Rorug05G0417700

LOB domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
58035679 .. 58042861
7183 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0417700.1

Sequence Viewer

Length: 2532 bp
ATGGCTATGGCTGTGGCTCATCATCAGCACAGAGAGAGTAGCAGTGGTAGTAGTATAAACAAGCATCTTAATGATTCTGGAAAATATGTGCGCTACACTTCTGAGCAAGTGGAAGCTCTTGAACGTGTCTATGCCGAGTGTCCCAAGCCGAGTTCTTTGAGAAGGCAGCAATTGATCCGAGACTGCCCCATTCTTTCAAACATAGAGCCCAAGCAGATCAAAGTCTGGTTTCAGAACCGCAGATGTCGAGAAAAGCAGAGAAAAGAGTCTTCGAGGCTGCAGACTGTTAACAGGAAATTATCAGCAATGAACAAGTTGTTGATGGAGGAAAATGATCGACTGCAGAAACAGGTGTCTCAGCTTGTTTGTGAGAATGGGTACATGCGCCAACAGCTACATACTGTACCAGCTACTGATGCAAGCTGCGATTCTGTGGTTACAACTCCTCAGCATTCTCTCAGAGATGCTAATAATCCTGCTGGACTCCTCTCCATAGCGGAGGAGACCTTGGCAGAGTTCCTTTCTAAGGCTACAGGAACTGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCTATCTCACAAAGTTGCAGTGGAGTGGCAGCTCGAGCCTGTGGTCTCGTAAGTTTAGAGCCTACGAAGATTACAGAGATCCTTAAAGATCGTCCATCTTGGTTCCGGGACTGTCGGAGCCTTGAAGTTTTTACTATGTTTCCTGCTGGAAATGGAGGGACTATAGAACTCATATATACGCAGACATATGCTCCGACTACACTGGCTCCTGCAAGGGATTTTTGGACCCTAAGATACACTACTACTTTAGACAATGGCAGTTTTGTGGTATGTGAGAGATCTCTTTCTGGTTCTGGTGCTGGCCCCAATGGAGCTTCTGCTGCCCAGTTTGTTAGAGCAGAAATGCTTCCTAGTGGTTATCTGATTCGACCGTGTGAGGGTGGAGGATCAATCATTCATATTGTTGACCACCTGAACCTTGAGGCTTGGAGTGTGCCAGAAGTGCTGCGACCGCTTTATGAATCGTCCAAAGTGGTAGCACAAAAAAGGACTATTGCGGCATTGCGTTACATCAGGCAAATAGCTCAGGAGACGAGTGGTGAAGTTGTGTACAGTTTTGGCAGGCAGCCAGCTGTTCTGCGAACTTTTAGCCAAAGATTAATCAGAGGCTTTAATGATGCTGTCAATGGATTTAATGATGATGGCTGGTCATTGATCAACTGTGATGGAGCTGAAGACATTATAATGGCCGTTAATTCAACCAAGAATTTGACTACTACGAATCCTGCTAATTCCTTTGCTTTTCTTGGTGGTATTCTGTGTGCAAAGGCTTCCATGCTACTCCAAAATGTCCCCCCAGCTGTCCTGGTTCGTTTCTTGAGGGAGCATCGTTCAGAGTGGGCTGATTTCAATGTTGATGCCTATTCTGCTGCGTCTTTGAAATCTGGTTCATATGCATACCCAGGGATGAGGCCAACAAGGTTTACTGGGGGCCAAATCATCATGCCACTTGGTCACACCATTGAACACGAAGAGTTGCTAGAAGTTGTTCGTCTTGAAGGCCATTCTTTCTCTCAAGAAGAAGCATTTGCATCACGGGACATTCATCTCTTACAGATATGTAGTGGAGTTGATGAGAATGCTGTTGGAGCCTGTTCGGAGCTTGTTTTTGCTCCAATTGATGAGATGTTTCCAGACGATGCTCCGTTGCTTCCCTCTGGTTTCCGCATTATTCCTTTGGAATCAAAAACAAGTGATTCAAAAGACGCCATGGCTACTCATCGGACATTAGATCTGACGTCCAGTCTTGAAGTGGGCTCAACAACAAACCATAATGCTGGAGATTTGAATTCATTTCATAACACTCGATCAGTATTAACGATTGCCTTCCAGTTTCCCTTCGAGAGTAGTCTACAGGATAATGTTGCATCCATGGCACGCCAATATGTACGAAATGTCATCTCATCAGTGCAGAGAGTTGCAATGGCCATATCTCCATCAGGATTGAGTCCGTCCGTGGGACCAAAATTATCTCCCAGCTCTCCAGAAGCACTAACACTGGCTAACTGGATCTGCCAGAGCTATAGTTATCATATAGGGGCGGAACTGCTGCAGCCTGATTCCTTGGGTGGTGACTCGATGTTGAAACATCTATGGCATCACCAAGATGCGATTTTGTGCTGTTCATTGAAGTCACTGCCGGTTTTCATCTTTGCTAACCAGGCAGGGCTTGACATGCTGGAGACAACTCTTGTTGCTCTTCAGGACATCTCATTAGATAAGATTTTTGATGAGTGTGGACGTAAGACATTGTGCGCCGACTTTGCTAAACTAATGCAGCAGGGATTTGCTTACTTGCCAGCTGGGATTTGCATGTCAACAATGGGGCGCCATATCTCATATGAACAGGCCATTGGATGGAAAGTTCTTTCTGGAGAAGATAACTCTGTCCATTGCCTTGCCTTCACGTTTGTAAACTGGTCTTTTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

843

Amino Acids

92.74

Weight (kDa)

6.02

Isoelectric Point (pI)

50.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Homeodomain PF00046 28 - 86 2.9e-15 Homeodomain
START PF01852 165 - 373 5.8e-48 START domain
MEKHLA PF08670 699 - 842 5.2e-45 MEKHLA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1283
AatII GACGTC 1 cut(s) 1841
AccB1I GGYRCC 1 cut(s) 2427
AccB7I CCANNNNNTGG 1 cut(s) 2457
AccI GTMKAC 1 cut(s) 1951
AccIII TCCGGA 1 cut(s) 580
AciI CCGC 6 cut(s) 238, 497, 1052, 1097, 1765, 2141
AclWI GGATC 5 cut(s) 169, 602, 673, 994, 2117
AcoI YGGCCR 2 cut(s) 1287, 2025
AcsI RAATTY 2 cut(s) 1306, 1888
AcuI CTGAAG 2 cut(s) 1293, 2285
AcyI GRCGYC 3 cut(s) 1806, 1838, 2428
AfaI GTAC 4 cut(s) 380, 405, 1151, 1989
AfiI CCNNNNNNNGG 4 cut(s) 526, 977, 2057, 2457
AflIII ACRYGT 1 cut(s) 124
AhdI GACNNNNNGTC 1 cut(s) 1842
AjnI CCWGG 5 cut(s) 562, 574, 1404, 1501, 2259
AjuI GAANNNNNNNTTGG 2 cut(s) 2436, 2468
AloI GAACNNNNNNTCC 2 cut(s) 2448, 2480
Alw26I GTCTC 6 cut(s) 174, 360, 497, 650, 1124, 2276
AlwI GGATC 5 cut(s) 169, 602, 673, 994, 2117
AlwNI CAGNNNCTG 2 cut(s) 413, 539
Ama87I CYCGRG 1 cut(s) 633
Aor13HI TCCGGA 1 cut(s) 580
AoxI GGCC 7 cut(s) 901, 1287, 1511, 1531, 1600, 2025, 2448
ApoI RAATTY 2 cut(s) 1306, 1888
AseI ATTAAT 1 cut(s) 1199
Asp700I GAANNNNTTC 2 cut(s) 945, 1587
AspLEI GCGC 4 cut(s) 93, 387, 2357, 2430
AspS9I GGNCC 6 cut(s) 553, 578, 825, 902, 1531, 2060
AsuC2I CCSGG 1 cut(s) 707
AsuHPI GGTGA 3 cut(s) 1151, 2183, 2192
AvaI CYCGRG 1 cut(s) 633
AvaII GGWCC 4 cut(s) 553, 578, 825, 2060
BalI TGGCCA 1 cut(s) 2027
BanI GGYRCC 1 cut(s) 2427
BanII GRGCYC 2 cut(s) 210, 1859
BbsI GAAGAC 2 cut(s) 261, 1281
BbvCI CCTCAGC 1 cut(s) 447
BccI CCATC 6 cut(s) 316, 703, 1235, 1259, 2044, 2451
BceAI ACGGC 1 cut(s) 1274
BciT130I CCWGG 5 cut(s) 564, 576, 1406, 1503, 2261
