Rorug06G0503300

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
61770950 .. 61771749
800 bp
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UTR
Exon/CDS
Intron
Rorug06G0503300.1

Sequence Viewer

Length: 189 bp
ATGGCTGAATTCTGTTCTCTCCTCCCGAATCTTACTCTTTGCCAAGACATATTGAAGCTGGAGAAGGTAGATACATGTCATTCTTCTTCTAAAACACCAAACTGGTGCGATAATTTTGGTTGCTGCACCAATACAATGCAGCCCAGCACTACAATTTTCACCAAGTGGCTGTTTCAAGAAGCTAGATAG

Protein Analysis

62

Amino Acids

7.09

Weight (kDa)

5.56

Isoelectric Point (pI)

33.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 8
AdeI CACNNNGTG 1 cut(s) 165
AflIII ACRYGT 1 cut(s) 74
AgsI TTSAA 2 cut(s) 55, 176
AluBI AGCT 2 cut(s) 58, 182
AluI AGCT 2 cut(s) 58, 182
ApeKI GCWGC 2 cut(s) 123, 139
ApoI RAATTY 1 cut(s) 8
AsuHPI GGTGA 1 cut(s) 151
BbvI GCAGC 2 cut(s) 110, 151
BfaI CTAG 1 cut(s) 183
BisI GCNGC 2 cut(s) 124, 140
BlsI GCNGC 2 cut(s) 125, 141
BpmI CTGGAG 1 cut(s) 80
Bse1I ACTGG 1 cut(s) 107
BseNI ACTGG 1 cut(s) 107
BseRI GAGGAG 1 cut(s) 11
BseXI GCAGC 2 cut(s) 110, 151
BseYI CCCAGC 1 cut(s) 143
BsgI GTGCAG 1 cut(s) 109
BsrI ACTGG 1 cut(s) 107
BstNSI RCATGY 1 cut(s) 78
BstV1I GCAGC 2 cut(s) 110, 151
CviAII CATG 1 cut(s) 75
CviJI RGCY 5 cut(s) 5, 58, 142, 169, 182
CviKI_1 RGCY 5 cut(s) 5, 58, 142, 169, 182
DraIII CACNNNGTG 1 cut(s) 165
EcoRI GAATTC 1 cut(s) 8
FaeI CATG 1 cut(s) 78
FaiI YATR 2 cut(s) 50, 76
FatI CATG 1 cut(s) 74
Fnu4HI GCNGC 2 cut(s) 124, 140
Fsp4HI GCNGC 2 cut(s) 124, 140
FspBI CTAG 1 cut(s) 183
GluI GCNGC 2 cut(s) 124, 140
GsaI CCCAGC 1 cut(s) 147
GsuI CTGGAG 1 cut(s) 80
Hin1II CATG 1 cut(s) 78
HinfI GANTC 1 cut(s) 28
HphI GGTGA 1 cut(s) 151
Hpy188III TCNNGA 2 cut(s) 25, 176
HpyAV CCTTC 1 cut(s) 58
HpyCH4V TGCA 2 cut(s) 126, 139
Hsp92II CATG 1 cut(s) 78
LpnPI CCDG 3 cut(s) 44, 88, 157
Lsp1109I GCAGC 2 cut(s) 110, 151
MaeI CTAG 1 cut(s) 183
MboII GAAGA 2 cut(s) 75, 78
MluCI AATT 3 cut(s) 8, 112, 153
MnlI CCTC 1 cut(s) 32
NlaIII CATG 1 cut(s) 78
NspI RCATGY 1 cut(s) 78
PciI ACATGT 1 cut(s) 74
PfeI GAWTC 1 cut(s) 28
PkrI GCNGC 2 cut(s) 125, 141
PscI ACATGT 1 cut(s) 74
PspFI CCCAGC 1 cut(s) 143
SatI GCNGC 2 cut(s) 124, 140
SetI ASST 3 cut(s) 60, 69, 184
SgeI CNNG 7 cut(s) 37, 56, 71, 87, 115, 156, 175
Sse9I AATT 3 cut(s) 8, 112, 153
SspMI CTAG 1 cut(s) 183
TasI AATT 3 cut(s) 8, 112, 153
TfiI GAWTC 1 cut(s) 28
TseI GCWGC 2 cut(s) 123, 139
XapI RAATTY 1 cut(s) 8
XceI RCATGY 1 cut(s) 78
XspI CTAG 1 cut(s) 183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.