I GCAGC 2 cut(s) 49, 193
LweI GCATC 1 cut(s) 51
MaeI CTAG 1 cut(s) 254
MaeII ACGT 1 cut(s) 120
MaeIII GTNAC 1 cut(s) 116
MalI GATC 1 cut(s) 130
MboI GATC 1 cut(s) 128
MflI RGATCY 1 cut(s) 128
MluCI AATT 1 cut(s) 246
MlyI GAGTC 2 cut(s) 59, 96
MnlI CCTC 1 cut(s) 128
MseI TTAA 1 cut(s) 125
MspR9I CCNGG 1 cut(s) 144
Mva1269I GAATGC 1 cut(s) 239
MvaI CCWGG 1 cut(s) 144
MwoI GCNNNNNNNGC 1 cut(s) 39
NdeII GATC 1 cut(s) 128
NmuCI GTSAC 1 cut(s) 116
PctI GAATGC 1 cut(s) 239
PfeI GAWTC 1 cut(s) 139
PfoI TCCNGGA 1 cut(s) 142
PkrI GCNGC 3 cut(s) 64, 184, 208
PleI GAGTC 2 cut(s) 58, 95
PpsI GAGTC 2 cut(s) 58, 95
Psp6I CCWGG 1 cut(s) 142
PspGI CCWGG 1 cut(s) 142
PsuI RGATCY 1 cut(s) 128
SaqAI TTAA 1 cut(s) 125
SatI GCNGC 3 cut(s) 63, 183, 207
Sau3AI GATC 1 cut(s) 128
SchI GAGTC 2 cut(s) 59, 96
ScrFI CCNGG 1 cut(s) 144
SetI ASST 5 cut(s) 64, 111, 123, 195, 275
SfaNI GCATC 1 cut(s) 51
Sse9I AATT 1 cut(s) 246
SsiI CCGC 2 cut(s) 18, 183
SspMI CTAG 1 cut(s) 254
StyD4I CCNGG 1 cut(s) 142
TaiI ACGT 1 cut(s) 123
TaqI TCGA 1 cut(s) 53
TasI AATT 1 cut(s) 246
TauI GCSGC 1 cut(s) 185
TfiI GAWTC 1 cut(s) 139
Tru1I TTAA 1 cut(s) 125
Tru9I TTAA 1 cut(s) 125
TseFI GTSAC 1 cut(s) 116
TseI GCWGC 2 cut(s) 62, 206
Tsp45I GTSAC 1 cut(s) 116
XspI CTAG 1 cut(s) 254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.