BclI TGATCA 1 cut(s) 1254
BcnI CCSGG 1 cut(s) 707
BcoDI GTCTC 6 cut(s) 174, 360, 497, 650, 1124, 2276
BfaI CTAG 2 cut(s) 951, 1580
BfmI CTRYAG 7 cut(s) 278, 341, 531, 762, 1952, 2122, 2150
BfoI RGCGCY 1 cut(s) 2431
BglII AGATCT 2 cut(s) 878, 1831
Bme1390I CCNGG 6 cut(s) 564, 576, 707, 1406, 1503, 2261
Bme18I GGWCC 4 cut(s) 553, 578, 825, 2060
BmeRI GACNNNNNGTC 1 cut(s) 1842
BmeT110I CYCGRG 1 cut(s) 633
BmgT120I GGNCC 6 cut(s) 553, 578, 825, 902, 1531, 2060
BmrFI CCNGG 6 cut(s) 564, 576, 707, 1406, 1503, 2261
BmrI ACTGGG 2 cut(s) 919, 1536
BmuI ACTGGG 2 cut(s) 919, 1536
BpiI GAAGAC 2 cut(s) 261, 1281
BpmI CTGGAG 4 cut(s) 1899, 2067, 2300, 2493
Bpu10I CCTNAGC 2 cut(s) 447, 1125
BpuEI CTTGAG 3 cut(s) 1040, 1438, 1599
BpuMI CCSGG 1 cut(s) 707
BsaHI GRCGYC 3 cut(s) 1806, 1838, 2428
BsaI GGTCTC 2 cut(s) 497, 650
BsaJI CCNNGG 8 cut(s) 507, 563, 1501, 1502, 1809, 1971, 2055, 2163
BsaWI WCCGGW 1 cut(s) 580
BsaXI ACNNNNNCTCC 4 cut(s) 775, 790, 805, 820
Bsc4I CCNNNNNNNGG 4 cut(s) 526, 977, 2057, 2457
Bse118I RCCGGY 1 cut(s) 2239
Bse1I ACTGG 8 cut(s) 807, 925, 1531, 1842, 1930, 2103, 2111, 2522
Bse3DI GCAATG 4 cut(s) 312, 1100, 2028, 2491
BseAI TCCGGA 1 cut(s) 580
BseBI CCWGG 5 cut(s) 564, 576, 1406, 1503, 2261
BseDI CCNNGG 8 cut(s) 507, 563, 1501, 1502, 1809, 1971, 2055, 2163
BseGI GGATG 4 cut(s) 573, 1512, 1967, 2462
BseLI CCNNNNNNNGG 4 cut(s) 526, 977, 2057, 2457
BseMI GCAATG 4 cut(s) 312, 1100, 2028, 2491
BseMII CTCAG 5 cut(s) 93, 371, 461, 472, 1139
BseNI ACTGG 8 cut(s) 807, 925, 1531, 1842, 1930, 2103, 2111, 2522
BseRI GAGGAG 3 cut(s) 435, 476, 515
BseYI CCCAGC 3 cut(s) 1396, 2075, 2402
BsgI GTGCAG 1 cut(s) 2030
Bsh1285I CGRYCG 2 cut(s) 971, 1052
BshFI GGCC 7 cut(s) 903, 1289, 1513, 1533, 1602, 2027, 2450
BshNI GGYRCC 1 cut(s) 2427
BsiEI CGRYCG 2 cut(s) 971, 1052
BsiHKCI CYCGRG 1 cut(s) 633
BsiSI CCGG 3 cut(s) 581, 706, 2240
BslFI GGGAC 6 cut(s) 126, 722, 772, 1376, 1652, 2073
BslI CCNNNNNNNGG 4 cut(s) 526, 977, 2057, 2457
BsmAI GTCTC 6 cut(s) 174, 360, 497, 650, 1124, 2276
BsmBI CGTCTC 1 cut(s) 1124
BsmFI GGGAC 6 cut(s) 126, 722, 772, 1376, 1652, 2073
BsmI GAATGC 2 cut(s) 451, 1684
BsnI GGCC 7 cut(s) 903, 1289, 1513, 1533, 1602, 2027, 2450
Bso31I GGTCTC 2 cut(s) 497, 650
BsoBI CYCGRG 1 cut(s) 633
Bsp1286I GDGCHC 2 cut(s) 210, 1859
Bsp13I TCCGGA 1 cut(s) 580
Bsp1407I TGTACA 1 cut(s) 1149
Bsp19I CCATGG 2 cut(s) 1809, 1971
BspACI CCGC 6 cut(s) 238, 497, 1052, 1097, 1765, 2141
BspANI GGCC 7 cut(s) 903, 1289, 1513, 1533, 1602, 2027, 2450
BspCNI CTCAG 5 cut(s) 94, 370, 460, 471, 1138
BspEI TCCGGA 1 cut(s) 580
BspMAI CTGCAG 3 cut(s) 282, 345, 2154
BspPI GGATC 5 cut(s) 169, 602, 673, 994, 2117
BspQI GCTCTTC 1 cut(s) 2304
BspT107I GGYRCC 1 cut(s) 2427
BspTNI GGTCTC 2 cut(s) 497, 650
BsrDI GCAATG 4 cut(s) 312, 1100, 2028, 2491
BsrFI RCCGGY 1 cut(s) 2239
BsrGI TGTACA 1 cut(s) 1149
BsrI ACTGG 8 cut(s) 807, 925, 1531, 1842, 1930, 2103, 2111, 2522
BssAI RCCGGY 1 cut(s) 2239
BssECI CCNNGG 8 cut(s) 507, 563, 1501, 1502, 1809, 1971, 2055, 2163
BssNI GRCGYC 3 cut(s) 1806, 1838, 2428
BssT1I CCWWGG 4 cut(s) 507, 1809, 1971, 2163
Bst2UI CCWGG 5 cut(s) 564, 576, 1406, 1503, 2261
Bst4CI ACNGT 6 cut(s) 286, 403, 713, 972, 1154, 1262
Bst6I CTCTTC 2 cut(s) 1566, 2304
BstACI GRCGYC 3 cut(s) 1806, 1838, 2428
BstAUI TGTACA 1 cut(s) 1149
BstC8I GCNNGC 6 cut(s) 421, 901, 1163, 1170, 1978, 2400
BstDEI CTNAG 7 cut(s) 102, 357, 447, 458, 525, 830, 1125
BstDSI CCRYGG 3 cut(s) 1809, 1971, 2055
BstENI CCTNNNNNAGG 1 cut(s) 524
BstF5I GGATG 4 cut(s) 573, 1512, 1967, 2462
BstH2I RGCGCY 1 cut(s) 2431
BstHHI GCGC 4 cut(s) 93, 387, 2357, 2430
BstMAI GTCTC 6 cut(s) 174, 360, 497, 650, 1124, 2276
BstMCI CGRYCG 2 cut(s) 971, 1052
BstNI CCWGG 5 cut(s) 564, 576, 1406, 1503, 2261
BstNSI RCATGY 3 cut(s) 385, 2278, 2416
BstSCI CCNGG 6 cut(s) 562, 574, 705, 1404, 1501, 2259
BstSFI CTRYAG 7 cut(s) 278, 341, 531, 762, 1952, 2122, 2150
BstV2I GAAGAC 2 cut(s) 261, 1281
BstX2I RGATCY 5 cut(s) 594, 678, 878, 1831, 2109
BstXI CCANNNNNNTGG 2 cut(s) 563, 1877
BstYI RGATCY 5 cut(s) 594, 678, 878, 1831, 2109
BsuRI GGCC 7 cut(s) 903, 1289, 1513, 1533, 1602, 2027, 2450
BtgI CCRYGG 3 cut(s) 1809, 1971, 2055
BtsCI GGATG 4 cut(s) 573, 1512, 1967, 2462
BtsI GCAGTG 3 cut(s) 49, 625, 2234
BtsIMutI CAGTG 6 cut(s) 49, 625, 800, 2013, 2096, 2234
Cac8I GCNNGC 6 cut(s) 421, 901, 1163, 1170, 1978, 2400
CaiI CAGNNNCTG 2 cut(s) 413, 539
CfoI GCGC 4 cut(s) 93, 387, 2357, 2430
Cfr10I RCCGGY 1 cut(s) 2239
Cfr13I GGNCC 6 cut(s) 553, 578, 825, 902, 1531, 2060
CseI GACGC 2 cut(s) 1461, 1814
Csp6I GTAC 4 cut(s) 379, 404, 1150, 1988
CviAII CATG 7 cut(s) 382, 1375, 1543, 1810, 1972, 2275, 2413
CviQI GTAC 4 cut(s) 379, 404, 1150, 1988
DdeI CTNAG 7 cut(s) 102, 357, 447, 458, 525, 830, 1125
DinI GGCGCC 1 cut(s) 2429
DriI GACNNNNNGTC 1 cut(s) 1842
EaeI YGGCCR 2 cut(s) 1287, 2025
Eam1104I CTCTTC 2 cut(s) 1566, 2304
Eam1105I GACNNNNNGTC 1 cut(s) 1842
EarI CTCTTC 2 cut(s) 1566, 2304
EciI GGCGGA 1 cut(s) 2156
Eco130I CCWWGG 4 cut(s) 507, 1809, 1971, 2163
Eco24I GRGCYC 2 cut(s) 210, 1859
Eco31I GGTCTC 2 cut(s) 497, 650
Eco47I GGWCC 4 cut(s) 553, 578, 825, 2060
Eco57I CTGAAG 2 cut(s) 1293, 2285
Eco88I CYCGRG 1 cut(s) 633
EcoNI CCTNNNNNAGG 1 cut(s) 524
EcoRI GAATTC 1 cut(s) 1888
EcoRII CCWGG 5 cut(s) 562, 574, 1404, 1501, 2259
EcoT14I CCWWGG 4 cut(s) 507, 1809, 1971, 2163
EcoT22I ATGCAT 1 cut(s) 1498
EcoT38I GRGCYC 2 cut(s) 210, 1859
EgeI GGCGCC 1 cut(s) 2429
EheI GGCGCC 1 cut(s) 2429
ErhI CCWWGG 4 cut(s) 507, 1809, 1971, 2163
Esp3I CGTCTC 1 cut(s) 1124
FaeI CATG 7 cut(s) 385, 1378, 1546, 1813, 1975, 2278, 2416
FaqI GGGAC 6 cut(s) 126, 722, 772, 1376, 1652, 2073
FatI CATG 7 cut(s) 381, 1374, 1542, 1809, 1971, 2274, 2412
FauNDI CATATG 3 cut(s) 787, 1492, 2440
FbaI TGATCA 1 cut(s) 1254
FblI GTMKAC 1 cut(s) 1951
FokI GGATG 4 cut(s) 580, 1519, 1954, 2469
FriOI GRGCYC 2 cut(s) 210, 1859
FspBI CTAG 2 cut(s) 951, 1580
GlaI GCGC 4 cut(s) 92, 386, 2356, 2429
GsaI CCCAGC 3 cut(s) 1400, 2079, 2406
GsuI CTGGAG 4 cut(s) 1899, 2067, 2300, 2493
HaeII RGCGCY 1 cut(s) 2431
HaeIII GGCC 7 cut(s) 903, 1289, 1513, 1533, 1602, 2027, 2450
HapII CCGG 3 cut(s) 581, 706, 2240
HgaI GACGC 2 cut(s) 1461, 1814
HhaI GCGC 4 cut(s) 93, 387, 2357, 2430
Hin1I GRCGYC 3 cut(s) 1806, 1838, 2428
Hin1II CATG 7 cut(s) 385, 1378, 1546, 1813, 1975, 2278, 2416
Hin6I GCGC 4 cut(s) 91, 385, 2355, 2428
HinP1I GCGC 4 cut(s) 91, 385, 2355, 2428
HincII GTYRAC 3 cut(s) 289, 1006, 2418
HindII GTYRAC 3 cut(s) 289, 1006, 2418
HpaI GTTAAC 1 cut(s) 289
HpaII CCGG 3 cut(s) 581, 706, 2240
HphI GGTGA 3 cut(s) 1151, 2183, 2192
Hpy166II GTNNAC 8 cut(s) 289, 1006, 1150, 1524, 1952, 2339, 2418, 2515
Hpy8I GTNNAC 8 cut(s) 289, 1006, 1150, 1524, 1952, 2339, 2418, 2515
HpyAV CCTTC 5 cut(s) 156, 1592, 1936, 1948, 2512
HpyCH4III ACNGT 6 cut(s) 286, 403, 713, 972, 1154, 1262
HpyCH4IV ACGT 4 cut(s) 124, 1838, 2341, 2507
HpyF3I CTNAG 7 cut(s) 102, 357, 447, 458, 525, 830, 1125
HpySE526I ACGT 4 cut(s) 124, 1838, 2341, 2507
Hsp92I GRCGYC 3 cut(s) 1806, 1838, 2428
Hsp92II CATG 7 cut(s) 385, 1378, 1546, 1813, 1975, 2278, 2416
HspAI GCGC 4 cut(s) 91, 385, 2355, 2428
KasI GGCGCC 1 cut(s) 2427
Kpn2I TCCGGA 1 cut(s) 580
Ksp22I TGATCA 1 cut(s) 1254
KspAI GTTAAC 1 cut(s) 289
LguI GCTCTTC 1 cut(s) 2304
MaeI CTAG 2 cut(s) 951, 1580
MaeII ACGT 4 cut(s) 124, 1838, 2341, 2507
MaeIII GTNAC 5 cut(s) 436, 1106, 1553, 2171, 2232
MboII GAAGA 7 cut(s) 261, 679, 1286, 1583, 1631, 2291, 2489
MfeI CAATTG 2 cut(s) 170, 1716
MflI RGATCY 5 cut(s) 594, 678, 878, 1831, 2109
MhlI GDGCHC 2 cut(s) 210, 1859
MlsI TGGCCA 1 cut(s) 2027
MluCI AATT 8 cut(s) 170, 296, 1294, 1306, 1330, 1716, 1888, 2066
MluNI TGGCCA 1 cut(s) 2027
Mly113I GGCGCC 1 cut(s) 2428
MlyI GAGTC 4 cut(s) 275, 477, 2056, 2168
MmeI TCCRAC 3 cut(s) 695, 818, 1666
Mox20I TGGCCA 1 cut(s) 2027
Mph1103I ATGCAT 1 cut(s) 1498
MroI TCCGGA 1 cut(s) 580
MroXI GAANNNNTTC 2 cut(s) 945, 1587
MscI TGGCCA 1 cut(s) 2027
MseI TTAA 8 cut(s) 69, 288, 684, 1199, 1212, 1233, 1293, 1916
MslI CAYNNNNRTG 3 cut(s) 69, 1283, 2205
Msp20I TGGCCA 1 cut(s) 2027
MspA1I CMGCKG 3 cut(s) 1172, 1400, 2402
MspI CCGG 3 cut(s) 581, 706, 2240
MspR9I CCNGG 6 cut(s) 564, 576, 707, 1406, 1503, 2261
MunI CAATTG 2 cut(s) 170, 1716
Mva1269I GAATGC 2 cut(s) 451, 1684
MvaI CCWGG 5 cut(s) 564, 576, 1406, 1503, 2261
NarI GGCGCC 1 cut(s) 2428
NciI CCSGG 1 cut(s) 707
NcoI CCATGG 2 cut(s) 1809, 1971
NdeI CATATG 3 cut(s) 787, 1492, 2440
NlaIII CATG 7 cut(s) 385, 1378, 1546, 1813, 1975, 2278, 2416
NmeAIII GCCGAG 2 cut(s) 160, 174
NmuCI GTSAC 3 cut(s) 1553, 2171, 2232
NsiI ATGCAT 1 cut(s) 1498
NspI RCATGY 3 cut(s) 385, 2278, 2416
PaeR7I CTCGAG 1 cut(s) 633
PasI CCCWGGG 1 cut(s) 1502
PciSI GCTCTTC 1 cut(s) 2304
PctI GAATGC 2 cut(s) 451, 1684
PdmI GAANNNNTTC 2 cut(s) 945, 1587
PfeI GAWTC 9 cut(s) 74, 428, 584, 964, 1061, 1321, 1781, 1796, 2159
PflMI CCANNNNNTGG 1 cut(s) 2457
PfoI TCCNGGA 1 cut(s) 705
PleI GAGTC 4 cut(s) 274, 477, 2055, 2168
PluTI GGCGCC 1 cut(s) 2431
PpsI GAGTC 4 cut(s) 274, 477, 2055, 2168
PshBI ATTAAT 1 cut(s) 1199
PsiI TTATAA 1 cut(s) 1283
Psp6I CCWGG 5 cut(s) 562, 574, 1404, 1501, 2259
PspFI CCCAGC 3 cut(s) 1396, 2075, 2402
PspGI CCWGG 5 cut(s) 562, 574, 1404, 1501, 2259
PspPI GGNCC 6 cut(s) 553, 578, 825, 902, 1531, 2060
PspXI VCTCGAGB 1 cut(s) 633
PstI CTGCAG 3 cut(s) 282, 345, 2154
PstNI CAGNNNCTG 2 cut(s) 413, 539
PsuI RGATCY 5 cut(s) 594, 678, 878, 1831, 2109
PvuII CAGCTG 3 cut(s) 1172, 1400, 2402
RsaI GTAC 4 cut(s) 380, 405, 1151, 1989
RsaNI GTAC 4 cut(s) 379, 404, 1150, 1988
RseI CAYNNNNRTG 3 cut(s) 69, 1283, 2205
SapI GCTCTTC 1 cut(s) 2304
SaqAI TTAA 8 cut(s) 69, 288, 684, 1199, 1212, 1233, 1293, 1916
Sau96I GGNCC 6 cut(s) 553, 578, 825, 902, 1531, 2060
SchI GAGTC 4 cut(s) 275, 477, 2056, 2168
ScrFI CCNGG 6 cut(s) 564, 576, 707, 1406, 1503, 2261
SduI GDGCHC 2 cut(s) 210, 1859
SfcI CTRYAG 7 cut(s) 278, 341, 531, 762, 1952, 2122, 2150
SfoI GGCGCC 1 cut(s) 2429
Sfr274I CTCGAG 1 cut(s) 633
SinI GGWCC 4 cut(s) 553, 578, 825, 2060
SlaI CTCGAG 1 cut(s) 633
SmiMI CAYNNNNRTG 3 cut(s) 69, 1283, 2205
SmlI CTYRAG 4 cut(s) 633, 1019, 1417, 1614
SmoI CTYRAG 4 cut(s) 633, 1019, 1417, 1614
Sse9I AATT 8 cut(s) 170, 296, 1294, 1306, 1330, 1716, 1888, 2066
SsiI CCGC 6 cut(s) 238, 497, 1052, 1097, 1765, 2141
SspDI GGCGCC 1 cut(s) 2427
SspMI CTAG 2 cut(s) 951, 1580
StyD4I CCNGG 6 cut(s) 562, 574, 705, 1404, 1501, 2259
StyI CCWWGG 4 cut(s) 507, 1809, 1971, 2163
TaaI ACNGT 6 cut(s) 286, 403, 713, 972, 1154, 1262
TaiI ACGT 4 cut(s) 127, 1841, 2344, 2510
TaqI TCGA 9 cut(s) 247, 272, 337, 546, 634, 967, 1906, 1941, 2177
TasI AATT 8 cut(s) 170, 296, 1294, 1306, 1330, 1716, 1888, 2066
TatI WGTACW 1 cut(s) 1149
TauI GCSGC 1 cut(s) 1100
TfiI GAWTC 9 cut(s) 74, 428, 584, 964, 1061, 1321, 1781, 1796, 2159
Tru1I TTAA 8 cut(s) 69, 288, 684, 1199, 1212, 1233, 1293, 1916
Tru9I TTAA 8 cut(s) 69, 288, 684, 1199, 1212, 1233, 1293, 1916
TscAI CASTG 6 cut(s) 49, 625, 807, 2013, 2103, 2241
TseFI GTSAC 3 cut(s) 1553, 2171, 2232
Tsp45I GTSAC 3 cut(s) 1553, 2171, 2232
TspGWI ACGGA 3 cut(s) 1734, 2040, 2044
TspRI CASTG 6 cut(s) 49, 625, 807, 2013, 2103, 2241
Van91I CCANNNNNTGG 1 cut(s) 2457
VpaK11BI GGWCC 4 cut(s) 553, 578, 825, 2060
VspI ATTAAT 1 cut(s) 1199
XagI CCTNNNNNAGG 1 cut(s) 524
XapI RAATTY 2 cut(s) 1306, 1888
XceI RCATGY 3 cut(s) 385, 2278, 2416
XcmI CCANNNNNNNNNTGG 1 cut(s) 1849
XhoI CTCGAG 1 cut(s) 633
XmiI GTMKAC 1 cut(s) 1951
XmnI GAANNNNTTC 2 cut(s) 945, 1587
XspI CTAG 2 cut(s) 951, 1580
ZraI GACGTC 1 cut(s) 1839
Zsp2I ATGCAT 1 cut(s) 1498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.